Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0010179.1

Orthogroup ID

OG0004435

Physical Location & Seq

Genomic Coordinates Forward (+)

10283 .. 13400

Gene Structure 3118 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0010179.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

atggatctcctccaagcctactccgacgaccaaaaccctaattcctccccggaatcttcgcctccgcggctcctcccacccaagtccgccgcgccccaggtcgacgacaccatgctggccctgtcggtggccaagaaccgcagcgtattgtcccggcccatcgacccgacgcagcacctcgtcgacttcaacccgacctacgaccagctctgggccccaatctacggcccatctcacccttacgccaaggacggcctcgcccagggcatgcgcaaccacaagctagggttcgtcgaggacgccgccatcgagcccttcattttcgacgagcagtacaacactttccagaactacggctacgccgccgacccctccgcctccgccggctacaattacgtcggcgatttggccgccttgcagaaaaacgacgccgtttcggtgtacaacatcccccagcacgagcagaagaagcggaagattgagaagaggaaggagaacgaggatggtgaagaagacgccgagatggacccggaggaggtggcgaacccggccagcgacgcgtggctgatgaagaataagaagagcccatgggccgggaagaaggagggtttgccggcggagctgacggaggagcagaagaaatatgcagaggaatatgcgaagaagaaaggtgaagagaaaggtgccggcgacaagggagaggctgtggttgagaagactactttccacggcaaagaagagagagactatcaaggaaggtcttggattgcgccgccgagagatgccaaggctactaatgatcactgttacattccgaaacggcttgtgcatacttggagtggtcacaccaagggtgtgtctgctattaggttcttcccgaattcggggcatttgattctctctgcagggctggatactaaggtgaagatttgggatgtgttcaacactggtaagtgtatgagaacttacatggggcattcgaagggtgttagggatatttgtttttcgaatgatgggagtaagtttttgagtgctggttatgataagaatatcaagtattgggatacggaaactgggcaggtgatatctacattttcgactgggaaggttccctatgtggtgaagcttaatccggatgaggataagcagaatgtgttgttggctgggatgagtgataagaagattgttcagtgggatatgaatgaggggaagatcactcaagagtatgatcagcatttgggtgcggtgaatactattacatttgttgataataatcgaaggtttgttacttccagtgatgacaagtctcttcgtgtatgggagtttgggattcctgtggttatcaagtatattagcgagcctcacatgcattctatgccatcaatttcgttgcaccccaattcgaattggcttgcagcacaaagtatggacaaccagattcttatttacagcactagggagaagtttcagctcaataagaagaagaggtttgcaggacatgttgttgcggggtatgcttgccaagtgaatttctcgcctgatggacggtttgttttctcgggtgatggtgaaggtcgatgctggttttgggattggaagacttgcaaagtcttcaaaactctcagatgtcatgatggggtgtgcattggggcagcttggcatcccttggagcaaagtaaagttgcaacttgtggctgggatggcttgattaaatattgggactag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0071007 GO:0071013 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

WD40

Protein Analysis

574

Amino Acids

64.78

Weight (kDa)

6.4

Isoelectric Point (pI)

