Rmu_sc0022018.1_g000001

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0022018.1
Physical Location & Seq
Reverse (-)
1 .. 889
889 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0022018.1_g000001.1.cds

Sequence Viewer

Length: 774 bp
atgtccaccgatgcctcccccactttccggaccctctctcactctcaaaaactcgatttccaacccgaacccgttatctctgcctccacccacgacggccttcagttctggcagtacatgatcgccggctccatagctggctccgtcgagcacatggccatgttccctgttgacactctcaaaacccggatgcagatcttcggtgggtccctctccgttaaccccgtcggagtccggcaagccctgggctccattctcaagctcgaaggcccggccggtctttaccgcggaattggcgcgatgggcctcggcgccggcccggctcatgcagtctacttctccgtctacgagttctgcaaggagtacttcgcacgtggcaacccgaacaactcggcggcgcacgcggtgtccggcgtgtgcgcgacggttatgagcgacgcggtgattacgccgatggatatggtaaagcagaggctgcagttggagagtagtccttacaagggcgttggggactgtgtcaggagggttttggtggaggaaggggtgggggcgttctacaagtcgtataagaccacggtggtgatgaatgcgccgttcacggcggttcatttcgccacttacgaggcggcgaagagggggttgagtgaagtgtcgccggagagtgcgagtgatgagaggttggtggttcacgcgacggccggagcggtagccggggctttggctgcggctgtcactactcctcttgatgttgtcaaaacccaattgcagtgtcag

Protein Analysis

258

Amino Acids

27.37

Weight (kDa)

6.65

Isoelectric Point (pI)

