AT1G10580

WD domain, G-beta repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0004435
Physical Location & Seq
Reverse (-)
3491258 .. 3493834
2577 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G10580.1

Sequence Viewer

Length: 1722 bp
ATGGATCTGATTCAATCCTACGAAGAAGAAGACGAAGCCGTTGCTTCCTCGCCGGAATCTTCACCGCCTCGTATGTTAAAGGCGAAATCATCGGCGCCGGAGGTAGACGATACGGCACTAGCTCTCACGGTGGCTAACGTGAATCAATCGAAATCGAAGCCGATTGACCCGACTCAACACGTCGTCTTTTATAACCCTACCCATGATCAGCTGTGGGCTCCGATGTTCGGCCCCGCGCATCCGTATGCGAAAGACGGGATCGCTCAAGGGATGCGGAATCATAAGCTAGGTTCTGTGGAAGATGCTTCGATTGGATCGTTTGGGTTTGAAGAGCAGTACCATACGTTTCATAAGTGCGGTTACGCGGCGGATCCGTCTGGGATGAACTACGTCGGCGATGTTGAGGCGTTTAAGAAGAACGATGGTCTTTCGGTTTTTAATATTCCTCAGAGTGAGCAGAAGCGGAGGAAGATTGAGAGGAGCAAAGAGGAGAGGGAAGGGGAAGAGAAAAAGGAAGAGATTGAGCCGGAAGCTGAGAATCCGGAGACGGAAGCTTGGCTTAGGAAGAATAGGAAGAGTCCGTGGTCGAGGAAGAAGGAGGTGGTTCAGGGAGAGTTGACGGAGGAGCAGAAGAAGTATGCGGAGGATCATGCCAAGAAGAAGGAGGAGAAGGGACAACAAGGTGAAACCAAAGGAGAGCATTATGCGGATAAGAGTACCTTCCATGGCAAAGAGGAGAAAGATTATCAAGGAAGGTCTTGGATTGAGGCTCCTAAAGATGCTAAGGCGAACAATGATCATTGCTACATTCCAAAACGTTTGGTTCATACATGGAGTGGGCACACGAAAGGTGTTTCCGCTATTAGGTTCTTCCCAAAGCAAGGACATTTGCTTCTCTCTGCAGGTATGGATTGTAAGGTTAAGATTTGGGATGTGTATAACTCTGGTAAATGTATGAGGACTTACATGGGTCACGCCAAAGCTGTGAGGGATATTTGCTTCTCCAATGATGGGTCTAAATTCTTGACTGCTGGGTATGATAAGAACATTAAGTATTGGGACACGGAAACTGGCCAAGTTATATCGACTTTCTCCACTGGGAAGATTCCGTATGTGGTTAAGCTGAATCCGGATGATGACAAGCAGAACATTTTGTTGGCTGGTATGAGTGATAAGAAGATTGTGCAGTGGGATATTAATACGGGGGAGGTTACGCAAGAGTATGATCAGCACTTGGGGGCAGTTAATACTATCACATTTGTGGACAATAACAGAAGATTTGTCACGTCGAGCGATGATAAGTCTCTCCGTGTTTGGGAATTTGGGATCCCGGTGGTTATCAAGTATATCAGTGAGCCTCATATGCATTCTATGCCTTCCATTTCTGTTCACCCGAATGGAAACTGGCTTGCTGCACAGAGTTTGGATAACCAGATTCTGATCTACAGTACCCGAGAAAGGTTTCAGCTGAATAAAAAGAAGAGGTTTGCAGGGCACATTGTTGCCGGTTATGCATGCCAAGTTAACTTCTCGCCAGATGGACGGTTTGTAATGTCAGGAGATGGTGAGGGTAAGTGCTGGTTTTGGGACTGGAAGAGCTGCAAAGTGTTTAGGACTCTTAAATGTCACAATGGAGTATGCATTGGAGCCGAGTGGCATCCTCTGGAACAGAGTAAAGTCGCAACTTGTGGTTGGGACGGCTTGATTAAGTACTGGGACTAA

Protein Analysis

573

Amino Acids

65.13

Weight (kDa)

6.61

Isoelectric Point (pI)

47.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40 PF00400 273 - 311 1.5e-08 WD domain, G-beta repeat
Beta-prop_THOC3 PF25174 274 - 379 1.6e-17 THOC3 beta-propeller domain
