FvH4_4g12210

Histone-lysine n-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0002114
Physical Location & Seq
Forward (+)
15897418 .. 15912365
14948 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g12210.t14

Sequence Viewer

Length: 3273 bp
ATGGCATTTCCCCTCACGCAGCGAAACGACGACGTCCCCATCGACGTCGACACCGCCGCCGTCGCGCCCATCCGCTACCTCTCCCTCGACCACGTCTACTCCGCCACCTCCCCCTGCGTCAGCGCCAGCGGCTCCTCCAACGTCATGTCCAAGAAGGTCAAGGCTCGCAAGCTCAACCACTTCGATTCCGACGACGTCTCCGATCACCACCACCACCACAAGCCGCTTCCTCCTCCTCCTCCGCCGCCGCCGGAGCACAAGCCCGAGGTTGTCCTCGTCTATTCGCGCCGCGAGAAGCGGCCGCGCCACTCGTTCTTCGACGCTCTGGTCGCTAGGGCACAGCCCAAGGCCGTCAAGGTTGAGGCGGTGGATGAGGACGAGTATGTGAGATTGAAGAAGAAGAGGAAGGAGAGCAAGTTCGGGAGTAGCGAGCTAGTGAAATTGGGGGTGGATTCTAATGTCTTGCTTGCACTGAGCGCTCCGCCGCGGTTGAGAGAGTGTCGCGTTAGCAATCAGAAGCCTGAGAAATCGAGCTCCAAGAAGCGTAATTCTTCTGTCAAAGCCGAGAAAGTTCCACCTTCCGTGAAGCGATGGGTCGGGTTGAGCTTCAGCGGAGTTGATCCGAAAACCTTTATTGGATTACAATGCAAGGTTTACTGGCCATTGGATGCTAATTCATATAGCGGTCGCATTGTGGGATACAACTCCGACAGTAATAAGCATCATGTTGAATATGAAGACGGTGACGAGGAAGATTTGGTTATTTCAAACGAGAAAGTCAAGTTTTATATTTCTCGGGAAGAAATGGAGAGTTTGAATTTGAGTTGCAGTCTCAAGAATATGGACAGTGATGTGTATGATTATAATGAGATGGTCGTATTAGCAGCGAGTTTGGATGACTGCCAGGAACTAGAGCCTGGGGATATCATATGGGCCAAGCTTACTGGCTATGCTATGTGGCCAGCAATTGTTGTAGATGAATCACTTATTGGTGACCGTGAAGGCTTAAGTAAAACTTCGGTAGGAGGATCAGTTCCAGTTCAATTCTTTGGTACCCATGACTTTGCAAGGATAAAAGTGAAGCAGGCTATTTCATTTCTCAAAGGACTTCTTTCATCATTCCATTTGAAGTGCAGGAAGTCTCGATTTCTTAAAAGCCTGGAAGAAGCGAAAATGTATCTCAGTGAACAAAAGCTTCCAAGAAGAATGCTACGACTGCAAAAAGGAATTAACATTGATGATTGTGAAAGTGAAAGTGGTGAGGATGAGATGCGCACTGATTCAGGAGATGGATGTCTGGATGATGTCATGATTCCAAGGTCGCTGGATTTCCCTGGAACTTCTGTGTTAGTGATGGGGGATCTGCAGATAATAAGACTAGGAAGGATTGTCAGGGACTCAAAATTTTTTCAAGACGAGAGAGATGTTTGGCCTGAAGGTTATACTGCTGTAAGAAAGTTTTCTTCAGTAACAGATCCAAGTATATGTACCTTGTATAAGATGGAGGTATTGAGAGATCCGGAATCAAAAATTCGACCTCTGTTCCAAGTCTCATTAGACAATGGAGAGCAGTTCAAGGGATCGACACCATCCGCTTGCTGGAATAAAATATACAAAAGGATAAGGAAAATTCAAAATAGTGCTCTTGATGATTCTAATGCTAATGCTGAAGATGGATTTGAGAAGATCTATAAATCTGGCTCTGAGATGTTTGGTTTCTCAGAACCTGAAGTTGCAAAACTTATACAGGGGTTATTAAAATCCAGCCATGCTTCAAAAGTAGACAAGTGCAAGTCAGCCTCTAGAAGACATCGAGATGTACCTGTTGGTTACAGGCCAGTTCGTGTTGACTGGAAAGACCTTGATAAATGCAGTGTTTGCCACATGGATGAGGAGTATGAAAATAACTTGTTCCTGCAGTGTGACAAATGCAGAATGATGGTCCATGCAAGATGCTATGGGGAGTTAGAACCTGTTGGTGGTGTTCTATGGTTATGCAACTTATGCCGGCCTGGAGCTCCTGAACCTCCACCGCCTTGCTGCCTATGTCCTGTAATAGGGGGTGCAATGAAGCCTACAACTGATGGGCGCTGGGCTCATCTGGCCTGTGCCATATGGATACCAGAAACTTGCCTATCTGATATCAAGAGAATGGAACCTATTGATGGTTTGAGCAGAATCAATAAGGACCGTTGGAAGCTGTTATGTAGTATATGTGGTGTTTCTTATGGCGCCTGTATTCAATGTTCAAACCATACTTGTTATGCCGCATATCATCCACTTTGTGCACGCGCTGCTGGTCTTTGTGTTGAGCTCGAGGATGAAGAGAGACTGCATCTTCTTTCAGTAGATGATGATGAAGAAGGTCAATGCATTCGTTTCCTTTCCTTTTGCAAGAAGCATAAGCAGCCATCTAATGACCGTTCAATGGCTGGTGACCGCATTGGTCGAACTGTGCGTCGATGTTCAGACTACAGCCCACCATCTAATCCATCTGGATGTGCTCGTACTGAGCCCTACAATTACTCTTGTAGAAGAGGGAGAAAAGAACCTGAAGCAATAGCTGCTGCATCCTTAAAGCGTTTGTTTGTTGAGAACCAACCTTACTTAGTTGGTGGGTACAGCCAACACCAATTGTCAAGCAACCCACTGCCTCCCAATGGTGTTGTTGGCTCAAAGTTCAGCTCTAGGCTTGAGAGGCTGAAAGCTTCTCAACTTGATGCTCCTACCGATATACTTTCTATGGCTGAGAAGTATAAGTACATGAGGGATACTTTTCGGAAAAGACTAGCGTTTGGAAAATCAGGAATTCATGGGTTTGGTATATTTGCGAAGCACCCACATAGAGCGGGCGACATGGTGATTGAATACACTGGTGAACTTGTCAGACCTCCTATAGCTGACAGGAGAGAGCGATTCATATATAATTCATTGGTGGGGGCTGGGACTTATATGTTCCGGATTGATGATGAACGAGTCATTGATGCCACACGGGCTGGAAGTGTTGCTCACCTGATCAATCATTCTTGTGAGCCGAATTGCTACTCAAGAGTCATAAGTGTGAATTCAGATGAGCACATAATTATTTTTGCAAAGAGAGACATTAAAAGATGGGAAGAACTTACATATGATTACAGATTCTTTTCAATCGATGAACAACTTGCATGTTATTGTGGTTTTCCGAGATGCCGGGGGGTGGTTAACGATGTGGAAGAGCGAGGGACAAAGCTTTATGCGCCTCGCAGTGAATTAATAGATTGGACAGGAGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000785 GO:0001067 GO:0003002 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005886 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008289 GO:0008757 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0009909 GO:0009987 GO:0010093 GO:0010314 GO:0010468 GO:0010556 GO:0016020 GO:0016043 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0022414 GO:0031323 GO:0031326 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0035091 GO:0036211 GO:0042054 GO:0042800 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043414 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0048367 GO:0048437 GO:0048444 GO:0048449 GO:0048518 GO:0048578 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048586 GO:0048608 GO:0048646 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0051276 GO:0051568 GO:0060255 GO:0061458 GO:0065007 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0097159 GO:0099402 GO:0140096 GO:1901363 GO:1901564 GO:1901981 GO:1903506 GO:1905392 GO:1905393 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000243 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FYRC FYRN PHD_2 PWWP SET zf-HC5HC2H_2

Protein Analysis

1091

Amino Acids

123.07

Weight (kDa)

7.96

Isoelectric Point (pI)

45.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PHD_2 PF13831 8 - 41 8.7e-07 PHD-finger
zf-HC5HC2H_2 PF13832 51 - 173 5e-33 PHD-zinc-finger like domain
zf-HC5HC2H PF13771 72 - 174 2.4e-20 PHD-like zinc-binding domain
SET PF00856 311 - 417 2.1e-25 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 864
AasI GACNNNNNNGTC 1 cut(s) 326
AatII GACGTC 3 cut(s) 36, 48, 198
Acc16I TGCGCA 1 cut(s) 1274
Acc65I GGTACC 1 cut(s) 1052
AccB1I GGYRCC 2 cut(s) 1052, 2231
AccBSI CCGCTC 1 cut(s) 2849
