Belongs to the mitochondrial carrier (TC 2.A.29) family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G07030 AT2G30160 |
| fragaria_vesca | FvH4_3g39670 FvH4_6g10760 |
| malus_domestica | MD03G1055400.v1.1 MD04G1164600.v1.1 MD11G1056500.v1.1 MD12G1178600.v1.1 |
| prunus_persica | Prupe.6G049200_v2.0.a1 Prupe.6G283800_v2.0.a1 |
| pyrus_communis | pycom03g04410 pycom04g14690 pycom11g04760 pycom12g16860 |
| rosa_chinensis | RchiOBHm_Chr3g0461801 RchiOBHm_Chr5g0071521 |
| rosa_laevigata | RLG00000024897 RLG00000036221 |
| rosa_multiflora | Rmu_co8336553.1_g000001 Rmu_sc0004308.1_g000012 Rmu_sc0005745.1_g000006 Rmu_sc0007777.1_g000002 Rmu_sc0022017.1_g000001 Rmu_sc0022018.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00009630 Rroxscaffold_6G00417910 |
| rosa_rugosa | Rorug03G0053800 Rorug05G0412800 |
| rosa_samantha | Rh3AG111800 Rh3BG115100 Rh3CG117300 Rh3DG116800 Rh5AG469000 Rh5BG488100 Rh5CG512200 Rh5DG498900 |
| rosa_wichuraiana | Rw3G009480 Rw5G043570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 326 |
| AccI | GTMKAC | 3 cut(s) | 189, 348, 360 |
| AccII | CGCG | 4 cut(s) | 303, 437, 632, 683 |
| AccIII | TCCGGA | 1 cut(s) | 425 |
| AcoI | YGGCCR | 2 cut(s) | 3, 174 |
| AcyI | GRCGYC | 3 cut(s) | 327, 453, 464 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 517 |
| AjnI | CCWGG | 1 cut(s) | 966 |
| AleI | CACNNNNGTG | 1 cut(s) | 620 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 825, 857 |
| AluBI | AGCT | 3 cut(s) | 215, 496, 728 |
| AluI | AGCT | 3 cut(s) | 215, 496, 728 |
| Alw21I | GWGCWC | 2 cut(s) | 171, 681 |
| Alw26I | GTCTC | 1 cut(s) | 427 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 490 |
| Ama87I | CYCGRG | 1 cut(s) | 218 |
| Aor13HI | TCCGGA | 1 cut(s) | 425 |
| ApaI | GGGCCC | 1 cut(s) | 287 |
| ApeKI | GCWGC | 8 cut(s) | 58, 98, 490, 493, 722, 725, 920, 923 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 959 |
| AspLEI | GCGC | 2 cut(s) | 329, 610 |
| AspS9I | GGNCC | 9 cut(s) | 74, 82, 222, 256, 283, 284, 319, 332, 337 |
| AsuC2I | CCSGG | 2 cut(s) | 292, 331 |
| AsuHPI | GGTGA | 3 cut(s) | 490, 658, 742 |
| AsuII | TTCGAA | 2 cut(s) | 844, 953 |
| AvaI | CYCGRG | 1 cut(s) | 218 |
| AvaII | GGWCC | 2 cut(s) | 82, 222 |
| BaeGI | GKGCMC | 1 cut(s) | 287 |
| BalI | TGGCCA | 2 cut(s) | 5, 176 |
| BanI | GGYRCC | 1 cut(s) | 326 |
| BanII | GRGCYC | 3 cut(s) | 287, 297, 895 |
| BbsI | GAAGAC | 1 cut(s) | 962 |
| Bbv12I | GWGCWC | 2 cut(s) | 171, 681 |
| BbvI | GCAGC | 8 cut(s) | 70, 85, 477, 505, 709, 737, 907, 910 |
| BccI | CCATC | 5 cut(s) | 463, 551, 655, 857, 882 |
| BceAI | ACGGC | 6 cut(s) | 88, 130, 329, 404, 440, 595 |