Beta-prop_WDR3_1st PF25173 274 - 365 4.9e-17 WDR3 first beta-propeller domain
WD40_MABP1-WDR62_2nd PF24782 274 - 440 1.9e-11 MABP1/WDR62 second WD40 domain
WD40_CDC20-Fz PF24807 274 - 439 1.2e-17 CDC20/Fizzy WD40 domain
WD40_Gbeta PF25391 277 - 367 1e-08 G protein beta WD-40 repeat protein
Beta-prop_WDR5 PF25175 278 - 572 7.7e-53 WDR5 beta-propeller domain
EIF3I PF24805 279 - 379 9.8e-13 EIF3I
Beta-prop_WDR3_2nd PF25172 280 - 355 1.5e-09 WDR3 second beta-propeller domain
WD40_Prp19 PF24814 281 - 365 8.9e-12 Prp19 WD40 domain
WDR55 PF24796 284 - 441 2.3e-17 WDR55
Beta-prop_EML PF23409 303 - 481 1.1e-07 Echinoderm microtubule-associated protein first beta-propeller
WD40 PF00400 316 - 354 2.5e-09 WD domain, G-beta repeat
Beta-prop_WDR36-Utp21_2nd PF25168 316 - 380 5.5e-10 WDR36/Utp21 second beta-propeller domain
Beta-prop_TEP1_2nd PF25047 319 - 441 9.9e-11 TEP-1 second beta-propeller
Beta-prop_WDR41 PF25178 323 - 444 7.6e-07 WDR41
WD40_RFWD3 PF23419 325 - 400 3.2e-07 E3 ubiquitin-protein ligase RFWD3 WD40 domain
Beta-prop_EML_2 PF23414 340 - 440 1.7e-07 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR90_POC16_2nd PF23393 341 - 437 5.8e-06 WDR90/POC16, second beta-propeller
WD40_Gbeta PF25391 342 - 441 6.5e-10 G protein beta WD-40 repeat protein
Beta-prop_WDR36-Utp21_1st PF25171 357 - 441 2.3e-08 WDR36/Utp21 first beta-propeller
WD40_Prp19 PF24814 372 - 546 4.3e-23 Prp19 WD40 domain
Beta-prop_WDR3_1st PF25173 379 - 483 6.6e-12 WDR3 first beta-propeller domain
WD40_CDC20-Fz PF24807 380 - 499 9.6e-09 CDC20/Fizzy WD40 domain
WD40_WDHD1_1st PF24817 381 - 567 2.2e-13 WDHD1 first WD40 domain
Beta-prop_WDR3_2nd PF25172 382 - 484 4.8e-08 WDR3 second beta-propeller domain
EIF3I PF24805 383 - 545 3.7e-08 EIF3I
Beta-prop_WDR36-Utp21_2nd PF25168 384 - 488 4.7e-08 WDR36/Utp21 second beta-propeller domain
Beta-prop_THOC3 PF25174 384 - 573 1.1e-23 THOC3 beta-propeller domain
WDR90_beta-prop_4th PF23342 415 - 549 8.1e-06 WDR90, 4th beta-propeller
WD40_CDC20-Fz PF24807 454 - 573 1.1e-08 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st PF25173 454 - 573 3.8e-09 WDR3 first beta-propeller domain
Beta-prop_EML_2 PF23414 456 - 537 1.7e-08 Echinoderm microtubule-associated protein second beta-propeller
WDR55 PF24796 459 - 573 2e-06 WDR55
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 192
