Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004176

Physical Location & Seq

Genomic Coordinates Forward (+)

1790216 .. 1796715

Gene Structure 6500 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G05910.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3633 bp

ATGCATCCCAAGCGATCAAGTCAAGGAGATGGTTCAGTTACTAAGCCAGTTAGAACCAGTGATAGGCTTAGGAGGAGGCCCAAATTGCATGGTCGCTCATACTTGTACTACTCTTCACCAAACATGTTACATAATCGGAAAAGAAACACAAAGACAAGAACGGCAGCCTCTCAGATCGCAAAGATGCTGCACAAAGGAAACCGTCCAGCGAGGGCATCAAATGCCGCGCCAATTGCATCTGATCTCCGGCGTTCCACGAGGAAGAGAAGAATTTCTGTAAACCTGGAGGACTATACAGACAGTTCTGGAGCGGAGGATGAGGATATGATGAGTCCAGCATATCGAACTTTGAGGAGGAGAGTTCATAAAAACTTCTCAACTTCAAAAAGTAGAAAGGACATGGATGCTGAATTGGCACCACGTCGTGAGGGTCTCCGTCCTCGTCGTTCAACAACAATTGCTAATAAACGACTGAAAACAGAATCTGGCGCTGACCAAGATACATCAGAAGAGAAAGATGGCCAAGATGAAACTGAGAATGGGAATGAATTAGATGATGCGGATGATGGTGAAAATGAGGTTGAGGCTGAAGACGAGGGTAATGGAGAAGATGAAGGCGATGGCGAAGATGAGGGAGAAGAAGATGGTGATGATGATGAAGAGGGTGATGAAGAACAAGAGGGAAGGAAGAGATATGATCTGCGAAACCGTGCTGAAGTCCGGAGAATGCCTACGGGAGAAATCAACAAGCAACAACAACCTAGATCTCCTCGGAGAGTATTGCATCAGGGCATGGGCACCAGGGTTGGAAGAGATGGTAGGAGAGGTGGGTCTCGGCCTCACAAGCGCCATCGCTTTACAAGAACAGATGATTCAGATGATTCTCTTCTTGTGGACGAGTTGGACCAGGGCCCTGCAATTCCCTGGGCTCGAGGTGGAAACAGATCTGGAGCACCTTGGCTATTTGGGGGTTTGGACACGTATGGGTCAAGTTCATTGGGGTTGAACGTTGGAGCTTCTGGTTGGGGTCACCAGAGTGATGGTTTGGCTGCATTAACTTCTGGTGTTCAGACTGCTGGCCCAAGCTCTAAAGGAGGTGCAGATATCCAGCCACTGCAGATTAATGAGGATATAAATTTTGATGACATTGGTGGGCTGTCCGAATACATTAATGATTTGAAGGAAATGGTTTTCTTTCCGTTGCTGTATCCAGAGTTCTTTGCAAGTTACAGCATTACTCCTCCCAGAGGTGTACTGCTGTGTGGTCCTCCAGGCACTGGTAAAACACTGATTGCTCGAGCATTAGCATGTGCTGCTTCAAAAGCTGGACAGAAAGTTAGCTTTTATATGCGGAAGGGTGCTGATGTTCTTAGTAAGTGGGTTGGCGAGGCTGAGAGACAGCTAAAGCTACTCTTTGAGGAGGCTCAGCGAAACCAGCCTTCCATAATCTTTTTTGATGAAATTGATGGTCTTGCTCCTGTAAGATCTAGCAAGCAGGAACAAATACATAATTCTATTGTTTCAACTTTACTGGCGCTGATGGATGGCCTCGATTCTCGTGGTCAAGTTGTTCTCATTGGAGCAACAAACAGGGTAGATGCAATAGACGGAGCTTTACGCCGCCCTGGCAGATTCGATCGGGAGTTTAATTTTTCCTTACCAGGTTGCGAAGCACGAGCCGAAATATTGGATATTCACACTCGTAAATGGAAGCACCCACCTACTAGGGAGCTGAAAGAGGAACTGGCAGCTACTTGTGTAGGGTATTGTGGTGCTGATCTAAAAGCTTTGTGCACTGAAGCTGCGATTCGTGCTTTTCGTGAGAAATATCCACAAGTTTATACCAGTGATGATAAATACGCCATAGATGTTGGGTTGGTTAATGTTGAAAAGAGCCACTTTGTAGAGGCAATGTCAGCTATTACTCCTGCTGCCCATAGAGGGTCTGTTGTGCAATCCAGACCACTCTCTCCGGTTGTGTTGCCATGTTTACATCGACACCTCCTTGAATCCATGAGTTTAATATCAGATATTTTTCCCTCGTCAGCCACGTCATCGGAGTTGACGAAGCTGTCAATACTTACATTTGGATCTGCAATTCCTCTTGTTTATCGACCTCGACTTTTGCTGCTTGGTGGTGAAGGAGTTGGACTGGATCATCTTGGGCCTGCAATTTTACATGAGCTAGAAAAGTTCCCTATTCATTCTCTGGGACTTCCATCTCTCCTTTCGGATCCTGGTGCAAAGACCCCAGAAGAAGCGTTAGTACATATATTTAGTGAAGCTAGAAGAACAACACCTTCAATACTTTACATACCAATGTTCAATAATTGGTGGGAAAATGCTCATGAACAGCTTAGGGCTGTATTTCTGACTTTGTTAGAAGAATTGCCATCAAATCTACCCATATTATTACTTGCTACATCTTATGGTGAATTGTCTGACATGGAAGAGCAGTCAGTATTTGACAATCGATCTGTCTATACTGTGGACAAACCATCAAGTGAAGACAGGTCTTTGTTCTTTGACCGTTTGATTGAAGCTGCTCTCTCAGTCATTTCTGGCTTAAATGGCAAACCTGATGGACCACAACCCCTTCCAGAACTTCCCAAGGTTCCAAAAGAACCTACTGGTCCAAAACCCGCAGAAGTAAAAGCCAAGGTGGAAGCAGAGCAGCATGCCCTTCGGCGATTGCGTATGTGTCTCAGAGATGTTTGCAATAGAATACTATATGATAAAAGATTCAGCGCATTCCACTTTCCAGTTACTGACGAGGATGCTCCAAACTATCGCTCAATAATTCAAATTCCAATGGATACGGCTACTCTGCTGCAGCGTGTTGATACTGGGCAGTATCTGACATGTACACCGTTTTTGCAAGATGTGGATCTCATTGTGAGAAATGCCAAGGCTTACAATGGAGATGATTACGCTGGAGCGAGAATTGTCAGTAGAGCCTATGAGCTTCGAGATGTAGTGCATGGGATGCTGTCACAGATGGACCCAGCACTGCTAACATATTGTGATAAGATCGCAGCTGAAGGTGGTCCTTCACTGATACCAGATGATCTGAGTGGATCAATCCTCGGTTTAGCTCCTGTTGTGCAGATGGGAACTGTTACTAGAACCAGTGCCAGACTTCGAAATGTGCAGCCAGAGGTTAATTTAGATCGAGATTATGAAGGTCTTAAAAAGCCCAAGAAAACTACTGATGCTGTCAGTATAGATTCAGCTGCAGACAAATCACAGAACCAAGATTCAGGCCAAGAAATGCCATCTCCGGATGCGGCCAACCCACAGTCAGCAGCTCCTTCTCCAACAGATGGTGATAGAGAAGACCAAAGCGAGCCACCAAGTAAAGAGGCATCTGCAGAAGATATGAGTGGTGATTCTTGCAAGGGTCCTGCGGCCAAGTCGGATAAAGAAATTTCAAGCCGAACAGAATCTGTAAAGGGAGTATTCATGGAACGTACTGACAACTACAGCATTCCGCAGATGGAGAGGCTTTACACTCGAATCATGAAGGGTGTTCTTGAGACTCTGGACAAAGGGCTTCGTGATGATGATAATAATCCTAAGCATTCAATTTTGAGATTTTTGTCGGAATTCGCACAGCATCAGGCGAATTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003682 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006304 GO:0006355 GO:0006357 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010639 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031935 GO:0031936 GO:0033043 GO:0033044 GO:0034641 GO:0035510 GO:0040029 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044728 GO:0045815 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051128 GO:0051129 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0060968 GO:0060969 GO:0065007 GO:0070988 GO:0071704 GO:0080090 GO:0080111 GO:0090304 GO:1901360 GO:1902275 GO:1902680 GO:1903506 GO:1903508 GO:1905268 GO:2000112 GO:2001141 GO:2001251

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA Bromodomain

Protein Analysis

1210

Amino Acids

133.78

Weight (kDa)

5.59

Isoelectric Point (pI)

54.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IstB_IS21	PF01695	417 - 500	4.2e-07	IstB-like ATP binding protein
