pycom11g04760

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
3644373 .. 3646339
1967 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g04760.1

Sequence Viewer

Length: 999 bp
ATGGCCACCGACGCCACCGCCAAGTTCCAAAACCAGGACTTTCACCCGGTTCCGAAGCCCCCGGATTACCTCCCAACCCCCACAGTCTCGCCCCACGACGGTCTCCACTTTTGGCAGTTCATGATCGCCGGTTCAATTGCTGGCATGGTCGAACACATGGCTATGTTCCCGGTGGACACCGTTAAAACCCATATGCAAGCTCTCGGGTCGTGCCCGATTAAGTCCGTCGGACTCCGGCAGGCCCTTCGGTCAATTTTGAAGTCCGAGGGCCCTGCCGGGCTCTACCGCGGGATTGGAGCTATGGGACTCGGCGCGGGCCCGGCACACGCTGTCTACTTCTCGGTGTACGAGACGAGCAAGAAGTTTTTCTCGGGCGGGAACCCGAACAACCCGGTTGCCCACGCGATTTCCGGCGTGTTCGCAACGGTGGCGAGTGACGCTGTTTTTACCCCGATGGATATGGTGAAGCAGAGGTTGCAGCTGGGGACTAATTTGCACAGCCCGTACAAGGGGGTGTGGGATTGTGTGGGGAAGGTGTTCAAGGAAGATGGGTTTAGGGCGTTTTACGCTTCCTACAGGACGACTGTGGTGATGAATGCGCCGTACACGGCGGTGCATTTCGCGACGTACGAGGCGGCGAAGAGGGCTTTGAATGAGATTTCGCCCGAGCATGCGGATGACGAGCGGTTGATTGTTCATGCCACTGCTGGTGCTGCAGCTGGGGGGTTGGCTGCGGTGGTCACTACGCCGCTTGATGTGGTGAAAACGCAATTACAGTGTCAGGGTATTTGTGGATGTGACAGATTTAAAAGTGGTTCGATTACTGATGTTATTCAAACAATTGTGAGAAAGGATGGGTACAAAGGTCTTCTTAGGGGATGGGCTCCAAGAATGCTTTTCCATGCCCCCGCTGCTGCCATCTGCTGGTCCACCTATGAAGCCTCAAAAACCTTCTTCCAAGATCTCAATGGCAGTCGTAACAGCGGAACTATAACCTGA

Protein Analysis

333

Amino Acids

35.78

Weight (kDa)

8.81

Isoelectric Point (pI)

