Rh4AG158800

Histone-lysine n-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0002114
Physical Location & Seq
Forward (+)
40357625 .. 40372060
14436 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG158800.1

Sequence Viewer

Length: 3282 bp
ATGGCATTTCCCCTGAAGCATCGAAACGACGACGCCACCATCGACGTCGACACGGCCACGCCCCTCCGCTACCTCTCCCTCGACCACGTCTACTCCGCCACCTCCCCCTGCCGCGTCACCGCCAGCGGCTCCTCCAACGTCATGTCCAAGAAGGTCAAGGCTCGCAAGCTCAACCACTTTGAAAACGACGACGTTTCCGATCACAAGCCCCTTCCTCCTCCTCCGCCTCCTCCGCCGCCGCACAAGCCCGAGATTGTCCGTGTCTACTCGCGCCGCCGCGAAAAGAGGCCCCGCTCCTCCTCGTCCTTCTTCGACGGTCTCGTCGCTAGGGCACAGCCCAAGGCCGTCAAGGTGGAAGAGGTCGATGGGGATGAGTATGTGAGATTGCTGGAGAAGAAGAAGAAGAAGAGGAGGAAGTTCGGGAGTAGCGAGCTAGTCAAATTGGGGGTTGATTCTGATGTTCTGCGTACATTGGACGCGCCTCGATTGAGAGAGTGTCGCAGCAGCAATCAGAAACTTGAGAAATCGAAATCGAGCTCCAAGAAGCGCAATTCTTCTGTTAACGCCGATAAGGTTCCACCTTCCGTGAAGAGATGGGTCGGGTTGAGTTTCACCGGCGTTGATCCGAAAACTTATATTGGATTACAATGCAAGGTTTATTGGCCATTGGATGCTAATTCATATTCCGGTCGCGTCGTGGGATACAACTCTGACAGTACTAAGCATCATGTTGAATATGAAGATGGTGATGAGGAAGATTTGATTCTTTCAAACGAGAGAGTTAAGTTTTATATTTCTCGGGATGAAATGGAGAGTTTGAATTTGAGTGCCAGTCTCAAGAATCTGGACAGTGATGTGTATGATTATAATGAGATGGTTGTGCTAGCAGCGAGTTTGGATGACTGCCAGGAACTAGAGCCTGGGGATATCATCTGGGCCAAGCTTACTGGCTATGCTATGTGGCCAGCAATTGTTGTGGATGAATCACTTATTGGTGACCGTGAAGGCTTAAGTAAAACTTTGGTAGGAGGATCAGTTCCAGTGCAATTCTTTGGTACCCATGACTTTGCAAGGATTAAAGTGAAGCAGGCTATCTCATTTCTCAAAGGACTTCTTTCTTCATTCCATTTGAAGTGCAGGAAGTCTCGATTTATTAAAAGCTTGGAAGAAGCGAAAATGTATCTCAGTGAACAAAAGCTTCCTAGAAGAATGCTACGATTGCAAAAAGGAATAAACGTTGATGATTGTGAAAGTGAAAATGGTGAGGATGGAATGCGCACTGATTCAGGAGAAGGATGTCTGGATGATGTCATGATTCCAAGGTCGCTGGATTGCCTTGGAACTTCTGTGTTAGTGATGGGGGATCTGCAGATAATAAGACTAGGAAGGATTGTGAGGGAATCAAAATATTTTCAGGATGAGAGATACGTTTGGCCTGAAGGTTATACTGCAGTAAGGAAGTTTACTTCAATAACAGATCCGAGTGTATGTACCATGTATAAGATGGAGGTACTGAGAGATCCTGAATCAAAAATTCGACCTCTGTTCCAAGTCTCAATAGACACTGGAGAGCAGTTCAAGGGATCGACACCGTCGGCTTGCTGGGATAAAATATACAAAAGGATAAGGAAAATACAAAACAGTGCTCTTGATGATTCTGATGCTAATGCTGATGATGGATTAGAAAAGCTCTATAAATCTGGCTCTGAGATGTTTGGTTTCTCTAAACCTGAAGTTGCAAAACTTATACAGGGGTTATTAAAATCCAGCCATGCTTCAAAATTAGCCAAGTGCAAGTCAACCTCTAGAAGATATCGAGATGTTCCTGTTGGTTACAGACCAGTTCGTGTGGACTGGAAAGACCTTGATAAATGCAGTGTTTGCCACATGGATGAGGAGTACGAAAATAACCTGTTCCTGCAGTGTGACAAATGCAGAATGATGGTCCATGCAAGATGCTATGGAGAATTGGAACCTGTTGGTGGTGTTCTATGGTTATGCAACTTATGCCGGCCTGGAGCTCCTGAACCTCCACCACCTTGCTGCCTTTGTCCTGTAATAGGGGGTGCAATGAAGCCTACAACTGATGGGCGCTGGGCTCATTTGGCTTGCGCCATATGGATACCAGAAACTTGCCTATCTGATATCAAGAGAATGGAACCTATTGATGGGTTGAGCAGAATCAATAAGGATCGTTGGAAGCTGTTATGTAGTATCTGTGGTGTTTCTTATGGAGCTTGTATTCAATGTTCAAACCATACTTGTTATGCGGCATATCATCCACTTTGTGCACGAGCTGCTGGTCTTTGTGTTGAGCTCGAGGACGAAGAGAGACTGCATCTACTTTCAGTAGATGATGATGAAGAAGGCCAATGCATTCGCTTTCTTTCCTTTTGCAAGAAGCATAAGCAGCCATCTAATGACCGTTCAGCGGCTGGTGACCGGATTGGCCGAACTGTGCGCCAATGTTCAGACTACACCCCACCATCTAATCCATCTGGATGTGCTCGTACTGAGCCATACAATTACTCCTGTAGAAGAGGGAGAAAAGAACCTGAAGCAATAGCTGCTGCATCCTTAAAGCGTTTGTTTGTTGAGAACCAACCTTACTTAGTTGGTGGGTACAGCCAACACCAATTGTCAAGCAATCCACTGCCTCCCAATTGTGTTGTTGGCTCTAAGTTCAGCTCTAGGCTTCTGAGGCTGAAAGCTTCTCAACTTGATGCTCCTACCGATATACTTTCTATGGCTGAGAAGTATAAGTACATGAGGGATACTTTTCGAAAAAGACTAGCGTTTGGAAAATCGGGAATTCATGGATTTGGTATATTTGCGAAGCACCCACATAGAGCAGGGGACATGGTGATTGAATACACTGGTGAACTTGTCAGACCTCCTATAGCTGACAGGAGAGAGCGCTTCATATATAATTCATTGGTGGGGGCTGGGACTTATATGTTCCGGATTGATGATGAACGAGTCATTGATGCTACACGGGCCGGAAGCATTGCTCACCTGATCAATCACTCTTGTGAACCAAATTGCTACTCAAGAGTCATAAGTGTGAATTCTGACGAGCATATAATTATATTTGCAAAGAGAGACATTAAAAGATGGGAAGAACTTACATATGATTATAGATTTTTTTCAATCGATGAACAACTTGCATGTTATTGTGGTTTTCCAAGATGCCGGGGGGTTGTTAATGATGTTGACTCAGAAGAGCGAGGGACAAAGCTTTATGCGTCTCGCAGTGAATTAATAGATTGGACAGGAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000785 GO:0001067 GO:0003002 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005886 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008289 GO:0008757 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0009909 GO:0009987 GO:0010093 GO:0010314 GO:0010468 GO:0010556 GO:0016020 GO:0016043 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0022414 GO:0031323 GO:0031326 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0035091 GO:0036211 GO:0042054 GO:0042800 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043414 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0048367 GO:0048437 GO:0048444 GO:0048449 GO:0048518 GO:0048578 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048586 GO:0048608 GO:0048646 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0051276 GO:0051568 GO:0060255 GO:0061458 GO:0065007 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0097159 GO:0099402 GO:0140096 GO:1901363 GO:1901564 GO:1901981 GO:1903506 GO:1905392 GO:1905393 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000243 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FYRC FYRN PHD_2 PWWP SET zf-HC5HC2H_2

Protein Analysis

1093

Amino Acids

123.56

Weight (kDa)

8.44

Isoelectric Point (pI)

44.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTM_DIR17_Tudor PF21743 225 - 255 3e-07 PTM/DIR17-like, Tudor domain
PWWP PF00855 308 - 395 1.2e-15 PWWP domain
FYRN PF05964 451 - 506 3.6e-17 F/Y-rich N-terminus
FYRC PF05965 513 - 586 2.1e-11 F/Y rich C-terminus
PHD_2 PF13831 637 - 670 2.4e-06 PHD-finger
