Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0002913

Physical Location & Seq

Genomic Coordinates Forward (+)

26388590 .. 26390638

Gene Structure 2049 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G283800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 981 bp

ATGGCCACTGATGCCTCCCCTGCATTCAGAACCGTTCCTCAACCCCACGACTTCCACCCCGAAATATCGGTATCTCTATCACCCACCCACGACGGCCTTGAGTTCAGGCAGTTCATGATTGCAGGCTCCATAGCTGGCCTAGTTGAGCACATGGCTATGTTCCCAGTAGACACCCTCAAAACCAGGATGCAGGTTTTTGGTGGGTCTTGCTCTGTTCAGCCAATCGGTGTTCGACAAGCCCTCGGATCGATTTTGAAACTTGAAGGCCTTGCAGGTCTCTACCGTGGGATTGGGGCAATGGGACTTGGTGCAGGACCTGCCCATGCTGTTTATTTCTCAGTTTATGAGATGTCCAAGGAGTTTTTCACACGTGGAAATCCAAATAGTTCAGCTGCGCATGCAGTTTCCGGAGTTTTTGCAACTGTTACAAGCGATGCTGTGATCACGCCCATGGATGTTGTGAAGCAGAGGTTGCAGTTGCAGAGCAGCCCTTATAATGGTGTTGCAGATTGTGTGAAGAGGGTTTTGGTGGACGAAGGAGTAGGAGCTTTTTACAAGTCCTATAGGACCACTGTTGTGATGAACGCCCCATTTACTGCTGTGCATTTTGCTACATATGAAGCTGCAAAGAGAGGGCTAATGGAGGTGTCGCCAGAGAGCGCCAGCGACGAGAGGTTGGTGATTCATGCCACTGCTGGGGCAGCTGCTGGGGCTTTGGCTGCTGCTGTCACTACCCCTCTTGATGTTGTGAAAACCCAATTGCAGTGCCAGGGGGTGTGTGGATGTGATAGATTTTCTAGCAGCTCGATAGGGGATGTTATTCGAAGCCTCGTGACGAAGGATGGATATCGAGGGCTTATGAGAGGTTGGGTTCCCAGGATGCTCTTTCATGCTCCTGCAGCTGCAATTTGCTGGTCTACTTATGAAGCATCAAAAAACTTTTTTCAAGAACTCAATGGCAGTGAGAGTTGCAGAACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0005215 GO:0005381 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006810 GO:0006811 GO:0006812 GO:0006826 GO:0006839 GO:0008150 GO:0008324 GO:0015075 GO:0015318 GO:0016020 GO:0016021 GO:0019866 GO:0022857 GO:0022890 GO:0030001 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0034220 GO:0034755 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046915 GO:0048250 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055085 GO:0065007 GO:0065008 GO:0097286 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:1990542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

327

Amino Acids

34.79

Weight (kDa)

7.1

Isoelectric Point (pI)