AAA	PF00004	418 - 552	3e-38	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	580 - 617	7.5e-11	AAA+ lid domain
Bromodomain	PF00439	906 - 976	4.7e-11	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0004176)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05910
fragaria_vesca	FvH4_4g10720 FvH4_4g10720 FvH4_4g10720 FvH4_4g10720 FvH4_4g10720 FvH4_4g10720
malus_domestica	MD04G1007800.v1.1
prunus_persica	Prupe.1G191800_v2.0.a1 Prupe.1G191800_v2.0.a1 Prupe.1G191800_v2.0.a1 Prupe.1G191800_v2.0.a1
pyrus_communis	pycom04g03460
rosa_chinensis	RchiOBHm_Chr3g0496841 RchiOBHm_Chr4g0406861
rosa_laevigata	RLG00000008748 RLG00000022493
rosa_multiflora	Rmu_sc0000600.1_g000031 Rmu_sc0001438.1_g000025
rosa_roxburghii	Rroxscaffold_5G00351650 Rroxscaffold_6G00388620
rosa_rugosa	Rorug03G0288300 Rorug04G0075300
rosa_samantha	Rh3AG332000 Rh3BG368600 Rh3CG364900 Rh3DG368000 Rh4AG141500 Rh4BG138300 Rh4CG148200 Rh4DG135400
rosa_wichuraiana	Rw3G029090 Rw4G011520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2071
AccB1I	GGYRCC	2 cut(s)	415, 797
AccB7I	CCANNNNNTGG	2 cut(s)	1277, 3323
AccBSI	CCGCTC	1 cut(s)	311
AccII	CGCG	1 cut(s)	227
AccIII	TCCGGA	2 cut(s)	720, 3280
AciI	CCGC	9 cut(s)	225, 311, 560, 1351, 1621, 2643, 3287, 3407, 3491
AclI	AACGTT	1 cut(s)	1008
AclWI	GGATC	6 cut(s)	2098, 2163, 2228, 2241, 2895, 3085
AcoI	YGGCCR	3 cut(s)	520, 3288, 3408
AcsI	RAATTY	6 cut(s)	270, 1135, 2805, 3426, 3605, 3625
AcuI	CTGAAG	4 cut(s)	609, 735, 1818, 3060
AdeI	CACNNNGTG	1 cut(s)	425
AfaI	GTAC	5 cut(s)	107, 1254, 2268, 2866, 3472
AfiI	CCNNNNNNNGG	5 cut(s)	63, 1247, 1277, 1941, 3323
AflIII	ACRYGT	3 cut(s)	123, 978, 2861
AjiI	CACGTC	2 cut(s)	422, 2052
AjnI	CCWGG	8 cut(s)	282, 800, 906, 923, 1270, 1624, 1660, 2236
AleI	CACNNNNGTG	1 cut(s)	1035
Alw21I	GWGCWC	2 cut(s)	955, 1796
Alw26I	GTCTC	5 cut(s)	437, 837, 1390, 2708, 3530
Alw44I	GTGCAC	1 cut(s)	1792
AlwI	GGATC	6 cut(s)	2098, 2163, 2228, 2241, 2895, 3085
AlwNI	CAGNNNCTG	6 cut(s)	485, 1114, 1277, 2768, 2857, 3446
Ama87I	CYCGRG	2 cut(s)	930, 1296
Aor13HI	TCCGGA	2 cut(s)	720, 3280
ApaI	GGGCCC	1 cut(s)	914
ApaLI	GTGCAC	1 cut(s)	1792
ApoI	RAATTY	6 cut(s)	270, 1135, 2805, 3426, 3605, 3625
AseI	ATTAAT	2 cut(s)	1122, 1170
Asp700I	GAANNNNTTC	1 cut(s)	271
AspLEI	GCGC	5 cut(s)	229, 491, 849, 1537, 2750
AsuHPI	GGTGA	9 cut(s)	108, 581, 659, 677, 1022, 2150, 2444, 3338, 3398
AsuII	TTCGAA	1 cut(s)	3142
AvaI	CYCGRG	2 cut(s)	930, 1296
AvaII	GGWCC	7 cut(s)	904, 1265, 2585, 2633, 3001, 3047, 3401
