Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0002913

Physical Location & Seq

Genomic Coordinates Forward (+)

4172589 .. 4173929

Gene Structure 1341 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0053800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1341 bp

ATGGCTTCTTTCCTTCAGTTTCTTCTCTTGTTCTCTTTATCTCTTCATCTTGCTTTTGTGTCCGCGGATGATCAGTCATCTGAAACACAAACTCAACCTCGACCCCCAACGCCTATTATCAGGCCAACCAAGCTTGTTCTGAAGGTGCAGAAAGATGGTGCTACGAATCTCCATGTAGCCCAGATTTTCAAGAGAACCCCTCCAGTTCAACTTCCCTTTGTGGTAGACCTTAACGGGGAGTTCGTATCGGTCAATTGTGAGAACAAGTACTTATCATCGACTTTCAATGCTCCTATTTGCCACTCGGCCCAATGCTCTAGAGCCAACACCCACACATGCCGCACGTGCTCTCCCAAATCCCCCAGATACCCCATGGCTAGACCTGGCTGCCACGTCAATGCATGCGCGGTCACGGCTGTGAACCCGGTTACCCAACAAAGAGCCATAGGCGAGCTCGCGGAGGATGTGCTTTCGATCCCATCAACCCTAGGCTCAAGGCCAGGCCCAATGGTCACAGTCCCTCAATTCCTCTTTGCATGTGCACCTTCTACCCTCTTGCAAAGAGGACTACCCCAAAACGTTCAAGGCATTGCTGGGATGGGCCACTCCCGAATTTCACTTCCATCCCAGCTTGCTTCCCAGTTCGGCCTCCCACCGAAGATCGCCATCTGCCTCGCTTCTGGCTCCGGACAAAATGGTGTCATTTTCTTTGGCGAGGGGCCGTACATGATGCTACCGGGCATCGATGTGTCCCGCCAGCTCACCTACGCCCCACTATCCATAGGCCAACGAGGAGAGTACTTGATAAACGTCCAATCCATCCAAATCAACAACAATATCGTTCCACTCCCTCCAAAATTTCGTTCTAACCAAGCCATGCTCAGCACCACAACTCCTTACACAATCCTGCATCAGTCCATCTTCATAGCTCTCACTCAACTCTACATCAAGCAGTTCTCGGGAGTGCCTCAAGTGACCGCGGTGCCGCCGTTCGGGCTGTGTTTCGATGCAAACAAAATCAGTTACAGCAAGATGGGTCCGGCAGTACCTAGCATTCAGCTTGTGTTGGACAACCAGCAGAAGCTTCGGTGGACAATCTATGGCCAAAATGTGATAGTTCAGGCACGTCCGGGAGTTATGTGCTTGGCCTTGGTGAACGGCGGGCCGAACCCTAAAACTCCGATCATGATCGGGGGACGCCAGATGGAGGATAACCTAGTGCAGCTGGATTTGGTGAACTCGAGGGTTGGCTTTAGCAACTCGTTGTTGTTCCAGAGGACCAACTGTGCCAACTTCAACTTCAACTTGAACTTCAACGCCAACACGACTGCTACTCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0005215 GO:0005381 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006810 GO:0006811 GO:0006812 GO:0006826 GO:0006839 GO:0008150 GO:0008324 GO:0015075 GO:0015318 GO:0016020 GO:0016021 GO:0019866 GO:0022857 GO:0022890 GO:0030001 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0034220 GO:0034755 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046915 GO:0048250 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055085 GO:0065007 GO:0065008 GO:0097286 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:1990542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

446

Amino Acids

48.42

Weight (kDa)

9.4

Isoelectric Point (pI)