40.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004435)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10580
fragaria_vesca	FvH4_4g34510
malus_domestica	MD13G1091700.v1.1 MD16G1092300.v1.1
prunus_persica	Prupe.1G254100_v2.0.a1 Prupe.1G254100_v2.0.a1 Prupe.1G254100_v2.0.a1 Prupe.7G165100_v2.0.a1
pyrus_communis	pycom13g07960 pycom16g07870
rosa_chinensis	RchiOBHm_Chr4g0443891 RchiOBHm_Chr5g0051731 RchiOBHm_Chr5g0051741
rosa_laevigata	RLG00000005880 RLG00000006045
rosa_multiflora	Rmu_co8435535.1_g000001 Rmu_sc0010179.1_g000004 Rmu_sc0019062.1_g000007
rosa_roxburghii	Rroxscaffold_5G00384460
rosa_rugosa	Rorug04G0348100 Rorug05G0277100.1
rosa_samantha	Rh4AG408600 Rh4BG419700 Rh4CG433700 Rh4DG414700 Rh5AG349300 Rh5BG360800 Rh5BG360900 Rh5CG385500 Rh5DG375700
rosa_wichuraiana	Rw4G035090 Rw5G033000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1069
Acc16I	TGCGCA	1 cut(s)	272
Acc36I	ACCTGC	1 cut(s)	1069
AccB1I	GGYRCC	1 cut(s)	683
AccI	GTMKAC	2 cut(s)	102, 183
AccII	CGCG	3 cut(s)	67, 92, 560
AccIII	TCCGGA	1 cut(s)	1132
AclWI	GGATC	1 cut(s)	12
AcoI	YGGCCR	3 cut(s)	129, 408, 549
AcsI	RAATTY	2 cut(s)	880, 1528
AcyI	GRCGYC	3 cut(s)	300, 429, 516
AfaI	GTAC	2 cut(s)	335, 443
AfiI	CCNNNNNNNGG	8 cut(s)	127, 211, 224, 262, 535, 593, 883, 884
AflIII	ACRYGT	2 cut(s)	558, 1498
AgsI	TTSAA	3 cut(s)	190, 943, 1615
AjnI	CCWGG	2 cut(s)	96, 261
AjuI	GAANNNNNNNTTGG	2 cut(s)	1142, 1174
AluBI	AGCT	6 cut(s)	208, 283, 622, 1126, 1471, 1655
AluI	AGCT	6 cut(s)	208, 283, 622, 1126, 1471, 1655
Alw26I	GTCTC	2 cut(s)	738, 1311
AlwI	GGATC	1 cut(s)	12
Ama87I	CYCGRG	1 cut(s)	1558
Aor13HI	TCCGGA	1 cut(s)	1132
AoxI	GGCC	9 cut(s)	117, 129, 155, 213, 226, 253, 408, 549, 591
ApaI	GGGCCC	1 cut(s)	217
ApeKI	GCWGC	4 cut(s)	141, 172, 1415, 1652
ApoI	RAATTY	2 cut(s)	880, 1528
AspLEI	GCGC	3 cut(s)	94, 273, 772
AspS9I	GGNCC	7 cut(s)	118, 156, 213, 214, 227, 526, 591
AsuC2I	CCSGG	5 cut(s)	50, 154, 530, 548, 595
AsuHPI	GGTGA	9 cut(s)	227, 518, 683, 934, 1093, 1132, 1258, 1574, 1580
AsuII	TTCGAA	3 cut(s)	980, 1007, 1403
AvaI	CYCGRG	1 cut(s)	1558
AvaII	GGWCC	1 cut(s)	526
BaeGI	GKGCMC	1 cut(s)	217
BaeI	ACNNNNGTAYC	2 cut(s)	906, 939
BalI	TGGCCA	1 cut(s)	131
BanI	GGYRCC	1 cut(s)	683
BanII	GRGCYC	3 cut(s)	217, 315, 587
BarI	GAAGNNNNNNTAC	2 cut(s)	1270, 1302
BauI	CACGAG	1 cut(s)	458
