Rw4G035090

pre-mRNA-processing factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0004435
Physical Location & Seq
Forward (+)
61946520 .. 61950159
3640 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G035090.1

Sequence Viewer

Length: 1353 bp
ATGGATCTCCTCCAAGCCTACTCCGACGACCAAAACCCTAATTCCTCCCCGGAATCTTCGCCTCCGCGGGTCCTCCCACCCAAGTCCGCCGCGCCCCAGGTCGACGACACCATGCTGGCCCTGTCGGTGGCCAAGAACCGCAGCGTATTGTCCCGGCCCATCGACCCGACGCAGCACCTCGTCGACTTCAACCCGACCTACGACCAGCTCTGGGCCCCAATCTACGGCCCATCTCACCCTTACGCCAAGGACGGCCTCGCCCAGGGCATGCGCAACCACAAGCTAGGGTTCGTCGAGGACGCCGCCATCGAGCCCTTCATCTTCGACGAGCAGTACAACACTTTCCAGAACTACGGCTACGCCGCCGACCCCTCCGCCTCCGCCGGCTACAATTACGTCGGCGATTTGGCCGCCTTGCAGAAAAACGACGCCGTTTCGGTGTACAACATCCCCCAGCACGAGCAGAAGAAGCGGAAGATTGAGAAGAGGAAGGAGAACGAGGATGGTGAAGAAGACGCCGAGATGGACCCGGAGGAGGTGGCGAACCCGGCCAGCGACGCGTGGCTGATGAAGAATAAGAAGAGCCCATGGGCCGGGAAGAAGGAGGGTTTGCCGGCGGAGCTGACGGAGGAGCAGAAGAAATATGCAGAGGAATATGCGAAGAAGAAAGGTGAAGAGAAAGGTGCCGGCGACAAGGGAGAGGCTGTGGTTGAGAAGACTACTTTCCACGGCAAAGAAGAGAGAGACTATCAAGGAAGGTCTTGGATTGCGCCGCCGAGAGATGCCAAGGCTACTAATGATCACTGTTACATTCCGAAACGGCTTGTGCATACTTGGAGTGGTCACACCAAGGGTGTGTCTGCTATTAGGTTCTTCCCGAATTCGGGGCATTTGATTCTCTCTGCAGGGCTGGATACTAAGGTGAAGATTTGGGATGTGTTCAACACTGGTAAGTGTATGAGAACTTACATGGGGCATTCGAAGGGTGTTAGGGATATTTGTTTTTCGAATGATGGGAGTAAGTTTTTGAGTGCTGGTTATGATAAGAATATCAAGTATTGGGATACGGAAACTGGGCAGGTGATATCTACATTTTCGACTGGGAAGGTTCCGTATGTGGTGAAGCTTAATCCGGATGAGGATAAGCAGAATGTGTTGTTGGCTGGGATGAGTGATAAGAAGATTGTTCAGTGGGATATGAATGAGGGGAAGATCACTCAAGAGTATGATCAGCATTTGGGTGCGGTGAATACCATTACATTTGTTGATAATAATCGAGGTTTGTTACTTCCAGTGATGACAAGTCTCTTCGTGTATGGGAGTTTGGATTCCTGTGGTTATCAAGTATATTAG

Protein Analysis

450

Amino Acids

50.36

Weight (kDa)

5.65

Isoelectric Point (pI)