24.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_carr PF00153 35 - 125 6.8e-24 Mitochondrial carrier protein
Mito_carr PF00153 129 - 219 1.3e-22 Mitochondrial carrier protein
Mito_carr PF00153 229 - 321 1.8e-24 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 924
AccBSI CCGCTC 1 cut(s) 685
AccI GTMKAC 1 cut(s) 333
AccII CGCG 4 cut(s) 288, 314, 404, 623
AcoI YGGCCR 1 cut(s) 3
AcyI GRCGYC 1 cut(s) 12
AfaI GTAC 5 cut(s) 347, 506, 605, 629, 860
AfiI CCNNNNNNNGG 5 cut(s) 34, 98, 508, 509, 924
AgsI TTSAA 5 cut(s) 135, 259, 541, 652, 836
AjnI CCWGG 1 cut(s) 33
AleI CACNNNNGTG 1 cut(s) 611
AluBI AGCT 4 cut(s) 200, 299, 481, 719
AluI AGCT 4 cut(s) 200, 299, 481, 719
Alw26I GTCTC 3 cut(s) 91, 107, 344
Ama87I CYCGRG 3 cut(s) 203, 370, 665
AoxI GGCC 4 cut(s) 3, 240, 268, 316
ApaI GGGCCC 2 cut(s) 272, 320
ApeKI GCWGC 6 cut(s) 478, 713, 716, 731, 911, 914
Asp700I GAANNNNTTC 2 cut(s) 365, 536
AspLEI GCGC 2 cut(s) 314, 601
AspS9I GGNCC 6 cut(s) 241, 268, 269, 316, 317, 927
AsuC2I CCSGG 6 cut(s) 47, 62, 170, 277, 320, 392
AsuHPI GGTGA 4 cut(s) 35, 475, 601, 772
AvaI CYCGRG 3 cut(s) 203, 370, 665
AvaII GGWCC 1 cut(s) 927
BaeGI GKGCMC 3 cut(s) 215, 272, 320
BaeI ACNNNNGTAYC 2 cut(s) 850, 883
BalI TGGCCA 1 cut(s) 5
BanII GRGCYC 4 cut(s) 272, 282, 320, 886
BbsI GAAGAC 1 cut(s) 860
BbvI GCAGC 6 cut(s) 490, 700, 718, 728, 898, 901
BccI CCATC 5 cut(s) 448, 542, 848, 873, 926
BceAI ACGGC 2 cut(s) 586, 624
BcgI CGANNNNNNTGC 4 cut(s) 227, 254, 261, 288
BciT130I CCWGG 1 cut(s) 35
BcnI CCSGG 6 cut(s) 47, 62, 170, 277, 320, 392
BcoDI GTCTC 3 cut(s) 91, 107, 344
BfmI CTRYAG 2 cut(s) 574, 714
BglII AGATCT 1 cut(s) 961
BisI GCNGC 8 cut(s) 479, 636, 714, 717, 732, 749, 912, 915
BlsI GCNGC 8 cut(s) 480, 637, 715, 718, 733, 750, 913, 916
Bme1390I CCNGG 7 cut(s) 35, 47, 62, 170, 277, 320, 392
Bme18I GGWCC 1 cut(s) 927
BmeT110I CYCGRG 3 cut(s) 203, 370, 665
BmgT120I GGNCC 6 cut(s) 241, 268, 269, 316, 317, 927
BmiI GGNNCC 5 cut(s) 51, 270, 318, 380, 885
BmrFI CCNGG 7 cut(s) 35, 47, 62, 170, 277, 320, 392
BpiI GAAGAC 1 cut(s) 860
BpuMI CCSGG 6 cut(s) 47, 62, 170, 277, 320, 392
BsaHI GRCGYC 1 cut(s) 12
BsaI GGTCTC 1 cut(s) 107
BsaJI CCNNGG 3 cut(s) 60, 264, 286
Bsc4I CCNNNNNNNGG 5 cut(s) 34, 98, 508, 509, 924
Bse118I RCCGGY 1 cut(s) 128
BseBI CCWGG 1 cut(s) 35
BseDI CCNNGG 3 cut(s) 60, 264, 286
BseGI GGATG 4 cut(s) 682, 800, 859, 884
BseLI CCNNNNNNNGG 5 cut(s) 34, 98, 508, 509, 924
BseSI GKGCMC 3 cut(s) 215, 272, 320
BseXI GCAGC 6 cut(s) 490, 700, 718, 728, 898, 901
BseYI CCCAGC 2 cut(s) 481, 719
Bsh1236I CGCG 4 cut(s) 288, 314, 404, 623
BshFI GGCC 4 cut(s) 5, 242, 270, 318
BsiHKCI CYCGRG 3 cut(s) 203, 370, 665
BsiSI CCGG 9 cut(s) 47, 62, 129, 170, 235, 276, 320, 392, 411
