Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002913

Physical Location & Seq

Genomic Coordinates Reverse (-)

2158413 .. 2160818

Gene Structure 2406 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G07030.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 981 bp

ATGGCTACGGAGGCTACAACCGTACCCAAATTCCAGGAACCTGATCTCCGGCAGGTTTCTCAGACACCGGATTTCAAACCGGAAATCGCTCACGATGGTCTTAAGTTCTGGCAATTTATGATTGCTGGTTCGATTGCTGGCTCCGTCGAACACATGGCGATGTTTCCCGTCGATACCATCAAGACCCATATGCAAGCGCTTCGACCATGTCCCTTAAAACCCGTCGGAATCCGGGAAGCTTTCCGTTCGATTATCCAAAAGGAAGGACCTTCAGCTCTGTATCGCGGGATCTGGGCTATGGGTCTCGGCGCTGGACCTGCTCACGCCGTTTACTTCTCATTCTATGAAGTATCGAAGAAGTATTTATCCGCCGGGGATCAGAACAATTCCGTCGCGCATGCGATGTCCGGCGTATTCGCTACTATATCAAGCGATGCTGTTTTCACTCCCATGGATATGGTGAAGCAGAGGTTGCAGATGGGTGAAGGGACTTATAAAGGAGTCTGGGATTGTGTTAAGAGGGTTTTGCGTGAGGAAGGGATTGGTGCGTTTTATGCTTCTTATAGGACGACGGTTCTGATGAACGCGCCGTTTACGGCTGTTCACTTTGCCACTTACGAGGCTGCTAAGAAGGGATTGATGGAGTTTTCGCCGGATAGAATTAGTGATGAGGAAGGTTGGTTGGTTCACGCTACCGCTGGAGCTGCTGCTGGTGGATTGGCAGCTGCTGTGACTACGCCGCTTGATGTTGTCAAGACGCAGTTGCAATGTCAGGGTGTGTGTGGATGTGACCGCTTCACTAGTAGTTCTATTAGCCATGTACTTAGAACGATAGTGAAAAAAGATGGATACAGAGGACTTCTAAGGGGATGGCTCCCGAGAATGCTCTTCCATGCTCCTGCAGCAGCAATCTGTTGGTCCACTTATGAAGGAGTTAAATCTTTCTTTCAAGACTTCAATGTCGATTCAAACACTGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0005215 GO:0005381 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0006826 GO:0006839 GO:0008150 GO:0008152 GO:0008324 GO:0008380 GO:0009987 GO:0010467 GO:0015075 GO:0015093 GO:0015318 GO:0015684 GO:0016020 GO:0016021 GO:0016070 GO:0019866 GO:0022857 GO:0022890 GO:0030001 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0034220 GO:0034641 GO:0034755 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046873 GO:0046915 GO:0048250 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055085 GO:0065007 GO:0065008 GO:0070838 GO:0071704 GO:0072509 GO:0072511 GO:0090304 GO:0097286 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:1901360 GO:1903874 GO:1990542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

326

Amino Acids

35.7

Weight (kDa)

8.15

Isoelectric Point (pI)