AccI GTMKAC 3 cut(s) 48, 96, 1782
AccII CGCG 7 cut(s) 65, 286, 291, 304, 487, 504, 2292
AccIII TCCGGA 2 cut(s) 1519, 2958
AclWI GGATC 6 cut(s) 614, 1036, 1368, 1469, 1511, 1588
AcoI YGGCCR 3 cut(s) 299, 659, 959
AcsI RAATTY 6 cut(s) 817, 1403, 1530, 1629, 2808, 3064
AcuI CTGAAG 6 cut(s) 592, 1449, 1455, 1689, 1749, 2574
AcyI GRCGYC 4 cut(s) 33, 45, 195, 2232
AdeI CACNNNGTG 1 cut(s) 2285
AfaI GTAC 6 cut(s) 1054, 1489, 1821, 2509, 2621, 2762
AfeI AGCGCT 1 cut(s) 478
AfiI CCNNNNNNNGG 7 cut(s) 1599, 1979, 2057, 2165, 2428, 2660, 3196
AflII CTTAAG 1 cut(s) 1006
AjiI CACGTC 1 cut(s) 94
AjnI CCWGG 5 cut(s) 903, 916, 1158, 1333, 2011
AjuI GAANNNNNNNTTGG 2 cut(s) 972, 1004
AloI GAACNNNNNNTCC 4 cut(s) 401, 433, 1017, 1049
Alw21I GWGCWC 8 cut(s) 258, 536, 1645, 2020, 2290, 2316, 2506, 3078
Alw26I GTCTC 6 cut(s) 202, 836, 1146, 1555, 2323, 3093
Alw44I GTGCAC 1 cut(s) 2286
AlwI GGATC 6 cut(s) 614, 1036, 1368, 1469, 1511, 1588
AlwNI CAGNNNCTG 1 cut(s) 1727
Ama87I CYCGRG 3 cut(s) 263, 795, 2315
Aor13HI TCCGGA 2 cut(s) 1519, 2958
Aor51HI AGCGCT 1 cut(s) 478
AoxI GGCC 9 cut(s) 299, 348, 659, 933, 959, 1430, 1835, 2009, 2103
ApaLI GTGCAC 1 cut(s) 2286
ApeKI GCWGC 7 cut(s) 19, 884, 2040, 2294, 2407, 2564, 2567
ApoI RAATTY 6 cut(s) 817, 1403, 1530, 1629, 2808, 3064
ArsI GACNNNNNNTTYG 2 cut(s) 2443, 2475
AseI ATTAAT 1 cut(s) 3251
Asp700I GAANNNNTTC 1 cut(s) 1459
Asp718I GGTACC 1 cut(s) 1052
AspS9I GGNCC 3 cut(s) 933, 1942, 2188
AsuC2I CCSGG 1 cut(s) 3191
AsuHPI GGTGA 8 cut(s) 197, 755, 1004, 1271, 2447, 2872, 2888, 3002
AvaI CYCGRG 3 cut(s) 263, 795, 2315
AvaII GGWCC 2 cut(s) 1942, 2188
BaeGI GKGCMC 2 cut(s) 340, 2290
BalI TGGCCA 2 cut(s) 661, 961
BanI GGYRCC 2 cut(s) 1052, 2231
BanII GRGCYC 5 cut(s) 536, 2020, 2098, 2316, 2517
BarI GAAGNNNNNNTAC 2 cut(s) 2744, 2776
BbsI GAAGAC 2 cut(s) 744, 1813
Bbv12I GWGCWC 8 cut(s) 258, 536, 1645, 2020, 2290, 2316, 2506, 3078
BbvI GCAGC 7 cut(s) 31, 896, 2027, 2281, 2419, 2551, 2554
BceAI ACGGC 2 cut(s) 44, 335
BciT130I CCWGG 5 cut(s) 905, 918, 1160, 1335, 2013
BciVI GTATCC 3 cut(s) 692, 2112, 2764
BclI TGATCA 1 cut(s) 3015
BcnI CCSGG 1 cut(s) 3191
BcoDI GTCTC 6 cut(s) 202, 836, 1146, 1555, 2323, 3093
BfaI CTAG 7 cut(s) 333, 434, 911, 1379, 1803, 2688, 2789
BfmI CTRYAG 4 cut(s) 1364, 1916, 2473, 2895
BfoI RGCGCY 4 cut(s) 126, 480, 2092, 2235
BfrI CTTAAG 1 cut(s) 1006
BfuI GTATCC 3 cut(s) 692, 2112, 2764
BglI GCCNNNNNGGC 1 cut(s) 2993
BglII AGATCT 1 cut(s) 1686
Bme1390I CCNGG 6 cut(s) 905, 918, 1160, 1335, 2013, 3191
Bme18I GGWCC 2 cut(s) 1942, 2188
BmeT110I CYCGRG 3 cut(s) 263, 795, 2315
BmgBI CACGTC 1 cut(s) 94
BmgT120I GGNCC 3 cut(s) 933, 1942, 2188
BmiI GGNNCC 4 cut(s) 133, 1054, 2157, 2233