| BciT130I | CCWGG | 1 cut(s) | 968 |
| BcnI | CCSGG | 2 cut(s) | 292, 331 |
| BcoDI | GTCTC | 1 cut(s) | 427 |
| BfaI | CTAG | 1 cut(s) | 579 |
| BfmI | CTRYAG | 2 cut(s) | 491, 723 |
| BfoI | RGCGCY | 1 cut(s) | 330 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 335 |
| BglII | AGATCT | 1 cut(s) | 666 |
| Bme1390I | CCNGG | 3 cut(s) | 292, 331, 968 |
| Bme18I | GGWCC | 2 cut(s) | 82, 222 |
| BmeT110I | CYCGRG | 1 cut(s) | 218 |
| BmgT120I | GGNCC | 9 cut(s) | 74, 82, 222, 256, 283, 284, 319, 332, 337 |
| BmiI | GGNNCC | 6 cut(s) | 223, 265, 285, 286, 328, 894 |
| BmrFI | CCNGG | 3 cut(s) | 292, 331, 968 |
| BpiI | GAAGAC | 1 cut(s) | 962 |
| BpmI | CTGGAG | 1 cut(s) | 750 |
| Bpu14I | TTCGAA | 2 cut(s) | 844, 953 |
| BpuMI | CCSGG | 2 cut(s) | 292, 331 |
| BsaBI | GATNNNNATC | 1 cut(s) | 665 |
| BsaHI | GRCGYC | 3 cut(s) | 327, 453, 464 |
| BsaJI | CCNNGG | 4 cut(s) | 259, 301, 315, 322 |
| BsaWI | WCCGGW | 2 cut(s) | 79, 425 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 353, 383, 407, 437, 825, 855 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 517 |
| Bse118I | RCCGGY | 3 cut(s) | 143, 155, 334 |
| Bse3DI | GCAATG | 1 cut(s) | 306 |
| Bse8I | GATNNNNATC | 1 cut(s) | 665 |
| BseAI | TCCGGA | 1 cut(s) | 425 |
| BseBI | CCWGG | 1 cut(s) | 968 |
| BseDI | CCNNGG | 4 cut(s) | 259, 301, 315, 322 |
| BseGI | GGATG | 3 cut(s) | 691, 868, 893 |
| BseJI | GATNNNNATC | 1 cut(s) | 665 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 517 |
| BseMI | GCAATG | 1 cut(s) | 306 |
| BseMII | CTCAG | 2 cut(s) | 756, 845 |
| BseRI | GAGGAG | 2 cut(s) | 94, 704 |
| BseSI | GKGCMC | 1 cut(s) | 287 |
| BseXI | GCAGC | 8 cut(s) | 70, 85, 477, 505, 709, 737, 907, 910 |
| BseYI | CCCAGC | 1 cut(s) | 496 |
| Bsh1236I | CGCG | 4 cut(s) | 303, 437, 632, 683 |
| Bsh1285I | CGRYCG | 1 cut(s) | 243 |
| BshNI | GGYRCC | 1 cut(s) | 326 |
| BsiEI | CGRYCG | 1 cut(s) | 243 |
| BsiHKAI | GWGCWC | 2 cut(s) | 171, 681 |
| BsiHKCI | CYCGRG | 1 cut(s) | 218 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 517 |
| BsmAI | GTCTC | 1 cut(s) | 427 |
| BsmBI | CGTCTC | 1 cut(s) | 427 |
| BsmI | GAATGC | 2 cut(s) | 610, 906 |
| BsoBI | CYCGRG | 1 cut(s) | 218 |
| Bsp119I | TTCGAA | 2 cut(s) | 844, 953 |
| Bsp120I | GGGCCC | 1 cut(s) | 283 |
| Bsp1286I | GDGCHC | 5 cut(s) | 171, 287, 297, 681, 895 |
| Bsp13I | TCCGGA | 1 cut(s) | 425 |
| Bsp143I | GATC | 2 cut(s) | 138, 666 |
| Bsp19I | CCATGG | 1 cut(s) | 315 |
| Bsp68I | TCGCGA | 2 cut(s) | 437, 632 |
| BspCNI | CTCAG | 2 cut(s) | 755, 846 |
| BspEI | TCCGGA | 1 cut(s) | 425 |