32.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 311
AccBSI CCGCTC 1 cut(s) 704
AccI GTMKAC 2 cut(s) 333, 345
AccII CGCG 6 cut(s) 288, 299, 404, 422, 440, 692
AccIII TCCGGA 1 cut(s) 27
AciI CCGC 9 cut(s) 286, 288, 395, 404, 440, 602, 626, 704, 725
AcoI YGGCCR 3 cut(s) 156, 273, 696
AcuI CTGAAG 1 cut(s) 86
AcvI CACGTG 1 cut(s) 374
AcyI GRCGYC 1 cut(s) 312
AdeI CACNNNGTG 1 cut(s) 406
AfaI GTAC 2 cut(s) 116, 365
AfiI CCNNNNNNNGG 2 cut(s) 27, 500
AjnI CCWGG 1 cut(s) 243
AleI CACNNNNGTG 1 cut(s) 578
AluBI AGCT 2 cut(s) 137, 262
AluI AGCT 2 cut(s) 137, 262
Alw21I GWGCWC 1 cut(s) 153
AlwNI CAGNNNCTG 1 cut(s) 475
Aor13HI TCCGGA 1 cut(s) 27
AoxI GGCC 7 cut(s) 97, 156, 268, 273, 304, 316, 696
ApeKI GCWGC 2 cut(s) 475, 722
AspLEI GCGC 5 cut(s) 299, 314, 400, 422, 592
AspS9I GGNCC 5 cut(s) 30, 207, 269, 304, 317
AsuC2I CCSGG 4 cut(s) 187, 272, 320, 712
AsuHPI GGTGA 2 cut(s) 454, 592
AvaII GGWCC 2 cut(s) 30, 207
BalI TGGCCA 1 cut(s) 158
BanI GGYRCC 1 cut(s) 311
BanII GRGCYC 1 cut(s) 251
BbrPI CACGTG 1 cut(s) 374
Bbv12I GWGCWC 1 cut(s) 153
BbvI GCAGC 2 cut(s) 462, 709
BccI CCATC 2 cut(s) 295, 448
BceAI ACGGC 4 cut(s) 112, 577, 615, 711
BciT130I CCWGG 1 cut(s) 245
BcnI CCSGG 4 cut(s) 187, 272, 320, 712
BfmI CTRYAG 1 cut(s) 476
BfoI RGCGCY 1 cut(s) 315
BglI GCCNNNNNGGC 1 cut(s) 320
BglII AGATCT 1 cut(s) 195
BisI GCNGC 5 cut(s) 396, 476, 627, 723, 726
BlsI GCNGC 5 cut(s) 397, 477, 628, 724, 727
BmcAI AGTACT 1 cut(s) 365
Bme1390I CCNGG 5 cut(s) 187, 245, 272, 320, 712
Bme18I GGWCC 2 cut(s) 30, 207
BmgT120I GGNCC 5 cut(s) 30, 207, 269, 304, 317
BmiI GGNNCC 7 cut(s) 32, 130, 142, 208, 209, 250, 313
BmrFI CCNGG 5 cut(s) 187, 245, 272, 320, 712
BmsI GCATC 1 cut(s) 180
BpuEI CTTGAG 1 cut(s) 242
BpuMI CCSGG 4 cut(s) 187, 272, 320, 712
BsaAI YACGTR 1 cut(s) 374
BsaBI GATNNNNATC 1 cut(s) 194
BsaHI GRCGYC 1 cut(s) 312
BsaJI CCNNGG 6 cut(s) 243, 244, 286, 307, 573, 711
BsaWI WCCGGW 1 cut(s) 27
Bsc4I CCNNNNNNNGG 2 cut(s) 27, 500
Bse118I RCCGGY 3 cut(s) 125, 275, 314
Bse8I GATNNNNATC 1 cut(s) 194
BseAI TCCGGA 1 cut(s) 27
BseBI CCWGG 1 cut(s) 245
BseDI CCNNGG 6 cut(s) 243, 244, 286, 307, 573, 711
BseGI GGATG 1 cut(s) 195
BseJI GATNNNNATC 1 cut(s) 194
BseLI CCNNNNNNNGG 2 cut(s) 27, 500
BseRI GAGGAG 1 cut(s) 729
BseX3I CGGCCG 2 cut(s) 273, 696
BseXI GCAGC 2 cut(s) 462, 709
Bsh1236I CGCG 6 cut(s) 288, 299, 404, 422, 440, 692
Bsh1285I CGRYCG 2 cut(s) 276, 699
BshFI GGCC 7 cut(s) 99, 158, 270, 275, 306, 318, 698
BshNI GGYRCC 1 cut(s) 311
BsiEI CGRYCG 2 cut(s) 276, 699
BsiHKAI GWGCWC 1 cut(s) 153
BslFI GGGAC 2 cut(s) 193, 524
BslI CCNNNNNNNGG 2 cut(s) 27, 500
