Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0004435

Physical Location & Seq

Genomic Coordinates Reverse (-)

5277352 .. 5279954

Gene Structure 2603 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g07960.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1827 bp

ATGGATCTTCTCCGAGCATACTCTGATCAAAACGACGACGAATCGAACGAGCCAGAGGAGCACAACCAAAACCCTAAATCCGCACCGTCGTCCCCAGACGCGTCGCCGCCTCGGCTCCTCCCCGCCAAGTCCGCGGCGCCCAATGTCGACGACACTATGCTGGCCCTGGCGGTAGCCGGGGCCAACCGGTCTTCCACCCGCCCCATCGACCCGACCCAACACATCGTCGGTTTCAACCCCACGTACGACCAGCTATGGGCGCCCATCTATGGCCCATCCCACCCGTACGCCAAGGACGGCATCGCCCAGGGGATGCGCAACCACAAGCTCGGCTTCGTGGAGGACGCATCAATTGAGCCCTTCGTGTTCGACGAGCAGTACAACACTTTTCACAAGTATGGGTATGCTGCTGATCCATCGGCCTCTGCTGGGTACAATTATGTTGGAGATTTCGAGGCCTTGCAGAAGAACGACGCCGTTTCTGTGTATAACATTCCCCAGCACGAGCAGAAGAAGCGGAAGATTGAAAAGAGGAAGGAATTGGACGAGAATGAGGGTGAGGATGAAGATATGGACCCCGAGGAGGTCCAGAACCCGGCTAGTGACGTGTGGTTGATGAAGAATAAGAAGAGTCCGTGGGCGGGAAAGAAGGAGGGTCTGCCAACGGAGCTGACTGAGGAGCAGAAGAAGTATGCAGAGGAGTATGCCAAGAAGAAAGGCGAAGAGAAAGGGGCTGGCGATAAGGGTGAGGCTGTGGTTGAGAAGACTACGTTTCATGGGAAGGAAGAGAGGGATTATCAGGGTAGGTCTTGGATTGCACCGCCGAGAGATGCTAAGGCATCTAATGATCACTGTTATATTCCGAAGAGGTTGGTGCACACTTGGAGCGGGCACACGAAGGGTGTGTCTGCTATTAGGTTCTTCCCTAAGTACGGGCATTTGATTCTCTCTGCCGGGATGGATACCAAGGTGAAGATTTGGGATGTTTTCAATACCGGAAAGTGTATGAGAACTTACATGGGTCACTCTAAGGCAGTTCGGGATATTTGTTTCTCTAATGATGGGAGTAGGTTTTTGACTGCTAGTTATGATAAGAATATCAAGTACTGGGATACTGAAACTGGGCAGGTGATATCTACATTCTCAACCGGGAAGGTTCCTTATGTTGTCAAGCTGAATCCAGACGAGGATAAGCAGAATGTATTGTTGGCAGGTATGAGTGATAAGAAGATTGTTCAGTGGGATATGAATGAGGGGAAGATAAATCAAGAATATGATCATCATTTGGGTGCTGTGAATACGATTACGTTTGTGGATAATAACCGTAGGTTTGTTACTTCCAGCGATGACAAGTCACTTCGCGTATGGGAGTTTGGGATCCCTGTGGTTATTAAGTATATTAGTGAGCCTCATATGCATTCTATGCCATCAATTTCACTGCACCCCAATTCCAATTGGCTTGCAGCACAGAGTATGGACAATCAGATTCTGATTTATAGCACTAGGGAGAAGTTTCAGCTCAATAAGAAGAAGAGGTTTGCCGGGCATGTCGTCGCTGGGTATGCTTGCCAAGTCAATTTTTCGCCAGACGGACGGTTTGTTATGTCGGGTGATGGTGAAGGTAGATGCTGGTTTTGGGATTGGAAGACATGCAAAGTCTTCAGAACTCTCAAATGTCATGAAGGGGTATGCATTGGGGCTGCATGGCATCCCTTGGAGCAAAGTAAAGTTGCAACATGTGGCTGGGATGGCTTGATTAAGTACTGGATATCAAACTTAACCTTGTTCACATCTAGGACTAGCTGCATTCCACTTCGGTTTGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0071007 GO:0071013 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

