Rh4BG158200

Histone-lysine n-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0002114
Physical Location & Seq
Forward (+)
28522452 .. 28536698
14247 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG158200.1

Sequence Viewer

Length: 3285 bp
ATGGCATTTCCCCTGAAGCATCGAAACGACGACGCCACCATCGACGTCGACACGGCCACGCCCCTCCGCTACCTCTCCCTCGACCACGTCTATTCCGCCACCTCCCCTTGCCGCGTCACCGCCAGCGGCTCCTCCAACGTCATGTCCAAGAAGGTCAAGGCTCGCAAGCTCAACCACTTTGAAAACGACGACGTTTCCGATCACAAGCCCCTTCCTCCTCCTCCTCCGCCTCCTCCGCCGCCGCACAAGCCCGAGATTGTCCGTGTCTACTCCCGCCGCCGCGAGAAGAGGCCCCGCTCGTCGTCCTCCTTCTTCGACGGTCTCGTCGCTAGGGCACAGCCCAAGGCCGTCAAGGTTGAAGAGGTCGATGGGGATGAGTATGTGAGATTGCTGGAGAAGAAGAAGAAGAAGAGGAGGAAGTTCGGGAGTAGCGAGCTAGTCAAATTGGGGGTTGATTCTGATGTTCTGCGTACATTGGACGCGCCTCGATTGAGAGAGTGTCGCAGCAGCAATCAGAAACTTGAGAAATCGAAATCGAGCTCCAAGAAGCGCAATTCTTCTGTTAACGCCGATAAGGTTCCACCTTCCGTGAAGAGATGGGTTGGGTTGAGTTTCACCGGCGTTGATCCGAAAACTTTTATTGGATTACAATGCAAGGTTTATTGGCCATTGGATGCTAATTCATATTCCGGTCGCGTCGTGGGATACAACTCTGACAGTACTAAGCATCATGTTGAATATGAAGATGGTGATGAGGAAGATTTGATTCTTTCAAACGAGAGAGTTAAGTTTTATATTTCTCGGGATGAAATGGAGAGTTTGAATTTGAGTGCCAGTCTCAAGAATCTGGACAGTGATGTGTATGATTATAATGAGATGGTTGTGCTAGCAGCGAGTTTGGATGACTGCCAGGAACTAGAGCCTGGGGATATCATTTGGGCCAAGCTTACTGGCTATGCTATGTGGCCAGCAATTGTTGTGGATGAATCACTTATCGGTGACCGTGAAGGCTTAAGTAAAACTTTGGTAGGAGGATCAGTTCCAGTGCAATTCTTTGGTACCCATGACTTTGCAAGGATTAAAGTGAAGCAGGCTATCTCATTTCTCAAAGGACTTCTTTCTTCATTCCATTTGAAGTGCAGGAAGTCTCGATTTATTAAAAGCTTGGAAGAAGCAAAAATGTATCTCAGTGAACAAAAGCTTCCTAGAAGAATGCTACGATTGCAAAAAGGAATAAACGTTGATGATTGTGAAAGTGAAAATGGTGAGGATGGAATGCGCACTGATTCAGGAGAAGGATGTCTGGATGATGTCATGATTCCAAGGTCGCTGGATTGCCTTGGAACTTCTGTGTTAGTGATGGGGGATCTGCAGATAATAAGACTAGGAAGGATTGTGAGGGAATCAAAATATTTTCAGGATGAGAGATACGTTTGGCCTGAAGGTTATACTGCAGTAAGGAAGTTTACTTCAATAACAGATCCGAGTGTATGTACCATGTATAAGATGGAGGTACTGAGAGATCCTGAATCAAAAATTCGACCTCTGTTCCAAGTCTCAATAGACACTGGAGAGCAGTTCAAGGGATCGACACCGTCGGCTTGCTGGAATAAAATATACAAAAGGATAAGGAAAATACAAAACAGTGCTCTTGATGATTCTGATGCTAATGCTGATGATGGATTAGAAAAGCTCTATAAATCTGGCTCTGAGATGTTTGGTTTCTCTAAACCTGAAGTTGCAAAACTTATACAGGGGTTATTAAAATCCAGCCATTCTTCAAAATTAGCCAAGTGCAAGTCAACCTCTAGAAGATATCGAGATGTTCCTGTTGGTTACAGACCAGTTCGTGTGGACTGGAAAGACCTTGATAAATGCAGTGTTTGCCACATGGATGAGGAGTACGAAAATAACCTGTTCCTGCAGTGTGACAAATGCAGAATGATGGTTCATGCAAGATGCTATGGAGAATTGGAACCTGTTGGTGGTGTTCTATGGTTATGCAACTTATGCCGGCCTGGAGCTCCTGAACCTCCACCACCTTGCTGCCTTTGTCCTGTAATAGGGGGTGCAATGAAGCCTACAACTGATGGGCGCTGGGCTCATTTGGCTTGCGCCATATGGATACCAGAAACTTGCCTATCTGATATCAAGAGAATGGAACCTATTGATGGGTTGAGCAGAATCAATAAGGACCGTTGGAAGCTGTTATGTAGTATCTGTGGTGTTTCTTATGGAGCCTGTATTCAATGTTCAAACCATACTTGTTATGCGGCATATCATCCACTTTGTGCACGAGCTGCTGGTCTTTGTGTTGAGCTCGAGGACGAAGAGAGACTGCATCTACTTTCAGTAGATGATGATGAAGAAGGCCAATGCATTCGCTTTCTTTCCTTTTGCAAGAAGCATAAGCAGCCATCTAATGACCGTTCAGCAGCTGGTGACCGGATTGGCCGAACTGTGCGCCAATGTTCAGACTACACCCCACCATCTAATCTATCTGGATGTGCTCGTACTGAGCCATACAATTACTCCTGTAGAAGAGGGAGAAAAGAACCTGAAGCAATAGCTGCTGCATCCTTAAAGCGTCTGTTTGTTGAGAACCAACCTTACTTAGTTGGTGGGTACAGCCAACACCAATTGTCAAGCAATCCACTGCCTCCCAATTGTGTTGTTGGCTCTAAGTTCAGCTCTAGGCTTCTGAGGCTGAAAGCTTCTCAACTTGATGCTCCTACCGATATACTTTCTATGGCTGAGAAGTATAAGTACATGAGGGATACTTTTGGAAAAAGACTAGCGTTTGGAAAATCGGGAATTCATGGATTTGGTATATTTGCGAAGCACCCACATAGAGCAGGGGACATGGTGATTGAATACACTGGTGAACTTGTCAGACCTCCTATAGCTGACAGGAGAGAGCGCTTCATATATAATTCATTGGTGGGGGCGGGGACTTATATGTTCCGGATTGATGACGAACGAGTCATTGATGCTACACGGGCTGGAAGCATTGCTCACCTGATCAATCACTCTTGTGAACCAAATTGCTACTCAAGAGTCATAAGTGTGAATTCTGATGAGCATATAATTATATTTGCAAAGAGAGACATTAAAAGATGGGAAGAACTTACATATGATTATAGATTTTTTTCAATCGATGAACAACTTGCATGTTATTGTGGTTTTCCGAGATGCCGGGGGGTTGTTAATGATGTTGACTCAGAAGAGCGAGGGACAAAGCTTTATGCGTCTCGCAGTGAATTAATAGATTGGACAGGAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000785 GO:0001067 GO:0003002 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005886 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008289 GO:0008757 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0009909 GO:0009987 GO:0010093 GO:0010314 GO:0010468 GO:0010556 GO:0016020 GO:0016043 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0022414 GO:0031323 GO:0031326 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0035091 GO:0036211 GO:0042054 GO:0042800 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043414 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0048367 GO:0048437 GO:0048444 GO:0048449 GO:0048518 GO:0048578 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048586 GO:0048608 GO:0048646 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0051276 GO:0051568 GO:0060255 GO:0061458 GO:0065007 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0097159 GO:0099402 GO:0140096 GO:1901363 GO:1901564 GO:1901981 GO:1903506 GO:1905392 GO:1905393 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000243 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FYRC FYRN PHD_2 PWWP SET zf-HC5HC2H_2

Protein Analysis

1094

Amino Acids

123.58

Weight (kDa)

8.44

Isoelectric Point (pI)

44.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTM_DIR17_Tudor PF21743 226 - 256 3e-07 PTM/DIR17-like, Tudor domain
PWWP PF00855 309 - 396 1.2e-15 PWWP domain
FYRN PF05964 452 - 507 3.7e-17 F/Y-rich N-terminus