BsmFI GGGAC 2 cut(s) 193, 524
BsmI GAATGC 1 cut(s) 592
BsnI GGCC 7 cut(s) 99, 158, 270, 275, 306, 318, 698
Bsp1286I GDGCHC 2 cut(s) 153, 251
Bsp13I TCCGGA 1 cut(s) 27
Bsp143I GATC 2 cut(s) 120, 195
BspACI CCGC 9 cut(s) 286, 288, 395, 404, 440, 602, 626, 704, 725
BspANI GGCC 7 cut(s) 99, 158, 270, 275, 306, 318, 698
BspEI TCCGGA 1 cut(s) 27
BspFNI CGCG 6 cut(s) 288, 299, 404, 422, 440, 692
BspLI GGNNCC 7 cut(s) 32, 130, 142, 208, 209, 250, 313
BspMAI CTGCAG 1 cut(s) 480
BspT107I GGYRCC 1 cut(s) 311
BsrBI CCGCTC 1 cut(s) 704
BsrFI RCCGGY 3 cut(s) 125, 275, 314
BssAI RCCGGY 3 cut(s) 125, 275, 314
BssECI CCNNGG 6 cut(s) 243, 244, 286, 307, 573, 711
BssMI GATC 2 cut(s) 120, 195
BssNI GRCGYC 1 cut(s) 312
Bst2UI CCWGG 1 cut(s) 245
Bst4CI ACNGT 3 cut(s) 427, 515, 577
Bst6I CTCTTC 1 cut(s) 626
BstACI GRCGYC 1 cut(s) 312
BstAPI GCANNNNNTGC 1 cut(s) 475
BstBAI YACGTR 1 cut(s) 374
BstC8I GCNNGC 5 cut(s) 127, 139, 240, 316, 402
BstDSI CCRYGG 2 cut(s) 286, 573
BstF5I GGATG 1 cut(s) 195
BstFNI CGCG 6 cut(s) 288, 299, 404, 422, 440, 692
BstH2I RGCGCY 1 cut(s) 315
BstHHI GCGC 5 cut(s) 299, 314, 400, 422, 592
BstKTI GATC 2 cut(s) 123, 198
BstMBI GATC 2 cut(s) 120, 195
BstMCI CGRYCG 2 cut(s) 276, 699
BstMWI GCNNNNNNNGC 6 cut(s) 294, 303, 320, 401, 475, 722
BstNI CCWGG 1 cut(s) 245
BstSCI CCNGG 5 cut(s) 185, 243, 270, 318, 710
BstSFI CTRYAG 1 cut(s) 476
BstUI CGCG 6 cut(s) 288, 299, 404, 422, 440, 692
BstV1I GCAGC 2 cut(s) 462, 709
BstX2I RGATCY 1 cut(s) 195
BstYI RGATCY 1 cut(s) 195
BstZI CGGCCG 2 cut(s) 273, 696
BsuRI GGCC 7 cut(s) 99, 158, 270, 275, 306, 318, 698
BtgI CCRYGG 2 cut(s) 286, 573
BtgZI GCGATG 1 cut(s) 314
BtsCI GGATG 1 cut(s) 195
BtsI GCAGTG 1 cut(s) 773
BtsIMutI CAGTG 1 cut(s) 773
Cac8I GCNNGC 5 cut(s) 127, 139, 240, 316, 402
CaiI CAGNNNCTG 1 cut(s) 475
CfoI GCGC 5 cut(s) 299, 314, 400, 422, 592
Cfr10I RCCGGY 3 cut(s) 125, 275, 314
Cfr13I GGNCC 5 cut(s) 30, 207, 269, 304, 317
Cfr42I CCGCGG 1 cut(s) 289
CseI GACGC 1 cut(s) 446
Csp6I GTAC 2 cut(s) 115, 364
CviAII CATG 4 cut(s) 118, 154, 160, 326
CviQI GTAC 2 cut(s) 115, 364
DinI GGCGCC 1 cut(s) 313
DpnI GATC 2 cut(s) 122, 197
DpnII GATC 2 cut(s) 120, 195
DraIII CACNNNGTG 1 cut(s) 406
EaeI YGGCCR 3 cut(s) 156, 273, 696
EagI CGGCCG 2 cut(s) 273, 696
Eam1104I CTCTTC 1 cut(s) 626
EarI CTCTTC 1 cut(s) 626
EclXI CGGCCG 2 cut(s) 273, 696
Eco24I GRGCYC 1 cut(s) 251
Eco47I GGWCC 2 cut(s) 30, 207
Eco52I CGGCCG 2 cut(s) 273, 696
Eco57I CTGAAG 1 cut(s) 86
Eco72I CACGTG 1 cut(s) 374
EcoO109I RGGNCCY 1 cut(s) 207
EcoRII CCWGG 1 cut(s) 243
EcoT38I GRGCYC 1 cut(s) 251
EgeI GGCGCC 1 cut(s) 313