BaeGI	GKGCMC	3 cut(s)	800, 914, 1796
BalI	TGGCCA	1 cut(s)	522
BamHI	GGATCC	1 cut(s)	2233
BanI	GGYRCC	2 cut(s)	415, 797
BanII	GRGCYC	2 cut(s)	914, 931
BarI	GAAGNNNNNNTAC	2 cut(s)	2250, 2282
BauI	CACGAG	3 cut(s)	256, 1557, 1674
BbsI	GAAGAC	3 cut(s)	597, 2514, 3342
Bbv12I	GWGCWC	2 cut(s)	955, 1796
BceAI	ACGGC	2 cut(s)	177, 2835
BcgI	CGANNNNNNTGC	2 cut(s)	2666, 2700
BciT130I	CCWGG	8 cut(s)	284, 802, 908, 925, 1272, 1626, 1662, 2238
BciVI	GTATCC	2 cut(s)	1218, 2809
BcoDI	GTCTC	5 cut(s)	437, 837, 1390, 2708, 3530
BfaI	CTAG	6 cut(s)	762, 1488, 1725, 2186, 2286, 3123
BfmI	CTRYAG	5 cut(s)	1115, 2831, 3234, 3369, 3481
BfoI	RGCGCY	3 cut(s)	492, 850, 1538
BfuI	GTATCC	2 cut(s)	1218, 2809
BglI	GCCNNNNNGGC	1 cut(s)	1626
BglII	AGATCT	3 cut(s)	764, 944, 1484
BlpI	GCTNAGC	1 cut(s)	1425
Bme1390I	CCNGG	8 cut(s)	284, 802, 908, 925, 1272, 1626, 1662, 2238
Bme18I	GGWCC	7 cut(s)	904, 1265, 2585, 2633, 3001, 3047, 3401
BmeT110I	CYCGRG	2 cut(s)	930, 1296
BmgBI	CACGTC	2 cut(s)	422, 2052
BmiI	GGNNCC	7 cut(s)	417, 799, 912, 2235, 2616, 3003, 3402
BmrFI	CCNGG	8 cut(s)	284, 802, 908, 925, 1272, 1626, 1662, 2238
BmrI	ACTGGG	1 cut(s)	2856
BmuI	ACTGGG	1 cut(s)	2856
BpiI	GAAGAC	3 cut(s)	597, 2514, 3342
BpmI	CTGGAG	5 cut(s)	305, 327, 969, 1254, 2955
Bpu10I	CCTNAGC	3 cut(s)	68, 2357, 3576
Bpu1102I	GCTNAGC	1 cut(s)	1425
Bpu14I	TTCGAA	1 cut(s)	3142
BpuEI	CTTGAG	1 cut(s)	3554
Bsa29I	ATCGAT	1 cut(s)	2473
BsaAI	YACGTR	1 cut(s)	981
BsaBI	GATNNNNATC	2 cut(s)	2886, 3570
BsaI	GGTCTC	2 cut(s)	437, 837
BsaWI	WCCGGW	3 cut(s)	720, 1972, 3280
Bsc4I	CCNNNNNNNGG	5 cut(s)	63, 1247, 1277, 1941, 3323
Bse3DI	GCAATG	1 cut(s)	1917
Bse8I	GATNNNNATC	2 cut(s)	2886, 3570
BseAI	TCCGGA	2 cut(s)	720, 3280
BseBI	CCWGG	8 cut(s)	284, 802, 908, 925, 1272, 1626, 1662, 2238
BseCI	ATCGAT	1 cut(s)	2473
BseGI	GGATG	8 cut(s)	4, 322, 409, 568, 1549, 2782, 2991, 3289
BseJI	GATNNNNATC	2 cut(s)	2886, 3570
BseLI	CCNNNNNNNGG	5 cut(s)	63, 1247, 1277, 1941, 3323
BseMI	GCAATG	1 cut(s)	1917
BseMII	CTCAG	7 cut(s)	185, 525, 1383, 1439, 2565, 2719, 3062
BseRI	GAGGAG	6 cut(s)	88, 367, 370, 759, 1230, 1433
BseSI	GKGCMC	3 cut(s)	800, 914, 1796
BseYI	CCCAGC	1 cut(s)	3004
BsgI	GTGCAG	4 cut(s)	173, 1119, 3125, 3170
Bsh1236I	CGCG	1 cut(s)	227
Bsh1285I	CGRYCG	1 cut(s)	1639
BshNI	GGYRCC	2 cut(s)	415, 797
BshVI	ATCGAT	1 cut(s)	2473
BsiEI	CGRYCG	1 cut(s)	1639
BsiHKAI	GWGCWC	2 cut(s)	955, 1796
BsiHKCI	CYCGRG	2 cut(s)	930, 1296
BsiSI	CCGG	4 cut(s)	247, 721, 1973, 3281