BbsI	GAAGAC	4 cut(s)	519, 722, 1603, 1604
BbvI	GCAGC	4 cut(s)	153, 184, 1427, 1664
BceAI	ACGGC	6 cut(s)	241, 268, 370, 416, 745, 836
BciT130I	CCWGG	2 cut(s)	98, 263
BciVI	GTATCC	2 cut(s)	907, 1057
BclI	TGATCA	2 cut(s)	799, 1228
BcnI	CCSGG	5 cut(s)	50, 154, 530, 548, 595
BcoDI	GTCTC	2 cut(s)	738, 1311
BfaI	CTAG	3 cut(s)	284, 1455, 1723
BfmI	CTRYAG	1 cut(s)	903
BfuAI	ACCTGC	1 cut(s)	1069
BfuI	GTATCC	2 cut(s)	907, 1057
BglI	GCCNNNNNGGC	1 cut(s)	67
Bme1390I	CCNGG	7 cut(s)	50, 98, 154, 263, 530, 548, 595
Bme18I	GGWCC	1 cut(s)	526
BmeT110I	CYCGRG	1 cut(s)	1558
BmgT120I	GGNCC	7 cut(s)	118, 156, 213, 214, 227, 526, 591
BmiI	GGNNCC	6 cut(s)	71, 215, 216, 528, 685, 1110
BmrFI	CCNGG	7 cut(s)	50, 98, 154, 263, 530, 548, 595
BmrI	ACTGGG	2 cut(s)	1083, 1110
BmsI	GCATC	3 cut(s)	772, 1568, 1669
BmuI	ACTGGG	2 cut(s)	1083, 1110
BpiI	GAAGAC	4 cut(s)	519, 722, 1603, 1604
Bpu14I	TTCGAA	3 cut(s)	980, 1007, 1403
BpuEI	CTTGAG	1 cut(s)	1203
BpuMI	CCSGG	5 cut(s)	50, 154, 530, 548, 595
BsaBI	GATNNNNATC	1 cut(s)	1272
BsaHI	GRCGYC	3 cut(s)	300, 429, 516
BsaWI	WCCGGW	1 cut(s)	1132
BsaXI	ACNNNNNCTCC	2 cut(s)	690, 720
Bsc4I	CCNNNNNNNGG	8 cut(s)	127, 211, 224, 262, 535, 593, 883, 884
Bse118I	RCCGGY	3 cut(s)	383, 613, 686
Bse1I	ACTGG	4 cut(s)	952, 1078, 1105, 1293
Bse8I	GATNNNNATC	1 cut(s)	1272
BseAI	TCCGGA	1 cut(s)	1132
BseBI	CCWGG	2 cut(s)	98, 263
BseGI	GGATG	7 cut(s)	447, 508, 940, 1141, 1173, 1660, 1705
BseJI	GATNNNNATC	1 cut(s)	1272
BseLI	CCNNNNNNNGG	8 cut(s)	127, 211, 224, 262, 535, 593, 883, 884
BseMII	CTCAG	1 cut(s)	1636
BseNI	ACTGG	4 cut(s)	952, 1078, 1105, 1293
BseRI	GAGGAG	3 cut(s)	62, 548, 644
BseSI	GKGCMC	1 cut(s)	217
BseXI	GCAGC	4 cut(s)	153, 184, 1427, 1664
BseYI	CCCAGC	3 cut(s)	453, 1163, 1695
Bsh1236I	CGCG	3 cut(s)	67, 92, 560
BshFI	GGCC	9 cut(s)	119, 131, 157, 215, 228, 255, 410, 551, 593
BshNI	GGYRCC	1 cut(s)	683
BsiHKCI	CYCGRG	1 cut(s)	1558
BsiSI	CCGG	9 cut(s)	50, 154, 384, 530, 548, 594, 614, 687, 1133
BslFI	GGGAC	1 cut(s)	136
BslI	CCNNNNNNNGG	8 cut(s)	127, 211, 224, 262, 535, 593, 883, 884
BsmAI	GTCTC	2 cut(s)	738, 1311
BsmFI	GGGAC	1 cut(s)	136
BsmI	GAATGC	2 cut(s)	976, 1369
BsnI	GGCC	9 cut(s)	119, 131, 157, 215, 228, 255, 410, 551, 593
BsoBI	CYCGRG	1 cut(s)	1558
Bsp119I	TTCGAA	3 cut(s)	980, 1007, 1403
Bsp120I	GGGCCC	1 cut(s)	213
Bsp1286I	GDGCHC	3 cut(s)	217, 315, 587
