MD13G1279000.v1.1

Histone-lysine n-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0002114
Physical Location & Seq
Forward (+)
39189832 .. 39205478
15647 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1279000.v1.1.491

Sequence Viewer

Length: 2406 bp
ATGTGGCCAGCAATTGTGGTGGATGAATCCCTTATTGGTGATCGTAAAGGCTTAAGCAAAATTTTGGAAGGAATATCAGTTCCAGTGCAGTTTTTTGGTACCCATGACTTTGCAAGGATTAAAGTGAAACAAGCAATCTCATTTCTCAAAGGACTTCTTTCTTCTTTCCATTTGAAGTGCAAGAAGCCTGGATTCATGAAAAGCTTGGAAGAAGCAAAAATGTATCTCAATGAACAAAAGCTTCCAAGAAGAATGCTACGGCTGCAAAATGGAATTAACATTGATGAATGTGAAAGTATAAGTGGAGAGGATGAAGTGAGTGCAGATTCTGATGAAGGATGTTTTGATGATGCAGGGATTCCGAGAACACTGGATTACCTTGGAACTTCTCCATTTGTGATCGGAGATTTGCAGATAATAAACCTAGACCTTGAAACGGTCTTGCTGGTCCCAAATAGAGTTGATAAGAGAATTTGGAGGCTTGAGTCATCAGGGATTTTTCGTGCAAGTCCGTTTCCAGGAAAGATTGTCAGGGACTCAGAATGTTTTCAGGATGAGAAATACATTTGGCCTGAAGGTTATACTGCCTTGAGGAAATTTACTTCAATTACAGATCCAAGTGTACTTGCCTTATATAAGATGGAGGTGTTGAGAGATACCGAATCAAATATTCGACCTCTGTTCAAAGTGACAATTGATACAGGAGAGCAGTTCAAAGGATCTACACCATCAGCTTGCTGGAATAAAATATACAAAAGGATAAGGAAAGCACGAAACACTTCATTTGATGGTTCTAATGGCAATGCTGACGGCAGATTAGAAGGGACCTATAAATCTGGTTCTCATATGTTTGGTTTCTCTATACCGGAAGTTGCTAAACTTATTCAGAGGTTATCAAAATCCAGGCTTTCTTCAAAATTACCCAAGTGCAAGTTAGCCTCTAGGAGATATCGAGATGTTCCTGTTGGTTACAGACCTGTTCGTGTGGACTGGAAGGACCTTGATAAATGCAGTGTTTGCCACATGGATGAGTATGAAAACAACCTGTTCCTGCAGTGTGACAAATGCAGAATGATGGTCCATGCAAGATGCTATGGGGAATTGGAACCTGTTGGTGGGGTACTATGGTTATGCAACTTATGTCGGCCTGGGGCTCCTAAACCTCTACCACCTTGCTGCCTTTGTCCTGTAATAGGGGGTGCAATGAAGCCTACAACTGACGGGCGCTGGGCTCATCTAGCTTGTGCCATATGGATACCAGAAACCTGCCTATCTGATGTTAAGAGAATGGAGCCAATTGATGGGCTTAGTAGAATCAATAAGGACCGTTGGAAGCTATTATGTAGTATCTGTGGCGTTTCGTATGGAGCCTGCATTCAATGTTCAAACCATACCTGTTGTGTGGCATATCACCCACTTTGCGCGCGAGCTGCTGGTCTTTGTGTTGAGCTTGAGGATGAGGACAGACTACATCTACTATCTGTAGACGATGATGAAGTAGAGCAGTGCATTCGTCTTCTTTCCTTCTGCAAGAAGCATAGGCAGGCAACAAATGACCGTTCAGCTGCTGATAACTGTATTGGTCGAACTGGGCGCCAGTGCTCAGAATACACTCCACCAACAAATCCATCTGGATGTGCTCGTACGGAACCATACAACTACTTTTGTAGAAGAGGGAGAAAAGAGCCTGAAGCCATAGCTGCTGCATCCTTAAAGCGTTTGTTTGTCGAGAACCAGCCTTACTTAGTAGGTGGTTACAGCCAACACCAATTGTCAAGTAATTCACAGCTTCCGAATGGCTCTAAGTTCTGTTCTAGCCTTCAGAGGCTGAAAGCCTCCCGGCTTGATGCTCCTAATGACATACTTTCTATGGCTGAGAAGTATAAATACATGAGGGACACCTTTCGAAAAAGACTAGCATTTGGAAAATCGGGAATTCATGGTTTTGGTATCTTTGCAAAGCACCCACATAGAGCAGGGGACATGGTGATTGAATACACGGGCGAACTTGTTAGACCTCCTGTAGCTGACAGGAGGGAGCACTTCATATATAATTCATTGGTGGGGGCTGGGACTTATATGTTCCGGATTGATGATGAACGAGTCATTGATGCCACAAGAGCTGGAAGCATTGCTCACCTAATTAATCACTCTTGTGAACCAAATTGCTACTCAAGAGTCATTAGTGTTAATAATGATGAGCATATAATTATATTTGCAAAGAGAGACATTAAACGATGGGAAGAACTTACATATGACTATAGATTCTTTTCAATAGATGAACAACTGGCATGTTGTTGTGGTTTCCCAAGATGTCGGGGGGTGGTTAATGATGTTGAATCCAAAGAGCGAGCAAGCAAGCTTTGTGCCCCTCGCAGCGAGTTAATAGATTGGAGTGGAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000785 GO:0001067 GO:0003002 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005886 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008289 GO:0008757 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0009909 GO:0009987 GO:0010093 GO:0010314 GO:0010468 GO:0010556 GO:0016020 GO:0016043 GO:0016278 GO:0016279 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018022 GO:0018024 GO:0018193 GO:0018205 GO:0019219 GO:0019222 GO:0019538 GO:0022414 GO:0031323 GO:0031326 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0035091 GO:0036211 GO:0042054 GO:0042800 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043414 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0048367 GO:0048437 GO:0048444 GO:0048449 GO:0048518 GO:0048578 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048586 GO:0048608 GO:0048646 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0051276 GO:0051568 GO:0060255 GO:0061458 GO:0065007 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0097159 GO:0099402 GO:0140096 GO:1901363 GO:1901564 GO:1901981 GO:1903506 GO:1905392 GO:1905393 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000243 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FYRC FYRN PHD_2 PWWP SET zf-HC5HC2H_2

Protein Analysis

802

Amino Acids

90.58

Weight (kDa)

8.51

Isoelectric Point (pI)

40.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PWWP PF00855 1 - 76 2.1e-08 PWWP domain
FYRN PF05964 174 - 218 1e-11 F/Y-rich N-terminus
FYRC PF05965 225 - 302 1.4e-12 F/Y rich C-terminus
PHD_2 PF13831 348 - 381 1.7e-06 PHD-finger
zf-HC5HC2H_2 PF13832 391 - 513 2.5e-31 PHD-zinc-finger like domain
zf-HC5HC2H PF13771 412 - 514 7.5e-19 PHD-like zinc-binding domain