BmrFI CCNGG 6 cut(s) 905, 918, 1160, 1335, 2013, 3191
BmsI GCATC 9 cut(s) 658, 730, 1260, 1943, 2344, 2579, 2710, 2974, 3176
BpiI GAAGAC 2 cut(s) 744, 1813
BpmI CTGGAG 1 cut(s) 2034
BpuEI CTTGAG 3 cut(s) 818, 2714, 3031
BpuMI CCSGG 1 cut(s) 3191
Bsa29I ATCGAT 1 cut(s) 3150
BsaHI GRCGYC 4 cut(s) 33, 45, 195, 2232
BsaJI CCNNGG 7 cut(s) 264, 345, 485, 917, 1316, 1333, 3190
BsaWI WCCGGW 2 cut(s) 1519, 2958
BsaXI ACNNNNNCTCC 8 cut(s) 83, 113, 182, 212, 401, 431, 1017, 1047
Bsc4I CCNNNNNNNGG 7 cut(s) 1599, 1979, 2057, 2165, 2428, 2660, 3196
Bse118I RCCGGY 1 cut(s) 2007
Bse1I ACTGG 6 cut(s) 662, 949, 1037, 1838, 1856, 2878
Bse3DI GCAATG 1 cut(s) 2073
BseAI TCCGGA 2 cut(s) 1519, 2958
BseBI CCWGG 5 cut(s) 905, 918, 1160, 1335, 2013
BseCI ATCGAT 1 cut(s) 3150
BseDI CCNNGG 7 cut(s) 264, 345, 485, 917, 1316, 1333, 3190
BseLI CCNNNNNNNGG 7 cut(s) 1599, 1979, 2057, 2165, 2428, 2660, 3196
BseMI GCAATG 1 cut(s) 2073
BseMII CTCAG 7 cut(s) 464, 513, 1195, 1695, 1734, 2502, 2739
BseNI ACTGG 6 cut(s) 662, 949, 1037, 1838, 1856, 2878
BseRI GAGGAG 5 cut(s) 124, 222, 225, 228, 1907
BseSI GKGCMC 2 cut(s) 340, 2290
BseX3I CGGCCG 1 cut(s) 299
BseXI GCAGC 7 cut(s) 31, 896, 2027, 2281, 2419, 2551, 2554
BseYI CCCAGC 2 cut(s) 2091, 2942
BsgI GTGCAG 1 cut(s) 1153
Bsh1236I CGCG 7 cut(s) 65, 286, 291, 304, 487, 504, 2292
Bsh1285I CGRYCG 2 cut(s) 302, 688
BshFI GGCC 9 cut(s) 301, 350, 661, 935, 961, 1432, 1837, 2011, 2105
BshNI GGYRCC 2 cut(s) 1052, 2231
BshVI ATCGAT 1 cut(s) 3150
BsiEI CGRYCG 2 cut(s) 302, 688
BsiHKAI GWGCWC 8 cut(s) 258, 536, 1645, 2020, 2290, 2316, 2506, 3078
BsiHKCI CYCGRG 3 cut(s) 263, 795, 2315
BsiSI CCGG 5 cut(s) 251, 1520, 2008, 2959, 3190
BslFI GGGAC 4 cut(s) 20, 1409, 2959, 3235
BslI CCNNNNNNNGG 7 cut(s) 1599, 1979, 2057, 2165, 2428, 2660, 3196
BsmAI GTCTC 6 cut(s) 202, 836, 1146, 1555, 2323, 3093
BsmBI CGTCTC 1 cut(s) 202
BsmFI GGGAC 4 cut(s) 20, 1409, 2959, 3235
BsmI GAATGC 2 cut(s) 1212, 2373
BsnI GGCC 9 cut(s) 301, 350, 661, 935, 961, 1432, 1837, 2011, 2105
BsoBI CYCGRG 3 cut(s) 263, 795, 2315
Bsp13I TCCGGA 2 cut(s) 1519, 2958
Bsp143I GATC 9 cut(s) 202, 619, 1028, 1360, 1474, 1516, 1580, 1686, 3015
BspANI GGCC 9 cut(s) 301, 350, 661, 935, 961, 1432, 1837, 2011, 2105
BspCNI CTCAG 7 cut(s) 465, 514, 1194, 1696, 1733, 2503, 2740
BspDI ATCGAT 1 cut(s) 3150
BspEI TCCGGA 2 cut(s) 1519, 2958
BspFNI CGCG 7 cut(s) 65, 286, 291, 304, 487, 504, 2292
BspHI TCATGA 1 cut(s) 1308
BspLI GGNNCC 4 cut(s) 133, 1054, 2157, 2233
BspMAI CTGCAG 2 cut(s) 1368, 1920
BspPI GGATC 6 cut(s) 614, 1036, 1368, 1469, 1511, 1588
BspQI GCTCTTC 1 cut(s) 3207
BspT107I GGYRCC 2 cut(s) 1052, 2231
BspTI CTTAAG 1 cut(s) 1006
BsrBI CCGCTC 1 cut(s) 2849