27.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mito_carr	PF00153	34 - 123	1.2e-22	Mitochondrial carrier protein
Mito_carr	PF00153	127 - 215	9e-23	Mitochondrial carrier protein
Mito_carr	PF00153	225 - 318	2.5e-25	Mitochondrial carrier protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002913)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07030 AT2G30160
fragaria_vesca	FvH4_3g39670 FvH4_6g10760
malus_domestica	MD03G1055400.v1.1 MD04G1164600.v1.1 MD11G1056500.v1.1 MD12G1178600.v1.1
prunus_persica	Prupe.6G049200_v2.0.a1 Prupe.6G283800_v2.0.a1
pyrus_communis	pycom03g04410 pycom04g14690 pycom11g04760 pycom12g16860
rosa_chinensis	RchiOBHm_Chr3g0461801 RchiOBHm_Chr5g0071521
rosa_laevigata	RLG00000024897 RLG00000036221
rosa_multiflora	Rmu_co8336553.1_g000001 Rmu_sc0004308.1_g000012 Rmu_sc0005745.1_g000006 Rmu_sc0007777.1_g000002 Rmu_sc0022017.1_g000001 Rmu_sc0022018.1_g000001
rosa_roxburghii	Rroxscaffold_1G00009630 Rroxscaffold_6G00417910
rosa_rugosa	Rorug03G0053800 Rorug05G0412800
rosa_samantha	Rh3AG111800 Rh3BG115100 Rh3CG117300 Rh3DG116800 Rh5AG469000 Rh5BG488100 Rh5CG512200 Rh5DG498900
rosa_wichuraiana	Rw3G009480 Rw5G043570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	495
AasI	GACNNNNNNGTC	1 cut(s)	959
Acc36I	ACCTGC	2 cut(s)	43, 325
AccII	CGCG	3 cut(s)	285, 395, 587
AciI	CCGC	5 cut(s)	285, 369, 696, 740, 793
AclWI	GGATC	2 cut(s)	296, 384
AcsI	RAATTY	1 cut(s)	29
AcuI	CTGAAG	1 cut(s)	255
AfaI	GTAC	2 cut(s)	24, 822
AfeI	AGCGCT	1 cut(s)	198
AflII	CTTAAG	1 cut(s)	101
AgsI	TTSAA	4 cut(s)	76, 950, 958, 969
AhlI	ACTAGT	1 cut(s)	800
AjnI	CCWGG	1 cut(s)	33
AloI	GAACNNNNNNTCC	2 cut(s)	30, 62
AluBI	AGCT	4 cut(s)	239, 275, 704, 725
AluI	AGCT	4 cut(s)	239, 275, 704, 725
Alw26I	GTCTC	1 cut(s)	308
AlwI	GGATC	2 cut(s)	296, 384
AlwNI	CAGNNNCTG	1 cut(s)	728
Ama87I	CYCGRG	1 cut(s)	877
Aor51HI	AGCGCT	1 cut(s)	198
ApeKI	GCWGC	7 cut(s)	623, 704, 707, 722, 725, 902, 905
ApoI	RAATTY	1 cut(s)	29
AspLEI	GCGC	4 cut(s)	199, 311, 397, 589
AspS9I	GGNCC	3 cut(s)	266, 314, 918
AsuC2I	CCSGG	2 cut(s)	233, 373
AsuHPI	GGTGA	2 cut(s)	472, 494
AvaI	CYCGRG	1 cut(s)	877
AvaII	GGWCC	3 cut(s)	266, 314, 918