zf-HC5HC2H_2 PF13832 680 - 802 1.9e-32 PHD-zinc-finger like domain
zf-HC5HC2H PF13771 701 - 803 8.7e-20 PHD-like zinc-binding domain
SET PF00856 940 - 1046 7.8e-25 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 867
AasI GACNNNNNNGTC 1 cut(s) 320
AatII GACGTC 1 cut(s) 48
Acc16I TGCGCA 1 cut(s) 1277
Acc65I GGTACC 1 cut(s) 1055
AccB1I GGYRCC 1 cut(s) 1055
AccBSI CCGCTC 1 cut(s) 294
AccI GTMKAC 3 cut(s) 48, 90, 264
AccII CGCG 5 cut(s) 114, 271, 279, 479, 693
AccIII TCCGGA 1 cut(s) 2961
AclI AACGTT 1 cut(s) 1236
AclWI GGATC 7 cut(s) 617, 1039, 1371, 1472, 1514, 1591, 2199
AcoI YGGCCR 4 cut(s) 54, 662, 962, 2449
AcsI RAATTY 4 cut(s) 820, 1533, 2811, 3067
AcuI CTGAAG 4 cut(s) 35, 1458, 1752, 2577
AcyI GRCGYC 2 cut(s) 33, 45
AdeI CACNNNGTG 1 cut(s) 2288
AfaI GTAC 9 cut(s) 469, 718, 1057, 1492, 1512, 1901, 2512, 2624, 2765
AfeI AGCGCT 1 cut(s) 2918
AfiI CCNNNNNNNGG 4 cut(s) 1982, 2060, 2168, 2431
AflII CTTAAG 1 cut(s) 1009
AjiI CACGTC 1 cut(s) 88
AjnI CCWGG 3 cut(s) 906, 919, 2014
AjuI GAANNNNNNNTTGG 2 cut(s) 975, 1007
AleI CACNNNNGTG 1 cut(s) 3030
AloI GAACNNNNNNTCC 2 cut(s) 1020, 1052
Alw21I GWGCWC 6 cut(s) 539, 1648, 2023, 2293, 2319, 2509
Alw26I GTCTC 7 cut(s) 323, 839, 1149, 1558, 2326, 3096, 3252
Alw44I GTGCAC 1 cut(s) 2289
AlwI GGATC 7 cut(s) 617, 1039, 1371, 1472, 1514, 1591, 2199
AlwNI CAGNNNCTG 1 cut(s) 2435
Ama87I CYCGRG 3 cut(s) 248, 798, 2318
Aor13HI TCCGGA 1 cut(s) 2961
Aor51HI AGCGCT 1 cut(s) 2918
ApaLI GTGCAC 1 cut(s) 2289
ApeKI GCWGC 8 cut(s) 501, 504, 887, 2043, 2297, 2410, 2567, 2570
ApoI RAATTY 4 cut(s) 820, 1533, 2811, 3067
AseI ATTAAT 1 cut(s) 3260
Asp718I GGTACC 1 cut(s) 1055
AspLEI GCGC 8 cut(s) 273, 481, 549, 1278, 2094, 2114, 2463, 2919
AspS9I GGNCC 4 cut(s) 288, 936, 1945, 2997
AsuC2I CCSGG 1 cut(s) 3194
AsuHPI GGTGA 9 cut(s) 109, 604, 758, 1007, 1274, 2450, 2875, 2891, 3005
AsuII TTCGAA 1 cut(s) 2782
AsuNHI GCTAGC 1 cut(s) 883
AvaI CYCGRG 3 cut(s) 248, 798, 2318
AvaII GGWCC 1 cut(s) 1945
BaeGI GKGCMC 2 cut(s) 334, 2293
BalI TGGCCA 2 cut(s) 664, 964
BanI GGYRCC 1 cut(s) 1055
BanII GRGCYC 4 cut(s) 539, 2023, 2101, 2319
BarI GAAGNNNNNNTAC 2 cut(s) 2747, 2779
BauI CACGAG 1 cut(s) 2292
Bbv12I GWGCWC 6 cut(s) 539, 1648, 2023, 2293, 2319, 2509
BbvI GCAGC 8 cut(s) 513, 516, 899, 2030, 2284, 2422, 2554, 2557
BceAI ACGGC 2 cut(s) 69, 329
BciT130I CCWGG 3 cut(s) 908, 921, 2016
BciVI GTATCC 3 cut(s) 695, 2115, 2767
BclI TGATCA 1 cut(s) 3018
BcnI CCSGG 1 cut(s) 3194
BcoDI GTCTC 7 cut(s) 323, 839, 1149, 1558, 2326, 3096, 3252
BfaI CTAG 9 cut(s) 327, 434, 884, 914, 1203, 1382, 1806, 2691, 2792