WD40

Protein Analysis

609

Amino Acids

68.83

Weight (kDa)

6.48

Isoelectric Point (pI)

42.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004435)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10580
fragaria_vesca	FvH4_4g34510
malus_domestica	MD13G1091700.v1.1 MD16G1092300.v1.1
prunus_persica	Prupe.1G254100_v2.0.a1 Prupe.1G254100_v2.0.a1 Prupe.1G254100_v2.0.a1 Prupe.7G165100_v2.0.a1
pyrus_communis	pycom13g07960 pycom16g07870
rosa_chinensis	RchiOBHm_Chr4g0443891 RchiOBHm_Chr5g0051731 RchiOBHm_Chr5g0051741
rosa_laevigata	RLG00000005880 RLG00000006045
rosa_multiflora	Rmu_co8435535.1_g000001 Rmu_sc0010179.1_g000004 Rmu_sc0019062.1_g000007
rosa_roxburghii	Rroxscaffold_5G00384460
rosa_rugosa	Rorug04G0348100 Rorug05G0277100.1
rosa_samantha	Rh4AG408600 Rh4BG419700 Rh4CG433700 Rh4DG414700 Rh5AG349300 Rh5BG360800 Rh5BG360900 Rh5CG385500 Rh5DG375700
rosa_wichuraiana	Rw4G035090 Rw5G033000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1117
Acc16I	TGCGCA	1 cut(s)	317
Acc36I	ACCTGC	2 cut(s)	1117, 1202
AccB1I	GGYRCC	2 cut(s)	136, 259
AccBSI	CCGCTC	1 cut(s)	888
AccI	GTMKAC	1 cut(s)	147
AccII	CGCG	3 cut(s)	101, 134, 1362
AclWI	GGATC	4 cut(s)	12, 407, 1372, 1385
AcuI	CTGAAG	1 cut(s)	1645
AcyI	GRCGYC	3 cut(s)	137, 260, 474
AfaI	GTAC	7 cut(s)	245, 287, 380, 434, 932, 1106, 1763
AfiI	CCNNNNNNNGG	7 cut(s)	256, 269, 429, 583, 595, 641, 932
AflIII	ACRYGT	3 cut(s)	99, 606, 1736
AgeI	ACCGGT	1 cut(s)	186
AgsI	TTSAA	3 cut(s)	235, 527, 991
AjiI	CACGTC	1 cut(s)	607
AjnI	CCWGG	2 cut(s)	165, 306
AjuI	GAANNNNNNNTTGG	2 cut(s)	1190, 1222
AluBI	AGCT	6 cut(s)	253, 328, 670, 1174, 1519, 1803
AluI	AGCT	6 cut(s)	253, 328, 670, 1174, 1519, 1803
Alw21I	GWGCWC	2 cut(s)	63, 879
Alw44I	GTGCAC	1 cut(s)	875
AlwI	GGATC	4 cut(s)	12, 407, 1372, 1385
AlwNI	CAGNNNCTG	1 cut(s)	1489
Ama87I	CYCGRG	1 cut(s)	578
AoxI	GGCC	5 cut(s)	162, 180, 271, 420, 456
ApaLI	GTGCAC	1 cut(s)	875
ApeKI	GCWGC	4 cut(s)	407, 1463, 1700, 1803
ArsI	GACNNNNNNTTYG	4 cut(s)	890, 922, 1580, 1612
AsiGI	ACCGGT	1 cut(s)	186
AspLEI	GCGC	3 cut(s)	139, 262, 318