Acc36I ACCTGC 1 cut(s) 893
AccB1I GGYRCC 1 cut(s) 94
AccI GTMKAC 1 cut(s) 105
AccII CGCG 2 cut(s) 236, 365
AccIII TCCGGA 2 cut(s) 541, 1129
AclI AACGTT 1 cut(s) 817
AclWI GGATC 8 cut(s) 12, 266, 322, 365, 378, 654, 1321, 1334
AcoI YGGCCR 1 cut(s) 1072
AcsI RAATTY 2 cut(s) 1019, 1319
AcyI GRCGYC 1 cut(s) 95
AfaI GTAC 4 cut(s) 338, 718, 1450, 1712
AfiI CCNNNNNNNGG 6 cut(s) 227, 864, 881, 1011, 1315, 1458
AflIII ACRYGT 1 cut(s) 178
AgsI TTSAA 2 cut(s) 14, 329
AjiI CACGTC 2 cut(s) 181, 1287
AjuI GAANNNNNNNTTGG 2 cut(s) 1139, 1171
AleI CACNNNNGTG 1 cut(s) 1259
AluBI AGCT 9 cut(s) 122, 211, 286, 533, 554, 983, 1123, 1468, 1599
AluI AGCT 9 cut(s) 122, 211, 286, 533, 554, 983, 1123, 1468, 1599
Alw26I GTCTC 2 cut(s) 539, 1308
AlwI GGATC 8 cut(s) 12, 266, 322, 365, 378, 654, 1321, 1334
AlwNI CAGNNNCTG 1 cut(s) 1438
Ama87I CYCGRG 1 cut(s) 1452
Aor13HI TCCGGA 2 cut(s) 541, 1129
AoxI GGCC 2 cut(s) 229, 1072
ApeKI GCWGC 2 cut(s) 1412, 1599
ApoI RAATTY 2 cut(s) 1019, 1319
AseI ATTAAT 1 cut(s) 1197
Asp700I GAANNNNTTC 1 cut(s) 1461
AspLEI GCGC 2 cut(s) 97, 238
AspS9I GGNCC 1 cut(s) 230
AsuC2I CCSGG 1 cut(s) 1331
AsuHPI GGTGA 4 cut(s) 54, 695, 1382, 1577
AvaI CYCGRG 1 cut(s) 1452
BaeGI GKGCMC 2 cut(s) 843, 1497
BalI TGGCCA 1 cut(s) 1074
BamHI GGATCC 2 cut(s) 370, 1326
BanI GGYRCC 1 cut(s) 94
BanII GRGCYC 1 cut(s) 220
BbsI GAAGAC 1 cut(s) 36
BbvI GCAGC 2 cut(s) 1399, 1586
BccI CCATC 4 cut(s) 416, 1004, 1532, 1556
BceAI ACGGC 3 cut(s) 23, 129, 1714
BcgI CGANNNNNNTGC 2 cut(s) 23, 57
BclI TGATCA 3 cut(s) 205, 796, 1225
BcnI CCSGG 1 cut(s) 1331
BcoDI GTCTC 2 cut(s) 539, 1308
BfaI CTAG 2 cut(s) 119, 287
BfmI CTRYAG 2 cut(s) 900, 1444
BfoI RGCGCY 1 cut(s) 98
BfuAI ACCTGC 1 cut(s) 893
BisI GCNGC 3 cut(s) 366, 1413, 1600
BlsI GCNGC 3 cut(s) 367, 1414, 1601
BmcAI AGTACT 1 cut(s) 1712
Bme1390I CCNGG 1 cut(s) 1331
BmeT110I CYCGRG 1 cut(s) 1452
BmgBI CACGTC 2 cut(s) 181, 1287
BmgT120I GGNCC 1 cut(s) 230
BmiI GGNNCC 7 cut(s) 96, 219, 232, 372, 771, 1328, 1648
BmrFI CCNGG 1 cut(s) 1331
BmrI ACTGGG 1 cut(s) 1107
BmsI GCATC 5 cut(s) 247, 261, 292, 769, 1666
BmuI ACTGGG 1 cut(s) 1107
BpiI GAAGAC 1 cut(s) 36
Bpu10I CCTNAGC 2 cut(s) 560, 783
BpuEI CTTGAG 1 cut(s) 249
BpuMI CCSGG 1 cut(s) 1331
BsaBI GATNNNNATC 1 cut(s) 1439
BsaHI GRCGYC 1 cut(s) 95