32.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002913)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07030 AT2G30160
fragaria_vesca	FvH4_3g39670 FvH4_6g10760
malus_domestica	MD03G1055400.v1.1 MD04G1164600.v1.1 MD11G1056500.v1.1 MD12G1178600.v1.1
prunus_persica	Prupe.6G049200_v2.0.a1 Prupe.6G283800_v2.0.a1
pyrus_communis	pycom03g04410 pycom04g14690 pycom11g04760 pycom12g16860
rosa_chinensis	RchiOBHm_Chr3g0461801 RchiOBHm_Chr5g0071521
rosa_laevigata	RLG00000024897 RLG00000036221
rosa_multiflora	Rmu_co8336553.1_g000001 Rmu_sc0004308.1_g000012 Rmu_sc0005745.1_g000006 Rmu_sc0007777.1_g000002 Rmu_sc0022017.1_g000001 Rmu_sc0022018.1_g000001
rosa_roxburghii	Rroxscaffold_1G00009630 Rroxscaffold_6G00417910
rosa_rugosa	Rorug03G0053800 Rorug05G0412800
rosa_samantha	Rh3AG111800 Rh3BG115100 Rh3CG117300 Rh3DG116800 Rh5AG469000 Rh5BG488100 Rh5CG512200 Rh5DG498900
rosa_wichuraiana	Rw3G009480 Rw5G043570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	495
Acc16I	TGCGCA	1 cut(s)	396
Acc36I	ACCTGC	3 cut(s)	181, 263, 325
AccI	GTMKAC	2 cut(s)	168, 917
AccIII	TCCGGA	1 cut(s)	407
AclWI	GGATC	1 cut(s)	253
AcoI	YGGCCR	1 cut(s)	3
AcvI	CACGTG	1 cut(s)	371
AfiI	CCNNNNNNNGG	2 cut(s)	497, 696
AflIII	ACRYGT	1 cut(s)	368
AgsI	TTSAA	3 cut(s)	256, 263, 947
AjnI	CCWGG	3 cut(s)	182, 768, 875
AjuI	GAANNNNNNNTTGG	4 cut(s)	347, 379, 509, 541
AleI	CACNNNNGTG	1 cut(s)	575
AluBI	AGCT	7 cut(s)	134, 392, 548, 623, 704, 804, 902
AluI	AGCT	7 cut(s)	134, 392, 548, 623, 704, 804, 902
Alw21I	GWGCWC	1 cut(s)	150
Alw26I	GTCTC	1 cut(s)	281
AlwI	GGATC	1 cut(s)	253
AlwNI	CAGNNNCTG	3 cut(s)	317, 707, 978
Aor13HI	TCCGGA	1 cut(s)	407
AoxI	GGCC	4 cut(s)	3, 94, 136, 265
AspLEI	GCGC	2 cut(s)	397, 662
AspS9I	GGNCC	2 cut(s)	314, 567
AsuHPI	GGTGA	2 cut(s)	72, 691
AsuII	TTCGAA	1 cut(s)	823
AvaII	GGWCC	2 cut(s)	314, 567
BalI	TGGCCA	1 cut(s)	5
BauI	CACGAG	1 cut(s)	830
BbrPI	CACGTG	1 cut(s)	371
Bbv12I	GWGCWC	1 cut(s)	150
BccI	CCATC	1 cut(s)	836
BceAI	ACGGC	1 cut(s)	109
BciT130I	CCWGG	3 cut(s)	184, 770, 877
BclI	TGATCA	1 cut(s)	441
BcoDI	GTCTC	1 cut(s)	281
BfaI	CTAG	2 cut(s)	140, 798
BfmI	CTRYAG	2 cut(s)	562, 897
BfoI	RGCGCY	1 cut(s)	663
BfuAI	ACCTGC	3 cut(s)	181, 263, 325
Bme1390I	CCNGG	3 cut(s)	184, 770, 877
Bme18I	GGWCC	2 cut(s)	314, 567
BmgT120I	GGNCC	2 cut(s)	314, 567
BmiI	GGNNCC	2 cut(s)	127, 873
BmrFI	CCNGG	3 cut(s)	184, 770, 877
BmrI	ACTGGG	1 cut(s)	158
BmsI	GCATC	4 cut(s)	177, 424, 870, 938
BmuI	ACTGGG	1 cut(s)	158
Bpu14I	TTCGAA	1 cut(s)	823
BpuEI	CTTGAG	1 cut(s)	119
Bsa29I	ATCGAT	1 cut(s)	248