BsiWI CGTACG 1 cut(s) 627
BslFI GGGAC 2 cut(s) 318, 499
BslI CCNNNNNNNGG 5 cut(s) 34, 98, 508, 509, 924
BsmAI GTCTC 3 cut(s) 91, 107, 344
BsmBI CGTCTC 1 cut(s) 344
BsmFI GGGAC 2 cut(s) 318, 499
BsmI GAATGC 2 cut(s) 601, 897
BsnI GGCC 4 cut(s) 5, 242, 270, 318
Bso31I GGTCTC 1 cut(s) 107
BsoBI CYCGRG 3 cut(s) 203, 370, 665
Bsp120I GGGCCC 2 cut(s) 268, 316
Bsp1286I GDGCHC 5 cut(s) 215, 272, 282, 320, 886
Bsp143I GATC 2 cut(s) 123, 961
Bsp68I TCGCGA 1 cut(s) 623
BspANI GGCC 4 cut(s) 5, 242, 270, 318
BspFNI CGCG 4 cut(s) 288, 314, 404, 623
BspHI TCATGA 1 cut(s) 120
BspLI GGNNCC 5 cut(s) 51, 270, 318, 380, 885
BspMAI CTGCAG 1 cut(s) 718
BspTNI GGTCTC 1 cut(s) 107
BsrBI CCGCTC 1 cut(s) 685
BsrFI RCCGGY 1 cut(s) 128
BssAI RCCGGY 1 cut(s) 128
BssECI CCNNGG 3 cut(s) 60, 264, 286
BssMI GATC 2 cut(s) 123, 961
BssNI GRCGYC 1 cut(s) 12
Bst2UI CCWGG 1 cut(s) 35
Bst4CI ACNGT 6 cut(s) 85, 101, 181, 427, 586, 777
Bst6I CTCTTC 1 cut(s) 635
BstACI GRCGYC 1 cut(s) 12
BstAPI GCANNNNNTGC 1 cut(s) 475
BstC8I GCNNGC 5 cut(s) 142, 198, 240, 316, 672
BstDEI CTNAG 1 cut(s) 872
BstDSI CCRYGG 1 cut(s) 286
BstF5I GGATG 4 cut(s) 682, 800, 859, 884
BstFNI CGCG 4 cut(s) 288, 314, 404, 623
BstHHI GCGC 2 cut(s) 314, 601
BstKTI GATC 2 cut(s) 126, 964
BstMAI GTCTC 3 cut(s) 91, 107, 344
BstMBI GATC 2 cut(s) 123, 961
BstMWI GCNNNNNNNGC 9 cut(s) 11, 320, 428, 437, 475, 566, 644, 713, 911
BstNI CCWGG 1 cut(s) 35
BstNSI RCATGY 1 cut(s) 674
BstSCI CCNGG 7 cut(s) 33, 45, 60, 168, 275, 318, 390
BstSFI CTRYAG 2 cut(s) 574, 714
BstSLI GKGCMC 3 cut(s) 215, 272, 320
BstUI CGCG 4 cut(s) 288, 314, 404, 623
BstV1I GCAGC 6 cut(s) 490, 700, 718, 728, 898, 901
BstV2I GAAGAC 1 cut(s) 860
BstX2I RGATCY 1 cut(s) 961
BstYI RGATCY 1 cut(s) 961
BsuRI GGCC 4 cut(s) 5, 242, 270, 318
BtgI CCRYGG 1 cut(s) 286
BtsCI GGATG 4 cut(s) 682, 800, 859, 884
BtsI GCAGTG 1 cut(s) 702
BtsIMutI CAGTG 2 cut(s) 702, 782
BtuMI TCGCGA 1 cut(s) 623
Cac8I GCNNGC 5 cut(s) 142, 198, 240, 316, 672
CciI TCATGA 1 cut(s) 120
CfoI GCGC 2 cut(s) 314, 601
Cfr10I RCCGGY 1 cut(s) 128
Cfr13I GGNCC 6 cut(s) 241, 268, 269, 316, 317, 927
Cfr42I CCGCGG 1 cut(s) 289
CseI GACGC 2 cut(s) 20, 446
Csp6I GTAC 5 cut(s) 346, 505, 604, 628, 859
CviAII CATG 6 cut(s) 121, 145, 157, 671, 698, 902
CviQI GTAC 5 cut(s) 346, 505, 604, 628, 859
DdeI CTNAG 1 cut(s) 872
DpnI GATC 2 cut(s) 125, 963
DpnII GATC 2 cut(s) 123, 961
DraI TTTAAA 1 cut(s) 808
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 635
EarI CTCTTC 1 cut(s) 635
Eco24I GRGCYC 4 cut(s) 272, 282, 320, 886
Eco31I GGTCTC 1 cut(s) 107
Eco47I GGWCC 1 cut(s) 927
Eco88I CYCGRG 3 cut(s) 203, 370, 665
EcoO109I RGGNCCY 3 cut(s) 241, 268, 269
EcoRII CCWGG 1 cut(s) 33
