Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0002913

Physical Location & Seq

Genomic Coordinates Reverse (-)

3499553 .. 3501939

Gene Structure 2387 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G049200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1002 bp

ATGGCCACCGATGCCACGCCCAAATTCAAAAACCCAGATTTTCGCCCGATTTCTCAGCCCCAAGACTACCGGCAGGACGCCACCGTTTCGGCCCACGACGGCCTCCACTTCTGGCAGTTCATGATCGCCGGCTCCATCGCCGGCATGGTCGAACACATGGCCATGTTCCCAGTGGACACCATAAAAACCCATATGCAAGCTCTCGGGTCCTGCCCGATTAAGTCGGTCGGAGTCCGGCAGGCCCTCGGATCCATTTTAAAGTCTGAGGGGCCCGCCGGGCTCTACCGTGGCATTGGAGCCATGGGGCTCGGAGCCGGCCCGGCACACGCCGTCTACTTCTCCGTCTATGAGATGAGCAAGAAGTTTTTTTCGGGCGGGAACCCGAACAACCCGGGTGCCCATGCGATTTCGGGCGTTTTTGCTACGGTGGCGAGCGACGCCGTTTTTACCCCAATGGACATGGTGAAGCAGAGGCTGCAGTTGGGGAACAATCTTCACAGTCCGTACAAGGGAGTGTGGGATTGTGTGCGGAAGGTGTTCAGGGAAGATGGGGTGAGGGCGTTTTATGCGTCGTACAGGACGACGGTGCTGATGAATGCCCCGTTTACGGCGGTGCATTTTGCGACGTATGAGGCGGTGAAGAGGGGCTTGATGGAGATTTCACCCGAGCATGCGAACGACGAGCGTTTGATTGTTCATGCTACTGCTGGTGCTGCAGCTGGTGGCTTGGCCTCTATGGTCACTACGCCGCTGGATGTGGTCAAAACTCAATTACAGTGTCAGGGTATTTGCGGTTGTGACAGATTTAAAAGTGGTTCGATTAGAGACGTTTTTCGGACAATAGTGAGAAAGGATGGATACAAAGGTCTTGTGAGGGGATGGGCTCCAAGAATGCTCTTCCATGCCCCAGCTGCTGCTATCTGCTGGTCCACATATGAAGCCTCAAAAACCTTCTTCCAAGAACTCAATGGTAGTAGTAGTAATAGTGGCACTATAACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0005215 GO:0005381 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0006826 GO:0006839 GO:0008150 GO:0008152 GO:0008324 GO:0008380 GO:0009987 GO:0010467 GO:0015075 GO:0015093 GO:0015318 GO:0015684 GO:0016020 GO:0016021 GO:0016070 GO:0019866 GO:0022857 GO:0022890 GO:0030001 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0034220 GO:0034641 GO:0034755 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046873 GO:0046915 GO:0048250 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055085 GO:0065007 GO:0065008 GO:0070838 GO:0071704 GO:0072509 GO:0072511 GO:0090304 GO:0097286 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:1901360 GO:1903874 GO:1990542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

334

Amino Acids

36.06

Weight (kDa)

9.18

Isoelectric Point (pI)