BaeI	ACNNNNGTAYC	1 cut(s)	39
BbvI	GCAGC	7 cut(s)	610, 691, 694, 712, 734, 914, 917
BccI	CCATC	6 cut(s)	89, 185, 472, 634, 839, 864
BceAI	ACGGC	3 cut(s)	311, 574, 612
BcgI	CGANNNNNNTGC	2 cut(s)	182, 216
BciT130I	CCWGG	1 cut(s)	35
BciVI	GTATCC	1 cut(s)	842
BcnI	CCSGG	2 cut(s)	233, 373
BcoDI	GTCTC	1 cut(s)	308
BcuI	ACTAGT	1 cut(s)	800
BfaI	CTAG	1 cut(s)	801
BfmI	CTRYAG	1 cut(s)	900
BfoI	RGCGCY	2 cut(s)	200, 312
BfrI	CTTAAG	1 cut(s)	101
BfuAI	ACCTGC	2 cut(s)	43, 325
BfuI	GTATCC	1 cut(s)	842
BisI	GCNGC	8 cut(s)	624, 705, 708, 723, 726, 740, 903, 906
BlsI	GCNGC	8 cut(s)	625, 706, 709, 724, 727, 741, 904, 907
Bme1390I	CCNGG	3 cut(s)	35, 233, 373
Bme18I	GGWCC	3 cut(s)	266, 314, 918
BmeT110I	CYCGRG	1 cut(s)	877
BmgT120I	GGNCC	3 cut(s)	266, 314, 918
BmiI	GGNNCC	3 cut(s)	39, 142, 875
BmrFI	CCNGG	3 cut(s)	35, 233, 373
BmsI	GCATC	1 cut(s)	424
BpmI	CTGGAG	1 cut(s)	720
BpuMI	CCSGG	2 cut(s)	233, 373
BsaI	GGTCTC	1 cut(s)	308
BsaJI	CCNNGG	2 cut(s)	372, 450
BsaWI	WCCGGW	2 cut(s)	67, 79
BsaXI	ACNNNNNCTCC	2 cut(s)	30, 60
Bse3DI	GCAATG	1 cut(s)	773
BseBI	CCWGG	1 cut(s)	35
BseDI	CCNNGG	2 cut(s)	372, 450
BseGI	GGATG	2 cut(s)	791, 875
BseMI	GCAATG	1 cut(s)	773
BseMII	CTCAG	1 cut(s)	74
BseXI	GCAGC	7 cut(s)	610, 691, 694, 712, 734, 914, 917
Bsh1236I	CGCG	3 cut(s)	285, 395, 587
BsiHKCI	CYCGRG	1 cut(s)	877
BsiSI	CCGG	7 cut(s)	49, 68, 80, 232, 372, 408, 653
BslFI	GGGAC	2 cut(s)	195, 502
BsmAI	GTCTC	1 cut(s)	308
BsmFI	GGGAC	2 cut(s)	195, 502
BsmI	GAATGC	1 cut(s)	888
Bso31I	GGTCTC	1 cut(s)	308
BsoBI	CYCGRG	1 cut(s)	877
Bsp143I	GATC	3 cut(s)	43, 288, 376
Bsp19I	CCATGG	1 cut(s)	450
BspACI	CCGC	5 cut(s)	285, 369, 696, 740, 793
BspCNI	CTCAG	1 cut(s)	73
BspFNI	CGCG	3 cut(s)	285, 395, 587
BspLI	GGNNCC	3 cut(s)	39, 142, 875
BspMAI	CTGCAG	1 cut(s)	904
BspMI	ACCTGC	2 cut(s)	43, 325
BspPI	GGATC	2 cut(s)	296, 384
BspQI	GCTCTTC	1 cut(s)	893
BspTI	CTTAAG	1 cut(s)	101
BspTNI	GGTCTC	1 cut(s)	308
BsrDI	GCAATG	1 cut(s)	773
BssECI	CCNNGG	2 cut(s)	372, 450
BssMI	GATC	3 cut(s)	43, 288, 376
BssT1I	CCWWGG	1 cut(s)	450
Bst2UI	CCWGG	1 cut(s)	35
Bst4CI	ACNGT	2 cut(s)	22, 574
Bst6I	CTCTTC	1 cut(s)	893
BstAFI	CTTAAG	1 cut(s)	101