BsaJI CCNNGG 2 cut(s) 581, 724
BsaWI WCCGGW 2 cut(s) 541, 1129
Bsc4I CCNNNNNNNGG 6 cut(s) 227, 864, 881, 1011, 1315, 1458
Bse118I RCCGGY 1 cut(s) 1505
Bse1I ACTGG 5 cut(s) 1075, 1102, 1409, 1595, 1718
Bse3DI GCAATG 1 cut(s) 799
Bse8I GATNNNNATC 1 cut(s) 1439
BseAI TCCGGA 2 cut(s) 541, 1129
BseDI CCNNGG 2 cut(s) 581, 724
BseGI GGATG 6 cut(s) 238, 276, 387, 937, 1138, 1657
BseJI GATNNNNATC 1 cut(s) 1439
BseLI CCNNNNNNNGG 6 cut(s) 227, 864, 881, 1011, 1315, 1458
BseMI GCAATG 1 cut(s) 799
BseMII CTCAG 2 cut(s) 461, 525
BseNI ACTGG 5 cut(s) 1075, 1102, 1409, 1595, 1718
BseRI GAGGAG 5 cut(s) 493, 503, 638, 680, 749
BseSI GKGCMC 2 cut(s) 843, 1497
BseXI GCAGC 2 cut(s) 1399, 1586
BseYI CCCAGC 1 cut(s) 1031
BsgI GTGCAG 2 cut(s) 1205, 1398
Bsh1236I CGCG 2 cut(s) 236, 365
BshFI GGCC 2 cut(s) 231, 1074
BshNI GGYRCC 1 cut(s) 94
BsiHKCI CYCGRG 1 cut(s) 1452
BsiSI CCGG 7 cut(s) 53, 98, 527, 542, 1130, 1331, 1506
BslFI GGGAC 4 cut(s) 687, 1073, 1601, 1709
BslI CCNNNNNNNGG 6 cut(s) 227, 864, 881, 1011, 1315, 1458
BsmAI GTCTC 2 cut(s) 539, 1308
BsmBI CGTCTC 1 cut(s) 539
BsmFI GGGAC 4 cut(s) 687, 1073, 1601, 1709
BsmI GAATGC 1 cut(s) 1366
BsnI GGCC 2 cut(s) 231, 1074
BsoBI CYCGRG 1 cut(s) 1452
Bsp1286I GDGCHC 3 cut(s) 220, 843, 1497
Bsp13I TCCGGA 2 cut(s) 541, 1129
Bsp19I CCATGG 1 cut(s) 724
BspANI GGCC 2 cut(s) 231, 1074
BspCNI CTCAG 2 cut(s) 460, 526
BspEI TCCGGA 2 cut(s) 541, 1129
BspFNI CGCG 2 cut(s) 236, 365
BspLI GGNNCC 7 cut(s) 96, 219, 232, 372, 771, 1328, 1648
BspMAI CTGCAG 1 cut(s) 904
BspMI ACCTGC 1 cut(s) 893
BspPI GGATC 8 cut(s) 12, 266, 322, 365, 378, 654, 1321, 1334
BspQI GCTCTTC 2 cut(s) 324, 1589
BspT107I GGYRCC 1 cut(s) 94
BsrDI GCAATG 1 cut(s) 799
BsrFI RCCGGY 1 cut(s) 1505
BsrI ACTGG 5 cut(s) 1075, 1102, 1409, 1595, 1718
BssAI RCCGGY 1 cut(s) 1505
BssECI CCNNGG 2 cut(s) 581, 724
BssNI GRCGYC 1 cut(s) 95
BssT1I CCWWGG 1 cut(s) 724
Bst4CI ACNGT 3 cut(s) 130, 1448, 1545
Bst6I CTCTTC 6 cut(s) 324, 498, 510, 569, 1475, 1589
BstACI GRCGYC 1 cut(s) 95
BstAPI GCANNNNNTGC 1 cut(s) 1372
BstC8I GCNNGC 2 cut(s) 1410, 1516
BstDEI CTNAG 4 cut(s) 447, 534, 560, 783
BstDSI CCRYGG 2 cut(s) 581, 724
BstF5I GGATG 6 cut(s) 238, 276, 387, 937, 1138, 1657
BstFNI CGCG 2 cut(s) 236, 365
BstH2I RGCGCY 1 cut(s) 98
BstHHI GCGC 2 cut(s) 97, 238