22.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002913)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07030 AT2G30160
fragaria_vesca	FvH4_3g39670 FvH4_6g10760
malus_domestica	MD03G1055400.v1.1 MD04G1164600.v1.1 MD11G1056500.v1.1 MD12G1178600.v1.1
prunus_persica	Prupe.6G049200_v2.0.a1 Prupe.6G283800_v2.0.a1
pyrus_communis	pycom03g04410 pycom04g14690 pycom11g04760 pycom12g16860
rosa_chinensis	RchiOBHm_Chr3g0461801 RchiOBHm_Chr5g0071521
rosa_laevigata	RLG00000024897 RLG00000036221
rosa_multiflora	Rmu_co8336553.1_g000001 Rmu_sc0004308.1_g000012 Rmu_sc0005745.1_g000006 Rmu_sc0007777.1_g000002 Rmu_sc0022017.1_g000001 Rmu_sc0022018.1_g000001
rosa_roxburghii	Rroxscaffold_1G00009630 Rroxscaffold_6G00417910
rosa_rugosa	Rorug03G0053800 Rorug05G0412800
rosa_samantha	Rh3AG111800 Rh3BG115100 Rh3CG117300 Rh3DG116800 Rh5AG469000 Rh5BG488100 Rh5CG512200 Rh5DG498900
rosa_wichuraiana	Rw3G009480 Rw5G043570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	395
AccI	GTMKAC	1 cut(s)	333
AciI	CCGC	7 cut(s)	273, 375, 529, 611, 635, 749, 792
AclWI	GGATC	2 cut(s)	243, 256
AcoI	YGGCCR	2 cut(s)	3, 159
AcsI	RAATTY	1 cut(s)	23
AcyI	GRCGYC	2 cut(s)	78, 438
AfaI	GTAC	2 cut(s)	506, 575
AfiI	CCNNNNNNNGG	2 cut(s)	509, 607
AgsI	TTSAA	1 cut(s)	28
AluBI	AGCT	3 cut(s)	200, 719, 911
AluI	AGCT	3 cut(s)	200, 719, 911
Alw26I	GTCTC	1 cut(s)	819
AlwI	GGATC	2 cut(s)	243, 256
AlwNI	CAGNNNCTG	2 cut(s)	475, 914
Ama87I	CYCGRG	3 cut(s)	203, 391, 665
AoxI	GGCC	8 cut(s)	3, 90, 100, 159, 240, 269, 316, 729
ApaI	GGGCCC	1 cut(s)	273
ApeKI	GCWGC	5 cut(s)	475, 713, 716, 911, 914
ApoI	RAATTY	1 cut(s)	23
Asp700I	GAANNNNTTC	1 cut(s)	536
AspS9I	GGNCC	7 cut(s)	91, 207, 241, 269, 270, 317, 927
AsuC2I	CCSGG	4 cut(s)	277, 320, 392, 393
AsuHPI	GGTGA	4 cut(s)	475, 565, 649, 654
AvaI	CYCGRG	3 cut(s)	203, 391, 665
AvaII	GGWCC	2 cut(s)	207, 927
BaeGI	GKGCMC	2 cut(s)	273, 400
BaeI	ACNNNNGTAYC	2 cut(s)	850, 883
BalI	TGGCCA	2 cut(s)	5, 161
BamHI	GGATCC	1 cut(s)	248
BanI	GGYRCC	1 cut(s)	395
BanII	GRGCYC	4 cut(s)	273, 282, 309, 886
BbvI	GCAGC	5 cut(s)	462, 700, 728, 898, 901
BccI	CCATC	5 cut(s)	143, 542, 646, 848, 873
BceAI	ACGGC	4 cut(s)	115, 314, 425, 624