FYRC PF05965 514 - 587 1.6e-11 F/Y rich C-terminus
PHD_2 PF13831 638 - 671 2.4e-06 PHD-finger
zf-HC5HC2H_2 PF13832 681 - 803 1.9e-32 PHD-zinc-finger like domain
zf-HC5HC2H PF13771 702 - 804 8.7e-20 PHD-like zinc-binding domain
SET PF00856 941 - 1047 7.8e-25 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 870
AasI GACNNNNNNGTC 2 cut(s) 323, 2981
AatII GACGTC 1 cut(s) 48
Acc16I TGCGCA 1 cut(s) 1280
Acc65I GGTACC 1 cut(s) 1058
AccB1I GGYRCC 1 cut(s) 1058
AccBSI CCGCTC 1 cut(s) 297
AccI GTMKAC 2 cut(s) 48, 267
AccII CGCG 4 cut(s) 114, 282, 482, 696
AccIII TCCGGA 1 cut(s) 2964
AclI AACGTT 1 cut(s) 1239
AclWI GGATC 6 cut(s) 620, 1042, 1374, 1475, 1517, 1594
AcoI YGGCCR 4 cut(s) 54, 665, 965, 2452
AcsI RAATTY 4 cut(s) 823, 1536, 2814, 3070
AcuI CTGAAG 4 cut(s) 35, 1461, 1755, 2580
AcyI GRCGYC 2 cut(s) 33, 45
AdeI CACNNNGTG 1 cut(s) 2291
AfaI GTAC 9 cut(s) 472, 721, 1060, 1495, 1515, 1904, 2515, 2627, 2768
AfeI AGCGCT 1 cut(s) 2921
AfiI CCNNNNNNNGG 3 cut(s) 1985, 2063, 2171
AflII CTTAAG 1 cut(s) 1012
AjiI CACGTC 1 cut(s) 88
AjnI CCWGG 3 cut(s) 909, 922, 2017
AleI CACNNNNGTG 1 cut(s) 3033
AloI GAACNNNNNNTCC 2 cut(s) 1023, 1055
Alw21I GWGCWC 6 cut(s) 542, 1651, 2026, 2296, 2322, 2512
Alw26I GTCTC 7 cut(s) 326, 842, 1152, 1561, 2329, 3099, 3255
Alw44I GTGCAC 1 cut(s) 2292
AlwI GGATC 6 cut(s) 620, 1042, 1374, 1475, 1517, 1594
AlwNI CAGNNNCTG 1 cut(s) 2438
Ama87I CYCGRG 3 cut(s) 251, 801, 2321
Aor13HI TCCGGA 1 cut(s) 2964
Aor51HI AGCGCT 1 cut(s) 2921
ApaLI GTGCAC 1 cut(s) 2292
ApeKI GCWGC 9 cut(s) 504, 507, 890, 2046, 2300, 2413, 2435, 2570, 2573
ApoI RAATTY 4 cut(s) 823, 1536, 2814, 3070
AseI ATTAAT 1 cut(s) 3263
Asp718I GGTACC 1 cut(s) 1058
AspLEI GCGC 7 cut(s) 484, 552, 1281, 2097, 2117, 2466, 2922
AspS9I GGNCC 3 cut(s) 291, 939, 2194
AsuC2I CCSGG 1 cut(s) 3197
AsuHPI GGTGA 9 cut(s) 109, 607, 761, 1010, 1277, 2453, 2878, 2894, 3008
AsuNHI GCTAGC 1 cut(s) 886
AvaI CYCGRG 3 cut(s) 251, 801, 2321
AvaII GGWCC 1 cut(s) 2194
BaeGI GKGCMC 2 cut(s) 337, 2296
BalI TGGCCA 2 cut(s) 667, 967
BanI GGYRCC 1 cut(s) 1058
BanII GRGCYC 4 cut(s) 542, 2026, 2104, 2322
BarI GAAGNNNNNNTAC 2 cut(s) 2750, 2782
BauI CACGAG 1 cut(s) 2295
Bbv12I GWGCWC 6 cut(s) 542, 1651, 2026, 2296, 2322, 2512
BbvI GCAGC 9 cut(s) 516, 519, 902, 2033, 2287, 2425, 2447, 2557, 2560
BceAI ACGGC 2 cut(s) 69, 332
BciT130I CCWGG 3 cut(s) 911, 924, 2019
BciVI GTATCC 3 cut(s) 698, 2118, 2770
BclI TGATCA 1 cut(s) 3021
BcnI CCSGG 1 cut(s) 3197
BcoDI GTCTC 7 cut(s) 326, 842, 1152, 1561, 2329, 3099, 3255