BsrDI GCAATG 1 cut(s) 2073
BsrFI RCCGGY 1 cut(s) 2007
BsrI ACTGG 6 cut(s) 662, 949, 1037, 1838, 1856, 2878
BssAI RCCGGY 1 cut(s) 2007
BssECI CCNNGG 7 cut(s) 264, 345, 485, 917, 1316, 1333, 3190
BssMI GATC 9 cut(s) 202, 619, 1028, 1360, 1474, 1516, 1580, 1686, 3015
BssNI GRCGYC 4 cut(s) 33, 45, 195, 2232
BssT1I CCWWGG 2 cut(s) 345, 1316
Bst2UI CCWGG 5 cut(s) 905, 918, 1160, 1335, 2013
Bst4CI ACNGT 7 cut(s) 713, 743, 848, 998, 2192, 2423, 2455
Bst6I CTCTTC 4 cut(s) 395, 2319, 2530, 3207
BstACI GRCGYC 4 cut(s) 33, 45, 195, 2232
BstAFI CTTAAG 1 cut(s) 1006
BstAPI GCANNNNNTGC 4 cut(s) 1878, 2004, 2294, 2564
BstDEI CTNAG 8 cut(s) 473, 522, 1181, 1704, 1720, 2511, 2608, 2748
BstDSI CCRYGG 1 cut(s) 485
BstEII GGTNACC 2 cut(s) 992, 2435
BstENI CCTNNNNNAGG 1 cut(s) 2055
BstFNI CGCG 7 cut(s) 65, 286, 291, 304, 487, 504, 2292
BstH2I RGCGCY 4 cut(s) 126, 480, 2092, 2235
BstKTI GATC 9 cut(s) 205, 622, 1031, 1363, 1477, 1519, 1583, 1689, 3018
BstMAI GTCTC 6 cut(s) 202, 836, 1146, 1555, 2323, 3093
BstMBI GATC 9 cut(s) 202, 619, 1028, 1360, 1474, 1516, 1580, 1686, 3015
BstMCI CGRYCG 2 cut(s) 302, 688
BstNI CCWGG 5 cut(s) 905, 918, 1160, 1335, 2013
BstNSI RCATGY 1 cut(s) 3168
BstPI GGTNACC 2 cut(s) 992, 2435
BstSCI CCNGG 6 cut(s) 903, 916, 1158, 1333, 2011, 3189
BstSFI CTRYAG 4 cut(s) 1364, 1916, 2473, 2895
BstSLI GKGCMC 2 cut(s) 340, 2290
BstUI CGCG 7 cut(s) 65, 286, 291, 304, 487, 504, 2292
BstV1I GCAGC 7 cut(s) 31, 896, 2027, 2281, 2419, 2551, 2554
BstV2I GAAGAC 2 cut(s) 744, 1813
BstX2I RGATCY 4 cut(s) 1360, 1474, 1516, 1686
BstYI RGATCY 4 cut(s) 1360, 1474, 1516, 1686
BstZI CGGCCG 1 cut(s) 299
Bsu15I ATCGAT 1 cut(s) 3150
BsuI GTATCC 3 cut(s) 692, 2112, 2764
BsuRI GGCC 9 cut(s) 301, 350, 661, 935, 961, 1432, 1837, 2011, 2105
BsuTUI ATCGAT 1 cut(s) 3150
BtgI CCRYGG 1 cut(s) 485
BtgZI GCGATG 1 cut(s) 604
BtrI CACGTC 1 cut(s) 94
BtsI GCAGTG 4 cut(s) 1879, 1925, 2648, 3250
BtsIMutI CAGTG 9 cut(s) 470, 853, 1189, 1275, 1879, 1925, 2648, 2871, 3250
CaiI CAGNNNCTG 1 cut(s) 1727
CciI TCATGA 1 cut(s) 1308
CciNI GCGGCCGC 1 cut(s) 299
Cfr10I RCCGGY 1 cut(s) 2007
Cfr13I GGNCC 3 cut(s) 933, 1942, 2188
Cfr42I CCGCGG 1 cut(s) 488
ClaI ATCGAT 1 cut(s) 3150
CseI GACGC 3 cut(s) 106, 329, 2447
Csp6I GTAC 6 cut(s) 1053, 1488, 1820, 2508, 2620, 2761
CviQI GTAC 6 cut(s) 1053, 1488, 1820, 2508, 2620, 2761
DdeI CTNAG 8 cut(s) 473, 522, 1181, 1704, 1720, 2511, 2608, 2748
DinI GGCGCC 1 cut(s) 2233
DpnI GATC 9 cut(s) 204, 621, 1030, 1362, 1476, 1518, 1582, 1688, 3017
DpnII GATC 9 cut(s) 202, 619, 1028, 1360, 1474, 1516, 1580, 1686, 3015
DraIII CACNNNGTG 1 cut(s) 2285
DrdI GACNNNNNNGTC 1 cut(s) 326
DseDI GACNNNNNNGTC 1 cut(s) 326