AspS9I	GGNCC	5 cut(s)	163, 180, 272, 574, 586
AsuC2I	CCSGG	5 cut(s)	178, 596, 955, 1150, 1543
AsuHPI	GGTGA	6 cut(s)	569, 758, 982, 1141, 1622, 1628
AvaI	CYCGRG	1 cut(s)	578
AvaII	GGWCC	2 cut(s)	574, 586
BaeGI	GKGCMC	2 cut(s)	879, 894
BaeI	ACNNNNGTAYC	2 cut(s)	954, 987
BamHI	GGATCC	1 cut(s)	1377
BanI	GGYRCC	2 cut(s)	136, 259
BanII	GRGCYC	1 cut(s)	360
BauI	CACGAG	1 cut(s)	503
BbsI	GAAGAC	4 cut(s)	183, 770, 1651, 1652
Bbv12I	GWGCWC	2 cut(s)	63, 879
BbvI	GCAGC	4 cut(s)	394, 1475, 1687, 1790
BccI	CCATC	9 cut(s)	212, 272, 283, 424, 952, 1055, 1435, 1607, 1742
BceAI	ACGGC	2 cut(s)	313, 461
BciT130I	CCWGG	2 cut(s)	167, 308
BciVI	GTATCC	2 cut(s)	955, 1105
BclI	TGATCA	3 cut(s)	25, 847, 1276
BcnI	CCSGG	5 cut(s)	178, 596, 955, 1150, 1543
BfaI	CTAG	5 cut(s)	600, 1083, 1503, 1794, 1800
BfoI	RGCGCY	2 cut(s)	140, 263
BfuAI	ACCTGC	2 cut(s)	1117, 1202
BfuI	GTATCC	2 cut(s)	955, 1105
BglI	GCCNNNNNGGC	1 cut(s)	112
BisI	GCNGC	6 cut(s)	107, 135, 408, 1464, 1701, 1804
BlsI	GCNGC	6 cut(s)	108, 136, 409, 1465, 1702, 1805
BmcAI	AGTACT	2 cut(s)	1106, 1763
Bme1390I	CCNGG	7 cut(s)	167, 178, 308, 596, 955, 1150, 1543
Bme18I	GGWCC	2 cut(s)	574, 586
BmeT110I	CYCGRG	1 cut(s)	578
BmgBI	CACGTC	1 cut(s)	607
BmgT120I	GGNCC	5 cut(s)	163, 180, 272, 574, 586
BmiI	GGNNCC	7 cut(s)	116, 138, 181, 261, 576, 1158, 1379
BmrFI	CCNGG	7 cut(s)	167, 178, 308, 596, 955, 1150, 1543
BmrI	ACTGGG	2 cut(s)	1117, 1131
BmsI	GCATC	7 cut(s)	303, 309, 356, 820, 848, 1616, 1717
BmuI	ACTGGG	2 cut(s)	1117, 1131
BpiI	GAAGAC	4 cut(s)	183, 770, 1651, 1652
Bpu10I	CCTNAGC	1 cut(s)	834
BpuMI	CCSGG	5 cut(s)	178, 596, 955, 1150, 1543
BsaAI	YACGTR	1 cut(s)	243
BsaHI	GRCGYC	3 cut(s)	137, 260, 474
BsaWI	WCCGGW	2 cut(s)	186, 995
Bsc4I	CCNNNNNNNGG	7 cut(s)	256, 269, 429, 583, 595, 641, 932
Bse118I	RCCGGY	1 cut(s)	186
Bse1I	ACTGG	3 cut(s)	1112, 1126, 1769
BseBI	CCWGG	2 cut(s)	167, 308
BseGI	GGATG	7 cut(s)	275, 318, 568, 963, 988, 1708, 1753
BseLI	CCNNNNNNNGG	7 cut(s)	256, 269, 429, 583, 595, 641, 932
BseMII	CTCAG	1 cut(s)	666
BseNI	ACTGG	3 cut(s)	1112, 1126, 1769