SET PF00856 648 - 754 2.2e-25 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1274
Acc65I GGTACC 1 cut(s) 98
AccB1I GGYRCC 2 cut(s) 98, 1593
AccB7I CCANNNNNTGG 1 cut(s) 1301
AccI GTMKAC 1 cut(s) 1485
AccII CGCG 2 cut(s) 1424, 1426
AccIII TCCGGA 1 cut(s) 2085
AclWI GGATC 2 cut(s) 608, 727
AcoI YGGCCR 1 cut(s) 5
AcsI RAATTY 4 cut(s) 60, 471, 596, 1935
AcuI CTGAAG 3 cut(s) 594, 1710, 1805
AcyI GRCGYC 1 cut(s) 1594
AfaI GTAC 4 cut(s) 100, 624, 1122, 1645
AfiI CCNNNNNNNGG 5 cut(s) 436, 518, 1115, 1193, 1301
AflII CTTAAG 1 cut(s) 52
AjnI CCWGG 4 cut(s) 187, 517, 902, 1147
AjuI GAANNNNNNNTTGG 2 cut(s) 18, 50
AleI CACNNNNGTG 1 cut(s) 2154
AloI GAACNNNNNNTCC 2 cut(s) 63, 95
Alw21I GWGCWC 3 cut(s) 1604, 1642, 2043
Alw26I GTCTC 1 cut(s) 2220
AlwI GGATC 2 cut(s) 608, 727
AlwNI CAGNNNCTG 3 cut(s) 329, 1568, 1828
Aor13HI TCCGGA 1 cut(s) 2085
AoxI GGCC 3 cut(s) 5, 569, 1145
ApeKI GCWGC 7 cut(s) 262, 1176, 1430, 1565, 1700, 1703, 2376
ApoI RAATTY 4 cut(s) 60, 471, 596, 1935
AseI ATTAAT 1 cut(s) 2145
Asp700I GAANNNNTTC 2 cut(s) 546, 778
Asp718I GGTACC 1 cut(s) 98
AspLEI GCGC 4 cut(s) 1227, 1424, 1426, 1596
AspS9I GGNCC 5 cut(s) 448, 825, 997, 1078, 1324
AsuC2I CCSGG 1 cut(s) 1840
AsuHPI GGTGA 4 cut(s) 50, 1403, 1999, 2129
AsuII TTCGAA 1 cut(s) 1906
AvaII GGWCC 5 cut(s) 448, 825, 997, 1078, 1324
BaeGI GKGCMC 1 cut(s) 2371
BaeI ACNNNNGTAYC 2 cut(s) 1112, 1145
BalI TGGCCA 1 cut(s) 7
BanI GGYRCC 2 cut(s) 98, 1593
BanII GRGCYC 2 cut(s) 1156, 1234
BarI GAAGNNNNNNTAC 2 cut(s) 1871, 1903
BbsI GAAGAC 1 cut(s) 1508
Bbv12I GWGCWC 3 cut(s) 1604, 1642, 2043
BbvI GCAGC 7 cut(s) 249, 1163, 1417, 1552, 1687, 1690, 2388
BccI CCATC 7 cut(s) 634, 736, 782, 1069, 1295, 1636, 2232
BceAI ACGGC 2 cut(s) 275, 826
BcgI CGANNNNNNTGC 2 cut(s) 1493, 1527
BciT130I CCWGG 4 cut(s) 189, 519, 904, 1149
BciVI GTATCC 1 cut(s) 1248
BcnI CCSGG 1 cut(s) 1840
BcoDI GTCTC 1 cut(s) 2220
BfaI CTAG 5 cut(s) 425, 942, 1238, 1815, 1916
BfmI CTRYAG 4 cut(s) 1052, 1482, 2022, 2260
BfoI RGCGCY 2 cut(s) 1228, 1597
BfrI CTTAAG 1 cut(s) 52
BfuAI ACCTGC 1 cut(s) 1274
BfuI GTATCC 1 cut(s) 1248
BisI GCNGC 7 cut(s) 263, 1177, 1431, 1566, 1701, 1704, 2377
BlsI GCNGC 7 cut(s) 264, 1178, 1432, 1567, 1702, 1705, 2378
Bme1390I CCNGG 5 cut(s) 189, 519, 904, 1149, 1840