41.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAXi_N	PF14543	60 - 238	2.9e-32	Xylanase inhibitor N-terminal
TAXi_C	PF14541	266 - 419	5.7e-44	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002913)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07030 AT2G30160
fragaria_vesca	FvH4_3g39670 FvH4_6g10760
malus_domestica	MD03G1055400.v1.1 MD04G1164600.v1.1 MD11G1056500.v1.1 MD12G1178600.v1.1
prunus_persica	Prupe.6G049200_v2.0.a1 Prupe.6G283800_v2.0.a1
pyrus_communis	pycom03g04410 pycom04g14690 pycom11g04760 pycom12g16860
rosa_chinensis	RchiOBHm_Chr3g0461801 RchiOBHm_Chr5g0071521
rosa_laevigata	RLG00000024897 RLG00000036221
rosa_multiflora	Rmu_co8336553.1_g000001 Rmu_sc0004308.1_g000012 Rmu_sc0005745.1_g000006 Rmu_sc0007777.1_g000002 Rmu_sc0022017.1_g000001 Rmu_sc0022018.1_g000001
rosa_roxburghii	Rroxscaffold_1G00009630 Rroxscaffold_6G00417910
rosa_rugosa	Rorug03G0053800 Rorug05G0412800
rosa_samantha	Rh3AG111800 Rh3BG115100 Rh3CG117300 Rh3DG116800 Rh5AG469000 Rh5BG488100 Rh5CG512200 Rh5DG498900
rosa_wichuraiana	Rw3G009480 Rw5G043570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	982
AccI	GTMKAC	1 cut(s)	225
AccII	CGCG	4 cut(s)	65, 407, 458, 980
AccIII	TCCGGA	1 cut(s)	686
AclI	AACGTT	1 cut(s)	579
AclWI	GGATC	1 cut(s)	469
AcoI	YGGCCR	1 cut(s)	1102
AcsI	RAATTY	2 cut(s)	612, 857
AcuI	CTGAAG	1 cut(s)	161
AcvI	CACGTG	1 cut(s)	345
AcyI	GRCGYC	1 cut(s)	1198
AfaI	GTAC	4 cut(s)	269, 725, 800, 1047
AfiI	CCNNNNNNNGG	3 cut(s)	235, 992, 1207
AgsI	TTSAA	8 cut(s)	190, 209, 286, 584, 1297, 1303, 1309, 1315
AjiI	CACGTC	2 cut(s)	394, 1127
AjnI	CCWGG	2 cut(s)	382, 499
AjuI	GAANNNNNNNTTGG	4 cut(s)	847, 879, 1283, 1315
AleI	CACNNNNGTG	1 cut(s)	416
AluBI	AGCT	8 cut(s)	133, 454, 631, 760, 929, 1060, 1084, 1225
AluI	AGCT	8 cut(s)	133, 454, 631, 760, 929, 1060, 1084, 1225
Alw21I	GWGCWC	3 cut(s)	350, 456, 544
Alw44I	GTGCAC	1 cut(s)	540
AlwI	GGATC	1 cut(s)	469
Ama87I	CYCGRG	2 cut(s)	958, 1240
Aor13HI	TCCGGA	1 cut(s)	686
ApaLI	GTGCAC	1 cut(s)	540
ApeKI	GCWGC	2 cut(s)	387, 1222
ApoI	RAATTY	2 cut(s)	612, 857
AspA2I	CCTAGG	1 cut(s)	487
AspLEI	GCGC	1 cut(s)	407
AspS9I	GGNCC	7 cut(s)	307, 503, 601, 719, 1037, 1163, 1278