BslFI	GGGAC	1 cut(s)	2226
BslI	CCNNNNNNNGG	5 cut(s)	63, 1247, 1277, 1941, 3323
BsmAI	GTCTC	5 cut(s)	437, 837, 1390, 2708, 3530
BsmFI	GGGAC	1 cut(s)	2226
BsmI	GAATGC	4 cut(s)	732, 2750, 3486, 3580
Bso31I	GGTCTC	2 cut(s)	437, 837
BsoBI	CYCGRG	2 cut(s)	930, 1296
Bsp119I	TTCGAA	1 cut(s)	3142
Bsp120I	GGGCCC	1 cut(s)	910
Bsp1286I	GDGCHC	5 cut(s)	800, 914, 931, 955, 1796
Bsp13I	TCCGGA	2 cut(s)	720, 3280
Bsp1407I	TGTACA	1 cut(s)	2864
Bsp1720I	GCTNAGC	1 cut(s)	1425
BspACI	CCGC	9 cut(s)	225, 311, 560, 1351, 1621, 2643, 3287, 3407, 3491
BspCNI	CTCAG	7 cut(s)	184, 526, 1384, 1438, 2564, 2718, 3063
BspDI	ATCGAT	1 cut(s)	2473
BspEI	TCCGGA	2 cut(s)	720, 3280
BspFNI	CGCG	1 cut(s)	227
BspHI	TCATGA	2 cut(s)	2347, 3519
BspLI	GGNNCC	7 cut(s)	417, 799, 912, 2235, 2616, 3003, 3402
BspMAI	CTGCAG	4 cut(s)	1119, 2835, 3238, 3373
BspPI	GGATC	6 cut(s)	2098, 2163, 2228, 2241, 2895, 3085
BspQI	GCTCTTC	1 cut(s)	2445
BspT104I	TTCGAA	1 cut(s)	3142
BspT107I	GGYRCC	2 cut(s)	415, 797
BspTNI	GGTCTC	2 cut(s)	437, 837
BsrBI	CCGCTC	1 cut(s)	311
BsrDI	GCAATG	1 cut(s)	1917
BsrGI	TGTACA	1 cut(s)	2864
BssSI	CACGAG	3 cut(s)	256, 1557, 1674
BssT1I	CCWWGG	4 cut(s)	956, 2610, 2658, 2907
Bst2BI	CACGAG	3 cut(s)	256, 1557, 1674
Bst2UI	CCWGG	8 cut(s)	284, 802, 908, 925, 1272, 1626, 1662, 2238
Bst4CI	ACNGT	8 cut(s)	203, 302, 710, 2488, 2531, 2871, 3118, 3300
Bst6I	CTCTTC	8 cut(s)	118, 257, 504, 654, 683, 805, 891, 2445
BstAPI	GCANNNNNTGC	3 cut(s)	221, 1313, 2986
BstAUI	TGTACA	1 cut(s)	2864
BstBAI	YACGTR	1 cut(s)	981
BstBI	TTCGAA	1 cut(s)	3142
BstC8I	GCNNGC	5 cut(s)	1078, 1493, 2169, 2679, 3347
BstEII	GGTNACC	1 cut(s)	1028
BstENI	CCTNNNNNAGG	1 cut(s)	1245
BstF5I	GGATG	8 cut(s)	4, 322, 409, 568, 1549, 2782, 2991, 3289
BstFNI	CGCG	1 cut(s)	227
BstH2I	RGCGCY	3 cut(s)	492, 850, 1538
BstHHI	GCGC	5 cut(s)	229, 491, 849, 1537, 2750
BstMAI	GTCTC	5 cut(s)	437, 837, 1390, 2708, 3530
BstMCI	CGRYCG	1 cut(s)	1639
BstNI	CCWGG	8 cut(s)	284, 802, 908, 925, 1272, 1626, 1662, 2238
BstNSI	RCATGY	4 cut(s)	127, 1311, 2681, 2865
BstPI	GGTNACC	1 cut(s)	1028
BstSCI	CCNGG	8 cut(s)	282, 800, 906, 923, 1270, 1624, 1660, 2236
BstSFI	CTRYAG	5 cut(s)	1115, 2831, 3234, 3369, 3481
BstSLI	GKGCMC	3 cut(s)	800, 914, 1796
BstUI	CGCG	1 cut(s)	227
BstV2I	GAAGAC	3 cut(s)	597, 2514, 3342
BstX2I	RGATCY	6 cut(s)	764, 944, 1484, 2090, 2233, 2887
BstXI	CCANNNNNNTGG	1 cut(s)	1040
BstYI	RGATCY	6 cut(s)	764, 944, 1484, 2090, 2233, 2887
Bsu15I	ATCGAT	1 cut(s)	2473
BsuI	GTATCC	2 cut(s)	1218, 2809