Bme18I GGWCC 5 cut(s) 448, 825, 997, 1078, 1324
BmgT120I GGNCC 5 cut(s) 448, 825, 997, 1078, 1324
BmiI GGNNCC 9 cut(s) 100, 450, 826, 1107, 1155, 1293, 1369, 1595, 1650
BmrFI CCNGG 5 cut(s) 189, 519, 904, 1149, 1840
BmrI ACTGGG 1 cut(s) 1599
BmsI GCATC 5 cut(s) 340, 1079, 1715, 1837, 2101
BmuI ACTGGG 1 cut(s) 1599
BpiI GAAGAC 1 cut(s) 1508
Bpu14I TTCGAA 1 cut(s) 1906
BpuEI CTTGAG 4 cut(s) 503, 610, 1472, 2158
BpuMI CCSGG 1 cut(s) 1840
BsaHI GRCGYC 1 cut(s) 1594
BsaJI CCNNGG 2 cut(s) 379, 1148
BsaWI WCCGGW 2 cut(s) 865, 2085
Bsc4I CCNNNNNNNGG 5 cut(s) 436, 518, 1115, 1193, 1301
Bse1I ACTGG 6 cut(s) 83, 375, 995, 1594, 1597, 2292
Bse3DI GCAATG 3 cut(s) 808, 1209, 2130
BseAI TCCGGA 1 cut(s) 2085
BseBI CCWGG 4 cut(s) 189, 519, 904, 1149
BseDI CCNNGG 2 cut(s) 379, 1148
BseGI GGATG 8 cut(s) 28, 316, 344, 559, 1033, 1462, 1640, 1706
BseLI CCNNNNNNNGG 5 cut(s) 436, 518, 1115, 1193, 1301
BseMI GCAATG 3 cut(s) 808, 1209, 2130
BseMII CTCAG 3 cut(s) 552, 1617, 1866
BseNI ACTGG 6 cut(s) 83, 375, 995, 1594, 1597, 2292
BsePI GCGCGC 1 cut(s) 1422
BseSI GKGCMC 1 cut(s) 2371
BseXI GCAGC 7 cut(s) 249, 1163, 1417, 1552, 1687, 1690, 2388
BseYI CCCAGC 2 cut(s) 1227, 2069
BsgI GTGCAG 2 cut(s) 107, 342
Bsh1236I CGCG 2 cut(s) 1424, 1426
BshFI GGCC 3 cut(s) 7, 571, 1147
BshNI GGYRCC 2 cut(s) 98, 1593
BsiHKAI GWGCWC 3 cut(s) 1604, 1642, 2043
BsiSI CCGG 3 cut(s) 866, 1840, 2086
BsiWI CGTACG 1 cut(s) 1643
BslFI GGGAC 6 cut(s) 434, 548, 838, 1910, 1994, 2086
BslI CCNNNNNNNGG 5 cut(s) 436, 518, 1115, 1193, 1301
BsmAI GTCTC 1 cut(s) 2220
BsmFI GGGAC 6 cut(s) 434, 548, 838, 1910, 1994, 2086
BsmI GAATGC 3 cut(s) 258, 1374, 1509
BsnI GGCC 3 cut(s) 7, 571, 1147
Bsp119I TTCGAA 1 cut(s) 1906
Bsp1286I GDGCHC 6 cut(s) 1156, 1234, 1604, 1642, 2043, 2371
Bsp13I TCCGGA 1 cut(s) 2085
Bsp143I GATC 4 cut(s) 40, 399, 613, 719
BspANI GGCC 3 cut(s) 7, 571, 1147
BspCNI CTCAG 3 cut(s) 551, 1616, 1867
BspEI TCCGGA 1 cut(s) 2085
BspFNI CGCG 2 cut(s) 1424, 1426
BspHI TCATGA 1 cut(s) 195
BspLI GGNNCC 9 cut(s) 100, 450, 826, 1107, 1155, 1293, 1369, 1595, 1650
BspMAI CTGCAG 1 cut(s) 1056
BspMI ACCTGC 1 cut(s) 1274
BspPI GGATC 2 cut(s) 608, 727
BspT104I TTCGAA 1 cut(s) 1906
BspT107I GGYRCC 2 cut(s) 98, 1593
BspTI CTTAAG 1 cut(s) 52