AsuC2I	CCSGG	3 cut(s)	425, 738, 1131
AsuHPI	GGTGA	3 cut(s)	754, 1165, 1246
AvaI	CYCGRG	2 cut(s)	958, 1240
AvaII	GGWCC	2 cut(s)	1037, 1278
AvrII	CCTAGG	1 cut(s)	487
BaeGI	GKGCMC	1 cut(s)	544
BalI	TGGCCA	1 cut(s)	1104
BanI	GGYRCC	1 cut(s)	982
BanII	GRGCYC	1 cut(s)	456
BbrPI	CACGTG	1 cut(s)	345
Bbv12I	GWGCWC	3 cut(s)	350, 456, 544
BbvI	GCAGC	2 cut(s)	374, 1234
BccI	CCATC	9 cut(s)	149, 487, 592, 631, 674, 827, 926, 1027, 1198
BceAI	ACGGC	4 cut(s)	429, 706, 973, 1174
BcgI	CGANNNNNNTGC	2 cut(s)	1067, 1101
BciT130I	CCWGG	2 cut(s)	384, 501
BclI	TGATCA	1 cut(s)	70
BcnI	CCSGG	3 cut(s)	425, 738, 1131
BfaI	CTAG	5 cut(s)	318, 378, 488, 1050, 1217
BglI	GCCNNNNNGGC	1 cut(s)	994
BisI	GCNGC	4 cut(s)	340, 388, 986, 1223
BlnI	CCTAGG	1 cut(s)	487
BlpI	GCTNAGC	1 cut(s)	881
BlsI	GCNGC	4 cut(s)	341, 389, 987, 1224
BmcAI	AGTACT	2 cut(s)	269, 800
Bme1390I	CCNGG	5 cut(s)	384, 425, 501, 738, 1131
Bme18I	GGWCC	2 cut(s)	1037, 1278
BmeT110I	CYCGRG	2 cut(s)	958, 1240
BmgBI	CACGTC	2 cut(s)	394, 1127
BmgT120I	GGNCC	7 cut(s)	307, 503, 601, 719, 1037, 1163, 1278
BmiI	GGNNCC	4 cut(s)	685, 720, 984, 1038
BmrFI	CCNGG	5 cut(s)	384, 425, 501, 738, 1131
BmrI	ACTGGG	1 cut(s)	634
BmsI	GCATC	4 cut(s)	720, 750, 919, 997
BmuI	ACTGGG	1 cut(s)	634
BplI	GAGNNNNNCTC	2 cut(s)	184, 216
BpmI	CTGGAG	1 cut(s)	186
Bpu1102I	GCTNAGC	1 cut(s)	881
BpuEI	CTTGAG	2 cut(s)	478, 954
BpuMI	CCSGG	3 cut(s)	425, 738, 1131
Bsa29I	ATCGAT	1 cut(s)	744
BsaAI	YACGTR	1 cut(s)	345
BsaBI	GATNNNNATC	2 cut(s)	665, 1187
BsaHI	GRCGYC	1 cut(s)	1198
BsaJI	CCNNGG	5 cut(s)	63, 372, 487, 978, 1149
BsaWI	WCCGGW	1 cut(s)	686
BsaXI	ACNNNNNCTCC	5 cut(s)	334, 364, 877, 907, 1318
Bsc4I	CCNNNNNNNGG	3 cut(s)	235, 992, 1207
Bse1I	ACTGG	2 cut(s)	203, 640
Bse3DI	GCAATG	1 cut(s)	588
Bse8I	GATNNNNATC	2 cut(s)	665, 1187
BseAI	TCCGGA	1 cut(s)	686
BseBI	CCWGG	2 cut(s)	384, 501
BseCI	ATCGAT	1 cut(s)	744
BseDI	CCNNGG	5 cut(s)	63, 372, 487, 978, 1149
BseGI	GGATG	5 cut(s)	73, 469, 603, 623, 819
BseJI	GATNNNNATC	2 cut(s)	665, 1187
BseLI	CCNNNNNNNGG	3 cut(s)	235, 992, 1207
BseMI	GCAATG	1 cut(s)	588
BseMII	CTCAG	1 cut(s)	895
BseNI	ACTGG	2 cut(s)	203, 640
BseRI	GAGGAG	1 cut(s)	807
BseSI	GKGCMC	1 cut(s)	544
BseXI	GCAGC	2 cut(s)	374, 1234