BsuTUI	ATCGAT	1 cut(s)	2473
BtgZI	GCGATG	2 cut(s)	633, 836
BtrI	CACGTC	2 cut(s)	422, 2052
BtsCI	GGATG	8 cut(s)	4, 322, 409, 568, 1549, 2782, 2991, 3289
BtsI	GCAGTG	2 cut(s)	1112, 3008
BtsIMutI	CAGTG	9 cut(s)	64, 1112, 1275, 1286, 1794, 1852, 3008, 3053, 3136
Cac8I	GCNNGC	5 cut(s)	1078, 1493, 2169, 2679, 3347
CaiI	CAGNNNCTG	6 cut(s)	485, 1114, 1277, 2768, 2857, 3446
CciI	TCATGA	2 cut(s)	2347, 3519
CfoI	GCGC	5 cut(s)	229, 491, 849, 1537, 2750
ClaI	ATCGAT	1 cut(s)	2473
CsiI	ACCWGGT	1 cut(s)	1660
Csp6I	GTAC	5 cut(s)	106, 1253, 2267, 2865, 3471
CviQI	GTAC	5 cut(s)	106, 1253, 2267, 2865, 3471
DraIII	CACNNNGTG	1 cut(s)	425
DrdI	GACNNNNNNGTC	1 cut(s)	2071
DseDI	GACNNNNNNGTC	1 cut(s)	2071
EaeI	YGGCCR	3 cut(s)	520, 3288, 3408
Eam1104I	CTCTTC	8 cut(s)	118, 257, 504, 654, 683, 805, 891, 2445
EarI	CTCTTC	8 cut(s)	118, 257, 504, 654, 683, 805, 891, 2445
Eco130I	CCWWGG	4 cut(s)	956, 2610, 2658, 2907
Eco24I	GRGCYC	2 cut(s)	914, 931
Eco31I	GGTCTC	2 cut(s)	437, 837
Eco32I	GATATC	1 cut(s)	1105
Eco47I	GGWCC	7 cut(s)	904, 1265, 2585, 2633, 3001, 3047, 3401
Eco57I	CTGAAG	4 cut(s)	609, 735, 1818, 3060
Eco88I	CYCGRG	2 cut(s)	930, 1296
Eco91I	GGTNACC	1 cut(s)	1028
EcoNI	CCTNNNNNAGG	1 cut(s)	1245
EcoO109I	RGGNCCY	3 cut(s)	910, 911, 3401
EcoO65I	GGTNACC	1 cut(s)	1028
EcoRI	GAATTC	1 cut(s)	3605
EcoRII	CCWGG	8 cut(s)	282, 800, 906, 923, 1270, 1624, 1660, 2236
EcoRV	GATATC	1 cut(s)	1105
EcoT14I	CCWWGG	4 cut(s)	956, 2610, 2658, 2907
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	2 cut(s)	914, 931
ErhI	CCWWGG	4 cut(s)	956, 2610, 2658, 2907
FalI	AAGNNNNNCTT	4 cut(s)	1397, 1429, 1883, 1915
FaqI	GGGAC	1 cut(s)	2226
FauI	CCCGC	1 cut(s)	2650
FokI	GGATG	7 cut(s)	329, 416, 575, 1556, 2789, 2998, 3296
FriOI	GRGCYC	2 cut(s)	914, 931
FspBI	CTAG	6 cut(s)	762, 1488, 1725, 2186, 2286, 3123
GlaI	GCGC	5 cut(s)	228, 490, 848, 1536, 2749
GsaI	CCCAGC	1 cut(s)	3008
GsuI	CTGGAG	5 cut(s)	305, 327, 969, 1254, 2955
HaeII	RGCGCY	3 cut(s)	492, 850, 1538
HapII	CCGG	4 cut(s)	247, 721, 1973, 3281
HhaI	GCGC	5 cut(s)	229, 491, 849, 1537, 2750
Hin6I	GCGC	5 cut(s)	227, 489, 847, 1535, 2748
HinP1I	GCGC	5 cut(s)	227, 489, 847, 1535, 2748
HincII	GTYRAC	1 cut(s)	2064
HindII	GTYRAC	1 cut(s)	2064
HindIII	AAGCTT	1 cut(s)	1785
HpaII	CCGG	4 cut(s)	247, 721, 1973, 3281
HphI	GGTGA	9 cut(s)	108, 581, 659, 677, 1022, 2150, 2444, 3338, 3398
Hpy166II	GTNNAC	8 cut(s)	280, 895, 1253, 1794, 1991, 2064, 2491, 2867
Hpy8I	GTNNAC	8 cut(s)	280, 895, 1253, 1794, 1991, 2064, 2491, 2867