BseRI	GAGGAG	5 cut(s)	71, 107, 596, 692, 713
BseSI	GKGCMC	2 cut(s)	879, 894
BseXI	GCAGC	4 cut(s)	394, 1475, 1687, 1790
BseYI	CCCAGC	4 cut(s)	428, 498, 1556, 1743
BsgI	GTGCAG	1 cut(s)	1424
Bsh1236I	CGCG	3 cut(s)	101, 134, 1362
BshFI	GGCC	5 cut(s)	164, 182, 273, 422, 458
BshNI	GGYRCC	2 cut(s)	136, 259
BshTI	ACCGGT	1 cut(s)	186
BsiHKAI	GWGCWC	2 cut(s)	63, 879
BsiHKCI	CYCGRG	1 cut(s)	578
BsiSI	CCGG	7 cut(s)	177, 187, 596, 954, 996, 1149, 1542
BsiWI	CGTACG	2 cut(s)	243, 285
BslFI	GGGAC	1 cut(s)	76
BslI	CCNNNNNNNGG	7 cut(s)	256, 269, 429, 583, 595, 641, 932
BsmFI	GGGAC	1 cut(s)	76
BsmI	GAATGC	2 cut(s)	1417, 1806
BsnI	GGCC	5 cut(s)	164, 182, 273, 422, 458
BsoBI	CYCGRG	1 cut(s)	578
Bsp1286I	GDGCHC	4 cut(s)	63, 360, 879, 894
Bsp143I	GATC	6 cut(s)	4, 25, 412, 847, 1276, 1377
BspANI	GGCC	5 cut(s)	164, 182, 273, 422, 458
BspCNI	CTCAG	1 cut(s)	667
BspFNI	CGCG	3 cut(s)	101, 134, 1362
BspHI	TCATGA	1 cut(s)	1678
BspLI	GGNNCC	7 cut(s)	116, 138, 181, 261, 576, 1158, 1379
BspMI	ACCTGC	2 cut(s)	1117, 1202
BspPI	GGATC	4 cut(s)	12, 407, 1372, 1385
BspT107I	GGYRCC	2 cut(s)	136, 259
BsrBI	CCGCTC	1 cut(s)	888
BsrFI	RCCGGY	1 cut(s)	186
BsrI	ACTGG	3 cut(s)	1112, 1126, 1769
BssAI	RCCGGY	1 cut(s)	186
BssMI	GATC	6 cut(s)	4, 25, 412, 847, 1276, 1377
BssNI	GRCGYC	3 cut(s)	137, 260, 474
BssSI	CACGAG	1 cut(s)	503
BssT1I	CCWWGG	3 cut(s)	291, 966, 1713
Bst2BI	CACGAG	1 cut(s)	503
Bst2UI	CCWGG	2 cut(s)	167, 308
Bst4CI	ACNGT	4 cut(s)	87, 854, 1325, 1596
Bst6I	CTCTTC	5 cut(s)	623, 717, 780, 860, 1526
BstACI	GRCGYC	3 cut(s)	137, 260, 474
BstAPI	GCANNNNNTGC	1 cut(s)	1423
BstBAI	YACGTR	1 cut(s)	243
BstC8I	GCNNGC	5 cut(s)	162, 736, 890, 1461, 1567
BstDEI	CTNAG	4 cut(s)	675, 834, 927, 1029
BstDSI	CCRYGG	2 cut(s)	132, 635
BstF5I	GGATG	7 cut(s)	275, 318, 568, 963, 988, 1708, 1753
BstFNI	CGCG	3 cut(s)	101, 134, 1362
BstH2I	RGCGCY	2 cut(s)	140, 263
BstHHI	GCGC	3 cut(s)	139, 262, 318
BstKTI	GATC	6 cut(s)	7, 28, 415, 850, 1279, 1380
BstMBI	GATC	6 cut(s)	4, 25, 412, 847, 1276, 1377
BstNI	CCWGG	2 cut(s)	167, 308