BseYI	CCCAGC	2 cut(s)	593, 627
BsgI	GTGCAG	2 cut(s)	167, 1241
Bsh1236I	CGCG	4 cut(s)	65, 407, 458, 980
BshNI	GGYRCC	1 cut(s)	982
BshVI	ATCGAT	1 cut(s)	744
BsiHKAI	GWGCWC	3 cut(s)	350, 456, 544
BsiHKCI	CYCGRG	2 cut(s)	958, 1240
BsiSI	CCGG	5 cut(s)	425, 687, 737, 1040, 1130
BslFI	GGGAC	3 cut(s)	503, 736, 1209
BslI	CCNNNNNNNGG	3 cut(s)	235, 992, 1207
BsmFI	GGGAC	3 cut(s)	503, 736, 1209
BsmI	GAATGC	1 cut(s)	1053
BsoBI	CYCGRG	2 cut(s)	958, 1240
Bsp1286I	GDGCHC	3 cut(s)	350, 456, 544
Bsp13I	TCCGGA	1 cut(s)	686
Bsp143I	GATC	5 cut(s)	70, 474, 660, 1182, 1188
Bsp1720I	GCTNAGC	1 cut(s)	881
Bsp19I	CCATGG	1 cut(s)	372
BspCNI	CTCAG	1 cut(s)	894
BspDI	ATCGAT	1 cut(s)	744
BspEI	TCCGGA	1 cut(s)	686
BspFNI	CGCG	4 cut(s)	65, 407, 458, 980
BspHI	TCATGA	1 cut(s)	1185
BspLI	GGNNCC	4 cut(s)	685, 720, 984, 1038
BspPI	GGATC	1 cut(s)	469
BspT107I	GGYRCC	1 cut(s)	982
BsrDI	GCAATG	1 cut(s)	588
BsrI	ACTGG	2 cut(s)	203, 640
BssECI	CCNNGG	5 cut(s)	63, 372, 487, 978, 1149
BssMI	GATC	5 cut(s)	70, 474, 660, 1182, 1188
BssNI	GRCGYC	1 cut(s)	1198
BssT1I	CCWWGG	3 cut(s)	372, 487, 1149
Bst2UI	CCWGG	2 cut(s)	384, 501
Bst4CI	ACNGT	2 cut(s)	517, 1286
Bst6I	CTCTTC	1 cut(s)	48
BstACI	GRCGYC	1 cut(s)	1198
BstBAI	YACGTR	1 cut(s)	345
BstC8I	GCNNGC	6 cut(s)	403, 452, 456, 633, 758, 1163
BstDEI	CTNAG	1 cut(s)	881
BstDSI	CCRYGG	3 cut(s)	63, 372, 978
BstEII	GGTNACC	1 cut(s)	427
BstF5I	GGATG	5 cut(s)	73, 469, 603, 623, 819
BstFNI	CGCG	4 cut(s)	65, 407, 458, 980
BstHHI	GCGC	1 cut(s)	407
BstKTI	GATC	5 cut(s)	73, 477, 663, 1185, 1191
BstMBI	GATC	5 cut(s)	70, 474, 660, 1182, 1188
BstMWI	GCNNNNNNNGC	4 cut(s)	130, 345, 413, 994
BstNI	CCWGG	2 cut(s)	384, 501
BstNSI	RCATGY	3 cut(s)	339, 405, 540
BstPI	GGTNACC	1 cut(s)	427
BstSCI	CCNGG	5 cut(s)	382, 423, 499, 736, 1129
BstSLI	GKGCMC	1 cut(s)	544
BstUI	CGCG	4 cut(s)	65, 407, 458, 980
BstV1I	GCAGC	2 cut(s)	374, 1234
Bsu15I	ATCGAT	1 cut(s)	744
BsuTUI	ATCGAT	1 cut(s)	744
BtgI	CCRYGG	3 cut(s)	63, 372, 978
BtrI	CACGTC	2 cut(s)	394, 1127
BtsCI	GGATG	5 cut(s)	73, 469, 603, 623, 819
Cac8I	GCNNGC	6 cut(s)	403, 452, 456, 633, 758, 1163
CciI	TCATGA	1 cut(s)	1185
CfoI	GCGC	1 cut(s)	407
Cfr13I	GGNCC	7 cut(s)	307, 503, 601, 719, 1037, 1163, 1278