38.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40 PF00400 274 - 312 4e-08 WD domain, G-beta repeat
WD40_Prp19 PF24814 274 - 424 5.6e-19 Prp19 WD40 domain
Beta-prop_WDR3_1st PF25173 275 - 366 9.7e-17 WDR3 first beta-propeller domain
Beta-prop_THOC3 PF25174 275 - 380 9.4e-18 THOC3 beta-propeller domain
WD40_CDC20-Fz PF24807 275 - 368 2.2e-09 CDC20/Fizzy WD40 domain
Beta-prop_EML PF23409 277 - 421 7.2e-06 Echinoderm microtubule-associated protein first beta-propeller
WD40_Gbeta PF25391 278 - 347 3.6e-06 G protein beta WD-40 repeat protein
Beta-prop_WDR5 PF25175 279 - 425 1.7e-28 WDR5 beta-propeller domain
EIF3I PF24805 280 - 380 1.7e-11 EIF3I
Beta-prop_WDR3_2nd PF25172 281 - 402 6.1e-12 WDR3 second beta-propeller domain
WDR55 PF24796 286 - 429 2.4e-14 WDR55
Beta-prop_WDR36-Utp21_2nd PF25168 308 - 381 1.1e-10 WDR36/Utp21 second beta-propeller domain
WD40 PF00400 317 - 355 4.1e-10 WD domain, G-beta repeat
Beta-prop_TEP1_2nd PF25047 320 - 424 4.9e-07 TEP-1 second beta-propeller
Beta-prop_THOC3 PF25174 322 - 430 1.9e-13 THOC3 beta-propeller domain
WD40_RFWD3 PF23419 326 - 401 2e-07 E3 ubiquitin-protein ligase RFWD3 WD40 domain
WD40_Gbeta PF25391 343 - 426 3.6e-06 G protein beta WD-40 repeat protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1069
Acc16I TGCGCA 1 cut(s) 272
Acc36I ACCTGC 1 cut(s) 1069
AccB1I GGYRCC 1 cut(s) 683
AccI GTMKAC 2 cut(s) 102, 183
AccII CGCG 3 cut(s) 67, 92, 560
AccIII TCCGGA 1 cut(s) 1132
AclWI GGATC 1 cut(s) 12
AcoI YGGCCR 3 cut(s) 129, 408, 549
AcsI RAATTY 1 cut(s) 880
AcyI GRCGYC 3 cut(s) 300, 429, 516
AfaI GTAC 2 cut(s) 335, 443
AfiI CCNNNNNNNGG 8 cut(s) 127, 211, 224, 262, 535, 593, 883, 884
AflIII ACRYGT 1 cut(s) 558
AgsI TTSAA 2 cut(s) 190, 943
AjnI CCWGG 2 cut(s) 96, 261
AjuI GAANNNNNNNTTGG 2 cut(s) 1142, 1174
AluBI AGCT 4 cut(s) 208, 283, 622, 1126
AluI AGCT 4 cut(s) 208, 283, 622, 1126
Alw26I GTCTC 2 cut(s) 738, 1310
AlwI GGATC 1 cut(s) 12
Aor13HI TCCGGA 1 cut(s) 1132
AoxI GGCC 9 cut(s) 117, 129, 155, 213, 226, 253, 408, 549, 591
ApaI GGGCCC 1 cut(s) 217
ApeKI GCWGC 2 cut(s) 141, 172
ApoI RAATTY 1 cut(s) 880
AspLEI GCGC 3 cut(s) 94, 273, 772
AspS9I GGNCC 8 cut(s) 70, 118, 156, 213, 214, 227, 526, 591
AsuC2I CCSGG 5 cut(s) 50, 154, 530, 548, 595
AsuHPI GGTGA 7 cut(s) 227, 518, 683, 934, 1093, 1132, 1258
AsuII TTCGAA 2 cut(s) 980, 1007
AvaII GGWCC 2 cut(s) 70, 526
BaeGI GKGCMC 1 cut(s) 217
BaeI ACNNNNGTAYC 2 cut(s) 906, 939
BalI TGGCCA 1 cut(s) 131
BanI GGYRCC 1 cut(s) 683