BstNSI	RCATGY	3 cut(s)	1550, 1653, 1740
BstSCI	CCNGG	7 cut(s)	165, 176, 306, 594, 953, 1148, 1541
BstSLI	GKGCMC	2 cut(s)	879, 894
BstUI	CGCG	3 cut(s)	101, 134, 1362
BstV1I	GCAGC	4 cut(s)	394, 1475, 1687, 1790
BstV2I	GAAGAC	4 cut(s)	183, 770, 1651, 1652
BstX2I	RGATCY	2 cut(s)	4, 1377
BstYI	RGATCY	2 cut(s)	4, 1377
BsuI	GTATCC	2 cut(s)	955, 1105
BsuRI	GGCC	5 cut(s)	164, 182, 273, 422, 458
BtgI	CCRYGG	2 cut(s)	132, 635
BtgZI	GCGATG	2 cut(s)	286, 1359
BtrI	CACGTC	1 cut(s)	607
BtsCI	GGATG	7 cut(s)	275, 318, 568, 963, 988, 1708, 1753
BtsI	GCAGTG	1 cut(s)	1436
BtsIMutI	CAGTG	3 cut(s)	850, 1244, 1436
BveI	ACCTGC	2 cut(s)	1117, 1202
Cac8I	GCNNGC	5 cut(s)	162, 736, 890, 1461, 1567
CaiI	CAGNNNCTG	1 cut(s)	1489
CciI	TCATGA	1 cut(s)	1678
CfoI	GCGC	3 cut(s)	139, 262, 318
Cfr10I	RCCGGY	1 cut(s)	186
Cfr13I	GGNCC	5 cut(s)	163, 180, 272, 574, 586
Cfr42I	CCGCGG	1 cut(s)	135
CseI	GACGC	4 cut(s)	90, 107, 353, 482
Csp6I	GTAC	7 cut(s)	244, 286, 379, 433, 931, 1105, 1762
CspAI	ACCGGT	1 cut(s)	186
CviAII	CATG	7 cut(s)	776, 1018, 1547, 1650, 1679, 1704, 1737
CviQI	GTAC	7 cut(s)	244, 286, 379, 433, 931, 1105, 1762
DdeI	CTNAG	4 cut(s)	675, 834, 927, 1029
DinI	GGCGCC	2 cut(s)	138, 261
DpnI	GATC	6 cut(s)	6, 27, 414, 849, 1278, 1379
DpnII	GATC	6 cut(s)	4, 25, 412, 847, 1276, 1377
Eam1104I	CTCTTC	5 cut(s)	623, 717, 780, 860, 1526
EarI	CTCTTC	5 cut(s)	623, 717, 780, 860, 1526
Eco130I	CCWWGG	3 cut(s)	291, 966, 1713
Eco147I	AGGCCT	1 cut(s)	458
Eco24I	GRGCYC	1 cut(s)	360
Eco32I	GATATC	2 cut(s)	1134, 1770
Eco47I	GGWCC	2 cut(s)	574, 586
Eco57I	CTGAAG	1 cut(s)	1645
Eco88I	CYCGRG	1 cut(s)	578
EcoRII	CCWGG	2 cut(s)	165, 306
EcoRV	GATATC	2 cut(s)	1134, 1770
EcoT14I	CCWWGG	3 cut(s)	291, 966, 1713
EcoT22I	ATGCAT	2 cut(s)	1419, 1694
EcoT38I	GRGCYC	1 cut(s)	360
EgeI	GGCGCC	2 cut(s)	138, 261
EheI	GGCGCC	2 cut(s)	138, 261
ErhI	CCWWGG	3 cut(s)	291, 966, 1713
FaeI	CATG	7 cut(s)	779, 1021, 1550, 1653, 1682, 1707, 1740
FalI	AAGNNNNNCTT	2 cut(s)	317, 349
FaqI	GGGAC	1 cut(s)	76
FatI	CATG	7 cut(s)	775, 1017, 1546, 1649, 1678, 1703, 1736