BfaI CTAG 9 cut(s) 330, 437, 887, 917, 1206, 1385, 1809, 2694, 2795
BfmI CTRYAG 5 cut(s) 1370, 1452, 1922, 2536, 2901
BfoI RGCGCY 2 cut(s) 2098, 2923
BfrI CTTAAG 1 cut(s) 1012
BfuI GTATCC 3 cut(s) 698, 2118, 2770
BmcAI AGTACT 1 cut(s) 721
Bme1390I CCNGG 4 cut(s) 911, 924, 2019, 3197
Bme18I GGWCC 1 cut(s) 2194
BmeT110I CYCGRG 3 cut(s) 251, 801, 2321
BmgBI CACGTC 1 cut(s) 88
BmgT120I GGNCC 3 cut(s) 291, 939, 2194
BmiI GGNNCC 7 cut(s) 130, 293, 579, 1060, 1977, 2163, 2239
BmrFI CCNGG 4 cut(s) 911, 924, 2019, 3197
BmtI GCTAGC 1 cut(s) 890
BpmI CTGGAG 3 cut(s) 413, 1590, 2040
BpuEI CTTGAG 3 cut(s) 542, 824, 3037
BpuMI CCSGG 1 cut(s) 3197
Bsa29I ATCGAT 1 cut(s) 3156
BsaHI GRCGYC 2 cut(s) 33, 45
BsaI GGTCTC 1 cut(s) 326
BsaJI CCNNGG 5 cut(s) 342, 923, 1322, 1339, 3196
BsaWI WCCGGW 3 cut(s) 689, 2445, 2964
BsaXI ACNNNNNCTCC 4 cut(s) 1023, 1053, 2516, 2546
Bsc4I CCNNNNNNNGG 3 cut(s) 1985, 2063, 2171
Bse118I RCCGGY 2 cut(s) 617, 2013
Bse1I ACTGG 7 cut(s) 834, 955, 1043, 1573, 1844, 1862, 2884
Bse3DI GCAATG 2 cut(s) 2079, 3009
BseAI TCCGGA 1 cut(s) 2964
BseBI CCWGG 3 cut(s) 911, 924, 2019
BseCI ATCGAT 1 cut(s) 3156
BseDI CCNNGG 5 cut(s) 342, 923, 1322, 1339, 3196
BseLI CCNNNNNNNGG 3 cut(s) 1985, 2063, 2171
BseMI GCAATG 2 cut(s) 2079, 3009
BseMII CTCAG 7 cut(s) 1201, 1508, 1701, 2508, 2693, 2745, 3234
BseNI ACTGG 7 cut(s) 834, 955, 1043, 1573, 1844, 1862, 2884
BseRI GAGGAG 7 cut(s) 121, 207, 210, 213, 222, 427, 1913
BseSI GKGCMC 2 cut(s) 337, 2296
BseXI GCAGC 9 cut(s) 516, 519, 902, 2033, 2287, 2425, 2447, 2557, 2560
BseYI CCCAGC 1 cut(s) 2097
BsgI GTGCAG 1 cut(s) 1159
Bsh1236I CGCG 4 cut(s) 114, 282, 482, 696
Bsh1285I CGRYCG 1 cut(s) 694
BshNI GGYRCC 1 cut(s) 1058
BshVI ATCGAT 1 cut(s) 3156
BsiEI CGRYCG 1 cut(s) 694
BsiHKAI GWGCWC 6 cut(s) 542, 1651, 2026, 2296, 2322, 2512
BsiHKCI CYCGRG 3 cut(s) 251, 801, 2321
BsiSI CCGG 6 cut(s) 618, 690, 2014, 2446, 2965, 3196
BslFI GGGAC 3 cut(s) 2873, 2965, 3247
BslI CCNNNNNNNGG 3 cut(s) 1985, 2063, 2171
BsmAI GTCTC 7 cut(s) 326, 842, 1152, 1561, 2329, 3099, 3255
BsmBI CGTCTC 1 cut(s) 3255
BsmFI GGGAC 3 cut(s) 2873, 2965, 3247
BsmI GAATGC 3 cut(s) 1218, 1281, 2379
Bso31I GGTCTC 1 cut(s) 326
BsoBI CYCGRG 3 cut(s) 251, 801, 2321
Bsp1286I GDGCHC 8 cut(s) 337, 542, 1651, 2026, 2104, 2296, 2322, 2512
Bsp13I TCCGGA 1 cut(s) 2964
Bsp143I GATC 8 cut(s) 199, 625, 1034, 1366, 1480, 1522, 1586, 3021
BspCNI CTCAG 7 cut(s) 1200, 1509, 1702, 2509, 2694, 2746, 3233
BspDI ATCGAT 1 cut(s) 3156
BspEI TCCGGA 1 cut(s) 2964