Hpy99I	CGWCG	2 cut(s)	426, 447
HpyCH4III	ACNGT	8 cut(s)	203, 302, 710, 2488, 2531, 2871, 3118, 3300
HpyCH4IV	ACGT	5 cut(s)	421, 980, 1008, 2051, 3469
HpySE526I	ACGT	5 cut(s)	421, 980, 1008, 2051, 3469
HspAI	GCGC	5 cut(s)	227, 489, 847, 1535, 2748
Kpn2I	TCCGGA	2 cut(s)	720, 3280
LguI	GCTCTTC	1 cut(s)	2445
MabI	ACCWGGT	1 cut(s)	1660
MaeI	CTAG	6 cut(s)	762, 1488, 1725, 2186, 2286, 3123
MaeII	ACGT	5 cut(s)	421, 980, 1008, 2051, 3469
MaeIII	GTNAC	7 cut(s)	37, 126, 1028, 1226, 2764, 2991, 3118
MbiI	CCGCTC	1 cut(s)	311
MfeI	CAATTG	2 cut(s)	231, 456
MflI	RGATCY	6 cut(s)	764, 944, 1484, 2090, 2233, 2887
MhlI	GDGCHC	5 cut(s)	800, 914, 931, 955, 1796
MlsI	TGGCCA	1 cut(s)	522
MluNI	TGGCCA	1 cut(s)	522
MlyI	GAGTC	2 cut(s)	340, 3532
MmeI	TCCRAC	7 cut(s)	787, 882, 991, 2128, 3341, 3396, 3582
Mox20I	TGGCCA	1 cut(s)	522
Mph1103I	ATGCAT	1 cut(s)	6
MroI	TCCGGA	2 cut(s)	720, 3280
MroXI	GAANNNNTTC	1 cut(s)	271
MscI	TGGCCA	1 cut(s)	522
MseI	TTAA	9 cut(s)	1055, 1122, 1170, 1647, 1881, 2021, 2567, 3162, 3189
MslI	CAYNNNNRTG	3 cut(s)	1035, 1306, 2318
Msp20I	TGGCCA	1 cut(s)	522
MspA1I	CMGCKG	2 cut(s)	3038, 3233
MspI	CCGG	4 cut(s)	247, 721, 1973, 3281
MspR9I	CCNGG	8 cut(s)	284, 802, 908, 925, 1272, 1626, 1662, 2238
MunI	CAATTG	2 cut(s)	231, 456
Mva1269I	GAATGC	4 cut(s)	732, 2750, 3486, 3580
MvaI	CCWGG	8 cut(s)	284, 802, 908, 925, 1272, 1626, 1662, 2238
MvnI	CGCG	1 cut(s)	227
NlaIV	GGNNCC	7 cut(s)	417, 799, 912, 2235, 2616, 3003, 3402
NmeAIII	GCCGAG	1 cut(s)	814
NmuCI	GTSAC	2 cut(s)	1028, 2991
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	4 cut(s)	127, 1311, 2681, 2865
NspV	TTCGAA	1 cut(s)	3142
OliI	CACNNNNGTG	1 cut(s)	1035
PaeI	GCATGC	1 cut(s)	2681
PaeR7I	CTCGAG	2 cut(s)	930, 1296
PagI	TCATGA	2 cut(s)	2347, 3519
PasI	CCCWGGG	1 cut(s)	924
PciI	ACATGT	2 cut(s)	123, 2861
PciSI	GCTCTTC	1 cut(s)	2445
PcsI	WCGNNNNNNNCGW	4 cut(s)	1816, 2048, 2063, 2692
PctI	GAATGC	4 cut(s)	732, 2750, 3486, 3580
PdmI	GAANNNNTTC	1 cut(s)	271
PflMI	CCANNNNNTGG	2 cut(s)	1277, 3323
Ple19I	CGATCG	1 cut(s)	1639
PleI	GAGTC	2 cut(s)	339, 3532
PpsI	GAGTC	2 cut(s)	339, 3532
Ppu21I	YACGTR	1 cut(s)	981
PpuMI	RGGWCCY	1 cut(s)	3401
PscI	ACATGT	2 cut(s)	123, 2861
PshBI	ATTAAT	2 cut(s)	1122, 1170
Psp1406I	AACGTT	1 cut(s)	1008
Psp5II	RGGWCCY	1 cut(s)	3401
Psp6I	CCWGG	8 cut(s)	282, 800, 906, 923, 1270, 1624, 1660, 2236
PspEI	GGTNACC	1 cut(s)	1028
PspFI	CCCAGC	1 cut(s)	3004
PspGI	CCWGG	8 cut(s)	282, 800, 906, 923, 1270, 1624, 1660, 2236