FauI	CCCGC	4 cut(s)	130, 206, 634, 881
FauNDI	CATATG	1 cut(s)	1413
FbaI	TGATCA	3 cut(s)	25, 847, 1276
FblI	GTMKAC	1 cut(s)	147
Fnu4HI	GCNGC	6 cut(s)	107, 135, 408, 1464, 1701, 1804
FokI	GGATG	7 cut(s)	262, 325, 575, 970, 995, 1695, 1760
FriOI	GRGCYC	1 cut(s)	360
Fsp4HI	GCNGC	6 cut(s)	107, 135, 408, 1464, 1701, 1804
FspBI	CTAG	5 cut(s)	600, 1083, 1503, 1794, 1800
FspI	TGCGCA	1 cut(s)	317
GlaI	GCGC	3 cut(s)	138, 261, 317
GluI	GCNGC	6 cut(s)	107, 135, 408, 1464, 1701, 1804
GsaI	CCCAGC	4 cut(s)	432, 502, 1560, 1747
HaeII	RGCGCY	2 cut(s)	140, 263
HaeIII	GGCC	5 cut(s)	164, 182, 273, 422, 458
HapII	CCGG	7 cut(s)	177, 187, 596, 954, 996, 1149, 1542
HgaI	GACGC	4 cut(s)	90, 107, 353, 482
HhaI	GCGC	3 cut(s)	139, 262, 318
Hin1I	GRCGYC	3 cut(s)	137, 260, 474
Hin1II	CATG	7 cut(s)	779, 1021, 1550, 1653, 1682, 1707, 1740
Hin6I	GCGC	3 cut(s)	137, 260, 316
HinP1I	GCGC	3 cut(s)	137, 260, 316
HincII	GTYRAC	1 cut(s)	148
HindII	GTYRAC	1 cut(s)	148
HinfI	GANTC	5 cut(s)	41, 631, 943, 1177, 1486
HpaII	CCGG	7 cut(s)	177, 187, 596, 954, 996, 1149, 1542
HphI	GGTGA	6 cut(s)	569, 758, 982, 1141, 1622, 1628
Hpy166II	GTNNAC	3 cut(s)	148, 877, 1788
Hpy188I	TCNGA	6 cut(s)	14, 25, 864, 1485, 1491, 1664
Hpy188III	TCNNGA	5 cut(s)	589, 1040, 1181, 1268, 1679
Hpy8I	GTNNAC	3 cut(s)	148, 877, 1788
Hpy99I	CGWCG	9 cut(s)	38, 41, 91, 106, 152, 230, 374, 476, 1556
HpyAV	CCTTC	8 cut(s)	370, 529, 643, 775, 892, 1147, 1613, 1676
HpyCH4III	ACNGT	4 cut(s)	87, 854, 1325, 1596
HpyCH4IV	ACGT	4 cut(s)	242, 606, 770, 1307
HpyF3I	CTNAG	4 cut(s)	675, 834, 927, 1029
HpySE526I	ACGT	4 cut(s)	242, 606, 770, 1307
Hsp92I	GRCGYC	3 cut(s)	137, 260, 474
Hsp92II	CATG	7 cut(s)	779, 1021, 1550, 1653, 1682, 1707, 1740
HspAI	GCGC	3 cut(s)	137, 260, 316
KasI	GGCGCC	2 cut(s)	136, 259
Ksp22I	TGATCA	3 cut(s)	25, 847, 1276
KspI	CCGCGG	1 cut(s)	135
Kzo9I	GATC	6 cut(s)	4, 25, 412, 847, 1276, 1377
LmnI	GCTCC	6 cut(s)	58, 120, 667, 679, 885, 1717
Lsp1109I	GCAGC	4 cut(s)	394, 1475, 1687, 1790
LweI	GCATC	7 cut(s)	303, 309, 356, 820, 848, 1616, 1717