Cfr42I	CCGCGG	2 cut(s)	66, 981
ClaI	ATCGAT	1 cut(s)	744
CseI	GACGC	1 cut(s)	1206
Csp6I	GTAC	4 cut(s)	268, 724, 799, 1046
CviAII	CATG	8 cut(s)	173, 336, 373, 402, 537, 727, 877, 1186
CviQI	GTAC	4 cut(s)	268, 724, 799, 1046
DdeI	CTNAG	1 cut(s)	881
DpnI	GATC	5 cut(s)	72, 476, 662, 1184, 1190
DpnII	GATC	5 cut(s)	70, 474, 660, 1182, 1188
EaeI	YGGCCR	1 cut(s)	1102
Eam1104I	CTCTTC	1 cut(s)	48
EarI	CTCTTC	1 cut(s)	48
Ecl136II	GAGCTC	1 cut(s)	454
Eco130I	CCWWGG	3 cut(s)	372, 487, 1149
Eco24I	GRGCYC	1 cut(s)	456
Eco47I	GGWCC	2 cut(s)	1037, 1278
Eco53kI	GAGCTC	1 cut(s)	454
Eco57I	CTGAAG	1 cut(s)	161
Eco72I	CACGTG	1 cut(s)	345
Eco88I	CYCGRG	2 cut(s)	958, 1240
Eco91I	GGTNACC	1 cut(s)	427
EcoICRI	GAGCTC	1 cut(s)	454
EcoO65I	GGTNACC	1 cut(s)	427
EcoRII	CCWGG	2 cut(s)	382, 499
EcoT14I	CCWWGG	3 cut(s)	372, 487, 1149
EcoT22I	ATGCAT	1 cut(s)	403
EcoT38I	GRGCYC	1 cut(s)	456
ErhI	CCWWGG	3 cut(s)	372, 487, 1149
FaeI	CATG	8 cut(s)	176, 339, 376, 405, 540, 730, 880, 1189
FaqI	GGGAC	3 cut(s)	503, 736, 1209
FatI	CATG	8 cut(s)	172, 335, 372, 401, 536, 726, 876, 1185
FauI	CCCGC	2 cut(s)	761, 1154
FbaI	TGATCA	1 cut(s)	70
FblI	GTMKAC	1 cut(s)	225
Fnu4HI	GCNGC	4 cut(s)	340, 388, 986, 1223
FokI	GGATG	5 cut(s)	80, 476, 610, 610, 806
FriOI	GRGCYC	1 cut(s)	456
Fsp4HI	GCNGC	4 cut(s)	340, 388, 986, 1223
FspBI	CTAG	5 cut(s)	318, 378, 488, 1050, 1217
GlaI	GCGC	1 cut(s)	406
GluI	GCNGC	4 cut(s)	340, 388, 986, 1223
GsaI	CCCAGC	2 cut(s)	597, 631
GsuI	CTGGAG	1 cut(s)	186
HapII	CCGG	5 cut(s)	425, 687, 737, 1040, 1130
HgaI	GACGC	1 cut(s)	1206
HhaI	GCGC	1 cut(s)	407
Hin1I	GRCGYC	1 cut(s)	1198
Hin1II	CATG	8 cut(s)	176, 339, 376, 405, 540, 730, 880, 1189
Hin6I	GCGC	1 cut(s)	405
HinP1I	GCGC	1 cut(s)	405
HindIII	AAGCTT	2 cut(s)	131, 1082
HinfI	GANTC	1 cut(s)	166
HpaII	CCGG	5 cut(s)	425, 687, 737, 1040, 1130
HphI	GGTGA	3 cut(s)	754, 1165, 1246
Hpy166II	GTNNAC	6 cut(s)	226, 421, 542, 1092, 1156, 1237
Hpy188I	TCNGA	3 cut(s)	82, 141, 1182
Hpy188III	TCNNGA	7 cut(s)	190, 318, 609, 687, 960, 1186, 1273
Hpy8I	GTNNAC	6 cut(s)	226, 421, 542, 1092, 1156, 1237
HpyAV	CCTTC	3 cut(s)	23, 136, 555
HpyCH4III	ACNGT	2 cut(s)	517, 1286
HpyCH4IV	ACGT	5 cut(s)	344, 393, 579, 810, 1126