EaeI YGGCCR 3 cut(s) 299, 659, 959
EagI CGGCCG 1 cut(s) 299
Eam1104I CTCTTC 4 cut(s) 395, 2319, 2530, 3207
EarI CTCTTC 4 cut(s) 395, 2319, 2530, 3207
EciI GGCGGA 3 cut(s) 91, 231, 471
Ecl136II GAGCTC 3 cut(s) 534, 2018, 2314
EclXI CGGCCG 1 cut(s) 299
Eco130I CCWWGG 2 cut(s) 345, 1316
Eco24I GRGCYC 5 cut(s) 536, 2020, 2098, 2316, 2517
Eco32I GATATC 2 cut(s) 925, 2143
Eco47I GGWCC 2 cut(s) 1942, 2188
Eco47III AGCGCT 1 cut(s) 478
Eco52I CGGCCG 1 cut(s) 299
Eco53kI GAGCTC 3 cut(s) 534, 2018, 2314
Eco57I CTGAAG 6 cut(s) 592, 1449, 1455, 1689, 1749, 2574
Eco88I CYCGRG 3 cut(s) 263, 795, 2315
Eco91I GGTNACC 2 cut(s) 992, 2435
EcoICRI GAGCTC 3 cut(s) 534, 2018, 2314
EcoNI CCTNNNNNAGG 1 cut(s) 2055
EcoO65I GGTNACC 2 cut(s) 992, 2435
EcoRI GAATTC 2 cut(s) 2808, 3064
EcoRII CCWGG 5 cut(s) 903, 916, 1158, 1333, 2011
EcoRV GATATC 2 cut(s) 925, 2143
EcoT14I CCWWGG 2 cut(s) 345, 1316
EcoT22I ATGCAT 1 cut(s) 2375
EcoT38I GRGCYC 5 cut(s) 536, 2020, 2098, 2316, 2517
EgeI GGCGCC 1 cut(s) 2233
EheI GGCGCC 1 cut(s) 2233
ErhI CCWWGG 2 cut(s) 345, 1316
Esp3I CGTCTC 1 cut(s) 202
FalI AAGNNNNNCTT 4 cut(s) 1000, 1032, 1095, 1127
FaqI GGGAC 4 cut(s) 20, 1409, 2959, 3235
FauI CCCGC 1 cut(s) 2842
FauNDI CATATG 3 cut(s) 929, 2114, 3127
FbaI TGATCA 1 cut(s) 3015
FblI GTMKAC 3 cut(s) 48, 96, 1782
FriOI GRGCYC 5 cut(s) 536, 2020, 2098, 2316, 2517
FspAI RTGCGCAY 1 cut(s) 1274
FspBI CTAG 7 cut(s) 333, 434, 911, 1379, 1803, 2688, 2789
FspI TGCGCA 1 cut(s) 1274
GsaI CCCAGC 2 cut(s) 2095, 2946
GsuI CTGGAG 1 cut(s) 2034
HaeII RGCGCY 4 cut(s) 126, 480, 2092, 2235
HaeIII GGCC 9 cut(s) 301, 350, 661, 935, 961, 1432, 1837, 2011, 2105
HapII CCGG 5 cut(s) 251, 1520, 2008, 2959, 3190
HgaI GACGC 3 cut(s) 106, 329, 2447
Hin1I GRCGYC 4 cut(s) 33, 45, 195, 2232
HincII GTYRAC 3 cut(s) 49, 1849, 3202
HindII GTYRAC 3 cut(s) 49, 1849, 3202
HindIII AAGCTT 4 cut(s) 938, 1193, 2706, 3227
HpaI GTTAAC 1 cut(s) 3202
HpaII CCGG 5 cut(s) 251, 1520, 2008, 2959, 3190
HphI GGTGA 8 cut(s) 197, 755, 1004, 1271, 2447, 2872, 2888, 3002
Hpy166II GTNNAC 9 cut(s) 49, 97, 655, 1187, 1783, 1849, 2288, 2879, 3202
Hpy8I GTNNAC 9 cut(s) 49, 97, 655, 1187, 1783, 1849, 2288, 2879, 3202
Hpy99I CGWCG 9 cut(s) 32, 35, 47, 50, 65, 194, 197, 323, 2463
HpyAV CCTTC 7 cut(s) 148, 400, 588, 995, 1377, 1430, 2357
HpyCH4III ACNGT 7 cut(s) 713, 743, 848, 998, 2192, 2423, 2455
HpyCH4IV ACGT 5 cut(s) 33, 45, 93, 141, 195
HpyF3I CTNAG 8 cut(s) 473, 522, 1181, 1704, 1720, 2511, 2608, 2748
HpySE526I ACGT 5 cut(s) 33, 45, 93, 141, 195
Hsp92I GRCGYC 4 cut(s) 33, 45, 195, 2232
KasI GGCGCC 1 cut(s) 2231
Kpn2I TCCGGA 2 cut(s) 1519, 2958
KpnI GGTACC 1 cut(s) 1056
KroI GCCGGC 1 cut(s) 2007
KroNI GCCGGC 1 cut(s) 2009