BspFNI CGCG 4 cut(s) 114, 282, 482, 696
BspHI TCATGA 1 cut(s) 1314
BspLI GGNNCC 7 cut(s) 130, 293, 579, 1060, 1977, 2163, 2239
BspMAI CTGCAG 3 cut(s) 1374, 1456, 1926
BspOI GCTAGC 1 cut(s) 890
BspPI GGATC 6 cut(s) 620, 1042, 1374, 1475, 1517, 1594
BspQI GCTCTTC 1 cut(s) 3219
BspT107I GGYRCC 1 cut(s) 1058
BspTI CTTAAG 1 cut(s) 1012
BspTNI GGTCTC 1 cut(s) 326
BsrBI CCGCTC 1 cut(s) 297
BsrDI GCAATG 2 cut(s) 2079, 3009
BsrFI RCCGGY 2 cut(s) 617, 2013
BsrI ACTGG 7 cut(s) 834, 955, 1043, 1573, 1844, 1862, 2884
BssAI RCCGGY 2 cut(s) 617, 2013
BssECI CCNNGG 5 cut(s) 342, 923, 1322, 1339, 3196
BssMI GATC 8 cut(s) 199, 625, 1034, 1366, 1480, 1522, 1586, 3021
BssNI GRCGYC 2 cut(s) 33, 45
BssSI CACGAG 1 cut(s) 2295
BssT1I CCWWGG 3 cut(s) 342, 1322, 1339
Bst2BI CACGAG 1 cut(s) 2295
Bst2UI CCWGG 3 cut(s) 911, 924, 2019
Bst4CI ACNGT 9 cut(s) 320, 719, 854, 1004, 1596, 1646, 2198, 2429, 2461
Bst6I CTCTTC 7 cut(s) 281, 354, 404, 587, 2325, 2536, 3219
BstACI GRCGYC 2 cut(s) 33, 45
BstAFI CTTAAG 1 cut(s) 1012
BstAPI GCANNNNNTGC 4 cut(s) 1884, 2010, 2300, 2570
BstEII GGTNACC 2 cut(s) 998, 2441
BstENI CCTNNNNNAGG 1 cut(s) 2061
BstFNI CGCG 4 cut(s) 114, 282, 482, 696
BstH2I RGCGCY 2 cut(s) 2098, 2923
BstHHI GCGC 7 cut(s) 484, 552, 1281, 2097, 2117, 2466, 2922
BstKTI GATC 8 cut(s) 202, 628, 1037, 1369, 1483, 1525, 1589, 3024
BstMAI GTCTC 7 cut(s) 326, 842, 1152, 1561, 2329, 3099, 3255
BstMBI GATC 8 cut(s) 199, 625, 1034, 1366, 1480, 1522, 1586, 3021
BstMCI CGRYCG 1 cut(s) 694
BstNI CCWGG 3 cut(s) 911, 924, 2019
BstNSI RCATGY 1 cut(s) 3174
BstPI GGTNACC 2 cut(s) 998, 2441
BstSCI CCNGG 4 cut(s) 909, 922, 2017, 3195
BstSFI CTRYAG 5 cut(s) 1370, 1452, 1922, 2536, 2901
BstSLI GKGCMC 2 cut(s) 337, 2296
BstUI CGCG 4 cut(s) 114, 282, 482, 696
BstV1I GCAGC 9 cut(s) 516, 519, 902, 2033, 2287, 2425, 2447, 2557, 2560
BstX2I RGATCY 3 cut(s) 1366, 1480, 1522
BstYI RGATCY 3 cut(s) 1366, 1480, 1522
Bsu15I ATCGAT 1 cut(s) 3156
BsuI GTATCC 3 cut(s) 698, 2118, 2770
BsuTUI ATCGAT 1 cut(s) 3156
BtrI CACGTC 1 cut(s) 88
BtsI GCAGTG 4 cut(s) 1885, 1931, 2654, 3262
CaiI CAGNNNCTG 1 cut(s) 2438
CciI TCATGA 1 cut(s) 1314
CfoI GCGC 7 cut(s) 484, 552, 1281, 2097, 2117, 2466, 2922
Cfr10I RCCGGY 2 cut(s) 617, 2013
Cfr13I GGNCC 3 cut(s) 291, 939, 2194
ClaI ATCGAT 1 cut(s) 3156
CseI GACGC 6 cut(s) 41, 103, 488, 685, 2576, 3237
Csp6I GTAC 9 cut(s) 471, 720, 1059, 1494, 1514, 1903, 2514, 2626, 2767
CspCI CAANNNNNGTGG 2 cut(s) 960, 995
CviQI GTAC 9 cut(s) 471, 720, 1059, 1494, 1514, 1903, 2514, 2626, 2767