BstMAI GTCTC 2 cut(s) 539, 1308
BstMWI GCNNNNNNNGC 3 cut(s) 1363, 1372, 1511
BstNSI RCATGY 1 cut(s) 1518
BstSCI CCNGG 1 cut(s) 1329
BstSFI CTRYAG 2 cut(s) 900, 1444
BstSLI GKGCMC 2 cut(s) 843, 1497
BstUI CGCG 2 cut(s) 236, 365
BstV1I GCAGC 2 cut(s) 1399, 1586
BstV2I GAAGAC 1 cut(s) 36
BstX2I RGATCY 3 cut(s) 4, 370, 1326
BstYI RGATCY 3 cut(s) 4, 370, 1326
BsuRI GGCC 2 cut(s) 231, 1074
BtgI CCRYGG 2 cut(s) 581, 724
BtgZI GCGATG 2 cut(s) 411, 1308
BtrI CACGTC 2 cut(s) 181, 1287
BtsCI GGATG 6 cut(s) 238, 276, 387, 937, 1138, 1657
BtsI GCAGTG 1 cut(s) 1193
BtsIMutI CAGTG 3 cut(s) 1095, 1193, 1357
BveI ACCTGC 1 cut(s) 893
Cac8I GCNNGC 2 cut(s) 1410, 1516
CaiI CAGNNNCTG 1 cut(s) 1438
CfoI GCGC 2 cut(s) 97, 238
Cfr10I RCCGGY 1 cut(s) 1505
Cfr13I GGNCC 1 cut(s) 230
Csp6I GTAC 4 cut(s) 337, 717, 1449, 1711
CviAII CATG 6 cut(s) 203, 650, 725, 831, 967, 1515
CviQI GTAC 4 cut(s) 337, 717, 1449, 1711
DdeI CTNAG 4 cut(s) 447, 534, 560, 783
DinI GGCGCC 1 cut(s) 96
EaeI YGGCCR 1 cut(s) 1072
Eam1104I CTCTTC 6 cut(s) 324, 498, 510, 569, 1475, 1589
EarI CTCTTC 6 cut(s) 324, 498, 510, 569, 1475, 1589
EciI GGCGGA 1 cut(s) 383
Eco130I CCWWGG 1 cut(s) 724
Eco24I GRGCYC 1 cut(s) 220
Eco88I CYCGRG 1 cut(s) 1452
EcoT14I CCWWGG 1 cut(s) 724
EcoT22I ATGCAT 3 cut(s) 1368, 1516, 1643
EcoT38I GRGCYC 1 cut(s) 220
EgeI GGCGCC 1 cut(s) 96
EheI GGCGCC 1 cut(s) 96
ErhI CCWWGG 1 cut(s) 724
Esp3I CGTCTC 1 cut(s) 539
FaeI CATG 6 cut(s) 206, 653, 728, 834, 970, 1518
FalI AAGNNNNNCTT 4 cut(s) 543, 575, 704, 736
FaqI GGGAC 4 cut(s) 687, 1073, 1601, 1709
FatI CATG 6 cut(s) 202, 649, 724, 830, 966, 1514
FauI CCCGC 1 cut(s) 241
FauNDI CATATG 1 cut(s) 1362
FbaI TGATCA 3 cut(s) 205, 796, 1225
FblI GTMKAC 1 cut(s) 105
Fnu4HI GCNGC 3 cut(s) 366, 1413, 1600
FokI GGATG 6 cut(s) 225, 283, 394, 944, 1145, 1644
FriOI GRGCYC 1 cut(s) 220
Fsp4HI GCNGC 3 cut(s) 366, 1413, 1600
FspBI CTAG 2 cut(s) 119, 287
GlaI GCGC 2 cut(s) 96, 237
GluI GCNGC 3 cut(s) 366, 1413, 1600
GsaI CCCAGC 1 cut(s) 1035
HaeII RGCGCY 1 cut(s) 98
HaeIII GGCC 2 cut(s) 231, 1074
HapII CCGG 7 cut(s) 53, 98, 527, 542, 1130, 1331, 1506
HhaI GCGC 2 cut(s) 97, 238
Hin1I GRCGYC 1 cut(s) 95
Hin1II CATG 6 cut(s) 206, 653, 728, 834, 970, 1518
Hin6I GCGC 2 cut(s) 95, 236
HinP1I GCGC 2 cut(s) 95, 236
HincII GTYRAC 2 cut(s) 618, 1525