HpyCH4V	TGCA	8 cut(s)	148, 401, 536, 542, 559, 910, 1010, 1222
HpyF10VI	GCNNNNNNNGC	4 cut(s)	130, 345, 413, 994
HpyF3I	CTNAG	1 cut(s)	881
HpySE526I	ACGT	5 cut(s)	344, 393, 579, 810, 1126
Hsp92I	GRCGYC	1 cut(s)	1198
Hsp92II	CATG	8 cut(s)	176, 339, 376, 405, 540, 730, 880, 1189
HspAI	GCGC	1 cut(s)	405
Kpn2I	TCCGGA	1 cut(s)	686
Ksp22I	TGATCA	1 cut(s)	70
KspI	CCGCGG	2 cut(s)	66, 981
Kzo9I	GATC	5 cut(s)	70, 474, 660, 1182, 1188
LmnI	GCTCC	2 cut(s)	295, 689
Lsp1109I	GCAGC	2 cut(s)	374, 1234
LweI	GCATC	4 cut(s)	720, 750, 919, 997
MaeI	CTAG	5 cut(s)	318, 378, 488, 1050, 1217
MaeII	ACGT	5 cut(s)	344, 393, 579, 810, 1126
MaeIII	GTNAC	5 cut(s)	409, 427, 511, 973, 1022
MalI	GATC	5 cut(s)	72, 476, 662, 1184, 1190
MboI	GATC	5 cut(s)	70, 474, 660, 1182, 1188
MboII	GAAGA	4 cut(s)	14, 35, 670, 913
MfeI	CAATTG	1 cut(s)	253
MhlI	GDGCHC	3 cut(s)	350, 456, 544
MlsI	TGGCCA	1 cut(s)	1104
MluCI	AATT	4 cut(s)	253, 524, 612, 857
MluNI	TGGCCA	1 cut(s)	1104
MmeI	TCCRAC	1 cut(s)	1047
Mox20I	TGGCCA	1 cut(s)	1104
Mph1103I	ATGCAT	1 cut(s)	403
MroI	TCCGGA	1 cut(s)	686
MscI	TGGCCA	1 cut(s)	1104
MseI	TTAA	1 cut(s)	231
MslI	CAYNNNNRTG	3 cut(s)	396, 416, 746
Msp20I	TGGCCA	1 cut(s)	1104
MspA1I	CMGCKG	3 cut(s)	65, 980, 1225
MspI	CCGG	5 cut(s)	425, 687, 737, 1040, 1130
MspR9I	CCNGG	5 cut(s)	384, 425, 501, 738, 1131
MunI	CAATTG	1 cut(s)	253
Mva1269I	GAATGC	1 cut(s)	1053
MvaI	CCWGG	2 cut(s)	384, 501
MvnI	CGCG	4 cut(s)	65, 407, 458, 980
MwoI	GCNNNNNNNGC	4 cut(s)	130, 345, 413, 994
NciI	CCSGG	3 cut(s)	425, 738, 1131
NcoI	CCATGG	1 cut(s)	372
NdeII	GATC	5 cut(s)	70, 474, 660, 1182, 1188
NlaIII	CATG	8 cut(s)	176, 339, 376, 405, 540, 730, 880, 1189
NlaIV	GGNNCC	4 cut(s)	685, 720, 984, 1038
NmeAIII	GCCGAG	1 cut(s)	284
NmuCI	GTSAC	3 cut(s)	409, 511, 973
NsiI	ATGCAT	1 cut(s)	403
NspI	RCATGY	3 cut(s)	339, 405, 540
OliI	CACNNNNGTG	1 cut(s)	416
PaeI	GCATGC	1 cut(s)	405
PaeR7I	CTCGAG	1 cut(s)	1240
PagI	TCATGA	1 cut(s)	1185
PcsI	WCGNNNNNNNCGW	1 cut(s)	240
PctI	GAATGC	1 cut(s)	1053
PfeI	GAWTC	1 cut(s)	166
PfoI	TCCNGGA	1 cut(s)	1129
PkrI	GCNGC	4 cut(s)	341, 389, 987, 1224
PmaCI	CACGTG	1 cut(s)	345
PmlI	CACGTG	1 cut(s)	345
Ppu21I	YACGTR	1 cut(s)	345
Psp124BI	GAGCTC	1 cut(s)	456