Ksp22I TGATCA 1 cut(s) 3015
KspAI GTTAAC 1 cut(s) 3202
KspI CCGCGG 1 cut(s) 488
Kzo9I GATC 9 cut(s) 202, 619, 1028, 1360, 1474, 1516, 1580, 1686, 3015
LguI GCTCTTC 1 cut(s) 3207
LmnI GCTCC 7 cut(s) 137, 253, 484, 539, 2015, 2023, 2728
Lsp1109I GCAGC 7 cut(s) 31, 896, 2027, 2281, 2419, 2551, 2554
LweI GCATC 9 cut(s) 658, 730, 1260, 1943, 2344, 2579, 2710, 2974, 3176
MaeI CTAG 7 cut(s) 333, 434, 911, 1379, 1803, 2688, 2789
MaeII ACGT 5 cut(s) 33, 45, 93, 141, 195
MaeIII GTNAC 6 cut(s) 743, 992, 1468, 1829, 1922, 2435
MalI GATC 9 cut(s) 204, 621, 1030, 1362, 1476, 1518, 1582, 1688, 3017
MbiI CCGCTC 1 cut(s) 2849
MboI GATC 9 cut(s) 202, 619, 1028, 1360, 1474, 1516, 1580, 1686, 3015
MfeI CAATTG 2 cut(s) 966, 2633
MflI RGATCY 4 cut(s) 1360, 1474, 1516, 1686
MlsI TGGCCA 2 cut(s) 661, 961
MluNI TGGCCA 2 cut(s) 661, 961
Mly113I GGCGCC 1 cut(s) 2232
MlyI GAGTC 3 cut(s) 1391, 2985, 3060
MmeI TCCRAC 4 cut(s) 162, 213, 732, 2174
Mox20I TGGCCA 2 cut(s) 661, 961
Mph1103I ATGCAT 1 cut(s) 2375
MroI TCCGGA 2 cut(s) 1519, 2958
MroNI GCCGGC 1 cut(s) 2007
MroXI GAANNNNTTC 1 cut(s) 1459
MscI TGGCCA 2 cut(s) 661, 961
MseI TTAA 8 cut(s) 1007, 1152, 1230, 1757, 2576, 3105, 3201, 3251
MslI CAYNNNNRTG 5 cut(s) 1815, 1887, 2497, 3027, 3059
Msp20I TGGCCA 2 cut(s) 661, 961
MspA1I CMGCKG 3 cut(s) 129, 487, 612
MspCI CTTAAG 1 cut(s) 1006
MspI CCGG 5 cut(s) 251, 1520, 2008, 2959, 3190
MspR9I CCNGG 6 cut(s) 905, 918, 1160, 1335, 2013, 3191
MunI CAATTG 2 cut(s) 966, 2633
Mva1269I GAATGC 2 cut(s) 1212, 2373
MvaI CCWGG 5 cut(s) 905, 918, 1160, 1335, 2013
MvnI CGCG 7 cut(s) 65, 286, 291, 304, 487, 504, 2292
NaeI GCCGGC 1 cut(s) 2009
NarI GGCGCC 1 cut(s) 2232
NciI CCSGG 1 cut(s) 3191
NdeI CATATG 3 cut(s) 929, 2114, 3127
NdeII GATC 9 cut(s) 202, 619, 1028, 1360, 1474, 1516, 1580, 1686, 3015
NgoMIV GCCGGC 1 cut(s) 2007
NlaIV GGNNCC 4 cut(s) 133, 1054, 2157, 2233
NmeAIII GCCGAG 1 cut(s) 589
NmuCI GTSAC 4 cut(s) 743, 992, 1922, 2435
NotI GCGGCCGC 1 cut(s) 299
NsbI TGCGCA 1 cut(s) 1274
NsiI ATGCAT 1 cut(s) 2375
NspI RCATGY 1 cut(s) 3168
PaeR7I CTCGAG 1 cut(s) 2315
PagI TCATGA 1 cut(s) 1308
PciSI GCTCTTC 1 cut(s) 3207
PcsI WCGNNNNNNNCGW 5 cut(s) 39, 189, 198, 426, 2455
PctI GAATGC 2 cut(s) 1212, 2373
PdiI GCCGGC 1 cut(s) 2009
PdmI GAANNNNTTC 1 cut(s) 1459
PflFI GACNNNGTC 3 cut(s) 32, 92, 194
PleI GAGTC 3 cut(s) 1391, 2984, 3059
PluTI GGCGCC 1 cut(s) 2235
PpsI GAGTC 3 cut(s) 1391, 2984, 3059
PshBI ATTAAT 1 cut(s) 3251
PsiI TTATAA 1 cut(s) 864
Psp124BI GAGCTC 3 cut(s) 536, 2020, 2316
Psp6I CCWGG 5 cut(s) 903, 916, 1158, 1333, 2011
PspEI GGTNACC 2 cut(s) 992, 2435
PspFI CCCAGC 2 cut(s) 2091, 2942
PspGI CCWGG 5 cut(s) 903, 916, 1158, 1333, 2011