BsrDI GCAATG 3 cut(s) 808, 1209, 2130
BsrI ACTGG 6 cut(s) 83, 375, 995, 1594, 1597, 2292
BssECI CCNNGG 2 cut(s) 379, 1148
BssHII GCGCGC 1 cut(s) 1422
BssMI GATC 4 cut(s) 40, 399, 613, 719
BssNI GRCGYC 1 cut(s) 1594
BssT1I CCWWGG 1 cut(s) 379
Bst2UI CCWGG 4 cut(s) 189, 519, 904, 1149
Bst4CI ACNGT 4 cut(s) 439, 1328, 1559, 1577
Bst6I CTCTTC 1 cut(s) 1666
BstACI GRCGYC 1 cut(s) 1594
BstAFI CTTAAG 1 cut(s) 52
BstAPI GCANNNNNTGC 1 cut(s) 1017
BstBI TTCGAA 1 cut(s) 1906
BstC8I GCNNGC 9 cut(s) 9, 736, 1372, 1424, 1428, 1545, 2352, 2356, 2360
BstDEI CTNAG 6 cut(s) 538, 1307, 1603, 1744, 1803, 1875
BstENI CCTNNNNNAGG 1 cut(s) 1191
BstF5I GGATG 8 cut(s) 28, 316, 344, 559, 1033, 1462, 1640, 1706
BstFNI CGCG 2 cut(s) 1424, 1426
BstH2I RGCGCY 2 cut(s) 1228, 1597
BstHHI GCGC 4 cut(s) 1227, 1424, 1426, 1596
BstKTI GATC 4 cut(s) 43, 402, 616, 722
BstMAI GTCTC 1 cut(s) 2220
BstMBI GATC 4 cut(s) 40, 399, 613, 719
BstMWI GCNNNNNNNGC 6 cut(s) 262, 1017, 1238, 1430, 1700, 2120
BstNI CCWGG 4 cut(s) 189, 519, 904, 1149
BstNSI RCATGY 1 cut(s) 2295
BstSCI CCNGG 5 cut(s) 187, 517, 902, 1147, 1838
BstSFI CTRYAG 4 cut(s) 1052, 1482, 2022, 2260
BstSLI GKGCMC 1 cut(s) 2371
BstUI CGCG 2 cut(s) 1424, 1426
BstV1I GCAGC 7 cut(s) 249, 1163, 1417, 1552, 1687, 1690, 2388
BstV2I GAAGAC 1 cut(s) 1508
BstX2I RGATCY 2 cut(s) 613, 719
BstYI RGATCY 2 cut(s) 613, 719
BsuI GTATCC 1 cut(s) 1248
BsuRI GGCC 3 cut(s) 7, 571, 1147
BtsCI GGATG 8 cut(s) 28, 316, 344, 559, 1033, 1462, 1640, 1706
BtsI GCAGTG 3 cut(s) 1018, 1061, 1511
BtsIMutI CAGTG 6 cut(s) 90, 368, 1018, 1061, 1511, 1604
BveI ACCTGC 1 cut(s) 1274
Cac8I GCNNGC 9 cut(s) 9, 736, 1372, 1424, 1428, 1545, 2352, 2356, 2360
CaiI CAGNNNCTG 3 cut(s) 329, 1568, 1828
CciI TCATGA 1 cut(s) 195
CfoI GCGC 4 cut(s) 1227, 1424, 1426, 1596
Cfr13I GGNCC 5 cut(s) 448, 825, 997, 1078, 1324
Csp6I GTAC 4 cut(s) 99, 623, 1121, 1644
CspCI CAANNNNNGTGG 1 cut(s) 35
CviAII CATG 8 cut(s) 104, 196, 1024, 1082, 1891, 1940, 1984, 2292
CviQI GTAC 4 cut(s) 99, 623, 1121, 1644
DdeI CTNAG 6 cut(s) 538, 1307, 1603, 1744, 1803, 1875
DinI GGCGCC 1 cut(s) 1595
DpnI GATC 4 cut(s) 42, 401, 615, 721
DpnII GATC 4 cut(s) 40, 399, 613, 719
EaeI YGGCCR 1 cut(s) 5
Eam1104I CTCTTC 1 cut(s) 1666
EarI CTCTTC 1 cut(s) 1666