BstAPI	GCANNNNNTGC	1 cut(s)	472
BstC8I	GCNNGC	3 cut(s)	139, 195, 399
BstDEI	CTNAG	4 cut(s)	60, 627, 824, 863
BstDSI	CCRYGG	1 cut(s)	450
BstF5I	GGATG	2 cut(s)	791, 875
BstFNI	CGCG	3 cut(s)	285, 395, 587
BstH2I	RGCGCY	2 cut(s)	200, 312
BstHHI	GCGC	4 cut(s)	199, 311, 397, 589
BstKTI	GATC	3 cut(s)	46, 291, 379
BstMAI	GTCTC	1 cut(s)	308
BstMBI	GATC	3 cut(s)	43, 288, 376
BstMWI	GCNNNNNNNGC	6 cut(s)	11, 317, 472, 554, 704, 902
BstNI	CCWGG	1 cut(s)	35
BstNSI	RCATGY	1 cut(s)	401
BstSCI	CCNGG	3 cut(s)	33, 231, 371
BstSFI	CTRYAG	1 cut(s)	900
BstUI	CGCG	3 cut(s)	285, 395, 587
BstV1I	GCAGC	7 cut(s)	610, 691, 694, 712, 734, 914, 917
BstX2I	RGATCY	1 cut(s)	288
BstXI	CCANNNNNNTGG	1 cut(s)	457
BstYI	RGATCY	1 cut(s)	288
BsuI	GTATCC	1 cut(s)	842
BtgI	CCRYGG	1 cut(s)	450
BtgZI	GCGATG	3 cut(s)	173, 416, 447
BtsCI	GGATG	2 cut(s)	791, 875
BtsI	GCAGTG	1 cut(s)	972
BtsIMutI	CAGTG	1 cut(s)	972
BveI	ACCTGC	2 cut(s)	43, 325
Cac8I	GCNNGC	3 cut(s)	139, 195, 399
CaiI	CAGNNNCTG	1 cut(s)	728
CfoI	GCGC	4 cut(s)	199, 311, 397, 589
Cfr13I	GGNCC	3 cut(s)	266, 314, 918
CseI	GACGC	1 cut(s)	766
Csp6I	GTAC	2 cut(s)	23, 821
CviAII	CATG	6 cut(s)	154, 207, 398, 451, 818, 893
CviQI	GTAC	2 cut(s)	23, 821
DdeI	CTNAG	4 cut(s)	60, 627, 824, 863
DpnI	GATC	3 cut(s)	45, 290, 378
DpnII	GATC	3 cut(s)	43, 288, 376
DrdI	GACNNNNNNGTC	1 cut(s)	959
DseDI	GACNNNNNNGTC	1 cut(s)	959
Eam1104I	CTCTTC	1 cut(s)	893
EarI	CTCTTC	1 cut(s)	893
EciI	GGCGGA	1 cut(s)	358
Eco130I	CCWWGG	1 cut(s)	450
Eco31I	GGTCTC	1 cut(s)	308
Eco47I	GGWCC	3 cut(s)	266, 314, 918
Eco47III	AGCGCT	1 cut(s)	198
Eco57I	CTGAAG	1 cut(s)	255
Eco88I	CYCGRG	1 cut(s)	877
EcoO109I	RGGNCCY	1 cut(s)	266
EcoRII	CCWGG	1 cut(s)	33
EcoT14I	CCWWGG	1 cut(s)	450
ErhI	CCWWGG	1 cut(s)	450
FaeI	CATG	6 cut(s)	157, 210, 401, 454, 821, 896
FaqI	GGGAC	2 cut(s)	195, 502
FatI	CATG	6 cut(s)	153, 206, 397, 450, 817, 892
FauI	CCCGC	1 cut(s)	278
FauNDI	CATATG	1 cut(s)	189
Fnu4HI	GCNGC	8 cut(s)	624, 705, 708, 723, 726, 740, 903, 906
FokI	GGATG	2 cut(s)	798, 882
Fsp4HI	GCNGC	8 cut(s)	624, 705, 708, 723, 726, 740, 903, 906
FspBI	CTAG	1 cut(s)	801
GlaI	GCGC	4 cut(s)	198, 310, 396, 588
GluI	GCNGC	8 cut(s)	624, 705, 708, 723, 726, 740, 903, 906