Bsp13I	TCCGGA	1 cut(s)	1132
Bsp1407I	TGTACA	1 cut(s)	441
Bsp143I	GATC	4 cut(s)	4, 799, 1212, 1228
Bsp19I	CCATGG	1 cut(s)	587
BspANI	GGCC	9 cut(s)	119, 131, 157, 215, 228, 255, 410, 551, 593
BspCNI	CTCAG	1 cut(s)	1635
BspEI	TCCGGA	1 cut(s)	1132
BspFNI	CGCG	3 cut(s)	67, 92, 560
BspHI	TCATGA	1 cut(s)	1630
BspLI	GGNNCC	6 cut(s)	71, 215, 216, 528, 685, 1110
BspMAI	CTGCAG	1 cut(s)	907
BspMI	ACCTGC	1 cut(s)	1069
BspPI	GGATC	1 cut(s)	12
BspQI	GCTCTTC	1 cut(s)	575
BspT104I	TTCGAA	3 cut(s)	980, 1007, 1403
BspT107I	GGYRCC	1 cut(s)	683
BsrFI	RCCGGY	3 cut(s)	383, 613, 686
BsrGI	TGTACA	1 cut(s)	441
BsrI	ACTGG	4 cut(s)	952, 1078, 1105, 1293
BssAI	RCCGGY	3 cut(s)	383, 613, 686
BssMI	GATC	4 cut(s)	4, 799, 1212, 1228
BssNI	GRCGYC	3 cut(s)	300, 429, 516
BssSI	CACGAG	1 cut(s)	458
BssT1I	CCWWGG	5 cut(s)	246, 587, 786, 849, 1665
Bst2BI	CACGAG	1 cut(s)	458
Bst2UI	CCWGG	2 cut(s)	98, 263
Bst4CI	ACNGT	2 cut(s)	806, 1548
Bst6I	CTCTTC	6 cut(s)	479, 575, 669, 732, 1314, 1478
BstACI	GRCGYC	3 cut(s)	300, 429, 516
BstAPI	GCANNNNNTGC	1 cut(s)	1375
BstAUI	TGTACA	1 cut(s)	441
BstBI	TTCGAA	3 cut(s)	980, 1007, 1403
BstC8I	GCNNGC	9 cut(s)	117, 269, 385, 553, 615, 688, 1358, 1413, 1519
BstDEI	CTNAG	2 cut(s)	918, 1622
BstDSI	CCRYGG	3 cut(s)	65, 587, 727
BstENI	CCTNNNNNAGG	1 cut(s)	260
BstF5I	GGATG	7 cut(s)	447, 508, 940, 1141, 1173, 1660, 1705
BstFNI	CGCG	3 cut(s)	67, 92, 560
BstHHI	GCGC	3 cut(s)	94, 273, 772
BstKTI	GATC	4 cut(s)	7, 802, 1215, 1231
BstMAI	GTCTC	2 cut(s)	738, 1311
BstMBI	GATC	4 cut(s)	4, 799, 1212, 1228
BstMWI	GCNNNNNNNGC	9 cut(s)	67, 469, 548, 557, 619, 1366, 1375, 1514, 1701
BstNI	CCWGG	2 cut(s)	98, 263
BstNSI	RCATGY	3 cut(s)	271, 1369, 1502
BstSCI	CCNGG	7 cut(s)	48, 96, 152, 261, 528, 546, 593
BstSFI	CTRYAG	1 cut(s)	903
BstSLI	GKGCMC	1 cut(s)	217
BstUI	CGCG	3 cut(s)	67, 92, 560
BstV1I	GCAGC	4 cut(s)	153, 184, 1427, 1664
BstV2I	GAAGAC	4 cut(s)	519, 722, 1603, 1604
BstX2I	RGATCY	1 cut(s)	4
BstYI	RGATCY	1 cut(s)	4
BsuI	GTATCC	2 cut(s)	907, 1057
BsuRI	GGCC	9 cut(s)	119, 131, 157, 215, 228, 255, 410, 551, 593
BtgI	CCRYGG	3 cut(s)	65, 587, 727
BtsCI	GGATG	7 cut(s)	447, 508, 940, 1141, 1173, 1660, 1705
BtsIMutI	CAGTG	4 cut(s)	802, 945, 1196, 1300
BveI	ACCTGC	1 cut(s)	1069
Cac8I	GCNNGC	9 cut(s)	117, 269, 385, 553, 615, 688, 1358, 1413, 1519
CciI	TCATGA	1 cut(s)	1630