BfmI CTRYAG 5 cut(s) 1367, 1449, 1919, 2533, 2898
BfoI RGCGCY 2 cut(s) 2095, 2920
BfrI CTTAAG 1 cut(s) 1009
BfuI GTATCC 3 cut(s) 695, 2115, 2767
BmcAI AGTACT 1 cut(s) 718
Bme1390I CCNGG 4 cut(s) 908, 921, 2016, 3194
Bme18I GGWCC 1 cut(s) 1945
BmeT110I CYCGRG 3 cut(s) 248, 798, 2318
BmgBI CACGTC 1 cut(s) 88
BmgT120I GGNCC 4 cut(s) 288, 936, 1945, 2997
BmiI GGNNCC 6 cut(s) 130, 290, 576, 1057, 1974, 2160
BmrFI CCNGG 4 cut(s) 908, 921, 2016, 3194
BmtI GCTAGC 1 cut(s) 887
BpmI CTGGAG 3 cut(s) 410, 1587, 2037
Bpu14I TTCGAA 1 cut(s) 2782
BpuEI CTTGAG 3 cut(s) 539, 821, 3034
BpuMI CCSGG 1 cut(s) 3194
Bsa29I ATCGAT 1 cut(s) 3153
BsaHI GRCGYC 2 cut(s) 33, 45
BsaI GGTCTC 1 cut(s) 323
BsaJI CCNNGG 5 cut(s) 339, 920, 1319, 1336, 3193
BsaWI WCCGGW 3 cut(s) 686, 2442, 2961
BsaXI ACNNNNNCTCC 6 cut(s) 77, 107, 1020, 1050, 2513, 2543
Bsc4I CCNNNNNNNGG 4 cut(s) 1982, 2060, 2168, 2431
Bse118I RCCGGY 2 cut(s) 614, 2010
Bse1I ACTGG 7 cut(s) 831, 952, 1040, 1570, 1841, 1859, 2881
Bse3DI GCAATG 2 cut(s) 2076, 3006
BseAI TCCGGA 1 cut(s) 2961
BseBI CCWGG 3 cut(s) 908, 921, 2016
BseCI ATCGAT 1 cut(s) 3153
BseDI CCNNGG 5 cut(s) 339, 920, 1319, 1336, 3193
BseLI CCNNNNNNNGG 4 cut(s) 1982, 2060, 2168, 2431
BseMI GCAATG 2 cut(s) 2076, 3006
BseMII CTCAG 7 cut(s) 1198, 1505, 1698, 2505, 2690, 2742, 3231
BseNI ACTGG 7 cut(s) 831, 952, 1040, 1570, 1841, 1859, 2881
BseRI GAGGAG 8 cut(s) 121, 207, 210, 219, 286, 289, 424, 1910
BseSI GKGCMC 2 cut(s) 334, 2293
BseXI GCAGC 8 cut(s) 513, 516, 899, 2030, 2284, 2422, 2554, 2557
BseYI CCCAGC 3 cut(s) 1602, 2094, 2945
BsgI GTGCAG 1 cut(s) 1156
Bsh1236I CGCG 5 cut(s) 114, 271, 279, 479, 693
Bsh1285I CGRYCG 1 cut(s) 691
BshNI GGYRCC 1 cut(s) 1055
BshVI ATCGAT 1 cut(s) 3153
BsiEI CGRYCG 1 cut(s) 691
BsiHKAI GWGCWC 6 cut(s) 539, 1648, 2023, 2293, 2319, 2509
BsiHKCI CYCGRG 3 cut(s) 248, 798, 2318
BsiSI CCGG 7 cut(s) 615, 687, 2011, 2443, 2962, 3000, 3193
BslFI GGGAC 3 cut(s) 2870, 2962, 3244
BslI CCNNNNNNNGG 4 cut(s) 1982, 2060, 2168, 2431
BsmAI GTCTC 7 cut(s) 323, 839, 1149, 1558, 2326, 3096, 3252
BsmBI CGTCTC 1 cut(s) 3252
BsmFI GGGAC 3 cut(s) 2870, 2962, 3244
BsmI GAATGC 3 cut(s) 1215, 1278, 2376
Bso31I GGTCTC 1 cut(s) 323
BsoBI CYCGRG 3 cut(s) 248, 798, 2318
Bsp119I TTCGAA 1 cut(s) 2782
Bsp1286I GDGCHC 8 cut(s) 334, 539, 1648, 2023, 2101, 2293, 2319, 2509
Bsp13I TCCGGA 1 cut(s) 2961
Bsp143I GATC 9 cut(s) 199, 622, 1031, 1363, 1477, 1519, 1583, 2191, 3018
BspCNI CTCAG 7 cut(s) 1197, 1506, 1699, 2506, 2691, 2743, 3230
BspDI ATCGAT 1 cut(s) 3153
BspEI TCCGGA 1 cut(s) 2961