BciVI	GTATCC	1 cut(s)	851
BcnI	CCSGG	4 cut(s)	277, 320, 392, 393
BcoDI	GTCTC	1 cut(s)	819
BfmI	CTRYAG	2 cut(s)	476, 714
BfuI	GTATCC	1 cut(s)	851
BglI	GCCNNNNNGGC	2 cut(s)	277, 320
BisI	GCNGC	6 cut(s)	476, 714, 717, 749, 912, 915
BlsI	GCNGC	6 cut(s)	477, 715, 718, 750, 913, 916
Bme1390I	CCNGG	4 cut(s)	277, 320, 392, 393
Bme18I	GGWCC	2 cut(s)	207, 927
BmeT110I	CYCGRG	3 cut(s)	203, 391, 665
BmgT120I	GGNCC	7 cut(s)	91, 207, 241, 269, 270, 317, 927
BmrFI	CCNGG	4 cut(s)	277, 320, 392, 393
BmrI	ACTGGG	1 cut(s)	164
BmuI	ACTGGG	1 cut(s)	164
BpuMI	CCSGG	4 cut(s)	277, 320, 392, 393
BsaHI	GRCGYC	2 cut(s)	78, 438
BsaJI	CCNNGG	4 cut(s)	244, 286, 300, 391
Bsc4I	CCNNNNNNNGG	2 cut(s)	509, 607
Bse118I	RCCGGY	4 cut(s)	69, 128, 140, 314
Bse1I	ACTGG	1 cut(s)	170
BseDI	CCNNGG	4 cut(s)	244, 286, 300, 391
BseGI	GGATG	3 cut(s)	760, 859, 884
BseLI	CCNNNNNNNGG	2 cut(s)	509, 607
BseMII	CTCAG	2 cut(s)	68, 255
BseNI	ACTGG	1 cut(s)	170
BseSI	GKGCMC	2 cut(s)	273, 400
BseXI	GCAGC	5 cut(s)	462, 700, 728, 898, 901
BseYI	CCCAGC	1 cut(s)	907
Bsh1285I	CGRYCG	1 cut(s)	228
BshFI	GGCC	8 cut(s)	5, 92, 102, 161, 242, 271, 318, 731
BshNI	GGYRCC	1 cut(s)	395
BsiEI	CGRYCG	1 cut(s)	228
BsiHKCI	CYCGRG	3 cut(s)	203, 391, 665
BsiSI	CCGG	8 cut(s)	70, 129, 141, 235, 276, 315, 320, 392
BslI	CCNNNNNNNGG	2 cut(s)	509, 607
BsmAI	GTCTC	1 cut(s)	819
BsmBI	CGTCTC	1 cut(s)	819
BsmI	GAATGC	2 cut(s)	601, 897
BsnI	GGCC	8 cut(s)	5, 92, 102, 161, 242, 271, 318, 731
BsoBI	CYCGRG	3 cut(s)	203, 391, 665
Bsp120I	GGGCCC	1 cut(s)	269
Bsp1286I	GDGCHC	5 cut(s)	273, 282, 309, 400, 886
Bsp143I	GATC	2 cut(s)	123, 248
Bsp19I	CCATGG	1 cut(s)	300
BspACI	CCGC	7 cut(s)	273, 375, 529, 611, 635, 749, 792
BspANI	GGCC	8 cut(s)	5, 92, 102, 161, 242, 271, 318, 731
BspCNI	CTCAG	2 cut(s)	67, 256
BspHI	TCATGA	1 cut(s)	120
BspMAI	CTGCAG	2 cut(s)	480, 718
BspPI	GGATC	2 cut(s)	243, 256
BspQI	GCTCTTC	1 cut(s)	902
BspT107I	GGYRCC	1 cut(s)	395
BsrFI	RCCGGY	4 cut(s)	69, 128, 140, 314
BsrI	ACTGG	1 cut(s)	170
BssAI	RCCGGY	4 cut(s)	69, 128, 140, 314
BssECI	CCNNGG	4 cut(s)	244, 286, 300, 391
BssMI	GATC	2 cut(s)	123, 248
BssNI	GRCGYC	2 cut(s)	78, 438
BssT1I	CCWWGG	1 cut(s)	300