EheI GGCGCC 1 cut(s) 313
FaeI CATG 4 cut(s) 121, 157, 163, 329
FaiI YATR 8 cut(s) 119, 134, 155, 161, 327, 431, 461, 567
FalI AAGNNNNNCTT 2 cut(s) 350, 382
FaqI GGGAC 2 cut(s) 193, 524
FatI CATG 4 cut(s) 117, 153, 159, 325
FblI GTMKAC 2 cut(s) 333, 345
Fnu4HI GCNGC 5 cut(s) 396, 476, 627, 723, 726
FokI GGATG 1 cut(s) 202
FriOI GRGCYC 1 cut(s) 251
Fsp4HI GCNGC 5 cut(s) 396, 476, 627, 723, 726
GlaI GCGC 5 cut(s) 298, 313, 399, 421, 591
GluI GCNGC 5 cut(s) 396, 476, 627, 723, 726
HaeII RGCGCY 1 cut(s) 315
HaeIII GGCC 7 cut(s) 99, 158, 270, 275, 306, 318, 698
HgaI GACGC 1 cut(s) 446
HhaI GCGC 5 cut(s) 299, 314, 400, 422, 592
Hin1I GRCGYC 1 cut(s) 312
Hin1II CATG 4 cut(s) 121, 157, 163, 329
Hin6I GCGC 5 cut(s) 297, 312, 398, 420, 590
HinP1I GCGC 5 cut(s) 297, 312, 398, 420, 590
HincII GTYRAC 2 cut(s) 172, 220
HindII GTYRAC 2 cut(s) 172, 220
HinfI GANTC 1 cut(s) 231
HpaI GTTAAC 1 cut(s) 220
HphI GGTGA 2 cut(s) 454, 592
Hpy166II GTNNAC 7 cut(s) 6, 172, 220, 334, 346, 597, 688
Hpy188I TCNGA 1 cut(s) 230
Hpy188III TCNNGA 3 cut(s) 28, 520, 743
Hpy8I GTNNAC 7 cut(s) 6, 172, 220, 334, 346, 597, 688
Hpy99I CGWCG 6 cut(s) 98, 149, 230, 427, 440, 697
HpyAV CCTTC 3 cut(s) 110, 260, 533
HpyCH4III ACNGT 3 cut(s) 427, 515, 577
HpyCH4IV ACGT 1 cut(s) 373
HpyCH4V TGCA 5 cut(s) 193, 329, 357, 478, 766
HpyF10VI GCNNNNNNNGC 6 cut(s) 294, 303, 320, 401, 475, 722
HpySE526I ACGT 1 cut(s) 373
Hsp92I GRCGYC 1 cut(s) 312
Hsp92II CATG 4 cut(s) 121, 157, 163, 329
HspAI GCGC 5 cut(s) 297, 312, 398, 420, 590
KasI GGCGCC 1 cut(s) 311
KflI GGGWCCC 1 cut(s) 207
Kpn2I TCCGGA 1 cut(s) 27
KroI GCCGGC 2 cut(s) 125, 314
KroNI GCCGGC 2 cut(s) 127, 316
KspAI GTTAAC 1 cut(s) 220
KspI CCGCGG 1 cut(s) 289
Kzo9I GATC 2 cut(s) 120, 195
LmnI GCTCC 4 cut(s) 134, 146, 254, 701
Lsp1109I GCAGC 2 cut(s) 462, 709
LweI GCATC 1 cut(s) 180
MaeII ACGT 1 cut(s) 373
MaeIII GTNAC 1 cut(s) 730
MalI GATC 2 cut(s) 122, 197
MbiI CCGCTC 1 cut(s) 704
MboI GATC 2 cut(s) 120, 195
MboII GAAGA 2 cut(s) 190, 643
MfeI CAATTG 1 cut(s) 761
MflI RGATCY 1 cut(s) 195
MhlI GDGCHC 2 cut(s) 153, 251
MlsI TGGCCA 1 cut(s) 158
MluCI AATT 2 cut(s) 291, 761
MluNI TGGCCA 1 cut(s) 158
Mly113I GGCGCC 1 cut(s) 312
MlyI GAGTC 1 cut(s) 240
MmeI TCCRAC 3 cut(s) 85, 208, 462
Mox20I TGGCCA 1 cut(s) 158
MroI TCCGGA 1 cut(s) 27
MroNI GCCGGC 2 cut(s) 125, 314
MscI TGGCCA 1 cut(s) 158
MseI TTAA 1 cut(s) 219
MslI CAYNNNNRTG 2 cut(s) 158, 578
Msp20I TGGCCA 1 cut(s) 158
MspA1I CMGCKG 1 cut(s) 288
MspR9I CCNGG 5 cut(s) 187, 245, 272, 320, 712
MunI CAATTG 1 cut(s) 761
Mva1269I GAATGC 1 cut(s) 592
MvaI CCWGG 1 cut(s) 245