BsaAI	YACGTR	1 cut(s)	371
BsaBI	GATNNNNATC	1 cut(s)	846
BsaI	GGTCTC	1 cut(s)	281
BsaJI	CCNNGG	6 cut(s)	241, 283, 354, 450, 769, 875
BsaWI	WCCGGW	1 cut(s)	407
Bsc4I	CCNNNNNNNGG	2 cut(s)	497, 696
Bse1I	ACTGG	1 cut(s)	164
Bse3DI	GCAATG	1 cut(s)	303
Bse8I	GATNNNNATC	1 cut(s)	846
BseAI	TCCGGA	1 cut(s)	407
BseBI	CCWGG	3 cut(s)	184, 770, 877
BseCI	ATCGAT	1 cut(s)	248
BseDI	CCNNGG	6 cut(s)	241, 283, 354, 450, 769, 875
BseGI	GGATG	6 cut(s)	192, 460, 788, 820, 847, 885
BseJI	GATNNNNATC	1 cut(s)	846
BseLI	CCNNNNNNNGG	2 cut(s)	497, 696
BseMI	GCAATG	1 cut(s)	303
BseMII	CTCAG	1 cut(s)	351
BseNI	ACTGG	1 cut(s)	164
BseYI	CCCAGC	2 cut(s)	695, 707
BsgI	GTGCAG	1 cut(s)	330
BshFI	GGCC	4 cut(s)	5, 96, 138, 267
BshVI	ATCGAT	1 cut(s)	248
BsiHKAI	GWGCWC	1 cut(s)	150
BsiSI	CCGG	1 cut(s)	408
BslFI	GGGAC	1 cut(s)	315
BslI	CCNNNNNNNGG	2 cut(s)	497, 696
BsmAI	GTCTC	1 cut(s)	281
BsmFI	GGGAC	1 cut(s)	315
BsmI	GAATGC	1 cut(s)	23
BsnI	GGCC	4 cut(s)	5, 96, 138, 267
Bso31I	GGTCTC	1 cut(s)	281
Bsp119I	TTCGAA	1 cut(s)	823
Bsp1286I	GDGCHC	1 cut(s)	150
Bsp13I	TCCGGA	1 cut(s)	407
Bsp143I	GATC	2 cut(s)	245, 441
Bsp19I	CCATGG	1 cut(s)	450
BspANI	GGCC	4 cut(s)	5, 96, 138, 267
BspCNI	CTCAG	1 cut(s)	350
BspDI	ATCGAT	1 cut(s)	248
BspEI	TCCGGA	1 cut(s)	407
BspHI	TCATGA	1 cut(s)	114
BspLI	GGNNCC	2 cut(s)	127, 873
BspMAI	CTGCAG	1 cut(s)	901
BspMI	ACCTGC	3 cut(s)	181, 263, 325
BspPI	GGATC	1 cut(s)	253
BspT104I	TTCGAA	1 cut(s)	823
BspTNI	GGTCTC	1 cut(s)	281
BsrDI	GCAATG	1 cut(s)	303
BsrI	ACTGG	1 cut(s)	164
BssECI	CCNNGG	6 cut(s)	241, 283, 354, 450, 769, 875
BssMI	GATC	2 cut(s)	245, 441
BssSI	CACGAG	1 cut(s)	830
BssT1I	CCWWGG	2 cut(s)	354, 450
Bst2BI	CACGAG	1 cut(s)	830
Bst2UI	CCWGG	3 cut(s)	184, 770, 877
Bst4CI	ACNGT	4 cut(s)	34, 284, 424, 574
Bst6I	CTCTTC	1 cut(s)	512
BstAPI	GCANNNNNTGC	2 cut(s)	317, 472
BstBAI	YACGTR	1 cut(s)	371
BstBI	TTCGAA	1 cut(s)	823
BstC8I	GCNNGC	4 cut(s)	124, 136, 399, 664
BstDEI	CTNAG	1 cut(s)	337
BstDSI	CCRYGG	2 cut(s)	283, 450
BstF5I	GGATG	6 cut(s)	192, 460, 788, 820, 847, 885
BstH2I	RGCGCY	1 cut(s)	663
BstHHI	GCGC	2 cut(s)	397, 662
BstKTI	GATC	2 cut(s)	248, 444
BstMAI	GTCTC	1 cut(s)	281
BstMBI	GATC	2 cut(s)	245, 441
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 20, 317, 398, 472, 701, 710, 719, 899
BstNI	CCWGG	3 cut(s)	184, 770, 877
BstNSI	RCATGY	1 cut(s)	401
BstSCI	CCNGG	3 cut(s)	182, 768, 875
BstSFI	CTRYAG	2 cut(s)	562, 897
Bsu15I	ATCGAT	1 cut(s)	248
BsuRI	GGCC	4 cut(s)	5, 96, 138, 267
BsuTUI	ATCGAT	1 cut(s)	248
BtgI	CCRYGG	2 cut(s)	283, 450
BtgZI	GCGATG	1 cut(s)	447