| BspFNI | CGCG | 4 cut(s) | 303, 437, 632, 683 |
| BspHI | TCATGA | 1 cut(s) | 135 |
| BspLI | GGNNCC | 6 cut(s) | 223, 265, 285, 286, 328, 894 |
| BspMAI | CTGCAG | 2 cut(s) | 495, 727 |
| BspQI | GCTCTTC | 1 cut(s) | 269 |
| BspT104I | TTCGAA | 2 cut(s) | 844, 953 |
| BspT107I | GGYRCC | 1 cut(s) | 326 |
| BsrDI | GCAATG | 1 cut(s) | 306 |
| BsrFI | RCCGGY | 3 cut(s) | 143, 155, 334 |
| BssAI | RCCGGY | 3 cut(s) | 143, 155, 334 |
| BssECI | CCNNGG | 4 cut(s) | 259, 301, 315, 322 |
| BssMI | GATC | 2 cut(s) | 138, 666 |
| BssNI | GRCGYC | 3 cut(s) | 327, 453, 464 |
| BssT1I | CCWWGG | 1 cut(s) | 315 |
| Bst2UI | CCWGG | 1 cut(s) | 968 |
| Bst4CI | ACNGT | 6 cut(s) | 196, 442, 595, 786, 995, 1003 |
| Bst6I | CTCTTC | 1 cut(s) | 269 |
| BstACI | GRCGYC | 3 cut(s) | 327, 453, 464 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 490 |
| BstBI | TTCGAA | 2 cut(s) | 844, 953 |
| BstC8I | GCNNGC | 7 cut(s) | 145, 157, 213, 255, 336, 448, 681 |
| BstDEI | CTNAG | 2 cut(s) | 742, 854 |
| BstDSI | CCRYGG | 2 cut(s) | 301, 315 |
| BstEII | GGTNACC | 1 cut(s) | 748 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 515 |
| BstF5I | GGATG | 3 cut(s) | 691, 868, 893 |
| BstFNI | CGCG | 4 cut(s) | 303, 437, 632, 683 |
| BstH2I | RGCGCY | 1 cut(s) | 330 |
| BstHHI | GCGC | 2 cut(s) | 329, 610 |
| BstKTI | GATC | 2 cut(s) | 141, 669 |
| BstMAI | GTCTC | 1 cut(s) | 427 |
| BstMBI | GATC | 2 cut(s) | 138, 666 |
| BstMCI | CGRYCG | 1 cut(s) | 243 |
| BstNI | CCWGG | 1 cut(s) | 968 |
| BstPI | GGTNACC | 1 cut(s) | 748 |
| BstSCI | CCNGG | 3 cut(s) | 290, 329, 966 |
| BstSFI | CTRYAG | 2 cut(s) | 491, 723 |
| BstSLI | GKGCMC | 1 cut(s) | 287 |
| BstUI | CGCG | 4 cut(s) | 303, 437, 632, 683 |
| BstV1I | GCAGC | 8 cut(s) | 70, 85, 477, 505, 709, 737, 907, 910 |
| BstV2I | GAAGAC | 1 cut(s) | 962 |
| BstX2I | RGATCY | 1 cut(s) | 666 |
| BstYI | RGATCY | 1 cut(s) | 666 |
| BtgI | CCRYGG | 2 cut(s) | 301, 315 |
| BtsCI | GGATG | 3 cut(s) | 691, 868, 893 |
| BtsIMutI | CAGTG | 4 cut(s) | 750, 791, 999, 1000 |
| BtuMI | TCGCGA | 2 cut(s) | 437, 632 |
| Cac8I | GCNNGC | 7 cut(s) | 145, 157, 213, 255, 336, 448, 681 |
| CaiI | CAGNNNCTG | 1 cut(s) | 490 |
| CciI | TCATGA | 1 cut(s) | 135 |
| CfoI | GCGC | 2 cut(s) | 329, 610 |
| Cfr10I | RCCGGY | 3 cut(s) | 143, 155, 334 |
| Cfr13I | GGNCC | 9 cut(s) | 74, 82, 222, 256, 283, 284, 319, 332, 337 |
| Cfr42I | CCGCGG | 1 cut(s) | 304 |
| CseI | GACGC | 3 cut(s) | 20, 461, 472 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 742, 777, 964, 999 |
| CviAII | CATG | 7 cut(s) | 136, 160, 172, 178, 316, 707, 911 |
| DdeI | CTNAG | 2 cut(s) | 742, 854 |