GsuI	CTGGAG	1 cut(s)	720
HaeII	RGCGCY	2 cut(s)	200, 312
HapII	CCGG	7 cut(s)	49, 68, 80, 232, 372, 408, 653
HgaI	GACGC	1 cut(s)	766
HhaI	GCGC	4 cut(s)	199, 311, 397, 589
Hin1II	CATG	6 cut(s)	157, 210, 401, 454, 821, 896
Hin6I	GCGC	4 cut(s)	197, 309, 395, 587
HinP1I	GCGC	4 cut(s)	197, 309, 395, 587
HindIII	AAGCTT	1 cut(s)	237
HinfI	GANTC	3 cut(s)	228, 501, 965
HpaII	CCGG	7 cut(s)	49, 68, 80, 232, 372, 408, 653
HphI	GGTGA	2 cut(s)	472, 494
Hpy166II	GTNNAC	5 cut(s)	331, 594, 604, 688, 921
Hpy188I	TCNGA	4 cut(s)	63, 227, 381, 579
Hpy188III	TCNNGA	5 cut(s)	92, 181, 754, 877, 950
Hpy8I	GTNNAC	5 cut(s)	331, 594, 604, 688, 921
Hpy99I	CGWCG	5 cut(s)	149, 173, 227, 395, 574
HpyAV	CCTTC	7 cut(s)	257, 279, 479, 530, 625, 668, 923
HpyCH4III	ACNGT	2 cut(s)	22, 574
HpyCH4V	TGCA	4 cut(s)	193, 475, 766, 902
HpyF10VI	GCNNNNNNNGC	6 cut(s)	11, 317, 472, 554, 704, 902
HpyF3I	CTNAG	4 cut(s)	60, 627, 824, 863
Hsp92II	CATG	6 cut(s)	157, 210, 401, 454, 821, 896
HspAI	GCGC	4 cut(s)	197, 309, 395, 587
Kzo9I	GATC	3 cut(s)	43, 288, 376
LguI	GCTCTTC	1 cut(s)	893
LmnI	GCTCC	4 cut(s)	146, 701, 879, 901
Lsp1109I	GCAGC	7 cut(s)	610, 691, 694, 712, 734, 914, 917
LweI	GCATC	1 cut(s)	424
MaeI	CTAG	1 cut(s)	801
MaeIII	GTNAC	2 cut(s)	730, 788
MalI	GATC	3 cut(s)	45, 290, 378
MboI	GATC	3 cut(s)	43, 288, 376
MboII	GAAGA	2 cut(s)	367, 880
MflI	RGATCY	1 cut(s)	288
MluCI	AATT	4 cut(s)	29, 113, 385, 660
MlyI	GAGTC	1 cut(s)	510
MmeI	TCCRAC	1 cut(s)	205
MnlI	CCTC	7 cut(s)	4, 462, 513, 526, 613, 664, 848
MseI	TTAA	4 cut(s)	102, 215, 516, 936
MslI	CAYNNNNRTG	3 cut(s)	158, 449, 455
MspA1I	CMGCKG	2 cut(s)	698, 725
MspCI	CTTAAG	1 cut(s)	101
MspI	CCGG	7 cut(s)	49, 68, 80, 232, 372, 408, 653
MspR9I	CCNGG	3 cut(s)	35, 233, 373
Mva1269I	GAATGC	1 cut(s)	888
MvaI	CCWGG	1 cut(s)	35
MvnI	CGCG	3 cut(s)	285, 395, 587
MwoI	GCNNNNNNNGC	6 cut(s)	11, 317, 472, 554, 704, 902
NciI	CCSGG	2 cut(s)	233, 373
NcoI	CCATGG	1 cut(s)	450
NdeI	CATATG	1 cut(s)	189
NdeII	GATC	3 cut(s)	43, 288, 376
NlaIII	CATG	6 cut(s)	157, 210, 401, 454, 821, 896
NlaIV	GGNNCC	3 cut(s)	39, 142, 875
NmeAIII	GCCGAG	1 cut(s)	285
NmuCI	GTSAC	2 cut(s)	730, 788