BspFNI CGCG 5 cut(s) 114, 271, 279, 479, 693
BspHI TCATGA 1 cut(s) 1311
BspLI GGNNCC 6 cut(s) 130, 290, 576, 1057, 1974, 2160
BspMAI CTGCAG 3 cut(s) 1371, 1453, 1923
BspOI GCTAGC 1 cut(s) 887
BspPI GGATC 7 cut(s) 617, 1039, 1371, 1472, 1514, 1591, 2199
BspQI GCTCTTC 1 cut(s) 3216
BspT104I TTCGAA 1 cut(s) 2782
BspT107I GGYRCC 1 cut(s) 1055
BspTI CTTAAG 1 cut(s) 1009
BspTNI GGTCTC 1 cut(s) 323
BsrBI CCGCTC 1 cut(s) 294
BsrDI GCAATG 2 cut(s) 2076, 3006
BsrFI RCCGGY 2 cut(s) 614, 2010
BsrI ACTGG 7 cut(s) 831, 952, 1040, 1570, 1841, 1859, 2881
BssAI RCCGGY 2 cut(s) 614, 2010
BssECI CCNNGG 5 cut(s) 339, 920, 1319, 1336, 3193
BssMI GATC 9 cut(s) 199, 622, 1031, 1363, 1477, 1519, 1583, 2191, 3018
BssNI GRCGYC 2 cut(s) 33, 45
BssSI CACGAG 1 cut(s) 2292
BssT1I CCWWGG 3 cut(s) 339, 1319, 1336
Bst2BI CACGAG 1 cut(s) 2292
Bst2UI CCWGG 3 cut(s) 908, 921, 2016
Bst4CI ACNGT 8 cut(s) 317, 716, 851, 1001, 1593, 1643, 2426, 2458
Bst6I CTCTTC 6 cut(s) 351, 401, 584, 2322, 2533, 3216
BstACI GRCGYC 2 cut(s) 33, 45
BstAFI CTTAAG 1 cut(s) 1009
BstAPI GCANNNNNTGC 4 cut(s) 1881, 2007, 2297, 2567
BstBI TTCGAA 1 cut(s) 2782
BstEII GGTNACC 2 cut(s) 995, 2438
BstENI CCTNNNNNAGG 1 cut(s) 2058
BstFNI CGCG 5 cut(s) 114, 271, 279, 479, 693
BstH2I RGCGCY 2 cut(s) 2095, 2920
BstHHI GCGC 8 cut(s) 273, 481, 549, 1278, 2094, 2114, 2463, 2919
BstKTI GATC 9 cut(s) 202, 625, 1034, 1366, 1480, 1522, 1586, 2194, 3021
BstMAI GTCTC 7 cut(s) 323, 839, 1149, 1558, 2326, 3096, 3252
BstMBI GATC 9 cut(s) 199, 622, 1031, 1363, 1477, 1519, 1583, 2191, 3018
BstMCI CGRYCG 1 cut(s) 691
BstNI CCWGG 3 cut(s) 908, 921, 2016
BstNSI RCATGY 1 cut(s) 3171
BstPI GGTNACC 2 cut(s) 995, 2438
BstSCI CCNGG 4 cut(s) 906, 919, 2014, 3192
BstSFI CTRYAG 5 cut(s) 1367, 1449, 1919, 2533, 2898
BstSLI GKGCMC 2 cut(s) 334, 2293
BstUI CGCG 5 cut(s) 114, 271, 279, 479, 693
BstV1I GCAGC 8 cut(s) 513, 516, 899, 2030, 2284, 2422, 2554, 2557
BstX2I RGATCY 3 cut(s) 1363, 1477, 1519
BstYI RGATCY 3 cut(s) 1363, 1477, 1519
Bsu15I ATCGAT 1 cut(s) 3153
BsuI GTATCC 3 cut(s) 695, 2115, 2767
BsuTUI ATCGAT 1 cut(s) 3153
BtrI CACGTC 1 cut(s) 88
BtsI GCAGTG 4 cut(s) 1882, 1928, 2651, 3259
CaiI CAGNNNCTG 1 cut(s) 2435
CciI TCATGA 1 cut(s) 1311
CfoI GCGC 8 cut(s) 273, 481, 549, 1278, 2094, 2114, 2463, 2919
Cfr10I RCCGGY 2 cut(s) 614, 2010
Cfr13I GGNCC 4 cut(s) 288, 936, 1945, 2997
ClaI ATCGAT 1 cut(s) 3153
CseI GACGC 5 cut(s) 41, 103, 485, 682, 3234
Csp6I GTAC 9 cut(s) 468, 717, 1056, 1491, 1511, 1900, 2511, 2623, 2764
CspCI CAANNNNNGTGG 2 cut(s) 957, 992
CviQI GTAC 9 cut(s) 468, 717, 1056, 1491, 1511, 1900, 2511, 2623, 2764