| DinI | GGCGCC | 1 cut(s) | 328 |
| DpnI | GATC | 2 cut(s) | 140, 668 |
| DpnII | GATC | 2 cut(s) | 138, 666 |
| DraI | TTTAAA | 1 cut(s) | 817 |
| EaeI | YGGCCR | 2 cut(s) | 3, 174 |
| Eam1104I | CTCTTC | 1 cut(s) | 269 |
| EarI | CTCTTC | 1 cut(s) | 269 |
| EciI | GGCGGA | 2 cut(s) | 32, 397 |
| Eco130I | CCWWGG | 1 cut(s) | 315 |
| Eco24I | GRGCYC | 3 cut(s) | 287, 297, 895 |
| Eco47I | GGWCC | 2 cut(s) | 82, 222 |
| Eco88I | CYCGRG | 1 cut(s) | 218 |
| Eco91I | GGTNACC | 1 cut(s) | 748 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 515 |
| EcoO109I | RGGNCCY | 4 cut(s) | 222, 256, 283, 284 |
| EcoO65I | GGTNACC | 1 cut(s) | 748 |
| EcoRII | CCWGG | 1 cut(s) | 966 |
| EcoT14I | CCWWGG | 1 cut(s) | 315 |
| EcoT38I | GRGCYC | 3 cut(s) | 287, 297, 895 |
| EgeI | GGCGCC | 1 cut(s) | 328 |
| EheI | GGCGCC | 1 cut(s) | 328 |
| ErhI | CCWWGG | 1 cut(s) | 315 |
| Esp3I | CGTCTC | 1 cut(s) | 427 |
| FaeI | CATG | 7 cut(s) | 139, 163, 175, 181, 319, 710, 914 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 947, 979 |
| FatI | CATG | 7 cut(s) | 135, 159, 171, 177, 315, 706, 910 |
| FauI | CCCGC | 2 cut(s) | 295, 383 |
| FauNDI | CATATG | 2 cut(s) | 207, 943 |
| FblI | GTMKAC | 3 cut(s) | 189, 348, 360 |
| FokI | GGATG | 3 cut(s) | 698, 875, 900 |
| FriOI | GRGCYC | 3 cut(s) | 287, 297, 895 |
| FseI | GGCCGGCC | 1 cut(s) | 338 |
| FspBI | CTAG | 1 cut(s) | 579 |
| GlaI | GCGC | 2 cut(s) | 328, 609 |
| GsaI | CCCAGC | 1 cut(s) | 500 |
| GsuI | CTGGAG | 1 cut(s) | 750 |
| HaeII | RGCGCY | 1 cut(s) | 330 |
| HgaI | GACGC | 3 cut(s) | 20, 461, 472 |
| HhaI | GCGC | 2 cut(s) | 329, 610 |
| Hin1I | GRCGYC | 3 cut(s) | 327, 453, 464 |
| Hin1II | CATG | 7 cut(s) | 139, 163, 175, 181, 319, 710, 914 |
| Hin6I | GCGC | 2 cut(s) | 327, 608 |
| HinP1I | GCGC | 2 cut(s) | 327, 608 |
| HincII | GTYRAC | 2 cut(s) | 190, 939 |
| HindII | GTYRAC | 2 cut(s) | 190, 939 |
| HinfI | GANTC | 3 cut(s) | 49, 246, 394 |
| HphI | GGTGA | 3 cut(s) | 490, 658, 742 |
| Hpy166II | GTNNAC | 5 cut(s) | 190, 349, 361, 615, 939 |
| Hpy188I | TCNGA | 2 cut(s) | 245, 897 |
| Hpy188III | TCNNGA | 4 cut(s) | 136, 426, 436, 631 |
| Hpy8I | GTNNAC | 5 cut(s) | 190, 349, 361, 615, 939 |
| Hpy99I | CGWCG | 5 cut(s) | 116, 191, 442, 455, 637 |
| HpyAV | CCTTC | 3 cut(s) | 535, 646, 970 |
| HpyCH4III | ACNGT | 6 cut(s) | 196, 442, 595, 786, 995, 1003 |
| HpyCH4IV | ACGT | 1 cut(s) | 635 |
| HpyCH4V | TGCA | 4 cut(s) | 211, 493, 625, 725 |
| HpyF3I | CTNAG | 2 cut(s) | 742, 854 |
| HpySE526I | ACGT | 1 cut(s) | 635 |
| Hsp92I | GRCGYC | 3 cut(s) | 327, 453, 464 |
| Hsp92II | CATG | 7 cut(s) | 139, 163, 175, 181, 319, 710, 914 |