DpnI GATC 8 cut(s) 201, 627, 1036, 1368, 1482, 1524, 1588, 3023
DpnII GATC 8 cut(s) 199, 625, 1034, 1366, 1480, 1522, 1586, 3021
DraIII CACNNNGTG 1 cut(s) 2291
DrdI GACNNNNNNGTC 2 cut(s) 323, 2981
DseDI GACNNNNNNGTC 2 cut(s) 323, 2981
EaeI YGGCCR 4 cut(s) 54, 665, 965, 2452
Eam1104I CTCTTC 7 cut(s) 281, 354, 404, 587, 2325, 2536, 3219
EarI CTCTTC 7 cut(s) 281, 354, 404, 587, 2325, 2536, 3219
EciI GGCGGA 3 cut(s) 85, 216, 225
Ecl136II GAGCTC 3 cut(s) 540, 2024, 2320
Eco130I CCWWGG 3 cut(s) 342, 1322, 1339
Eco24I GRGCYC 4 cut(s) 542, 2026, 2104, 2322
Eco31I GGTCTC 1 cut(s) 326
Eco32I GATATC 3 cut(s) 931, 1817, 2149
Eco47I GGWCC 1 cut(s) 2194
Eco47III AGCGCT 1 cut(s) 2921
Eco53kI GAGCTC 3 cut(s) 540, 2024, 2320
Eco57I CTGAAG 4 cut(s) 35, 1461, 1755, 2580
Eco88I CYCGRG 3 cut(s) 251, 801, 2321
Eco91I GGTNACC 2 cut(s) 998, 2441
EcoICRI GAGCTC 3 cut(s) 540, 2024, 2320
EcoNI CCTNNNNNAGG 1 cut(s) 2061
EcoO109I RGGNCCY 1 cut(s) 291
EcoO65I GGTNACC 2 cut(s) 998, 2441
EcoRI GAATTC 2 cut(s) 2814, 3070
EcoRII CCWGG 3 cut(s) 909, 922, 2017
EcoRV GATATC 3 cut(s) 931, 1817, 2149
EcoT14I CCWWGG 3 cut(s) 342, 1322, 1339
EcoT22I ATGCAT 1 cut(s) 2381
EcoT38I GRGCYC 4 cut(s) 542, 2026, 2104, 2322
ErhI CCWWGG 3 cut(s) 342, 1322, 1339
Esp3I CGTCTC 1 cut(s) 3255
FalI AAGNNNNNCTT 4 cut(s) 1006, 1038, 1101, 1133
FaqI GGGAC 3 cut(s) 2873, 2965, 3247
FauI CCCGC 3 cut(s) 281, 302, 2941
FauNDI CATATG 2 cut(s) 2120, 3133
FbaI TGATCA 1 cut(s) 3021
FblI GTMKAC 2 cut(s) 48, 267
FriOI GRGCYC 4 cut(s) 542, 2026, 2104, 2322
FspAI RTGCGCAY 1 cut(s) 1280
FspBI CTAG 9 cut(s) 330, 437, 887, 917, 1206, 1385, 1809, 2694, 2795
FspI TGCGCA 1 cut(s) 1280
GlaI GCGC 7 cut(s) 483, 551, 1280, 2096, 2116, 2465, 2921
GsaI CCCAGC 1 cut(s) 2101
GsuI CTGGAG 3 cut(s) 413, 1590, 2040
HaeII RGCGCY 2 cut(s) 2098, 2923
HapII CCGG 6 cut(s) 618, 690, 2014, 2446, 2965, 3196
HgaI GACGC 6 cut(s) 41, 103, 488, 685, 2576, 3237
HhaI GCGC 7 cut(s) 484, 552, 1281, 2097, 2117, 2466, 2922
Hin1I GRCGYC 2 cut(s) 33, 45
Hin6I GCGC 7 cut(s) 482, 550, 1279, 2095, 2115, 2464, 2920
HinP1I GCGC 7 cut(s) 482, 550, 1279, 2095, 2115, 2464, 2920
HincII GTYRAC 4 cut(s) 49, 565, 1803, 3217
HindII GTYRAC 4 cut(s) 49, 565, 1803, 3217
HindIII AAGCTT 5 cut(s) 944, 1162, 1199, 2712, 3239
HpaI GTTAAC 1 cut(s) 565
HpaII CCGG 6 cut(s) 618, 690, 2014, 2446, 2965, 3196
HphI GGTGA 9 cut(s) 109, 607, 761, 1010, 1277, 2453, 2878, 2894, 3008
HpyAV CCTTC 9 cut(s) 145, 221, 319, 594, 1001, 1289, 1383, 1436, 2363
HpyCH4III ACNGT 9 cut(s) 320, 719, 854, 1004, 1596, 1646, 2198, 2429, 2461