NspI	RCATGY	1 cut(s)	401
PaeI	GCATGC	1 cut(s)	401
PciSI	GCTCTTC	1 cut(s)	893
PctI	GAATGC	1 cut(s)	888
PfeI	GAWTC	2 cut(s)	228, 965
PflFI	GACNNNGTC	1 cut(s)	207
PfoI	TCCNGGA	2 cut(s)	33, 231
PkrI	GCNGC	8 cut(s)	625, 706, 709, 724, 727, 741, 904, 907
PleI	GAGTC	1 cut(s)	509
PpsI	GAGTC	1 cut(s)	509
PpuMI	RGGWCCY	1 cut(s)	266
PsiI	TTATAA	1 cut(s)	495
Psp5II	RGGWCCY	1 cut(s)	266
Psp6I	CCWGG	1 cut(s)	33
PspGI	CCWGG	1 cut(s)	33
PspN4I	GGNNCC	3 cut(s)	39, 142, 875
PspPI	GGNCC	3 cut(s)	266, 314, 918
PspPPI	RGGWCCY	1 cut(s)	266
PstI	CTGCAG	1 cut(s)	904
PstNI	CAGNNNCTG	1 cut(s)	728
PsuI	RGATCY	1 cut(s)	288
PsyI	GACNNNGTC	1 cut(s)	207
PvuII	CAGCTG	1 cut(s)	725
RsaI	GTAC	2 cut(s)	24, 822
RsaNI	GTAC	2 cut(s)	23, 821
RseI	CAYNNNNRTG	3 cut(s)	158, 449, 455
SapI	GCTCTTC	1 cut(s)	893
SaqAI	TTAA	4 cut(s)	102, 215, 516, 936
SatI	GCNGC	8 cut(s)	624, 705, 708, 723, 726, 740, 903, 906
Sau3AI	GATC	3 cut(s)	43, 288, 376
Sau96I	GGNCC	3 cut(s)	266, 314, 918
SchI	GAGTC	1 cut(s)	510
ScrFI	CCNGG	3 cut(s)	35, 233, 373
SfaNI	GCATC	1 cut(s)	424
SfcI	CTRYAG	1 cut(s)	900
SinI	GGWCC	3 cut(s)	266, 314, 918
SmiMI	CAYNNNNRTG	3 cut(s)	158, 449, 455
SmlI	CTYRAG	1 cut(s)	101
SmoI	CTYRAG	1 cut(s)	101
SpeI	ACTAGT	1 cut(s)	800
SphI	GCATGC	1 cut(s)	401
Sse9I	AATT	4 cut(s)	29, 113, 385, 660
SsiI	CCGC	5 cut(s)	285, 369, 696, 740, 793
SspMI	CTAG	1 cut(s)	801
StyD4I	CCNGG	3 cut(s)	33, 231, 371
StyI	CCWWGG	1 cut(s)	450
TaaI	ACNGT	2 cut(s)	22, 574
TaqI	TCGA	7 cut(s)	131, 147, 171, 202, 248, 353, 963
TasI	AATT	4 cut(s)	29, 113, 385, 660
TatI	WGTACW	1 cut(s)	820
TauI	GCSGC	1 cut(s)	742
TfiI	GAWTC	2 cut(s)	228, 965
Tru1I	TTAA	4 cut(s)	102, 215, 516, 936
Tru9I	TTAA	4 cut(s)	102, 215, 516, 936
TscAI	CASTG	1 cut(s)	979
TseFI	GTSAC	2 cut(s)	730, 788
TseI	GCWGC	7 cut(s)	623, 704, 707, 722, 725, 902, 905
Tsp45I	GTSAC	2 cut(s)	730, 788
TspDTI	ATGAA	3 cut(s)	360, 596, 942
TspGWI	ACGGA	4 cut(s)	23, 133, 233, 379
TspRI	CASTG	1 cut(s)	979
Tth111I	GACNNNGTC	1 cut(s)	207
Vha464I	CTTAAG	1 cut(s)	101
VpaK11BI	GGWCC	3 cut(s)	266, 314, 918
XapI	RAATTY	1 cut(s)	29
XceI	RCATGY	1 cut(s)	401
XspI	CTAG	1 cut(s)	801

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.