PspN4I	GGNNCC	7 cut(s)	417, 799, 912, 2235, 2616, 3003, 3402
PspOMI	GGGCCC	1 cut(s)	910
PspPPI	RGGWCCY	1 cut(s)	3401
PspXI	VCTCGAGB	2 cut(s)	930, 1296
PsrI	GAACNNNNNNTAC	2 cut(s)	1199, 1231
PstI	CTGCAG	4 cut(s)	1119, 2835, 3238, 3373
PstNI	CAGNNNCTG	6 cut(s)	485, 1114, 1277, 2768, 2857, 3446
PsuI	RGATCY	6 cut(s)	764, 944, 1484, 2090, 2233, 2887
PvuI	CGATCG	1 cut(s)	1639
PvuII	CAGCTG	2 cut(s)	3038, 3233
RsaI	GTAC	5 cut(s)	107, 1254, 2268, 2866, 3472
RsaNI	GTAC	5 cut(s)	106, 1253, 2267, 2865, 3471
RseI	CAYNNNNRTG	3 cut(s)	1035, 1306, 2318
SapI	GCTCTTC	1 cut(s)	2445
SaqAI	TTAA	9 cut(s)	1055, 1122, 1170, 1647, 1881, 2021, 2567, 3162, 3189
SchI	GAGTC	2 cut(s)	340, 3532
ScrFI	CCNGG	8 cut(s)	284, 802, 908, 925, 1272, 1626, 1662, 2238
SduI	GDGCHC	5 cut(s)	800, 914, 931, 955, 1796
SexAI	ACCWGGT	1 cut(s)	1660
SfcI	CTRYAG	5 cut(s)	1115, 2831, 3234, 3369, 3481
Sfr274I	CTCGAG	2 cut(s)	930, 1296
SfuI	TTCGAA	1 cut(s)	3142
SinI	GGWCC	7 cut(s)	904, 1265, 2585, 2633, 3001, 3047, 3401
SlaI	CTCGAG	2 cut(s)	930, 1296
SmiMI	CAYNNNNRTG	3 cut(s)	1035, 1306, 2318
SmlI	CTYRAG	3 cut(s)	930, 1296, 3533
SmoI	CTYRAG	3 cut(s)	930, 1296, 3533
SphI	GCATGC	1 cut(s)	2681
SsiI	CCGC	9 cut(s)	225, 311, 560, 1351, 1621, 2643, 3287, 3407, 3491
SspI	AATATT	1 cut(s)	1686
SspMI	CTAG	6 cut(s)	762, 1488, 1725, 2186, 2286, 3123
StyD4I	CCNGG	8 cut(s)	282, 800, 906, 923, 1270, 1624, 1660, 2236
StyI	CCWWGG	4 cut(s)	956, 2610, 2658, 2907
TaaI	ACNGT	8 cut(s)	203, 302, 710, 2488, 2531, 2871, 3118, 3300
TaiI	ACGT	5 cut(s)	424, 983, 1011, 2054, 3472
TatI	WGTACW	4 cut(s)	105, 1252, 2266, 2864
TauI	GCSGC	4 cut(s)	227, 1623, 3290, 3410
Tru1I	TTAA	9 cut(s)	1055, 1122, 1170, 1647, 1881, 2021, 2567, 3162, 3189
Tru9I	TTAA	9 cut(s)	1055, 1122, 1170, 1647, 1881, 2021, 2567, 3162, 3189
TscAI	CASTG	9 cut(s)	64, 1119, 1282, 1293, 1801, 1852, 3015, 3060, 3136
TseFI	GTSAC	2 cut(s)	1028, 2991
Tsp45I	GTSAC	2 cut(s)	1028, 2991
TspGWI	ACGGA	3 cut(s)	425, 1188, 1623
TspRI	CASTG	9 cut(s)	64, 1119, 1282, 1293, 1801, 1852, 3015, 3060, 3136
Van91I	CCANNNNNTGG	2 cut(s)	1277, 3323
VneI	GTGCAC	1 cut(s)	1792
VpaK11BI	GGWCC	7 cut(s)	904, 1265, 2585, 2633, 3001, 3047, 3401
VspI	ATTAAT	2 cut(s)	1122, 1170
XagI	CCTNNNNNAGG	1 cut(s)	1245
XapI	RAATTY	6 cut(s)	270, 1135, 2805, 3426, 3605, 3625
XceI	RCATGY	4 cut(s)	127, 1311, 2681, 2865
XhoI	CTCGAG	2 cut(s)	930, 1296
XmnI	GAANNNNTTC	1 cut(s)	271
XspI	CTAG	6 cut(s)	762, 1488, 1725, 2186, 2286, 3123
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.