HpyCH4IV ACGT 6 cut(s) 45, 87, 138, 192, 1239, 1431
HpySE526I ACGT 6 cut(s) 45, 87, 138, 192, 1239, 1431
Hsp92I GRCGYC 2 cut(s) 33, 45
HspAI GCGC 7 cut(s) 482, 550, 1279, 2095, 2115, 2464, 2920
Kpn2I TCCGGA 1 cut(s) 2964
KpnI GGTACC 1 cut(s) 1062
KroI GCCGGC 1 cut(s) 2013
KroNI GCCGGC 1 cut(s) 2015
Ksp22I TGATCA 1 cut(s) 3021
KspAI GTTAAC 1 cut(s) 565
Kzo9I GATC 8 cut(s) 199, 625, 1034, 1366, 1480, 1522, 1586, 3021
LguI GCTCTTC 1 cut(s) 3219
LmnI GCTCC 6 cut(s) 134, 545, 2021, 2029, 2237, 2734
Lsp1109I GCAGC 9 cut(s) 516, 519, 902, 2033, 2287, 2425, 2447, 2557, 2560
MaeI CTAG 9 cut(s) 330, 437, 887, 917, 1206, 1385, 1809, 2694, 2795
MaeII ACGT 6 cut(s) 45, 87, 138, 192, 1239, 1431
MaeIII GTNAC 5 cut(s) 115, 998, 1835, 1928, 2441
MalI GATC 8 cut(s) 201, 627, 1036, 1368, 1482, 1524, 1588, 3023
MbiI CCGCTC 1 cut(s) 297
MboI GATC 8 cut(s) 199, 625, 1034, 1366, 1480, 1522, 1586, 3021
MfeI CAATTG 3 cut(s) 972, 2639, 2665
MflI RGATCY 3 cut(s) 1366, 1480, 1522
MhlI GDGCHC 8 cut(s) 337, 542, 1651, 2026, 2104, 2296, 2322, 2512
MlsI TGGCCA 2 cut(s) 667, 967
MluNI TGGCCA 2 cut(s) 667, 967
MlyI GAGTC 3 cut(s) 2991, 3066, 3212
MmeI TCCRAC 2 cut(s) 159, 2180
Mox20I TGGCCA 2 cut(s) 667, 967
Mph1103I ATGCAT 1 cut(s) 2381
MroI TCCGGA 1 cut(s) 2964
MroNI GCCGGC 1 cut(s) 2013
MscI TGGCCA 2 cut(s) 667, 967
MslI CAYNNNNRTG 3 cut(s) 1893, 3033, 3065
Msp20I TGGCCA 2 cut(s) 667, 967
MspA1I CMGCKG 2 cut(s) 126, 2438
MspCI CTTAAG 1 cut(s) 1012
MspI CCGG 6 cut(s) 618, 690, 2014, 2446, 2965, 3196
MspR9I CCNGG 4 cut(s) 911, 924, 2019, 3197
MunI CAATTG 3 cut(s) 972, 2639, 2665
Mva1269I GAATGC 3 cut(s) 1218, 1281, 2379
MvaI CCWGG 3 cut(s) 911, 924, 2019
MvnI CGCG 4 cut(s) 114, 282, 482, 696
NaeI GCCGGC 1 cut(s) 2015
NciI CCSGG 1 cut(s) 3197
NdeI CATATG 2 cut(s) 2120, 3133
NdeII GATC 8 cut(s) 199, 625, 1034, 1366, 1480, 1522, 1586, 3021
NgoMIV GCCGGC 1 cut(s) 2013
NheI GCTAGC 1 cut(s) 886
NlaIV GGNNCC 7 cut(s) 130, 293, 579, 1060, 1977, 2163, 2239
NmuCI GTSAC 4 cut(s) 115, 998, 1928, 2441
NsbI TGCGCA 1 cut(s) 1280
NsiI ATGCAT 1 cut(s) 2381
NspI RCATGY 1 cut(s) 3174
OliI CACNNNNGTG 1 cut(s) 3033
PaeR7I CTCGAG 1 cut(s) 2321
PagI TCATGA 1 cut(s) 1314
PciSI GCTCTTC 1 cut(s) 3219
PcsI WCGNNNNNNNCGW 4 cut(s) 39, 195, 321, 429
PctI GAATGC 3 cut(s) 1218, 1281, 2379
PdiI GCCGGC 1 cut(s) 2015
PflFI GACNNNGTC 2 cut(s) 86, 1594
PleI GAGTC 3 cut(s) 2990, 3065, 3212
PpsI GAGTC 3 cut(s) 2990, 3065, 3212
PshBI ATTAAT 1 cut(s) 3263
PsiI TTATAA 1 cut(s) 870
Psp124BI GAGCTC 3 cut(s) 542, 2026, 2322