| HspAI | GCGC | 2 cut(s) | 327, 608 |
| KasI | GGCGCC | 1 cut(s) | 326 |
| Kpn2I | TCCGGA | 1 cut(s) | 425 |
| KroI | GCCGGC | 3 cut(s) | 143, 155, 334 |
| KroNI | GCCGGC | 3 cut(s) | 145, 157, 336 |
| KspI | CCGCGG | 1 cut(s) | 304 |
| Kzo9I | GATC | 2 cut(s) | 138, 666 |
| LguI | GCTCTTC | 1 cut(s) | 269 |
| LmnI | GCTCC | 3 cut(s) | 269, 676, 898 |
| Lsp1109I | GCAGC | 8 cut(s) | 70, 85, 477, 505, 709, 737, 907, 910 |
| MaeI | CTAG | 1 cut(s) | 579 |
| MaeII | ACGT | 1 cut(s) | 635 |
| MaeIII | GTNAC | 4 cut(s) | 748, 806, 989, 1003 |
| MalI | GATC | 2 cut(s) | 140, 668 |
| MboI | GATC | 2 cut(s) | 138, 666 |
| MboII | GAAGA | 6 cut(s) | 286, 550, 566, 661, 955, 967 |
| MflI | RGATCY | 1 cut(s) | 666 |
| MhlI | GDGCHC | 5 cut(s) | 171, 287, 297, 681, 895 |
| MlsI | TGGCCA | 2 cut(s) | 5, 176 |
| MluCI | AATT | 1 cut(s) | 779 |
| MluNI | TGGCCA | 2 cut(s) | 5, 176 |
| Mly113I | GGCGCC | 1 cut(s) | 327 |
| MmeI | TCCRAC | 1 cut(s) | 223 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 176 |
| MroI | TCCGGA | 1 cut(s) | 425 |
| MroNI | GCCGGC | 3 cut(s) | 143, 155, 334 |
| MroXI | GAANNNNTTC | 1 cut(s) | 959 |
| MscI | TGGCCA | 2 cut(s) | 5, 176 |
| MseI | TTAA | 2 cut(s) | 234, 816 |
| MslI | CAYNNNNRTG | 3 cut(s) | 176, 620, 684 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 176 |
| MspA1I | CMGCKG | 5 cut(s) | 98, 303, 496, 620, 728 |
| MspR9I | CCNGG | 3 cut(s) | 292, 331, 968 |
| Mva1269I | GAATGC | 2 cut(s) | 610, 906 |
| MvaI | CCWGG | 1 cut(s) | 968 |
| MvnI | CGCG | 4 cut(s) | 303, 437, 632, 683 |
| NaeI | GCCGGC | 3 cut(s) | 145, 157, 336 |
| NarI | GGCGCC | 1 cut(s) | 327 |
| NciI | CCSGG | 2 cut(s) | 292, 331 |
| NcoI | CCATGG | 1 cut(s) | 315 |
| NdeI | CATATG | 2 cut(s) | 207, 943 |
| NdeII | GATC | 2 cut(s) | 138, 666 |
| NgoMIV | GCCGGC | 3 cut(s) | 143, 155, 334 |
| NlaIII | CATG | 7 cut(s) | 139, 163, 175, 181, 319, 710, 914 |
| NlaIV | GGNNCC | 6 cut(s) | 223, 265, 285, 286, 328, 894 |
| NmeAIII | GCCGAG | 2 cut(s) | 240, 303 |
| NmuCI | GTSAC | 2 cut(s) | 748, 806 |
| NruI | TCGCGA | 2 cut(s) | 437, 632 |
| NspV | TTCGAA | 2 cut(s) | 844, 953 |
| OliI | CACNNNNGTG | 1 cut(s) | 620 |
| PagI | TCATGA | 1 cut(s) | 135 |
| PciSI | GCTCTTC | 1 cut(s) | 269 |
| PctI | GAATGC | 2 cut(s) | 610, 906 |
| PdiI | GCCGGC | 3 cut(s) | 145, 157, 336 |
| PdmI | GAANNNNTTC | 1 cut(s) | 959 |
| PfeI | GAWTC | 3 cut(s) | 49, 246, 394 |
| PflFI | GACNNNGTC | 1 cut(s) | 194 |
| PfoI | TCCNGGA | 1 cut(s) | 966 |
| PluTI | GGCGCC | 1 cut(s) | 330 |
| PpuMI | RGGWCCY | 1 cut(s) | 222 |
| Psp5II | RGGWCCY | 1 cut(s) | 222 |