BanII GRGCYC 3 cut(s) 217, 315, 587
BauI CACGAG 1 cut(s) 458
BbsI GAAGAC 2 cut(s) 519, 722
BbvI GCAGC 2 cut(s) 153, 184
BccI CCATC 6 cut(s) 167, 238, 314, 497, 517, 1007
BceAI ACGGC 6 cut(s) 241, 268, 370, 416, 745, 836
BciT130I CCWGG 2 cut(s) 98, 263
BciVI GTATCC 2 cut(s) 907, 1057
BclI TGATCA 2 cut(s) 799, 1228
BcnI CCSGG 5 cut(s) 50, 154, 530, 548, 595
BcoDI GTCTC 2 cut(s) 738, 1310
BfaI CTAG 1 cut(s) 284
BfmI CTRYAG 1 cut(s) 903
BfuAI ACCTGC 1 cut(s) 1069
BfuI GTATCC 2 cut(s) 907, 1057
BisI GCNGC 7 cut(s) 90, 142, 173, 303, 363, 411, 773
BlsI GCNGC 7 cut(s) 91, 143, 174, 304, 364, 412, 774
Bme1390I CCNGG 7 cut(s) 50, 98, 154, 263, 530, 548, 595
Bme18I GGWCC 2 cut(s) 70, 526
BmgT120I GGNCC 8 cut(s) 70, 118, 156, 213, 214, 227, 526, 591
BmiI GGNNCC 6 cut(s) 71, 215, 216, 528, 685, 1110
BmrFI CCNGG 7 cut(s) 50, 98, 154, 263, 530, 548, 595
BmrI ACTGGG 2 cut(s) 1083, 1110
BmsI GCATC 1 cut(s) 772
BmuI ACTGGG 2 cut(s) 1083, 1110
BpiI GAAGAC 2 cut(s) 519, 722
Bpu14I TTCGAA 2 cut(s) 980, 1007
BpuEI CTTGAG 1 cut(s) 1203
BpuMI CCSGG 5 cut(s) 50, 154, 530, 548, 595
BsaBI GATNNNNATC 1 cut(s) 1272
BsaHI GRCGYC 3 cut(s) 300, 429, 516
BsaWI WCCGGW 1 cut(s) 1132
BsaXI ACNNNNNCTCC 2 cut(s) 690, 720
Bsc4I CCNNNNNNNGG 8 cut(s) 127, 211, 224, 262, 535, 593, 883, 884
Bse118I RCCGGY 3 cut(s) 383, 613, 686
Bse1I ACTGG 4 cut(s) 952, 1078, 1105, 1292
Bse8I GATNNNNATC 1 cut(s) 1272
BseAI TCCGGA 1 cut(s) 1132
BseBI CCWGG 2 cut(s) 98, 263
BseGI GGATG 5 cut(s) 447, 508, 940, 1141, 1173
BseJI GATNNNNATC 1 cut(s) 1272
BseLI CCNNNNNNNGG 8 cut(s) 127, 211, 224, 262, 535, 593, 883, 884
BseNI ACTGG 4 cut(s) 952, 1078, 1105, 1292
BseRI GAGGAG 2 cut(s) 548, 644
BseSI GKGCMC 1 cut(s) 217
BseXI GCAGC 2 cut(s) 153, 184
BseYI CCCAGC 2 cut(s) 453, 1163
Bsh1236I CGCG 3 cut(s) 67, 92, 560
BshFI GGCC 9 cut(s) 119, 131, 157, 215, 228, 255, 410, 551, 593
BshNI GGYRCC 1 cut(s) 683
BsiSI CCGG 9 cut(s) 50, 154, 384, 530, 548, 594, 614, 687, 1133
BslFI GGGAC 1 cut(s) 136
BslI CCNNNNNNNGG 8 cut(s) 127, 211, 224, 262, 535, 593, 883, 884
BsmAI GTCTC 2 cut(s) 738, 1310
BsmFI GGGAC 1 cut(s) 136
BsmI GAATGC 1 cut(s) 976
BsnI GGCC 9 cut(s) 119, 131, 157, 215, 228, 255, 410, 551, 593
Bsp119I TTCGAA 2 cut(s) 980, 1007
Bsp120I GGGCCC 1 cut(s) 213
Bsp1286I GDGCHC 3 cut(s) 217, 315, 587
Bsp13I TCCGGA 1 cut(s) 1132
Bsp1407I TGTACA 1 cut(s) 441
Bsp143I GATC 4 cut(s) 4, 799, 1212, 1228
Bsp19I CCATGG 1 cut(s) 587
BspANI GGCC 9 cut(s) 119, 131, 157, 215, 228, 255, 410, 551, 593