PspN4I GGNNCC 4 cut(s) 133, 1054, 2157, 2233
PspPI GGNCC 3 cut(s) 933, 1942, 2188
PspXI VCTCGAGB 1 cut(s) 2315
PsrI GAACNNNNNNTAC 4 cut(s) 2230, 2262, 2588, 2620
PstI CTGCAG 2 cut(s) 1368, 1920
PstNI CAGNNNCTG 1 cut(s) 1727
PsuI RGATCY 4 cut(s) 1360, 1474, 1516, 1686
PsyI GACNNNGTC 3 cut(s) 32, 92, 194
RsaI GTAC 6 cut(s) 1054, 1489, 1821, 2509, 2621, 2762
RsaNI GTAC 6 cut(s) 1053, 1488, 1820, 2508, 2620, 2761
RseI CAYNNNNRTG 5 cut(s) 1815, 1887, 2497, 3027, 3059
SacI GAGCTC 3 cut(s) 536, 2020, 2316
SacII CCGCGG 1 cut(s) 488
SalI GTCGAC 1 cut(s) 47
SapI GCTCTTC 1 cut(s) 3207
SaqAI TTAA 8 cut(s) 1007, 1152, 1230, 1757, 2576, 3105, 3201, 3251
Sau3AI GATC 9 cut(s) 202, 619, 1028, 1360, 1474, 1516, 1580, 1686, 3015
Sau96I GGNCC 3 cut(s) 933, 1942, 2188
SchI GAGTC 3 cut(s) 1391, 2985, 3060
ScrFI CCNGG 6 cut(s) 905, 918, 1160, 1335, 2013, 3191
SfaNI GCATC 9 cut(s) 658, 730, 1260, 1943, 2344, 2579, 2710, 2974, 3176
SfcI CTRYAG 4 cut(s) 1364, 1916, 2473, 2895
SfoI GGCGCC 1 cut(s) 2233
Sfr274I CTCGAG 1 cut(s) 2315
Sfr303I CCGCGG 1 cut(s) 488
SgrBI CCGCGG 1 cut(s) 488
SinI GGWCC 2 cut(s) 1942, 2188
SlaI CTCGAG 1 cut(s) 2315
SmiMI CAYNNNNRTG 5 cut(s) 1815, 1887, 2497, 3027, 3059
SmlI CTYRAG 5 cut(s) 833, 1006, 2315, 2693, 3046
SmoI CTYRAG 5 cut(s) 833, 1006, 2315, 2693, 3046
SspDI GGCGCC 1 cut(s) 2231
SspMI CTAG 7 cut(s) 333, 434, 911, 1379, 1803, 2688, 2789
SstI GAGCTC 3 cut(s) 536, 2020, 2316
StyD4I CCNGG 6 cut(s) 903, 916, 1158, 1333, 2011, 3189
StyI CCWWGG 2 cut(s) 345, 1316
TaaI ACNGT 7 cut(s) 713, 743, 848, 998, 2192, 2423, 2455
TaiI ACGT 5 cut(s) 36, 48, 96, 144, 198
TatI WGTACW 1 cut(s) 2760
Tru1I TTAA 8 cut(s) 1007, 1152, 1230, 1757, 2576, 3105, 3201, 3251
Tru9I TTAA 8 cut(s) 1007, 1152, 1230, 1757, 2576, 3105, 3201, 3251
TscAI CASTG 9 cut(s) 477, 853, 1189, 1282, 1879, 1925, 2655, 2878, 3250
TseFI GTSAC 4 cut(s) 743, 992, 1922, 2435
TseI GCWGC 7 cut(s) 19, 884, 2040, 2294, 2407, 2564, 2567
Tsp45I GTSAC 4 cut(s) 743, 992, 1922, 2435
TspGWI ACGGA 1 cut(s) 571
TspRI CASTG 9 cut(s) 477, 853, 1189, 1282, 1879, 1925, 2655, 2878, 3250
Tth111I GACNNNGTC 3 cut(s) 32, 92, 194
Vha464I CTTAAG 1 cut(s) 1006
VneI GTGCAC 1 cut(s) 2286
VpaK11BI GGWCC 2 cut(s) 1942, 2188
VspI ATTAAT 1 cut(s) 3251
XagI CCTNNNNNAGG 1 cut(s) 2055
XapI RAATTY 6 cut(s) 817, 1403, 1530, 1629, 2808, 3064
XbaI TCTAGA 1 cut(s) 1802
XceI RCATGY 1 cut(s) 3168
XcmI CCANNNNNNNNNTGG 1 cut(s) 1596
XhoI CTCGAG 1 cut(s) 2315
XmiI GTMKAC 3 cut(s) 48, 96, 1782
XmnI GAANNNNTTC 1 cut(s) 1459
XspI CTAG 7 cut(s) 333, 434, 911, 1379, 1803, 2688, 2789
ZraI GACGTC 3 cut(s) 34, 46, 196
Zsp2I ATGCAT 1 cut(s) 2375
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.