HindII GTYRAC 2 cut(s) 618, 1525
HindIII AAGCTT 1 cut(s) 552
HpaI GTTAAC 1 cut(s) 1525
HpaII CCGG 7 cut(s) 53, 98, 527, 542, 1130, 1331, 1506
HphI GGTGA 4 cut(s) 54, 695, 1382, 1577
Hpy166II GTNNAC 5 cut(s) 106, 618, 1264, 1390, 1525
Hpy188I TCNGA 4 cut(s) 9, 222, 450, 1440
Hpy188III TCNNGA 5 cut(s) 542, 1024, 1130, 1557, 1664
Hpy8I GTNNAC 5 cut(s) 106, 618, 1264, 1390, 1525
Hpy99I CGWCG 3 cut(s) 185, 395, 1291
HpyAV CCTTC 7 cut(s) 491, 589, 655, 664, 730, 747, 1386
HpyCH4III ACNGT 3 cut(s) 130, 1448, 1545
HpyCH4IV ACGT 6 cut(s) 138, 180, 344, 390, 817, 1286
HpyCH4V TGCA 8 cut(s) 902, 1186, 1366, 1415, 1490, 1514, 1602, 1641
HpyF10VI GCNNNNNNNGC 3 cut(s) 1363, 1372, 1511
HpyF3I CTNAG 4 cut(s) 447, 534, 560, 783
HpySE526I ACGT 6 cut(s) 138, 180, 344, 390, 817, 1286
Hsp92I GRCGYC 1 cut(s) 95
Hsp92II CATG 6 cut(s) 206, 653, 728, 834, 970, 1518
HspAI GCGC 2 cut(s) 95, 236
KasI GGCGCC 1 cut(s) 94
Kpn2I TCCGGA 2 cut(s) 541, 1129
Ksp22I TGATCA 3 cut(s) 205, 796, 1225
KspAI GTTAAC 1 cut(s) 1525
LguI GCTCTTC 2 cut(s) 324, 1589
LmnI GCTCC 5 cut(s) 223, 480, 625, 775, 1646
Lsp1109I GCAGC 2 cut(s) 1399, 1586
LweI GCATC 5 cut(s) 247, 261, 292, 769, 1666
MaeI CTAG 2 cut(s) 119, 287
MaeII ACGT 6 cut(s) 138, 180, 344, 390, 817, 1286
MaeIII GTNAC 5 cut(s) 359, 971, 1210, 1282, 1625
MflI RGATCY 3 cut(s) 4, 370, 1326
MhlI GDGCHC 3 cut(s) 220, 843, 1497
MlsI TGGCCA 1 cut(s) 1074
MluCI AATT 2 cut(s) 1019, 1319
MluNI TGGCCA 1 cut(s) 1074
Mly113I GGCGCC 1 cut(s) 95
MlyI GAGTC 3 cut(s) 166, 586, 1609
Mox20I TGGCCA 1 cut(s) 1074
Mph1103I ATGCAT 3 cut(s) 1368, 1516, 1643
MroI TCCGGA 2 cut(s) 541, 1129
MroXI GAANNNNTTC 1 cut(s) 1461
MscI TGGCCA 1 cut(s) 1074
MslI CAYNNNNRTG 3 cut(s) 243, 1259, 1395
Msp20I TGGCCA 1 cut(s) 1074
MspA1I CMGCKG 2 cut(s) 211, 1468
MspI CCGG 7 cut(s) 53, 98, 527, 542, 1130, 1331, 1506
MspR9I CCNGG 1 cut(s) 1331
Mva1269I GAATGC 1 cut(s) 1366
MvnI CGCG 2 cut(s) 236, 365
MwoI GCNNNNNNNGC 3 cut(s) 1363, 1372, 1511
NarI GGCGCC 1 cut(s) 95
NciI CCSGG 1 cut(s) 1331
NcoI CCATGG 1 cut(s) 724
NdeI CATATG 1 cut(s) 1362
NlaIII CATG 6 cut(s) 206, 653, 728, 834, 970, 1518
NlaIV GGNNCC 7 cut(s) 96, 219, 232, 372, 771, 1328, 1648
NmeAIII GCCGAG 1 cut(s) 1675
NmuCI GTSAC 3 cut(s) 971, 1282, 1625
NsiI ATGCAT 3 cut(s) 1368, 1516, 1643