BspEI TCCGGA 1 cut(s) 1132
BspFNI CGCG 3 cut(s) 67, 92, 560
BspLI GGNNCC 6 cut(s) 71, 215, 216, 528, 685, 1110
BspMAI CTGCAG 1 cut(s) 907
BspMI ACCTGC 1 cut(s) 1069
BspPI GGATC 1 cut(s) 12
BspQI GCTCTTC 1 cut(s) 575
BspT104I TTCGAA 2 cut(s) 980, 1007
BspT107I GGYRCC 1 cut(s) 683
BsrFI RCCGGY 3 cut(s) 383, 613, 686
BsrGI TGTACA 1 cut(s) 441
BsrI ACTGG 4 cut(s) 952, 1078, 1105, 1292
BssAI RCCGGY 3 cut(s) 383, 613, 686
BssMI GATC 4 cut(s) 4, 799, 1212, 1228
BssNI GRCGYC 3 cut(s) 300, 429, 516
BssSI CACGAG 1 cut(s) 458
BssT1I CCWWGG 4 cut(s) 246, 587, 786, 849
Bst2BI CACGAG 1 cut(s) 458
Bst2UI CCWGG 2 cut(s) 98, 263
Bst4CI ACNGT 1 cut(s) 806
Bst6I CTCTTC 5 cut(s) 479, 575, 669, 732, 1313
BstACI GRCGYC 3 cut(s) 300, 429, 516
BstAUI TGTACA 1 cut(s) 441
BstBI TTCGAA 2 cut(s) 980, 1007
BstC8I GCNNGC 6 cut(s) 117, 269, 385, 553, 615, 688
BstDEI CTNAG 1 cut(s) 918
BstDSI CCRYGG 3 cut(s) 65, 587, 727
BstENI CCTNNNNNAGG 1 cut(s) 260
BstF5I GGATG 5 cut(s) 447, 508, 940, 1141, 1173
BstFNI CGCG 3 cut(s) 67, 92, 560
BstHHI GCGC 3 cut(s) 94, 273, 772
BstKTI GATC 4 cut(s) 7, 802, 1215, 1231
BstMAI GTCTC 2 cut(s) 738, 1310
BstMBI GATC 4 cut(s) 4, 799, 1212, 1228
BstMWI GCNNNNNNNGC 4 cut(s) 469, 548, 557, 619
BstNI CCWGG 2 cut(s) 98, 263
BstNSI RCATGY 1 cut(s) 271
BstSCI CCNGG 7 cut(s) 48, 96, 152, 261, 528, 546, 593
BstSFI CTRYAG 1 cut(s) 903
BstSLI GKGCMC 1 cut(s) 217
BstUI CGCG 3 cut(s) 67, 92, 560
BstV1I GCAGC 2 cut(s) 153, 184
BstV2I GAAGAC 2 cut(s) 519, 722
BstX2I RGATCY 1 cut(s) 4
BstYI RGATCY 1 cut(s) 4
BsuI GTATCC 2 cut(s) 907, 1057
BsuRI GGCC 9 cut(s) 119, 131, 157, 215, 228, 255, 410, 551, 593
BtgI CCRYGG 3 cut(s) 65, 587, 727
BtsCI GGATG 5 cut(s) 447, 508, 940, 1141, 1173
BtsIMutI CAGTG 4 cut(s) 802, 945, 1196, 1299
BveI ACCTGC 1 cut(s) 1069
Cac8I GCNNGC 6 cut(s) 117, 269, 385, 553, 615, 688
CfoI GCGC 3 cut(s) 94, 273, 772
Cfr10I RCCGGY 3 cut(s) 383, 613, 686
Cfr13I GGNCC 8 cut(s) 70, 118, 156, 213, 214, 227, 526, 591
Cfr42I CCGCGG 1 cut(s) 68
CseI GACGC 5 cut(s) 178, 308, 437, 524, 566
Csp6I GTAC 2 cut(s) 334, 442
CviAII CATG 4 cut(s) 112, 268, 588, 970
CviQI GTAC 2 cut(s) 334, 442
DdeI CTNAG 1 cut(s) 918
DpnI GATC 4 cut(s) 6, 801, 1214, 1230
DpnII GATC 4 cut(s) 4, 799, 1212, 1228
EaeI YGGCCR 3 cut(s) 129, 408, 549
Eam1104I CTCTTC 5 cut(s) 479, 575, 669, 732, 1313
EarI CTCTTC 5 cut(s) 479, 575, 669, 732, 1313
EciI GGCGGA 4 cut(s) 76, 364, 370, 632
Eco130I CCWWGG 4 cut(s) 246, 587, 786, 849
Eco24I GRGCYC 3 cut(s) 217, 315, 587