DpnI GATC 9 cut(s) 201, 624, 1033, 1365, 1479, 1521, 1585, 2193, 3020
DpnII GATC 9 cut(s) 199, 622, 1031, 1363, 1477, 1519, 1583, 2191, 3018
DraIII CACNNNGTG 1 cut(s) 2288
DrdI GACNNNNNNGTC 1 cut(s) 320
DseDI GACNNNNNNGTC 1 cut(s) 320
EaeI YGGCCR 4 cut(s) 54, 662, 962, 2449
Eam1104I CTCTTC 6 cut(s) 351, 401, 584, 2322, 2533, 3216
EarI CTCTTC 6 cut(s) 351, 401, 584, 2322, 2533, 3216
EciI GGCGGA 3 cut(s) 85, 213, 222
Ecl136II GAGCTC 3 cut(s) 537, 2021, 2317
Eco130I CCWWGG 3 cut(s) 339, 1319, 1336
Eco24I GRGCYC 4 cut(s) 539, 2023, 2101, 2319
Eco31I GGTCTC 1 cut(s) 323
Eco32I GATATC 3 cut(s) 928, 1814, 2146
Eco47I GGWCC 1 cut(s) 1945
Eco47III AGCGCT 1 cut(s) 2918
Eco53kI GAGCTC 3 cut(s) 537, 2021, 2317
Eco57I CTGAAG 4 cut(s) 35, 1458, 1752, 2577
Eco88I CYCGRG 3 cut(s) 248, 798, 2318
Eco91I GGTNACC 2 cut(s) 995, 2438
EcoICRI GAGCTC 3 cut(s) 537, 2021, 2317
EcoNI CCTNNNNNAGG 1 cut(s) 2058
EcoO109I RGGNCCY 1 cut(s) 288
EcoO65I GGTNACC 2 cut(s) 995, 2438
EcoRI GAATTC 2 cut(s) 2811, 3067
EcoRII CCWGG 3 cut(s) 906, 919, 2014
EcoRV GATATC 3 cut(s) 928, 1814, 2146
EcoT14I CCWWGG 3 cut(s) 339, 1319, 1336
EcoT22I ATGCAT 1 cut(s) 2378
EcoT38I GRGCYC 4 cut(s) 539, 2023, 2101, 2319
ErhI CCWWGG 3 cut(s) 339, 1319, 1336
Esp3I CGTCTC 1 cut(s) 3252
FalI AAGNNNNNCTT 4 cut(s) 1003, 1035, 1098, 1130
FaqI GGGAC 3 cut(s) 2870, 2962, 3244
FauI CCCGC 1 cut(s) 299
FauNDI CATATG 2 cut(s) 2117, 3130
FbaI TGATCA 1 cut(s) 3018
FblI GTMKAC 3 cut(s) 48, 90, 264
FriOI GRGCYC 4 cut(s) 539, 2023, 2101, 2319
FspAI RTGCGCAY 1 cut(s) 1277
FspBI CTAG 9 cut(s) 327, 434, 884, 914, 1203, 1382, 1806, 2691, 2792
FspI TGCGCA 1 cut(s) 1277
GlaI GCGC 8 cut(s) 272, 480, 548, 1277, 2093, 2113, 2462, 2918
GsaI CCCAGC 3 cut(s) 1606, 2098, 2949
GsuI CTGGAG 3 cut(s) 410, 1587, 2037
HaeII RGCGCY 2 cut(s) 2095, 2920
HapII CCGG 7 cut(s) 615, 687, 2011, 2443, 2962, 3000, 3193
HgaI GACGC 5 cut(s) 41, 103, 485, 682, 3234
HhaI GCGC 8 cut(s) 273, 481, 549, 1278, 2094, 2114, 2463, 2919
Hin1I GRCGYC 2 cut(s) 33, 45
Hin6I GCGC 8 cut(s) 271, 479, 547, 1276, 2092, 2112, 2461, 2917
HinP1I GCGC 8 cut(s) 271, 479, 547, 1276, 2092, 2112, 2461, 2917
HincII GTYRAC 4 cut(s) 49, 562, 1800, 3214
HindII GTYRAC 4 cut(s) 49, 562, 1800, 3214
HindIII AAGCTT 5 cut(s) 941, 1159, 1196, 2709, 3236
HpaI GTTAAC 1 cut(s) 562
HpaII CCGG 7 cut(s) 615, 687, 2011, 2443, 2962, 3000, 3193
HphI GGTGA 9 cut(s) 109, 604, 758, 1007, 1274, 2450, 2875, 2891, 3005
HpyAV CCTTC 9 cut(s) 145, 221, 316, 591, 998, 1286, 1380, 1433, 2360
HpyCH4III ACNGT 8 cut(s) 317, 716, 851, 1001, 1593, 1643, 2426, 2458