CfoI	GCGC	3 cut(s)	94, 273, 772
Cfr10I	RCCGGY	3 cut(s)	383, 613, 686
Cfr13I	GGNCC	7 cut(s)	118, 156, 213, 214, 227, 526, 591
Cfr42I	CCGCGG	1 cut(s)	68
CseI	GACGC	5 cut(s)	178, 308, 437, 524, 566
Csp6I	GTAC	2 cut(s)	334, 442
CviAII	CATG	7 cut(s)	112, 268, 588, 970, 1366, 1499, 1631
CviQI	GTAC	2 cut(s)	334, 442
DdeI	CTNAG	2 cut(s)	918, 1622
DpnI	GATC	4 cut(s)	6, 801, 1214, 1230
DpnII	GATC	4 cut(s)	4, 799, 1212, 1228
EaeI	YGGCCR	3 cut(s)	129, 408, 549
Eam1104I	CTCTTC	6 cut(s)	479, 575, 669, 732, 1314, 1478
EarI	CTCTTC	6 cut(s)	479, 575, 669, 732, 1314, 1478
EciI	GGCGGA	4 cut(s)	76, 364, 370, 632
Eco130I	CCWWGG	5 cut(s)	246, 587, 786, 849, 1665
Eco24I	GRGCYC	3 cut(s)	217, 315, 587
Eco32I	GATATC	1 cut(s)	1086
Eco47I	GGWCC	1 cut(s)	526
Eco88I	CYCGRG	1 cut(s)	1558
EcoNI	CCTNNNNNAGG	1 cut(s)	260
EcoO109I	RGGNCCY	1 cut(s)	214
EcoRI	GAATTC	1 cut(s)	880
EcoRII	CCWGG	2 cut(s)	96, 261
EcoRV	GATATC	1 cut(s)	1086
EcoT14I	CCWWGG	5 cut(s)	246, 587, 786, 849, 1665
EcoT22I	ATGCAT	1 cut(s)	1371
EcoT38I	GRGCYC	3 cut(s)	217, 315, 587
ErhI	CCWWGG	5 cut(s)	246, 587, 786, 849, 1665
FaeI	CATG	7 cut(s)	115, 271, 591, 973, 1369, 1502, 1634
FaqI	GGGAC	1 cut(s)	136
FatI	CATG	7 cut(s)	111, 267, 587, 969, 1365, 1498, 1630
FauI	CCCGC	1 cut(s)	1501
FbaI	TGATCA	2 cut(s)	799, 1228
FblI	GTMKAC	2 cut(s)	102, 183
FokI	GGATG	7 cut(s)	434, 515, 947, 1148, 1180, 1647, 1712
FriOI	GRGCYC	3 cut(s)	217, 315, 587
FspBI	CTAG	3 cut(s)	284, 1455, 1723
FspI	TGCGCA	1 cut(s)	272
GlaI	GCGC	3 cut(s)	93, 272, 771
GsaI	CCCAGC	3 cut(s)	457, 1167, 1699
HaeIII	GGCC	9 cut(s)	119, 131, 157, 215, 228, 255, 410, 551, 593
HapII	CCGG	9 cut(s)	50, 154, 384, 530, 548, 594, 614, 687, 1133
HgaI	GACGC	5 cut(s)	178, 308, 437, 524, 566
HhaI	GCGC	3 cut(s)	94, 273, 772
Hin1I	GRCGYC	3 cut(s)	300, 429, 516
Hin1II	CATG	7 cut(s)	115, 271, 591, 973, 1369, 1502, 1634
Hin6I	GCGC	3 cut(s)	92, 271, 770
HinP1I	GCGC	3 cut(s)	92, 271, 770
HincII	GTYRAC	2 cut(s)	103, 184
HindII	GTYRAC	2 cut(s)	103, 184
HindIII	AAGCTT	1 cut(s)	1124
HinfI	GANTC	4 cut(s)	53, 895, 1330, 1438
HpaII	CCGG	9 cut(s)	50, 154, 384, 530, 548, 594, 614, 687, 1133
HphI	GGTGA	9 cut(s)	227, 518, 683, 934, 1093, 1132, 1258, 1574, 1580
Hpy166II	GTNNAC	3 cut(s)	103, 184, 442
Hpy188I	TCNGA	3 cut(s)	25, 816, 1625
Hpy188III	TCNNGA	5 cut(s)	346, 877, 1133, 1220, 1631