MaeI	CTAG	5 cut(s)	600, 1083, 1503, 1794, 1800
MaeII	ACGT	4 cut(s)	242, 606, 770, 1307
MaeIII	GTNAC	4 cut(s)	602, 1022, 1333, 1353
MalI	GATC	6 cut(s)	6, 27, 414, 849, 1278, 1379
MbiI	CCGCTC	1 cut(s)	888
MboI	GATC	6 cut(s)	4, 25, 412, 847, 1276, 1377
MfeI	CAATTG	2 cut(s)	351, 1453
MflI	RGATCY	2 cut(s)	4, 1377
MhlI	GDGCHC	4 cut(s)	63, 360, 879, 894
MluCI	AATT	7 cut(s)	351, 436, 539, 1431, 1447, 1453, 1576
MluI	ACGCGT	1 cut(s)	99
Mly113I	GGCGCC	2 cut(s)	137, 260
MlyI	GAGTC	1 cut(s)	640
MmeI	TCCRAC	1 cut(s)	424
Mph1103I	ATGCAT	2 cut(s)	1419, 1694
MseI	TTAA	3 cut(s)	1392, 1758, 1778
MslI	CAYNNNNRTG	2 cut(s)	396, 1287
MspA1I	CMGCKG	1 cut(s)	134
MspI	CCGG	7 cut(s)	177, 187, 596, 954, 996, 1149, 1542
MspR9I	CCNGG	7 cut(s)	167, 178, 308, 596, 955, 1150, 1543
MunI	CAATTG	2 cut(s)	351, 1453
Mva1269I	GAATGC	2 cut(s)	1417, 1806
MvaI	CCWGG	2 cut(s)	167, 308
MvnI	CGCG	3 cut(s)	101, 134, 1362
NarI	GGCGCC	2 cut(s)	137, 260
NciI	CCSGG	5 cut(s)	178, 596, 955, 1150, 1543
NdeI	CATATG	1 cut(s)	1413
NdeII	GATC	6 cut(s)	4, 25, 412, 847, 1276, 1377
NlaIII	CATG	7 cut(s)	779, 1021, 1550, 1653, 1682, 1707, 1740
NlaIV	GGNNCC	7 cut(s)	116, 138, 181, 261, 576, 1158, 1379
NmeAIII	GCCGAG	3 cut(s)	91, 309, 849
NmuCI	GTSAC	3 cut(s)	602, 1022, 1353
NsbI	TGCGCA	1 cut(s)	317
NsiI	ATGCAT	2 cut(s)	1419, 1694
NspI	RCATGY	3 cut(s)	1550, 1653, 1740
PagI	TCATGA	1 cut(s)	1678
PaqCI	CACCTGC	1 cut(s)	1117
PasI	CCCWGGG	1 cut(s)	307
PceI	AGGCCT	1 cut(s)	458
PciI	ACATGT	1 cut(s)	1736
PcsI	WCGNNNNNNNCGW	2 cut(s)	45, 369
PctI	GAATGC	2 cut(s)	1417, 1806
PfeI	GAWTC	4 cut(s)	41, 943, 1177, 1486
Pfl23II	CGTACG	2 cut(s)	243, 285
PinAI	ACCGGT	1 cut(s)	186
PkrI	GCNGC	6 cut(s)	108, 136, 409, 1465, 1702, 1805
PleI	GAGTC	1 cut(s)	639
PluTI	GGCGCC	2 cut(s)	140, 263
PpsI	GAGTC	1 cut(s)	639
Ppu21I	YACGTR	1 cut(s)	243
PscI	ACATGT	1 cut(s)	1736
Psp6I	CCWGG	2 cut(s)	165, 306
PspFI	CCCAGC	4 cut(s)	428, 498, 1556, 1743
PspGI	CCWGG	2 cut(s)	165, 306
PspLI	CGTACG	2 cut(s)	243, 285
PspN4I	GGNNCC	7 cut(s)	116, 138, 181, 261, 576, 1158, 1379
PspPI	GGNCC	5 cut(s)	163, 180, 272, 574, 586