BtsCI	GGATG	6 cut(s)	192, 460, 788, 820, 847, 885
BtsI	GCAGTG	3 cut(s)	690, 770, 967
BtsIMutI	CAGTG	5 cut(s)	6, 570, 690, 770, 967
BveI	ACCTGC	3 cut(s)	181, 263, 325
Cac8I	GCNNGC	4 cut(s)	124, 136, 399, 664
CaiI	CAGNNNCTG	3 cut(s)	317, 707, 978
CciI	TCATGA	1 cut(s)	114
CfoI	GCGC	2 cut(s)	397, 662
Cfr13I	GGNCC	2 cut(s)	314, 567
ClaI	ATCGAT	1 cut(s)	248
CviAII	CATG	7 cut(s)	115, 151, 323, 398, 451, 686, 890
DdeI	CTNAG	1 cut(s)	337
DpnI	GATC	2 cut(s)	247, 443
DpnII	GATC	2 cut(s)	245, 441
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	512
EarI	CTCTTC	1 cut(s)	512
Eco130I	CCWWGG	2 cut(s)	354, 450
Eco147I	AGGCCT	1 cut(s)	267
Eco31I	GGTCTC	1 cut(s)	281
Eco32I	GATATC	1 cut(s)	848
Eco47I	GGWCC	2 cut(s)	314, 567
Eco72I	CACGTG	1 cut(s)	371
EcoO109I	RGGNCCY	1 cut(s)	314
EcoRII	CCWGG	3 cut(s)	182, 768, 875
EcoRV	GATATC	1 cut(s)	848
EcoT14I	CCWWGG	2 cut(s)	354, 450
ErhI	CCWWGG	2 cut(s)	354, 450
FaeI	CATG	7 cut(s)	118, 154, 326, 401, 454, 689, 893
FaqI	GGGAC	1 cut(s)	315
FatI	CATG	7 cut(s)	114, 150, 322, 397, 450, 685, 889
FauNDI	CATATG	1 cut(s)	616
FbaI	TGATCA	1 cut(s)	441
FblI	GTMKAC	2 cut(s)	168, 917
FokI	GGATG	6 cut(s)	199, 467, 795, 827, 854, 892
FspBI	CTAG	2 cut(s)	140, 798
FspI	TGCGCA	1 cut(s)	396
GlaI	GCGC	2 cut(s)	396, 661
GsaI	CCCAGC	2 cut(s)	699, 711
HaeII	RGCGCY	1 cut(s)	663
HaeIII	GGCC	4 cut(s)	5, 96, 138, 267
HapII	CCGG	1 cut(s)	408
HhaI	GCGC	2 cut(s)	397, 662
Hin1II	CATG	7 cut(s)	118, 154, 326, 401, 454, 689, 893
Hin6I	GCGC	2 cut(s)	395, 660
HinP1I	GCGC	2 cut(s)	395, 660
HinfI	GANTC	1 cut(s)	682
HpaII	CCGG	1 cut(s)	408
HphI	GGTGA	2 cut(s)	72, 691
Hpy166II	GTNNAC	3 cut(s)	169, 532, 918
Hpy188I	TCNGA	2 cut(s)	29, 245
Hpy188III	TCNNGA	5 cut(s)	115, 408, 740, 832, 947
Hpy8I	GTNNAC	3 cut(s)	169, 532, 918
Hpy99I	CGWCG	2 cut(s)	95, 671
HpyAV	CCTTC	3 cut(s)	257, 530, 832
HpyCH4III	ACNGT	4 cut(s)	34, 284, 424, 574
HpyCH4IV	ACGT	1 cut(s)	370
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 20, 317, 398, 472, 701, 710, 719, 899
HpyF3I	CTNAG	1 cut(s)	337
HpySE526I	ACGT	1 cut(s)	370
Hsp92II	CATG	7 cut(s)	118, 154, 326, 401, 454, 689, 893
HspAI	GCGC	2 cut(s)	395, 660
Kpn2I	TCCGGA	1 cut(s)	407
Ksp22I	TGATCA	1 cut(s)	441
Kzo9I	GATC	2 cut(s)	245, 441
LmnI	GCTCC	3 cut(s)	131, 545, 898
LweI	GCATC	4 cut(s)	177, 424, 870, 938
MaeI	CTAG	2 cut(s)	140, 798
MaeII	ACGT	1 cut(s)	370
MaeIII	GTNAC	3 cut(s)	424, 727, 832
MalI	GATC	2 cut(s)	247, 443
MboI	GATC	2 cut(s)	245, 441
MboII	GAAGA	1 cut(s)	529
MfeI	CAATTG	1 cut(s)	758
MhlI	GDGCHC	1 cut(s)	150