Hpy8I	GTNNAC	3 cut(s)	103, 184, 442
Hpy99I	CGWCG	9 cut(s)	29, 107, 172, 185, 296, 329, 401, 431, 560
HpyAV	CCTTC	8 cut(s)	325, 484, 595, 750, 976, 1099, 1272, 1565
HpyCH4III	ACNGT	2 cut(s)	806, 1548
HpyCH4IV	ACGT	1 cut(s)	396
HpyF10VI	GCNNNNNNNGC	9 cut(s)	67, 469, 548, 557, 619, 1366, 1375, 1514, 1701
HpyF3I	CTNAG	2 cut(s)	918, 1622
HpySE526I	ACGT	1 cut(s)	396
Hsp92I	GRCGYC	3 cut(s)	300, 429, 516
Hsp92II	CATG	7 cut(s)	115, 271, 591, 973, 1369, 1502, 1634
HspAI	GCGC	3 cut(s)	92, 271, 770
Kpn2I	TCCGGA	1 cut(s)	1132
KroI	GCCGGC	3 cut(s)	383, 613, 686
KroNI	GCCGGC	3 cut(s)	385, 615, 688
Ksp22I	TGATCA	2 cut(s)	799, 1228
KspI	CCGCGG	1 cut(s)	68
Kzo9I	GATC	4 cut(s)	4, 799, 1212, 1228
LguI	GCTCTTC	1 cut(s)	575
LmnI	GCTCC	4 cut(s)	75, 619, 631, 1669
Lsp1109I	GCAGC	4 cut(s)	153, 184, 1427, 1664
LweI	GCATC	3 cut(s)	772, 1568, 1669
MaeI	CTAG	3 cut(s)	284, 1455, 1723
MaeII	ACGT	1 cut(s)	396
MaeIII	GTNAC	3 cut(s)	806, 842, 1285
MalI	GATC	4 cut(s)	6, 801, 1214, 1230
MboI	GATC	4 cut(s)	4, 799, 1212, 1228
MflI	RGATCY	1 cut(s)	4
MhlI	GDGCHC	3 cut(s)	217, 315, 587
MlsI	TGGCCA	1 cut(s)	131
MluCI	AATT	7 cut(s)	40, 391, 880, 1383, 1399, 1405, 1528
MluI	ACGCGT	1 cut(s)	558
MluNI	TGGCCA	1 cut(s)	131
MmeI	TCCRAC	1 cut(s)	48
Mox20I	TGGCCA	1 cut(s)	131
Mph1103I	ATGCAT	1 cut(s)	1371
MroI	TCCGGA	1 cut(s)	1132
MroNI	GCCGGC	3 cut(s)	383, 613, 686
MscI	TGGCCA	1 cut(s)	131
MseI	TTAA	2 cut(s)	1128, 1710
MslI	CAYNNNNRTG	1 cut(s)	1239
Msp20I	TGGCCA	1 cut(s)	131
MspA1I	CMGCKG	1 cut(s)	67
MspI	CCGG	9 cut(s)	50, 154, 384, 530, 548, 594, 614, 687, 1133
MspR9I	CCNGG	7 cut(s)	50, 98, 154, 263, 530, 548, 595
Mva1269I	GAATGC	2 cut(s)	976, 1369
MvaI	CCWGG	2 cut(s)	98, 263
MvnI	CGCG	3 cut(s)	67, 92, 560
MwoI	GCNNNNNNNGC	9 cut(s)	67, 469, 548, 557, 619, 1366, 1375, 1514, 1701
NaeI	GCCGGC	3 cut(s)	385, 615, 688
NciI	CCSGG	5 cut(s)	50, 154, 530, 548, 595
NcoI	CCATGG	1 cut(s)	587
NdeII	GATC	4 cut(s)	4, 799, 1212, 1228
NgoMIV	GCCGGC	3 cut(s)	383, 613, 686
NlaIII	CATG	7 cut(s)	115, 271, 591, 973, 1369, 1502, 1634
NlaIV	GGNNCC	6 cut(s)	71, 215, 216, 528, 685, 1110
NmeAIII	GCCGAG	2 cut(s)	544, 801
NmuCI	GTSAC	1 cut(s)	842
NsbI	TGCGCA	1 cut(s)	272
NsiI	ATGCAT	1 cut(s)	1371
NspI	RCATGY	3 cut(s)	271, 1369, 1502
NspV	TTCGAA	3 cut(s)	980, 1007, 1403
PaeI	GCATGC	1 cut(s)	271
PagI	TCATGA	1 cut(s)	1630