Bst4CI	ACNGT	6 cut(s)	85, 287, 427, 500, 586, 777
Bst6I	CTCTTC	2 cut(s)	635, 902
BstACI	GRCGYC	2 cut(s)	78, 438
BstAPI	GCANNNNNTGC	1 cut(s)	475
BstC8I	GCNNGC	8 cut(s)	130, 142, 198, 240, 273, 316, 433, 672
BstDEI	CTNAG	2 cut(s)	54, 264
BstDSI	CCRYGG	2 cut(s)	286, 300
BstF5I	GGATG	3 cut(s)	760, 859, 884
BstKTI	GATC	2 cut(s)	126, 251
BstMAI	GTCTC	1 cut(s)	819
BstMBI	GATC	2 cut(s)	123, 248
BstMCI	CGRYCG	1 cut(s)	228
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 277, 320, 428, 437, 475, 566, 713, 911
BstNSI	RCATGY	1 cut(s)	674
BstSCI	CCNGG	4 cut(s)	275, 318, 390, 391
BstSFI	CTRYAG	2 cut(s)	476, 714
BstSLI	GKGCMC	2 cut(s)	273, 400
BstV1I	GCAGC	5 cut(s)	462, 700, 728, 898, 901
BstX2I	RGATCY	1 cut(s)	248
BstYI	RGATCY	1 cut(s)	248
BsuI	GTATCC	1 cut(s)	851
BsuRI	GGCC	8 cut(s)	5, 92, 102, 161, 242, 271, 318, 731
BtgI	CCRYGG	2 cut(s)	286, 300
BtgZI	GCGATG	1 cut(s)	121
BtsCI	GGATG	3 cut(s)	760, 859, 884
BtsIMutI	CAGTG	2 cut(s)	177, 782
Cac8I	GCNNGC	8 cut(s)	130, 142, 198, 240, 273, 316, 433, 672
CaiI	CAGNNNCTG	2 cut(s)	475, 914
CciI	TCATGA	1 cut(s)	120
Cfr10I	RCCGGY	4 cut(s)	69, 128, 140, 314
Cfr13I	GGNCC	7 cut(s)	91, 207, 241, 269, 270, 317, 927
Cfr9I	CCCGGG	1 cut(s)	391
CseI	GACGC	3 cut(s)	86, 446, 558
Csp6I	GTAC	2 cut(s)	505, 574
CviQI	GTAC	2 cut(s)	505, 574
DdeI	CTNAG	2 cut(s)	54, 264
DpnI	GATC	2 cut(s)	125, 250
DpnII	GATC	2 cut(s)	123, 248
DraI	TTTAAA	2 cut(s)	258, 808
EaeI	YGGCCR	2 cut(s)	3, 159
Eam1104I	CTCTTC	2 cut(s)	635, 902
EarI	CTCTTC	2 cut(s)	635, 902
Eco130I	CCWWGG	1 cut(s)	300
Eco24I	GRGCYC	4 cut(s)	273, 282, 309, 886
Eco47I	GGWCC	2 cut(s)	207, 927
Eco88I	CYCGRG	3 cut(s)	203, 391, 665
EcoO109I	RGGNCCY	3 cut(s)	207, 241, 269
EcoT14I	CCWWGG	1 cut(s)	300
EcoT38I	GRGCYC	4 cut(s)	273, 282, 309, 886
ErhI	CCWWGG	1 cut(s)	300
Esp3I	CGTCTC	1 cut(s)	819
FalI	AAGNNNNNCTT	2 cut(s)	632, 664
FauI	CCCGC	2 cut(s)	280, 368
FauNDI	CATATG	2 cut(s)	192, 934
FblI	GTMKAC	1 cut(s)	333
Fnu4HI	GCNGC	6 cut(s)	476, 714, 717, 749, 912, 915
FokI	GGATG	3 cut(s)	767, 866, 891
FriOI	GRGCYC	4 cut(s)	273, 282, 309, 886
Fsp4HI	GCNGC	6 cut(s)	476, 714, 717, 749, 912, 915
GluI	GCNGC	6 cut(s)	476, 714, 717, 749, 912, 915
GsaI	CCCAGC	1 cut(s)	911