Eco130I CCWWGG 1 cut(s) 379
Eco24I GRGCYC 2 cut(s) 1156, 1234
Eco32I GATATC 1 cut(s) 950
Eco47I GGWCC 5 cut(s) 448, 825, 997, 1078, 1324
Eco57I CTGAAG 3 cut(s) 594, 1710, 1805
EcoNI CCTNNNNNAGG 1 cut(s) 1191
EcoO109I RGGNCCY 2 cut(s) 825, 997
EcoRI GAATTC 1 cut(s) 1935
EcoRII CCWGG 4 cut(s) 187, 517, 902, 1147
EcoRV GATATC 1 cut(s) 950
EcoT14I CCWWGG 1 cut(s) 379
EcoT38I GRGCYC 2 cut(s) 1156, 1234
EgeI GGCGCC 1 cut(s) 1595
EheI GGCGCC 1 cut(s) 1595
ErhI CCWWGG 1 cut(s) 379
FaeI CATG 8 cut(s) 107, 199, 1027, 1085, 1894, 1943, 1987, 2295
FalI AAGNNNNNCTT 2 cut(s) 141, 173
FaqI GGGAC 6 cut(s) 434, 548, 838, 1910, 1994, 2086
FatI CATG 8 cut(s) 103, 195, 1023, 1081, 1890, 1939, 1983, 2291
FauNDI CATATG 3 cut(s) 846, 1250, 2254
FblI GTMKAC 1 cut(s) 1485
Fnu4HI GCNGC 7 cut(s) 263, 1177, 1431, 1566, 1701, 1704, 2377
FokI GGATG 8 cut(s) 35, 323, 351, 566, 1040, 1469, 1647, 1693
FriOI GRGCYC 2 cut(s) 1156, 1234
Fsp4HI GCNGC 7 cut(s) 263, 1177, 1431, 1566, 1701, 1704, 2377
FspBI CTAG 5 cut(s) 425, 942, 1238, 1815, 1916
GlaI GCGC 4 cut(s) 1226, 1423, 1425, 1595
GluI GCNGC 7 cut(s) 263, 1177, 1431, 1566, 1701, 1704, 2377
GsaI CCCAGC 2 cut(s) 1231, 2073
HaeII RGCGCY 2 cut(s) 1228, 1597
HaeIII GGCC 3 cut(s) 7, 571, 1147
HapII CCGG 3 cut(s) 866, 1840, 2086
HhaI GCGC 4 cut(s) 1227, 1424, 1426, 1596
Hin1I GRCGYC 1 cut(s) 1594
Hin1II CATG 8 cut(s) 107, 199, 1027, 1085, 1894, 1943, 1987, 2295
Hin6I GCGC 4 cut(s) 1225, 1422, 1424, 1594
HinP1I GCGC 4 cut(s) 1225, 1422, 1424, 1594
HindIII AAGCTT 3 cut(s) 202, 239, 2360
HpaII CCGG 3 cut(s) 866, 1840, 2086
HphI GGTGA 4 cut(s) 50, 1403, 1999, 2129
Hpy166II GTNNAC 4 cut(s) 623, 988, 1486, 2159
Hpy188I TCNGA 9 cut(s) 331, 363, 404, 541, 888, 1276, 1606, 1794, 1824
Hpy188III TCNNGA 8 cut(s) 196, 551, 953, 1632, 1729, 1932, 2086, 2175
Hpy8I GTNNAC 4 cut(s) 623, 988, 1486, 2159
HpyAV CCTTC 7 cut(s) 62, 329, 569, 815, 988, 1534, 1829
HpyCH4III ACNGT 4 cut(s) 439, 1328, 1559, 1577
HpyF10VI GCNNNNNNNGC 6 cut(s) 262, 1017, 1238, 1430, 1700, 2120
HpyF3I CTNAG 6 cut(s) 538, 1307, 1603, 1744, 1803, 1875
Hsp92I GRCGYC 1 cut(s) 1594
Hsp92II CATG 8 cut(s) 107, 199, 1027, 1085, 1894, 1943, 1987, 2295
HspAI GCGC 4 cut(s) 1225, 1422, 1424, 1594
KasI GGCGCC 1 cut(s) 1593