MvnI CGCG 6 cut(s) 288, 299, 404, 422, 440, 692
MwoI GCNNNNNNNGC 6 cut(s) 294, 303, 320, 401, 475, 722
NaeI GCCGGC 2 cut(s) 127, 316
NarI GGCGCC 1 cut(s) 312
NciI CCSGG 4 cut(s) 187, 272, 320, 712
NdeII GATC 2 cut(s) 120, 195
NgoMIV GCCGGC 2 cut(s) 125, 314
NlaIII CATG 4 cut(s) 121, 157, 163, 329
NlaIV GGNNCC 7 cut(s) 32, 130, 142, 208, 209, 250, 313
NmeAIII GCCGAG 2 cut(s) 288, 371
NmuCI GTSAC 1 cut(s) 730
OliI CACNNNNGTG 1 cut(s) 578
PasI CCCWGGG 1 cut(s) 244
PcsI WCGNNNNNNNCGW 1 cut(s) 618
PctI GAATGC 1 cut(s) 592
PdiI GCCGGC 2 cut(s) 127, 316
PflFI GACNNNGTC 1 cut(s) 515
PkrI GCNGC 5 cut(s) 397, 477, 628, 724, 727
PleI GAGTC 1 cut(s) 239
PluTI GGCGCC 1 cut(s) 315
PmaCI CACGTG 1 cut(s) 374
PmlI CACGTG 1 cut(s) 374
PpsI GAGTC 1 cut(s) 239
Ppu21I YACGTR 1 cut(s) 374
PpuMI RGGWCCY 1 cut(s) 207
Psp5II RGGWCCY 1 cut(s) 207
Psp6I CCWGG 1 cut(s) 243
PspCI CACGTG 1 cut(s) 374
PspGI CCWGG 1 cut(s) 243
PspN4I GGNNCC 7 cut(s) 32, 130, 142, 208, 209, 250, 313
PspPI GGNCC 5 cut(s) 30, 207, 269, 304, 317
PspPPI RGGWCCY 1 cut(s) 207
PstI CTGCAG 1 cut(s) 480
PstNI CAGNNNCTG 1 cut(s) 475
PsuI RGATCY 1 cut(s) 195
PsyI GACNNNGTC 1 cut(s) 515
RsaI GTAC 2 cut(s) 116, 365
RsaNI GTAC 2 cut(s) 115, 364
RseI CAYNNNNRTG 2 cut(s) 158, 578
SacII CCGCGG 1 cut(s) 289
SaqAI TTAA 1 cut(s) 219
SatI GCNGC 5 cut(s) 396, 476, 627, 723, 726
Sau3AI GATC 2 cut(s) 120, 195
Sau96I GGNCC 5 cut(s) 30, 207, 269, 304, 317
ScaI AGTACT 1 cut(s) 365
SchI GAGTC 1 cut(s) 240
ScrFI CCNGG 5 cut(s) 187, 245, 272, 320, 712
SduI GDGCHC 2 cut(s) 153, 251
SetI ASST 4 cut(s) 139, 264, 376, 680
SfaNI GCATC 1 cut(s) 180
SfcI CTRYAG 1 cut(s) 476
SfoI GGCGCC 1 cut(s) 313
Sfr303I CCGCGG 1 cut(s) 289
SgrBI CCGCGG 1 cut(s) 289
SinI GGWCC 2 cut(s) 30, 207
SmiMI CAYNNNNRTG 2 cut(s) 158, 578
SmlI CTYRAG 1 cut(s) 257
SmoI CTYRAG 1 cut(s) 257
Sse9I AATT 2 cut(s) 291, 761
SsiI CCGC 9 cut(s) 286, 288, 395, 404, 440, 602, 626, 704, 725
SspDI GGCGCC 1 cut(s) 311
StyD4I CCNGG 5 cut(s) 185, 243, 270, 318, 710
TaaI ACNGT 3 cut(s) 427, 515, 577
TaiI ACGT 1 cut(s) 376
TaqI TCGA 3 cut(s) 54, 147, 264
TasI AATT 2 cut(s) 291, 761
TatI WGTACW 2 cut(s) 114, 363
TauI GCSGC 3 cut(s) 398, 629, 728
Tru1I TTAA 1 cut(s) 219
Tru9I TTAA 1 cut(s) 219
TscAI CASTG 1 cut(s) 773
TseFI GTSAC 1 cut(s) 730
TseI GCWGC 2 cut(s) 475, 722
Tsp45I GTSAC 1 cut(s) 730
TspDTI ATGAA 2 cut(s) 596, 599
TspGWI ACGGA 3 cut(s) 133, 205, 331
TspRI CASTG 1 cut(s) 773
Tth111I GACNNNGTC 1 cut(s) 515
VpaK11BI GGWCC 2 cut(s) 30, 207
XmiI GTMKAC 2 cut(s) 333, 345
ZrmI AGTACT 1 cut(s) 365
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.