HaeIII	GGCC	8 cut(s)	5, 92, 102, 161, 242, 271, 318, 731
HapII	CCGG	8 cut(s)	70, 129, 141, 235, 276, 315, 320, 392
HgaI	GACGC	3 cut(s)	86, 446, 558
Hin1I	GRCGYC	2 cut(s)	78, 438
HinfI	GANTC	1 cut(s)	231
HpaII	CCGG	8 cut(s)	70, 129, 141, 235, 276, 315, 320, 392
HphI	GGTGA	4 cut(s)	475, 565, 649, 654
Hpy166II	GTNNAC	4 cut(s)	175, 334, 606, 930
Hpy188I	TCNGA	5 cut(s)	230, 248, 265, 311, 837
Hpy188III	TCNNGA	1 cut(s)	121
Hpy8I	GTNNAC	4 cut(s)	175, 334, 606, 930
Hpy99I	CGWCG	6 cut(s)	101, 440, 574, 586, 628, 683
HpyAV	CCTTC	2 cut(s)	526, 961
HpyCH4III	ACNGT	6 cut(s)	85, 287, 427, 500, 586, 777
HpyCH4IV	ACGT	2 cut(s)	626, 828
HpyCH4V	TGCA	4 cut(s)	196, 478, 616, 716
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 277, 320, 428, 437, 475, 566, 713, 911
HpyF3I	CTNAG	2 cut(s)	54, 264
HpySE526I	ACGT	2 cut(s)	626, 828
Hsp92I	GRCGYC	2 cut(s)	78, 438
KroI	GCCGGC	3 cut(s)	128, 140, 314
KroNI	GCCGGC	3 cut(s)	130, 142, 316
Kzo9I	GATC	2 cut(s)	123, 248
LguI	GCTCTTC	1 cut(s)	902
LmnI	GCTCC	4 cut(s)	137, 296, 311, 889
Lsp1109I	GCAGC	5 cut(s)	462, 700, 728, 898, 901
MaeII	ACGT	2 cut(s)	626, 828
MaeIII	GTNAC	2 cut(s)	739, 797
MalI	GATC	2 cut(s)	125, 250
MboI	GATC	2 cut(s)	123, 248
MboII	GAAGA	5 cut(s)	485, 557, 652, 889, 946
MflI	RGATCY	1 cut(s)	248
MhlI	GDGCHC	5 cut(s)	273, 282, 309, 400, 886
MlsI	TGGCCA	2 cut(s)	5, 161
MluCI	AATT	2 cut(s)	23, 770
MluNI	TGGCCA	2 cut(s)	5, 161
MlyI	GAGTC	1 cut(s)	240
MmeI	TCCRAC	1 cut(s)	208
Mox20I	TGGCCA	2 cut(s)	5, 161
MroNI	GCCGGC	3 cut(s)	128, 140, 314
MroXI	GAANNNNTTC	1 cut(s)	536
MscI	TGGCCA	2 cut(s)	5, 161
MseI	TTAA	3 cut(s)	219, 257, 807
MslI	CAYNNNNRTG	1 cut(s)	161
Msp20I	TGGCCA	2 cut(s)	5, 161
MspA1I	CMGCKG	3 cut(s)	719, 751, 911
MspI	CCGG	8 cut(s)	70, 129, 141, 235, 276, 315, 320, 392
MspR9I	CCNGG	4 cut(s)	277, 320, 392, 393
Mva1269I	GAATGC	2 cut(s)	601, 897
MwoI	GCNNNNNNNGC	9 cut(s)	11, 277, 320, 428, 437, 475, 566, 713, 911
NaeI	GCCGGC	3 cut(s)	130, 142, 316
NciI	CCSGG	4 cut(s)	277, 320, 392, 393
NcoI	CCATGG	1 cut(s)	300
NdeI	CATATG	2 cut(s)	192, 934
NdeII	GATC	2 cut(s)	123, 248
NgoMIV	GCCGGC	3 cut(s)	128, 140, 314
NmuCI	GTSAC	2 cut(s)	739, 797
NspI	RCATGY	1 cut(s)	674