EcoT38I GRGCYC 4 cut(s) 272, 282, 320, 886
Esp3I CGTCTC 1 cut(s) 344
FaeI CATG 6 cut(s) 124, 148, 160, 674, 701, 905
FalI AAGNNNNNCTT 2 cut(s) 855, 887
FaqI GGGAC 2 cut(s) 318, 499
FatI CATG 6 cut(s) 120, 144, 156, 670, 697, 901
FauI CCCGC 4 cut(s) 281, 307, 368, 916
FauNDI CATATG 1 cut(s) 192
FblI GTMKAC 1 cut(s) 333
Fnu4HI GCNGC 8 cut(s) 479, 636, 714, 717, 732, 749, 912, 915
FokI GGATG 4 cut(s) 689, 807, 866, 891
FriOI GRGCYC 4 cut(s) 272, 282, 320, 886
Fsp4HI GCNGC 8 cut(s) 479, 636, 714, 717, 732, 749, 912, 915
GlaI GCGC 2 cut(s) 313, 600
GluI GCNGC 8 cut(s) 479, 636, 714, 717, 732, 749, 912, 915
GsaI CCCAGC 2 cut(s) 485, 723
HaeIII GGCC 4 cut(s) 5, 242, 270, 318
HapII CCGG 9 cut(s) 47, 62, 129, 170, 235, 276, 320, 392, 411
HgaI GACGC 2 cut(s) 20, 446
HhaI GCGC 2 cut(s) 314, 601
Hin1I GRCGYC 1 cut(s) 12
Hin1II CATG 6 cut(s) 124, 148, 160, 674, 701, 905
Hin6I GCGC 2 cut(s) 312, 599
HinP1I GCGC 2 cut(s) 312, 599
HinfI GANTC 2 cut(s) 231, 306
HpaII CCGG 9 cut(s) 47, 62, 129, 170, 235, 276, 320, 392, 411
HphI GGTGA 4 cut(s) 35, 475, 601, 772
Hpy166II GTNNAC 5 cut(s) 175, 334, 346, 606, 930
Hpy188I TCNGA 3 cut(s) 54, 230, 265
Hpy188III TCNNGA 2 cut(s) 121, 622
Hpy8I GTNNAC 5 cut(s) 175, 334, 346, 606, 930
Hpy99I CGWCG 4 cut(s) 14, 101, 230, 628
HpyAV CCTTC 3 cut(s) 254, 526, 961
HpyCH4III ACNGT 6 cut(s) 85, 101, 181, 427, 586, 777
HpyCH4IV ACGT 1 cut(s) 626
HpyCH4V TGCA 5 cut(s) 196, 478, 496, 616, 716
HpyF10VI GCNNNNNNNGC 9 cut(s) 11, 320, 428, 437, 475, 566, 644, 713, 911
HpyF3I CTNAG 1 cut(s) 872
HpySE526I ACGT 1 cut(s) 626
Hsp92I GRCGYC 1 cut(s) 12
Hsp92II CATG 6 cut(s) 124, 148, 160, 674, 701, 905
HspAI GCGC 2 cut(s) 312, 599
KspI CCGCGG 1 cut(s) 289
Kzo9I GATC 2 cut(s) 123, 961
LmnI GCTCC 2 cut(s) 296, 889
Lsp1109I GCAGC 6 cut(s) 490, 700, 718, 728, 898, 901
MaeII ACGT 1 cut(s) 626
MaeIII GTNAC 4 cut(s) 434, 739, 797, 977
MalI GATC 2 cut(s) 125, 963
MbiI CCGCTC 1 cut(s) 685
MboI GATC 2 cut(s) 123, 961
MboII GAAGA 4 cut(s) 557, 652, 860, 946
MfeI CAATTG 2 cut(s) 135, 840
MflI RGATCY 1 cut(s) 961
MhlI GDGCHC 5 cut(s) 215, 272, 282, 320, 886
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 5 cut(s) 135, 252, 490, 770, 840
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 2 cut(s) 225, 300
MmeI TCCRAC 1 cut(s) 208
MnlI CCTC 6 cut(s) 80, 259, 465, 625, 636, 952
Mox20I TGGCCA 1 cut(s) 5
MroXI GAANNNNTTC 2 cut(s) 365, 536
MscI TGGCCA 1 cut(s) 5
MseI TTAA 3 cut(s) 183, 219, 807
MslI CAYNNNNRTG 3 cut(s) 161, 611, 675
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 5 cut(s) 288, 481, 719, 911, 984
MspI CCGG 9 cut(s) 47, 62, 129, 170, 235, 276, 320, 392, 411
MspR9I CCNGG 7 cut(s) 35, 47, 62, 170, 277, 320, 392