HpyCH4IV ACGT 6 cut(s) 45, 87, 138, 192, 1236, 1428
HpySE526I ACGT 6 cut(s) 45, 87, 138, 192, 1236, 1428
Hsp92I GRCGYC 2 cut(s) 33, 45
HspAI GCGC 8 cut(s) 271, 479, 547, 1276, 2092, 2112, 2461, 2917
Kpn2I TCCGGA 1 cut(s) 2961
KpnI GGTACC 1 cut(s) 1059
KroI GCCGGC 1 cut(s) 2010
KroNI GCCGGC 1 cut(s) 2012
Ksp22I TGATCA 1 cut(s) 3018
KspAI GTTAAC 1 cut(s) 562
Kzo9I GATC 9 cut(s) 199, 622, 1031, 1363, 1477, 1519, 1583, 2191, 3018
LguI GCTCTTC 1 cut(s) 3216
LmnI GCTCC 7 cut(s) 134, 299, 542, 2018, 2026, 2234, 2731
Lsp1109I GCAGC 8 cut(s) 513, 516, 899, 2030, 2284, 2422, 2554, 2557
MaeI CTAG 9 cut(s) 327, 434, 884, 914, 1203, 1382, 1806, 2691, 2792
MaeII ACGT 6 cut(s) 45, 87, 138, 192, 1236, 1428
MaeIII GTNAC 5 cut(s) 115, 995, 1832, 1925, 2438
MalI GATC 9 cut(s) 201, 624, 1033, 1365, 1479, 1521, 1585, 2193, 3020
MbiI CCGCTC 1 cut(s) 294
MboI GATC 9 cut(s) 199, 622, 1031, 1363, 1477, 1519, 1583, 2191, 3018
MfeI CAATTG 3 cut(s) 969, 2636, 2662
MflI RGATCY 3 cut(s) 1363, 1477, 1519
MhlI GDGCHC 8 cut(s) 334, 539, 1648, 2023, 2101, 2293, 2319, 2509
MlsI TGGCCA 2 cut(s) 664, 964
MluNI TGGCCA 2 cut(s) 664, 964
MlyI GAGTC 3 cut(s) 2988, 3063, 3209
MmeI TCCRAC 2 cut(s) 159, 2177
Mox20I TGGCCA 2 cut(s) 664, 964
Mph1103I ATGCAT 1 cut(s) 2378
MroI TCCGGA 1 cut(s) 2961
MroNI GCCGGC 1 cut(s) 2010
MscI TGGCCA 2 cut(s) 664, 964
MslI CAYNNNNRTG 4 cut(s) 1890, 2500, 3030, 3062
Msp20I TGGCCA 2 cut(s) 664, 964
MspA1I CMGCKG 2 cut(s) 126, 2432
MspCI CTTAAG 1 cut(s) 1009
MspI CCGG 7 cut(s) 615, 687, 2011, 2443, 2962, 3000, 3193
MspR9I CCNGG 4 cut(s) 908, 921, 2016, 3194
MunI CAATTG 3 cut(s) 969, 2636, 2662
Mva1269I GAATGC 3 cut(s) 1215, 1278, 2376
MvaI CCWGG 3 cut(s) 908, 921, 2016
MvnI CGCG 5 cut(s) 114, 271, 279, 479, 693
NaeI GCCGGC 1 cut(s) 2012
NciI CCSGG 1 cut(s) 3194
NdeI CATATG 2 cut(s) 2117, 3130
NdeII GATC 9 cut(s) 199, 622, 1031, 1363, 1477, 1519, 1583, 2191, 3018
NgoMIV GCCGGC 1 cut(s) 2010
NheI GCTAGC 1 cut(s) 883
NlaIV GGNNCC 6 cut(s) 130, 290, 576, 1057, 1974, 2160
NmuCI GTSAC 4 cut(s) 115, 995, 1925, 2438
NsbI TGCGCA 1 cut(s) 1277
NsiI ATGCAT 1 cut(s) 2378
NspI RCATGY 1 cut(s) 3171
NspV TTCGAA 1 cut(s) 2782
OliI CACNNNNGTG 1 cut(s) 3030
PaeR7I CTCGAG 1 cut(s) 2318
PagI TCATGA 1 cut(s) 1311
PciSI GCTCTTC 1 cut(s) 3216
PcsI WCGNNNNNNNCGW 4 cut(s) 39, 195, 318, 426
PctI GAATGC 3 cut(s) 1215, 1278, 2376
PdiI GCCGGC 1 cut(s) 2012
PflFI GACNNNGTC 2 cut(s) 86, 1591
PleI GAGTC 3 cut(s) 2987, 3062, 3209
PpsI GAGTC 3 cut(s) 2987, 3062, 3209
PshBI ATTAAT 1 cut(s) 3260
PsiI TTATAA 1 cut(s) 867
Psp124BI GAGCTC 3 cut(s) 539, 2023, 2319