PaeI	GCATGC	1 cut(s)	674
PagI	TCATGA	1 cut(s)	120
PciSI	GCTCTTC	1 cut(s)	902
PcsI	WCGNNNNNNNCGW	1 cut(s)	578
PctI	GAATGC	2 cut(s)	601, 897
PdiI	GCCGGC	3 cut(s)	130, 142, 316
PdmI	GAANNNNTTC	1 cut(s)	536
PkrI	GCNGC	6 cut(s)	477, 715, 718, 750, 913, 916
PleI	GAGTC	1 cut(s)	239
PpsI	GAGTC	1 cut(s)	239
PpuMI	RGGWCCY	1 cut(s)	207
Psp5II	RGGWCCY	1 cut(s)	207
PspFI	CCCAGC	1 cut(s)	907
PspOMI	GGGCCC	1 cut(s)	269
PspPI	GGNCC	7 cut(s)	91, 207, 241, 269, 270, 317, 927
PspPPI	RGGWCCY	1 cut(s)	207
PstI	CTGCAG	2 cut(s)	480, 718
PstNI	CAGNNNCTG	2 cut(s)	475, 914
PsuI	RGATCY	1 cut(s)	248
PvuII	CAGCTG	2 cut(s)	719, 911
RsaI	GTAC	2 cut(s)	506, 575
RsaNI	GTAC	2 cut(s)	505, 574
RseI	CAYNNNNRTG	1 cut(s)	161
SapI	GCTCTTC	1 cut(s)	902
SaqAI	TTAA	3 cut(s)	219, 257, 807
SatI	GCNGC	6 cut(s)	476, 714, 717, 749, 912, 915
Sau3AI	GATC	2 cut(s)	123, 248
Sau96I	GGNCC	7 cut(s)	91, 207, 241, 269, 270, 317, 927
SchI	GAGTC	1 cut(s)	240
ScrFI	CCNGG	4 cut(s)	277, 320, 392, 393
SduI	GDGCHC	5 cut(s)	273, 282, 309, 400, 886
SetI	ASST	9 cut(s)	202, 537, 629, 721, 831, 868, 913, 953, 1001
SfcI	CTRYAG	2 cut(s)	476, 714
SinI	GGWCC	2 cut(s)	207, 927
SmaI	CCCGGG	1 cut(s)	393
SmiMI	CAYNNNNRTG	1 cut(s)	161
SphI	GCATGC	1 cut(s)	674
Sse9I	AATT	2 cut(s)	23, 770
SsiI	CCGC	7 cut(s)	273, 375, 529, 611, 635, 749, 792
StyD4I	CCNGG	4 cut(s)	275, 318, 390, 391
StyI	CCWWGG	1 cut(s)	300
TaaI	ACNGT	6 cut(s)	85, 287, 427, 500, 586, 777
TaiI	ACGT	2 cut(s)	629, 831
TaqI	TCGA	2 cut(s)	150, 818
TaqII	GACCGA	1 cut(s)	214
TasI	AATT	2 cut(s)	23, 770
TauI	GCSGC	1 cut(s)	751
Tru1I	TTAA	3 cut(s)	219, 257, 807
Tru9I	TTAA	3 cut(s)	219, 257, 807
TscAI	CASTG	2 cut(s)	177, 782
TseFI	GTSAC	2 cut(s)	739, 797
TseI	GCWGC	5 cut(s)	475, 713, 716, 911, 914
Tsp45I	GTSAC	2 cut(s)	739, 797
TspDTI	ATGAA	4 cut(s)	109, 608, 686, 951
TspGWI	ACGGA	2 cut(s)	331, 492
TspMI	CCCGGG	1 cut(s)	391
TspRI	CASTG	2 cut(s)	177, 782
VpaK11BI	GGWCC	2 cut(s)	207, 927
XapI	RAATTY	1 cut(s)	23
XceI	RCATGY	1 cut(s)	674
XcmI	CCANNNNNNNNNTGG	3 cut(s)	142, 169, 965
XmaI	CCCGGG	1 cut(s)	391
XmiI	GTMKAC	1 cut(s)	333
XmnI	GAANNNNTTC	1 cut(s)	536

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.