PaqCI	CACCTGC	1 cut(s)	1069
PasI	CCCWGGG	1 cut(s)	262
PciI	ACATGT	1 cut(s)	1498
PciSI	GCTCTTC	1 cut(s)	575
PcsI	WCGNNNNNNNCGW	1 cut(s)	306
PctI	GAATGC	2 cut(s)	976, 1369
PdiI	GCCGGC	3 cut(s)	385, 615, 688
PfeI	GAWTC	4 cut(s)	53, 895, 1330, 1438
PscI	ACATGT	1 cut(s)	1498
Psp6I	CCWGG	2 cut(s)	96, 261
PspFI	CCCAGC	3 cut(s)	453, 1163, 1695
PspGI	CCWGG	2 cut(s)	96, 261
PspN4I	GGNNCC	6 cut(s)	71, 215, 216, 528, 685, 1110
PspOMI	GGGCCC	1 cut(s)	213
PspPI	GGNCC	7 cut(s)	118, 156, 213, 214, 227, 526, 591
PsrI	GAACNNNNNNTAC	2 cut(s)	341, 373
PstI	CTGCAG	1 cut(s)	907
PsuI	RGATCY	1 cut(s)	4
RsaI	GTAC	2 cut(s)	335, 443
RsaNI	GTAC	2 cut(s)	334, 442
RseI	CAYNNNNRTG	1 cut(s)	1239
SacII	CCGCGG	1 cut(s)	68
SalI	GTCGAC	2 cut(s)	101, 182
SapI	GCTCTTC	1 cut(s)	575
SaqAI	TTAA	2 cut(s)	1128, 1710
Sau3AI	GATC	4 cut(s)	4, 799, 1212, 1228
Sau96I	GGNCC	7 cut(s)	118, 156, 213, 214, 227, 526, 591
ScrFI	CCNGG	7 cut(s)	50, 98, 154, 263, 530, 548, 595
SduI	GDGCHC	3 cut(s)	217, 315, 587
SfaNI	GCATC	3 cut(s)	772, 1568, 1669
SfcI	CTRYAG	1 cut(s)	903
Sfr303I	CCGCGG	1 cut(s)	68
SfuI	TTCGAA	3 cut(s)	980, 1007, 1403
SgrBI	CCGCGG	1 cut(s)	68
SinI	GGWCC	1 cut(s)	526
SmiMI	CAYNNNNRTG	1 cut(s)	1239
SmlI	CTYRAG	1 cut(s)	1218
SmoI	CTYRAG	1 cut(s)	1218
SphI	GCATGC	1 cut(s)	271
Sse9I	AATT	7 cut(s)	40, 391, 880, 1383, 1399, 1405, 1528
SspI	AATATT	1 cut(s)	1715
SspMI	CTAG	3 cut(s)	284, 1455, 1723
StyD4I	CCNGG	7 cut(s)	48, 96, 152, 261, 528, 546, 593
StyI	CCWWGG	5 cut(s)	246, 587, 786, 849, 1665
TaaI	ACNGT	2 cut(s)	806, 1548
TaiI	ACGT	1 cut(s)	399
TasI	AATT	7 cut(s)	40, 391, 880, 1383, 1399, 1405, 1528
TatI	WGTACW	2 cut(s)	333, 441
TauI	GCSGC	6 cut(s)	70, 92, 305, 365, 413, 775
TfiI	GAWTC	4 cut(s)	53, 895, 1330, 1438
Tru1I	TTAA	2 cut(s)	1128, 1710
Tru9I	TTAA	2 cut(s)	1128, 1710
TscAI	CASTG	4 cut(s)	809, 952, 1196, 1300
TseFI	GTSAC	1 cut(s)	842
TseI	GCWGC	4 cut(s)	141, 172, 1415, 1652
Tsp45I	GTSAC	1 cut(s)	842
TspDTI	ATGAA	3 cut(s)	307, 584, 1214
TspGWI	ACGGA	2 cut(s)	641, 1082
TspRI	CASTG	4 cut(s)	809, 952, 1196, 1300
VpaK11BI	GGWCC	1 cut(s)	526
XagI	CCTNNNNNAGG	1 cut(s)	260
XapI	RAATTY	2 cut(s)	880, 1528
XceI	RCATGY	3 cut(s)	271, 1369, 1502
XmiI	GTMKAC	2 cut(s)	102, 183
XspI	CTAG	3 cut(s)	284, 1455, 1723
Zsp2I	ATGCAT	1 cut(s)	1371

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.