Psp1406I AACGTT 1 cut(s) 1236
Psp6I CCWGG 3 cut(s) 906, 919, 2014
PspEI GGTNACC 2 cut(s) 995, 2438
PspFI CCCAGC 3 cut(s) 1602, 2094, 2945
PspGI CCWGG 3 cut(s) 906, 919, 2014
PspN4I GGNNCC 6 cut(s) 130, 290, 576, 1057, 1974, 2160
PspPI GGNCC 4 cut(s) 288, 936, 1945, 2997
PspXI VCTCGAGB 1 cut(s) 2318
PsrI GAACNNNNNNTAC 4 cut(s) 2233, 2265, 2591, 2623
PstI CTGCAG 3 cut(s) 1371, 1453, 1923
PstNI CAGNNNCTG 1 cut(s) 2435
PsuI RGATCY 3 cut(s) 1363, 1477, 1519
PsyI GACNNNGTC 2 cut(s) 86, 1591
RsaI GTAC 9 cut(s) 469, 718, 1057, 1492, 1512, 1901, 2512, 2624, 2765
RsaNI GTAC 9 cut(s) 468, 717, 1056, 1491, 1511, 1900, 2511, 2623, 2764
RseI CAYNNNNRTG 4 cut(s) 1890, 2500, 3030, 3062
SacI GAGCTC 3 cut(s) 539, 2023, 2319
SalI GTCGAC 1 cut(s) 47
SapI GCTCTTC 1 cut(s) 3216
Sau3AI GATC 9 cut(s) 199, 622, 1031, 1363, 1477, 1519, 1583, 2191, 3018
Sau96I GGNCC 4 cut(s) 288, 936, 1945, 2997
ScaI AGTACT 1 cut(s) 718
SchI GAGTC 3 cut(s) 2988, 3063, 3209
ScrFI CCNGG 4 cut(s) 908, 921, 2016, 3194
SduI GDGCHC 8 cut(s) 334, 539, 1648, 2023, 2101, 2293, 2319, 2509
SfcI CTRYAG 5 cut(s) 1367, 1449, 1919, 2533, 2898
Sfr274I CTCGAG 1 cut(s) 2318
SfuI TTCGAA 1 cut(s) 2782
SgrAI CRCCGGYG 1 cut(s) 614
SinI GGWCC 1 cut(s) 1945
SlaI CTCGAG 1 cut(s) 2318
SmiMI CAYNNNNRTG 4 cut(s) 1890, 2500, 3030, 3062
SmlI CTYRAG 5 cut(s) 518, 836, 1009, 2318, 3049
SmoI CTYRAG 5 cut(s) 518, 836, 1009, 2318, 3049
SspI AATATT 1 cut(s) 1409
SspMI CTAG 9 cut(s) 327, 434, 884, 914, 1203, 1382, 1806, 2691, 2792
SstI GAGCTC 3 cut(s) 539, 2023, 2319
StyD4I CCNGG 4 cut(s) 906, 919, 2014, 3192
StyI CCWWGG 3 cut(s) 339, 1319, 1336
TaaI ACNGT 8 cut(s) 317, 716, 851, 1001, 1593, 1643, 2426, 2458
TaiI ACGT 6 cut(s) 48, 90, 141, 195, 1239, 1431
TatI WGTACW 2 cut(s) 716, 2763
TauI GCSGC 8 cut(s) 114, 129, 238, 241, 276, 279, 2273, 2435
TseFI GTSAC 4 cut(s) 115, 995, 1925, 2438
TseI GCWGC 8 cut(s) 501, 504, 887, 2043, 2297, 2410, 2567, 2570
Tsp45I GTSAC 4 cut(s) 115, 995, 1925, 2438
TspGWI ACGGA 2 cut(s) 248, 574
Tth111I GACNNNGTC 2 cut(s) 86, 1591
Vha464I CTTAAG 1 cut(s) 1009
VneI GTGCAC 1 cut(s) 2289
VpaK11BI GGWCC 1 cut(s) 1945
VspI ATTAAT 1 cut(s) 3260
XagI CCTNNNNNAGG 1 cut(s) 2058
XapI RAATTY 4 cut(s) 820, 1533, 2811, 3067
XbaI TCTAGA 1 cut(s) 1805
XceI RCATGY 1 cut(s) 3171
XcmI CCANNNNNNNNNTGG 1 cut(s) 1501
XhoI CTCGAG 1 cut(s) 2318
XmiI GTMKAC 3 cut(s) 48, 90, 264
XspI CTAG 9 cut(s) 327, 434, 884, 914, 1203, 1382, 1806, 2691, 2792
ZraI GACGTC 1 cut(s) 46
ZrmI AGTACT 1 cut(s) 718
Zsp2I ATGCAT 1 cut(s) 2378
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.