| Psp6I | CCWGG | 1 cut(s) | 966 |
| PspEI | GGTNACC | 1 cut(s) | 748 |
| PspFI | CCCAGC | 1 cut(s) | 496 |
| PspGI | CCWGG | 1 cut(s) | 966 |
| PspN4I | GGNNCC | 6 cut(s) | 223, 265, 285, 286, 328, 894 |
| PspOMI | GGGCCC | 1 cut(s) | 283 |
| PspPI | GGNCC | 9 cut(s) | 74, 82, 222, 256, 283, 284, 319, 332, 337 |
| PspPPI | RGGWCCY | 1 cut(s) | 222 |
| PstI | CTGCAG | 2 cut(s) | 495, 727 |
| PstNI | CAGNNNCTG | 1 cut(s) | 490 |
| PsuI | RGATCY | 1 cut(s) | 666 |
| PsyI | GACNNNGTC | 1 cut(s) | 194 |
| PvuII | CAGCTG | 2 cut(s) | 496, 728 |
| RigI | GGCCGGCC | 1 cut(s) | 338 |
| RruI | TCGCGA | 2 cut(s) | 437, 632 |
| RseI | CAYNNNNRTG | 3 cut(s) | 176, 620, 684 |
| SacII | CCGCGG | 1 cut(s) | 304 |
| SalI | GTCGAC | 1 cut(s) | 188 |
| SapI | GCTCTTC | 1 cut(s) | 269 |
| SaqAI | TTAA | 2 cut(s) | 234, 816 |
| Sau3AI | GATC | 2 cut(s) | 138, 666 |
| Sau96I | GGNCC | 9 cut(s) | 74, 82, 222, 256, 283, 284, 319, 332, 337 |
| ScrFI | CCNGG | 3 cut(s) | 292, 331, 968 |
| SduI | GDGCHC | 5 cut(s) | 171, 287, 297, 681, 895 |
| SetI | ASST | 8 cut(s) | 87, 217, 498, 546, 638, 730, 962, 1010 |
| SfcI | CTRYAG | 2 cut(s) | 491, 723 |
| SfoI | GGCGCC | 1 cut(s) | 328 |
| Sfr303I | CCGCGG | 1 cut(s) | 304 |
| SfuI | TTCGAA | 2 cut(s) | 844, 953 |
| SgrBI | CCGCGG | 1 cut(s) | 304 |
| SinI | GGWCC | 2 cut(s) | 82, 222 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 176, 620, 684 |
| Sse9I | AATT | 1 cut(s) | 779 |
| SspDI | GGCGCC | 1 cut(s) | 326 |
| SspMI | CTAG | 1 cut(s) | 579 |
| StyD4I | CCNGG | 3 cut(s) | 290, 329, 966 |
| StyI | CCWWGG | 1 cut(s) | 315 |
| TaaI | ACNGT | 6 cut(s) | 196, 442, 595, 786, 995, 1003 |
| TaiI | ACGT | 1 cut(s) | 638 |
| TaqI | TCGA | 5 cut(s) | 165, 189, 827, 844, 953 |
| TaqII | GACCGA | 2 cut(s) | 229, 346 |
| TasI | AATT | 1 cut(s) | 779 |
| TauI | GCSGC | 7 cut(s) | 92, 95, 98, 306, 314, 413, 760 |
| TfiI | GAWTC | 3 cut(s) | 49, 246, 394 |
| Tru1I | TTAA | 2 cut(s) | 234, 816 |
| Tru9I | TTAA | 2 cut(s) | 234, 816 |
| TscAI | CASTG | 4 cut(s) | 750, 791, 1000, 1006 |
| TseFI | GTSAC | 2 cut(s) | 748, 806 |
| TseI | GCWGC | 8 cut(s) | 58, 98, 490, 493, 722, 725, 920, 923 |
| Tsp45I | GTSAC | 2 cut(s) | 748, 806 |
| TspDTI | ATGAA | 4 cut(s) | 124, 287, 617, 695 |
| TspRI | CASTG | 4 cut(s) | 750, 791, 1000, 1006 |
| Tth111I | GACNNNGTC | 1 cut(s) | 194 |
| VpaK11BI | GGWCC | 2 cut(s) | 82, 222 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 515 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 974 |
| XmiI | GTMKAC | 3 cut(s) | 189, 348, 360 |
| XmnI | GAANNNNTTC | 1 cut(s) | 959 |
| XspI | CTAG | 1 cut(s) | 579 |