Eco32I GATATC 1 cut(s) 1086
Eco47I GGWCC 2 cut(s) 70, 526
EcoNI CCTNNNNNAGG 1 cut(s) 260
EcoO109I RGGNCCY 2 cut(s) 70, 214
EcoRI GAATTC 1 cut(s) 880
EcoRII CCWGG 2 cut(s) 96, 261
EcoRV GATATC 1 cut(s) 1086
EcoT14I CCWWGG 4 cut(s) 246, 587, 786, 849
EcoT38I GRGCYC 3 cut(s) 217, 315, 587
ErhI CCWWGG 4 cut(s) 246, 587, 786, 849
FaeI CATG 4 cut(s) 115, 271, 591, 973
FaqI GGGAC 1 cut(s) 136
FatI CATG 4 cut(s) 111, 267, 587, 969
FauI CCCGC 1 cut(s) 60
FbaI TGATCA 2 cut(s) 799, 1228
FblI GTMKAC 2 cut(s) 102, 183
Fnu4HI GCNGC 7 cut(s) 90, 142, 173, 303, 363, 411, 773
FokI GGATG 5 cut(s) 434, 515, 947, 1148, 1180
FriOI GRGCYC 3 cut(s) 217, 315, 587
Fsp4HI GCNGC 7 cut(s) 90, 142, 173, 303, 363, 411, 773
FspBI CTAG 1 cut(s) 284
FspI TGCGCA 1 cut(s) 272
GlaI GCGC 3 cut(s) 93, 272, 771
GluI GCNGC 7 cut(s) 90, 142, 173, 303, 363, 411, 773
GsaI CCCAGC 2 cut(s) 457, 1167
HaeIII GGCC 9 cut(s) 119, 131, 157, 215, 228, 255, 410, 551, 593
HapII CCGG 9 cut(s) 50, 154, 384, 530, 548, 594, 614, 687, 1133
HgaI GACGC 5 cut(s) 178, 308, 437, 524, 566
HhaI GCGC 3 cut(s) 94, 273, 772
Hin1I GRCGYC 3 cut(s) 300, 429, 516
Hin1II CATG 4 cut(s) 115, 271, 591, 973
Hin6I GCGC 3 cut(s) 92, 271, 770
HinP1I GCGC 3 cut(s) 92, 271, 770
HincII GTYRAC 2 cut(s) 103, 184
HindII GTYRAC 2 cut(s) 103, 184
HindIII AAGCTT 1 cut(s) 1124
HinfI GANTC 3 cut(s) 53, 895, 1328
HpaII CCGG 9 cut(s) 50, 154, 384, 530, 548, 594, 614, 687, 1133
HphI GGTGA 7 cut(s) 227, 518, 683, 934, 1093, 1132, 1258
Hpy166II GTNNAC 3 cut(s) 103, 184, 442
Hpy188I TCNGA 2 cut(s) 25, 816
Hpy188III TCNNGA 4 cut(s) 346, 877, 1133, 1220
Hpy8I GTNNAC 3 cut(s) 103, 184, 442
Hpy99I CGWCG 9 cut(s) 29, 107, 172, 185, 296, 329, 401, 431, 560
HpyAV CCTTC 6 cut(s) 325, 484, 595, 750, 976, 1099
HpyCH4III ACNGT 1 cut(s) 806
HpyCH4IV ACGT 1 cut(s) 396
HpyCH4V TGCA 4 cut(s) 418, 647, 829, 905
HpyF10VI GCNNNNNNNGC 4 cut(s) 469, 548, 557, 619
HpyF3I CTNAG 1 cut(s) 918
HpySE526I ACGT 1 cut(s) 396
Hsp92I GRCGYC 3 cut(s) 300, 429, 516
Hsp92II CATG 4 cut(s) 115, 271, 591, 973
HspAI GCGC 3 cut(s) 92, 271, 770
Kpn2I TCCGGA 1 cut(s) 1132
KroI GCCGGC 3 cut(s) 383, 613, 686
KroNI GCCGGC 3 cut(s) 385, 615, 688
Ksp22I TGATCA 2 cut(s) 799, 1228
KspI CCGCGG 1 cut(s) 68
Kzo9I GATC 4 cut(s) 4, 799, 1212, 1228
LguI GCTCTTC 1 cut(s) 575
LmnI GCTCC 2 cut(s) 619, 631
Lsp1109I GCAGC 2 cut(s) 153, 184
LweI GCATC 1 cut(s) 772
MaeI CTAG 1 cut(s) 284
MaeII ACGT 1 cut(s) 396
MaeIII GTNAC 3 cut(s) 806, 842, 1284
MalI GATC 4 cut(s) 6, 801, 1214, 1230