Psp1406I AACGTT 1 cut(s) 1239
Psp6I CCWGG 3 cut(s) 909, 922, 2017
PspEI GGTNACC 2 cut(s) 998, 2441
PspFI CCCAGC 1 cut(s) 2097
PspGI CCWGG 3 cut(s) 909, 922, 2017
PspN4I GGNNCC 7 cut(s) 130, 293, 579, 1060, 1977, 2163, 2239
PspPI GGNCC 3 cut(s) 291, 939, 2194
PspXI VCTCGAGB 1 cut(s) 2321
PsrI GAACNNNNNNTAC 4 cut(s) 2236, 2268, 2594, 2626
PstI CTGCAG 3 cut(s) 1374, 1456, 1926
PstNI CAGNNNCTG 1 cut(s) 2438
PsuI RGATCY 3 cut(s) 1366, 1480, 1522
PsyI GACNNNGTC 2 cut(s) 86, 1594
PvuII CAGCTG 1 cut(s) 2438
RsaI GTAC 9 cut(s) 472, 721, 1060, 1495, 1515, 1904, 2515, 2627, 2768
RsaNI GTAC 9 cut(s) 471, 720, 1059, 1494, 1514, 1903, 2514, 2626, 2767
RseI CAYNNNNRTG 3 cut(s) 1893, 3033, 3065
SacI GAGCTC 3 cut(s) 542, 2026, 2322
SalI GTCGAC 1 cut(s) 47
SapI GCTCTTC 1 cut(s) 3219
Sau3AI GATC 8 cut(s) 199, 625, 1034, 1366, 1480, 1522, 1586, 3021
Sau96I GGNCC 3 cut(s) 291, 939, 2194
ScaI AGTACT 1 cut(s) 721
SchI GAGTC 3 cut(s) 2991, 3066, 3212
ScrFI CCNGG 4 cut(s) 911, 924, 2019, 3197
SduI GDGCHC 8 cut(s) 337, 542, 1651, 2026, 2104, 2296, 2322, 2512
SfcI CTRYAG 5 cut(s) 1370, 1452, 1922, 2536, 2901
Sfr274I CTCGAG 1 cut(s) 2321
SgrAI CRCCGGYG 1 cut(s) 617
SinI GGWCC 1 cut(s) 2194
SlaI CTCGAG 1 cut(s) 2321
SmiMI CAYNNNNRTG 3 cut(s) 1893, 3033, 3065
SmlI CTYRAG 5 cut(s) 521, 839, 1012, 2321, 3052
SmoI CTYRAG 5 cut(s) 521, 839, 1012, 2321, 3052
SspI AATATT 1 cut(s) 1412
SspMI CTAG 9 cut(s) 330, 437, 887, 917, 1206, 1385, 1809, 2694, 2795
SstI GAGCTC 3 cut(s) 542, 2026, 2322
StyD4I CCNGG 4 cut(s) 909, 922, 2017, 3195
StyI CCWWGG 3 cut(s) 342, 1322, 1339
TaaI ACNGT 9 cut(s) 320, 719, 854, 1004, 1596, 1646, 2198, 2429, 2461
TaiI ACGT 6 cut(s) 48, 90, 141, 195, 1242, 1434
TatI WGTACW 2 cut(s) 719, 2766
TauI GCSGC 7 cut(s) 114, 129, 241, 244, 279, 282, 2276
TseFI GTSAC 4 cut(s) 115, 998, 1928, 2441
TseI GCWGC 9 cut(s) 504, 507, 890, 2046, 2300, 2413, 2435, 2570, 2573
Tsp45I GTSAC 4 cut(s) 115, 998, 1928, 2441
TspGWI ACGGA 2 cut(s) 251, 577
Tth111I GACNNNGTC 2 cut(s) 86, 1594
Vha464I CTTAAG 1 cut(s) 1012
VneI GTGCAC 1 cut(s) 2292
VpaK11BI GGWCC 1 cut(s) 2194
VspI ATTAAT 1 cut(s) 3263
XagI CCTNNNNNAGG 1 cut(s) 2061
XapI RAATTY 4 cut(s) 823, 1536, 2814, 3070
XbaI TCTAGA 1 cut(s) 1808
XceI RCATGY 1 cut(s) 3174
XcmI CCANNNNNNNNNTGG 1 cut(s) 1504
XhoI CTCGAG 1 cut(s) 2321
XmiI GTMKAC 2 cut(s) 48, 267
XspI CTAG 9 cut(s) 330, 437, 887, 917, 1206, 1385, 1809, 2694, 2795
ZraI GACGTC 1 cut(s) 46
ZrmI AGTACT 1 cut(s) 721
Zsp2I ATGCAT 1 cut(s) 2381
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.