NspI RCATGY 1 cut(s) 1518
OliI CACNNNNGTG 1 cut(s) 1259
PaeI GCATGC 1 cut(s) 1518
PciSI GCTCTTC 2 cut(s) 324, 1589
PcsI WCGNNNNNNNCGW 1 cut(s) 314
PctI GAATGC 1 cut(s) 1366
PdmI GAANNNNTTC 1 cut(s) 1461
PfeI GAWTC 8 cut(s) 10, 56, 142, 277, 538, 1105, 1126, 1435
PkrI GCNGC 3 cut(s) 367, 1414, 1601
PleI GAGTC 3 cut(s) 166, 585, 1609
PluTI GGCGCC 1 cut(s) 98
PpsI GAGTC 3 cut(s) 166, 585, 1609
PshBI ATTAAT 1 cut(s) 1197
PsiI TTATAA 1 cut(s) 192
Psp1406I AACGTT 1 cut(s) 817
PspFI CCCAGC 1 cut(s) 1031
PspN4I GGNNCC 7 cut(s) 96, 219, 232, 372, 771, 1328, 1648
PspPI GGNCC 1 cut(s) 230
PstI CTGCAG 1 cut(s) 904
PstNI CAGNNNCTG 1 cut(s) 1438
PsuI RGATCY 3 cut(s) 4, 370, 1326
PvuII CAGCTG 2 cut(s) 211, 1468
RsaI GTAC 4 cut(s) 338, 718, 1450, 1712
RsaNI GTAC 4 cut(s) 337, 717, 1449, 1711
RseI CAYNNNNRTG 3 cut(s) 243, 1259, 1395
SapI GCTCTTC 2 cut(s) 324, 1589
SatI GCNGC 3 cut(s) 366, 1413, 1600
Sau96I GGNCC 1 cut(s) 230
ScaI AGTACT 1 cut(s) 1712
SchI GAGTC 3 cut(s) 166, 586, 1609
ScrFI CCNGG 1 cut(s) 1331
SduI GDGCHC 3 cut(s) 220, 843, 1497
SfaNI GCATC 5 cut(s) 247, 261, 292, 769, 1666
SfcI CTRYAG 2 cut(s) 900, 1444
SfoI GGCGCC 1 cut(s) 96
SmiMI CAYNNNNRTG 3 cut(s) 243, 1259, 1395
SmlI CTYRAG 1 cut(s) 264
SmoI CTYRAG 1 cut(s) 264
SphI GCATGC 1 cut(s) 1518
Sse9I AATT 2 cut(s) 1019, 1319
SspDI GGCGCC 1 cut(s) 94
SspI AATATT 1 cut(s) 442
SspMI CTAG 2 cut(s) 119, 287
StyD4I CCNGG 1 cut(s) 1329
StyI CCWWGG 1 cut(s) 724
TaaI ACNGT 3 cut(s) 130, 1448, 1545
TaiI ACGT 6 cut(s) 141, 183, 347, 393, 820, 1289
TaqI TCGA 6 cut(s) 149, 155, 308, 587, 1085, 1289
TasI AATT 2 cut(s) 1019, 1319
TatI WGTACW 1 cut(s) 1710
TauI GCSGC 1 cut(s) 368
TfiI GAWTC 8 cut(s) 10, 56, 142, 277, 538, 1105, 1126, 1435
TscAI CASTG 3 cut(s) 1102, 1193, 1357
TseFI GTSAC 3 cut(s) 971, 1282, 1625
TseI GCWGC 2 cut(s) 1412, 1599
Tsp45I GTSAC 3 cut(s) 971, 1282, 1625
TspDTI ATGAA 3 cut(s) 338, 398, 815
TspGWI ACGGA 8 cut(s) 231, 363, 563, 570, 635, 1079, 1098, 1298
TspRI CASTG 3 cut(s) 1102, 1193, 1357
VspI ATTAAT 1 cut(s) 1197
XapI RAATTY 2 cut(s) 1019, 1319
XceI RCATGY 1 cut(s) 1518
XmiI GTMKAC 1 cut(s) 105
XmnI GAANNNNTTC 1 cut(s) 1461
XspI CTAG 2 cut(s) 119, 287
ZrmI AGTACT 1 cut(s) 1712
Zsp2I ATGCAT 3 cut(s) 1368, 1516, 1643
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.