PstNI	CAGNNNCTG	1 cut(s)	1489
PsuI	RGATCY	2 cut(s)	4, 1377
RsaI	GTAC	7 cut(s)	245, 287, 380, 434, 932, 1106, 1763
RsaNI	GTAC	7 cut(s)	244, 286, 379, 433, 931, 1105, 1762
RseI	CAYNNNNRTG	2 cut(s)	396, 1287
SacII	CCGCGG	1 cut(s)	135
SalI	GTCGAC	1 cut(s)	146
SaqAI	TTAA	3 cut(s)	1392, 1758, 1778
SatI	GCNGC	6 cut(s)	107, 135, 408, 1464, 1701, 1804
Sau3AI	GATC	6 cut(s)	4, 25, 412, 847, 1276, 1377
Sau96I	GGNCC	5 cut(s)	163, 180, 272, 574, 586
ScaI	AGTACT	2 cut(s)	1106, 1763
SchI	GAGTC	1 cut(s)	640
ScrFI	CCNGG	7 cut(s)	167, 178, 308, 596, 955, 1150, 1543
SduI	GDGCHC	4 cut(s)	63, 360, 879, 894
SfaNI	GCATC	7 cut(s)	303, 309, 356, 820, 848, 1616, 1717
SfoI	GGCGCC	2 cut(s)	138, 261
Sfr303I	CCGCGG	1 cut(s)	135
SgrBI	CCGCGG	1 cut(s)	135
SinI	GGWCC	2 cut(s)	574, 586
SmiMI	CAYNNNNRTG	2 cut(s)	396, 1287
Sse9I	AATT	7 cut(s)	351, 436, 539, 1431, 1447, 1453, 1576
SseBI	AGGCCT	1 cut(s)	458
SspDI	GGCGCC	2 cut(s)	136, 259
SspMI	CTAG	5 cut(s)	600, 1083, 1503, 1794, 1800
StuI	AGGCCT	1 cut(s)	458
StyD4I	CCNGG	7 cut(s)	165, 176, 306, 594, 953, 1148, 1541
StyI	CCWWGG	3 cut(s)	291, 966, 1713
TaaI	ACNGT	4 cut(s)	87, 854, 1325, 1596
TaiI	ACGT	4 cut(s)	245, 609, 773, 1310
TaqI	TCGA	5 cut(s)	44, 147, 207, 369, 453
TasI	AATT	7 cut(s)	351, 436, 539, 1431, 1447, 1453, 1576
TatI	WGTACW	3 cut(s)	378, 1104, 1761
TauI	GCSGC	2 cut(s)	109, 137
TfiI	GAWTC	4 cut(s)	41, 943, 1177, 1486
Tru1I	TTAA	3 cut(s)	1392, 1758, 1778
Tru9I	TTAA	3 cut(s)	1392, 1758, 1778
TscAI	CASTG	3 cut(s)	857, 1244, 1443
TseFI	GTSAC	3 cut(s)	602, 1022, 1353
TseI	GCWGC	4 cut(s)	407, 1463, 1700, 1803
Tsp45I	GTSAC	3 cut(s)	602, 1022, 1353
TspDTI	ATGAA	5 cut(s)	579, 632, 764, 1262, 1695
TspGWI	ACGGA	3 cut(s)	624, 680, 1605
TspRI	CASTG	3 cut(s)	857, 1244, 1443
VneI	GTGCAC	1 cut(s)	875
VpaK11BI	GGWCC	2 cut(s)	574, 586
XceI	RCATGY	3 cut(s)	1550, 1653, 1740
XmiI	GTMKAC	1 cut(s)	147
XspI	CTAG	5 cut(s)	600, 1083, 1503, 1794, 1800
ZrmI	AGTACT	2 cut(s)	1106, 1763
Zsp2I	ATGCAT	2 cut(s)	1419, 1694

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.