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	2 cut(s)	758, 906
MluNI	TGGCCA	1 cut(s)	5
Mox20I	TGGCCA	1 cut(s)	5
MroI	TCCGGA	1 cut(s)	407
MscI	TGGCCA	1 cut(s)	5
MslI	CAYNNNNRTG	3 cut(s)	155, 449, 575
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	3 cut(s)	392, 704, 902
MspI	CCGG	1 cut(s)	408
MspR9I	CCNGG	3 cut(s)	184, 770, 877
MunI	CAATTG	1 cut(s)	758
Mva1269I	GAATGC	1 cut(s)	23
MvaI	CCWGG	3 cut(s)	184, 770, 877
MwoI	GCNNNNNNNGC	9 cut(s)	11, 20, 317, 398, 472, 701, 710, 719, 899
NcoI	CCATGG	1 cut(s)	450
NdeI	CATATG	1 cut(s)	616
NdeII	GATC	2 cut(s)	245, 441
NlaIII	CATG	7 cut(s)	118, 154, 326, 401, 454, 689, 893
NlaIV	GGNNCC	2 cut(s)	127, 873
NmuCI	GTSAC	2 cut(s)	727, 832
NsbI	TGCGCA	1 cut(s)	396
NspI	RCATGY	1 cut(s)	401
NspV	TTCGAA	1 cut(s)	823
OliI	CACNNNNGTG	1 cut(s)	575
PaeI	GCATGC	1 cut(s)	401
PagI	TCATGA	1 cut(s)	114
PceI	AGGCCT	1 cut(s)	267
PctI	GAATGC	1 cut(s)	23
PfeI	GAWTC	1 cut(s)	682
PmaCI	CACGTG	1 cut(s)	371
PmlI	CACGTG	1 cut(s)	371
Ppu21I	YACGTR	1 cut(s)	371
PpuMI	RGGWCCY	1 cut(s)	314
PsiI	TTATAA	1 cut(s)	495
Psp5II	RGGWCCY	1 cut(s)	314
Psp6I	CCWGG	3 cut(s)	182, 768, 875
PspCI	CACGTG	1 cut(s)	371
PspFI	CCCAGC	2 cut(s)	695, 707
PspGI	CCWGG	3 cut(s)	182, 768, 875
PspN4I	GGNNCC	2 cut(s)	127, 873
PspPI	GGNCC	2 cut(s)	314, 567
PspPPI	RGGWCCY	1 cut(s)	314
PstI	CTGCAG	1 cut(s)	901
PstNI	CAGNNNCTG	3 cut(s)	317, 707, 978
PvuII	CAGCTG	3 cut(s)	392, 704, 902
RseI	CAYNNNNRTG	3 cut(s)	155, 449, 575
Sau3AI	GATC	2 cut(s)	245, 441
Sau96I	GGNCC	2 cut(s)	314, 567
ScrFI	CCNGG	3 cut(s)	184, 770, 877
SduI	GDGCHC	1 cut(s)	150
SfaNI	GCATC	4 cut(s)	177, 424, 870, 938
SfcI	CTRYAG	2 cut(s)	562, 897
SfuI	TTCGAA	1 cut(s)	823
SinI	GGWCC	2 cut(s)	314, 567
SmiMI	CAYNNNNRTG	3 cut(s)	155, 449, 575
SmlI	CTYRAG	1 cut(s)	98
SmoI	CTYRAG	1 cut(s)	98
SphI	GCATGC	1 cut(s)	401
Sse9I	AATT	2 cut(s)	758, 906
SseBI	AGGCCT	1 cut(s)	267
SspMI	CTAG	2 cut(s)	140, 798
StuI	AGGCCT	1 cut(s)	267
StyD4I	CCNGG	3 cut(s)	182, 768, 875
StyI	CCWWGG	2 cut(s)	354, 450
TaaI	ACNGT	4 cut(s)	34, 284, 424, 574
TaiI	ACGT	1 cut(s)	373
TaqI	TCGA	5 cut(s)	232, 248, 806, 823, 850
TasI	AATT	2 cut(s)	758, 906
TfiI	GAWTC	1 cut(s)	682
TscAI	CASTG	5 cut(s)	13, 577, 697, 770, 967
TseFI	GTSAC	2 cut(s)	727, 832
Tsp45I	GTSAC	2 cut(s)	727, 832
TspDTI	ATGAA	6 cut(s)	103, 596, 633, 674, 878, 939
TspRI	CASTG	5 cut(s)	13, 577, 697, 770, 967
VpaK11BI	GGWCC	2 cut(s)	314, 567
XceI	RCATGY	1 cut(s)	401
XcmI	CCANNNNNNNNNTGG	1 cut(s)	776
XmiI	GTMKAC	2 cut(s)	168, 917
XspI	CTAG	2 cut(s)	140, 798

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.