Psp1406I	AACGTT	1 cut(s)	579
Psp6I	CCWGG	2 cut(s)	382, 499
PspCI	CACGTG	1 cut(s)	345
PspEI	GGTNACC	1 cut(s)	427
PspFI	CCCAGC	2 cut(s)	593, 627
PspGI	CCWGG	2 cut(s)	382, 499
PspN4I	GGNNCC	4 cut(s)	685, 720, 984, 1038
PspPI	GGNCC	7 cut(s)	307, 503, 601, 719, 1037, 1163, 1278
PspXI	VCTCGAGB	1 cut(s)	1240
PvuII	CAGCTG	1 cut(s)	1225
RsaI	GTAC	4 cut(s)	269, 725, 800, 1047
RsaNI	GTAC	4 cut(s)	268, 724, 799, 1046
RseI	CAYNNNNRTG	3 cut(s)	396, 416, 746
SacI	GAGCTC	1 cut(s)	456
SacII	CCGCGG	2 cut(s)	66, 981
SaqAI	TTAA	1 cut(s)	231
SatI	GCNGC	4 cut(s)	340, 388, 986, 1223
Sau3AI	GATC	5 cut(s)	70, 474, 660, 1182, 1188
Sau96I	GGNCC	7 cut(s)	307, 503, 601, 719, 1037, 1163, 1278
ScaI	AGTACT	2 cut(s)	269, 800
ScrFI	CCNGG	5 cut(s)	384, 425, 501, 738, 1131
SduI	GDGCHC	3 cut(s)	350, 456, 544
SfaNI	GCATC	4 cut(s)	720, 750, 919, 997
Sfr274I	CTCGAG	1 cut(s)	1240
Sfr303I	CCGCGG	2 cut(s)	66, 981
SgrBI	CCGCGG	2 cut(s)	66, 981
SinI	GGWCC	2 cut(s)	1037, 1278
SlaI	CTCGAG	1 cut(s)	1240
SmiMI	CAYNNNNRTG	3 cut(s)	396, 416, 746
SmlI	CTYRAG	3 cut(s)	493, 969, 1240
SmoI	CTYRAG	3 cut(s)	493, 969, 1240
SphI	GCATGC	1 cut(s)	405
Sse9I	AATT	4 cut(s)	253, 524, 612, 857
SspMI	CTAG	5 cut(s)	318, 378, 488, 1050, 1217
SstI	GAGCTC	1 cut(s)	456
StyD4I	CCNGG	5 cut(s)	382, 423, 499, 736, 1129
StyI	CCWWGG	3 cut(s)	372, 487, 1149
TaaI	ACNGT	2 cut(s)	517, 1286
TaiI	ACGT	5 cut(s)	347, 396, 582, 813, 1129
TaqI	TCGA	6 cut(s)	100, 278, 473, 744, 1005, 1241
TaqII	GACCGA	1 cut(s)	238
TasI	AATT	4 cut(s)	253, 524, 612, 857
TatI	WGTACW	2 cut(s)	267, 798
TauI	GCSGC	2 cut(s)	342, 988
TfiI	GAWTC	1 cut(s)	166
Tru1I	TTAA	1 cut(s)	231
Tru9I	TTAA	1 cut(s)	231
TseFI	GTSAC	3 cut(s)	409, 511, 973
TseI	GCWGC	2 cut(s)	387, 1222
Tsp45I	GTSAC	3 cut(s)	409, 511, 973
TspDTI	ATGAA	2 cut(s)	35, 913
VneI	GTGCAC	1 cut(s)	540
VpaK11BI	GGWCC	2 cut(s)	1037, 1278
XapI	RAATTY	2 cut(s)	612, 857
XbaI	TCTAGA	1 cut(s)	317
XceI	RCATGY	3 cut(s)	339, 405, 540
XcmI	CCANNNNNNNNNTGG	1 cut(s)	370
XhoI	CTCGAG	1 cut(s)	1240
XmaJI	CCTAGG	1 cut(s)	487
XmiI	GTMKAC	1 cut(s)	225
XspI	CTAG	5 cut(s)	318, 378, 488, 1050, 1217
ZrmI	AGTACT	2 cut(s)	269, 800
Zsp2I	ATGCAT	1 cut(s)	403

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.