Kpn2I TCCGGA 1 cut(s) 2085
KpnI GGTACC 1 cut(s) 102
Kzo9I GATC 4 cut(s) 40, 399, 613, 719
LmnI GCTCC 5 cut(s) 1159, 1291, 1367, 1855, 2038
Lsp1109I GCAGC 7 cut(s) 249, 1163, 1417, 1552, 1687, 1690, 2388
LweI GCATC 5 cut(s) 340, 1079, 1715, 1837, 2101
MaeI CTAG 5 cut(s) 425, 942, 1238, 1815, 1916
MaeIII GTNAC 4 cut(s) 688, 968, 1058, 1754
MalI GATC 4 cut(s) 42, 401, 615, 721
MboI GATC 4 cut(s) 40, 399, 613, 719
MboII GAAGA 7 cut(s) 153, 221, 261, 903, 1508, 1683, 2255
MfeI CAATTG 4 cut(s) 12, 693, 1296, 1769
MflI RGATCY 2 cut(s) 613, 719
MhlI GDGCHC 6 cut(s) 1156, 1234, 1604, 1642, 2043, 2371
MlsI TGGCCA 1 cut(s) 7
MluNI TGGCCA 1 cut(s) 7
Mly113I GGCGCC 1 cut(s) 1594
MlyI GAGTC 4 cut(s) 494, 530, 2112, 2187
MmeI TCCRAC 1 cut(s) 1310
Mox20I TGGCCA 1 cut(s) 7
MroI TCCGGA 1 cut(s) 2085
MroXI GAANNNNTTC 2 cut(s) 546, 778
MscI TGGCCA 1 cut(s) 7
MslI CAYNNNNRTG 3 cut(s) 1026, 1633, 2154
Msp20I TGGCCA 1 cut(s) 7
MspA1I CMGCKG 1 cut(s) 1565
MspCI CTTAAG 1 cut(s) 52
MspI CCGG 3 cut(s) 866, 1840, 2086
MspR9I CCNGG 5 cut(s) 189, 519, 904, 1149, 1840
MunI CAATTG 4 cut(s) 12, 693, 1296, 1769
Mva1269I GAATGC 3 cut(s) 258, 1374, 1509
MvaI CCWGG 4 cut(s) 189, 519, 904, 1149
MvnI CGCG 2 cut(s) 1424, 1426
MwoI GCNNNNNNNGC 6 cut(s) 262, 1017, 1238, 1430, 1700, 2120
NarI GGCGCC 1 cut(s) 1594
NciI CCSGG 1 cut(s) 1840
NdeI CATATG 3 cut(s) 846, 1250, 2254
NdeII GATC 4 cut(s) 40, 399, 613, 719
NlaIII CATG 8 cut(s) 107, 199, 1027, 1085, 1894, 1943, 1987, 2295
NlaIV GGNNCC 9 cut(s) 100, 450, 826, 1107, 1155, 1293, 1369, 1595, 1650
NmuCI GTSAC 2 cut(s) 688, 1058
NspI RCATGY 1 cut(s) 2295
NspV TTCGAA 1 cut(s) 1906
OliI CACNNNNGTG 1 cut(s) 2154
PagI TCATGA 1 cut(s) 195
PauI GCGCGC 1 cut(s) 1422
PctI GAATGC 3 cut(s) 258, 1374, 1509
PdmI GAANNNNTTC 2 cut(s) 546, 778
PfeI GAWTC 8 cut(s) 26, 192, 326, 358, 662, 1314, 2265, 2339
Pfl23II CGTACG 1 cut(s) 1643
PflMI CCANNNNNTGG 1 cut(s) 1301
PfoI TCCNGGA 1 cut(s) 517
PkrI GCNGC 7 cut(s) 264, 1178, 1432, 1567, 1702, 1705, 2378
PleI GAGTC 4 cut(s) 493, 530, 2111, 2186
PluTI GGCGCC 1 cut(s) 1597
PpsI GAGTC 4 cut(s) 493, 530, 2111, 2186
PpuMI RGGWCCY 2 cut(s) 825, 997
PshBI ATTAAT 1 cut(s) 2145
Psp5II RGGWCCY 2 cut(s) 825, 997
Psp6I CCWGG 4 cut(s) 187, 517, 902, 1147