MunI CAATTG 2 cut(s) 135, 840
Mva1269I GAATGC 2 cut(s) 601, 897
MvaI CCWGG 1 cut(s) 35
MvnI CGCG 4 cut(s) 288, 314, 404, 623
MwoI GCNNNNNNNGC 9 cut(s) 11, 320, 428, 437, 475, 566, 644, 713, 911
NciI CCSGG 6 cut(s) 47, 62, 170, 277, 320, 392
NdeI CATATG 1 cut(s) 192
NdeII GATC 2 cut(s) 123, 961
NlaIII CATG 6 cut(s) 124, 148, 160, 674, 701, 905
NlaIV GGNNCC 5 cut(s) 51, 270, 318, 380, 885
NmeAIII GCCGAG 1 cut(s) 288
NmuCI GTSAC 3 cut(s) 434, 739, 797
NruI TCGCGA 1 cut(s) 623
NspI RCATGY 1 cut(s) 674
OliI CACNNNNGTG 1 cut(s) 611
PaeI GCATGC 1 cut(s) 674
PagI TCATGA 1 cut(s) 120
PcsI WCGNNNNNNNCGW 1 cut(s) 627
PctI GAATGC 2 cut(s) 601, 897
PdmI GAANNNNTTC 2 cut(s) 365, 536
Pfl23II CGTACG 1 cut(s) 627
PflMI CCANNNNNTGG 1 cut(s) 924
PkrI GCNGC 8 cut(s) 480, 637, 715, 718, 733, 750, 913, 916
PleI GAGTC 2 cut(s) 225, 300
PpsI GAGTC 2 cut(s) 225, 300
Psp6I CCWGG 1 cut(s) 33
PspFI CCCAGC 2 cut(s) 481, 719
PspGI CCWGG 1 cut(s) 33
PspLI CGTACG 1 cut(s) 627
PspN4I GGNNCC 5 cut(s) 51, 270, 318, 380, 885
PspOMI GGGCCC 2 cut(s) 268, 316
PspPI GGNCC 6 cut(s) 241, 268, 269, 316, 317, 927
PstI CTGCAG 1 cut(s) 718
PsuI RGATCY 1 cut(s) 961
PvuII CAGCTG 2 cut(s) 481, 719
RruI TCGCGA 1 cut(s) 623
RsaI GTAC 5 cut(s) 347, 506, 605, 629, 860
RsaNI GTAC 5 cut(s) 346, 505, 604, 628, 859
RseI CAYNNNNRTG 3 cut(s) 161, 611, 675
SacII CCGCGG 1 cut(s) 289
SaqAI TTAA 3 cut(s) 183, 219, 807
SatI GCNGC 8 cut(s) 479, 636, 714, 717, 732, 749, 912, 915
Sau3AI GATC 2 cut(s) 123, 961
Sau96I GGNCC 6 cut(s) 241, 268, 269, 316, 317, 927
SchI GAGTC 2 cut(s) 225, 300
ScrFI CCNGG 7 cut(s) 35, 47, 62, 170, 277, 320, 392
SduI GDGCHC 5 cut(s) 215, 272, 282, 320, 886
SfcI CTRYAG 2 cut(s) 574, 714
Sfr303I CCGCGG 1 cut(s) 289
SgrBI CCGCGG 1 cut(s) 289
SinI GGWCC 1 cut(s) 927
SmiMI CAYNNNNRTG 3 cut(s) 161, 611, 675
SphI GCATGC 1 cut(s) 674
Sse9I AATT 5 cut(s) 135, 252, 490, 770, 840
StyD4I CCNGG 7 cut(s) 33, 45, 60, 168, 275, 318, 390
TaaI ACNGT 6 cut(s) 85, 101, 181, 427, 586, 777
TaiI ACGT 1 cut(s) 629
TaqI TCGA 2 cut(s) 150, 818
TaqII GACCGA 1 cut(s) 237
TasI AATT 5 cut(s) 135, 252, 490, 770, 840
TauI GCSGC 2 cut(s) 638, 751
Tru1I TTAA 3 cut(s) 183, 219, 807
Tru9I TTAA 3 cut(s) 183, 219, 807
TscAI CASTG 2 cut(s) 709, 782
TseFI GTSAC 3 cut(s) 434, 739, 797
TseI GCWGC 6 cut(s) 478, 713, 716, 731, 911, 914
Tsp45I GTSAC 3 cut(s) 434, 739, 797
TspDTI ATGAA 4 cut(s) 109, 608, 686, 951
TspGWI ACGGA 1 cut(s) 214
TspRI CASTG 2 cut(s) 709, 782
Van91I CCANNNNNTGG 1 cut(s) 924
VpaK11BI GGWCC 1 cut(s) 927
XceI RCATGY 1 cut(s) 674
XcmI CCANNNNNNNNNTGG 1 cut(s) 965
XmiI GTMKAC 1 cut(s) 333
XmnI GAANNNNTTC 2 cut(s) 365, 536
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.