PspFI CCCAGC 2 cut(s) 1227, 2069
PspGI CCWGG 4 cut(s) 187, 517, 902, 1147
PspLI CGTACG 1 cut(s) 1643
PspN4I GGNNCC 9 cut(s) 100, 450, 826, 1107, 1155, 1293, 1369, 1595, 1650
PspPI GGNCC 5 cut(s) 448, 825, 997, 1078, 1324
PspPPI RGGWCCY 2 cut(s) 825, 997
PsrI GAACNNNNNNTAC 2 cut(s) 1724, 1756
PstI CTGCAG 1 cut(s) 1056
PstNI CAGNNNCTG 3 cut(s) 329, 1568, 1828
PsuI RGATCY 2 cut(s) 613, 719
PteI GCGCGC 1 cut(s) 1422
PvuII CAGCTG 1 cut(s) 1565
RsaI GTAC 4 cut(s) 100, 624, 1122, 1645
RsaNI GTAC 4 cut(s) 99, 623, 1121, 1644
RseI CAYNNNNRTG 3 cut(s) 1026, 1633, 2154
SatI GCNGC 7 cut(s) 263, 1177, 1431, 1566, 1701, 1704, 2377
Sau3AI GATC 4 cut(s) 40, 399, 613, 719
Sau96I GGNCC 5 cut(s) 448, 825, 997, 1078, 1324
SchI GAGTC 4 cut(s) 494, 530, 2112, 2187
ScrFI CCNGG 5 cut(s) 189, 519, 904, 1149, 1840
SduI GDGCHC 6 cut(s) 1156, 1234, 1604, 1642, 2043, 2371
SfaNI GCATC 5 cut(s) 340, 1079, 1715, 1837, 2101
SfcI CTRYAG 4 cut(s) 1052, 1482, 2022, 2260
SfoI GGCGCC 1 cut(s) 1595
SfuI TTCGAA 1 cut(s) 1906
SinI GGWCC 5 cut(s) 448, 825, 997, 1078, 1324
SmiMI CAYNNNNRTG 3 cut(s) 1026, 1633, 2154
SmlI CTYRAG 5 cut(s) 52, 482, 589, 1451, 2173
SmoI CTYRAG 5 cut(s) 52, 482, 589, 1451, 2173
SspDI GGCGCC 1 cut(s) 1593
SspI AATATT 1 cut(s) 670
SspMI CTAG 5 cut(s) 425, 942, 1238, 1815, 1916
StyD4I CCNGG 5 cut(s) 187, 517, 902, 1147, 1838
StyI CCWWGG 1 cut(s) 379
TaaI ACNGT 4 cut(s) 439, 1328, 1559, 1577
TaqI TCGA 5 cut(s) 673, 952, 1585, 1728, 1906
TatI WGTACW 1 cut(s) 622
TfiI GAWTC 8 cut(s) 26, 192, 326, 358, 662, 1314, 2265, 2339
TscAI CASTG 6 cut(s) 90, 375, 1018, 1061, 1511, 1604
TseFI GTSAC 2 cut(s) 688, 1058
TseI GCWGC 7 cut(s) 262, 1176, 1430, 1565, 1700, 1703, 2376
Tsp45I GTSAC 2 cut(s) 688, 1058
TspGWI ACGGA 2 cut(s) 501, 1661
TspRI CASTG 6 cut(s) 90, 375, 1018, 1061, 1511, 1604
Van91I CCANNNNNTGG 1 cut(s) 1301
Vha464I CTTAAG 1 cut(s) 52
VpaK11BI GGWCC 5 cut(s) 448, 825, 997, 1078, 1324
VspI ATTAAT 1 cut(s) 2145
XagI CCTNNNNNAGG 1 cut(s) 1191
XapI RAATTY 4 cut(s) 60, 471, 596, 1935
XceI RCATGY 1 cut(s) 2295
XcmI CCANNNNNNNNNTGG 1 cut(s) 735
XmiI GTMKAC 1 cut(s) 1485
XmnI GAANNNNTTC 2 cut(s) 546, 778
XspI CTAG 5 cut(s) 425, 942, 1238, 1815, 1916
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.