MboI GATC 4 cut(s) 4, 799, 1212, 1228
MflI RGATCY 1 cut(s) 4
MhlI GDGCHC 3 cut(s) 217, 315, 587
MlsI TGGCCA 1 cut(s) 131
MluCI AATT 3 cut(s) 40, 391, 880
MluI ACGCGT 1 cut(s) 558
MluNI TGGCCA 1 cut(s) 131
MmeI TCCRAC 1 cut(s) 48
Mox20I TGGCCA 1 cut(s) 131
MroI TCCGGA 1 cut(s) 1132
MroNI GCCGGC 3 cut(s) 383, 613, 686
MscI TGGCCA 1 cut(s) 131
MseI TTAA 1 cut(s) 1128
MslI CAYNNNNRTG 1 cut(s) 1239
Msp20I TGGCCA 1 cut(s) 131
MspA1I CMGCKG 1 cut(s) 67
MspI CCGG 9 cut(s) 50, 154, 384, 530, 548, 594, 614, 687, 1133
MspR9I CCNGG 7 cut(s) 50, 98, 154, 263, 530, 548, 595
Mva1269I GAATGC 1 cut(s) 976
MvaI CCWGG 2 cut(s) 98, 263
MvnI CGCG 3 cut(s) 67, 92, 560
MwoI GCNNNNNNNGC 4 cut(s) 469, 548, 557, 619
NaeI GCCGGC 3 cut(s) 385, 615, 688
NciI CCSGG 5 cut(s) 50, 154, 530, 548, 595
NcoI CCATGG 1 cut(s) 587
NdeII GATC 4 cut(s) 4, 799, 1212, 1228
NgoMIV GCCGGC 3 cut(s) 383, 613, 686
NlaIII CATG 4 cut(s) 115, 271, 591, 973
NlaIV GGNNCC 6 cut(s) 71, 215, 216, 528, 685, 1110
NmeAIII GCCGAG 2 cut(s) 544, 801
NmuCI GTSAC 1 cut(s) 842
NsbI TGCGCA 1 cut(s) 272
NspI RCATGY 1 cut(s) 271
NspV TTCGAA 2 cut(s) 980, 1007
PaeI GCATGC 1 cut(s) 271
PaqCI CACCTGC 1 cut(s) 1069
PasI CCCWGGG 1 cut(s) 262
PciSI GCTCTTC 1 cut(s) 575
PcsI WCGNNNNNNNCGW 1 cut(s) 306
PctI GAATGC 1 cut(s) 976
PdiI GCCGGC 3 cut(s) 385, 615, 688
PfeI GAWTC 3 cut(s) 53, 895, 1328
PkrI GCNGC 7 cut(s) 91, 143, 174, 304, 364, 412, 774
PpuMI RGGWCCY 1 cut(s) 70
Psp5II RGGWCCY 1 cut(s) 70
Psp6I CCWGG 2 cut(s) 96, 261
PspFI CCCAGC 2 cut(s) 453, 1163
PspGI CCWGG 2 cut(s) 96, 261
PspN4I GGNNCC 6 cut(s) 71, 215, 216, 528, 685, 1110
PspOMI GGGCCC 1 cut(s) 213
PspPI GGNCC 8 cut(s) 70, 118, 156, 213, 214, 227, 526, 591
PspPPI RGGWCCY 1 cut(s) 70
PsrI GAACNNNNNNTAC 2 cut(s) 341, 373
PstI CTGCAG 1 cut(s) 907
PsuI RGATCY 1 cut(s) 4
RsaI GTAC 2 cut(s) 335, 443
RsaNI GTAC 2 cut(s) 334, 442
RseI CAYNNNNRTG 1 cut(s) 1239
SacII CCGCGG 1 cut(s) 68
SalI GTCGAC 2 cut(s) 101, 182
SapI GCTCTTC 1 cut(s) 575
SaqAI TTAA 1 cut(s) 1128
SatI GCNGC 7 cut(s) 90, 142, 173, 303, 363, 411, 773
Sau3AI GATC 4 cut(s) 4, 799, 1212, 1228
Sau96I GGNCC 8 cut(s) 70, 118, 156, 213, 214, 227, 526, 591
ScrFI CCNGG 7 cut(s) 50, 98, 154, 263, 530, 548, 595
SduI GDGCHC 3 cut(s) 217, 315, 587
SfaNI GCATC 1 cut(s) 772
SfcI CTRYAG 1 cut(s) 903
Sfr303I CCGCGG 1 cut(s) 68
SfuI TTCGAA 2 cut(s) 980, 1007
SgrBI CCGCGG 1 cut(s) 68
SinI GGWCC 2 cut(s) 70, 526
SmiMI CAYNNNNRTG 1 cut(s) 1239
SmlI CTYRAG 1 cut(s) 1218
SmoI CTYRAG 1 cut(s) 1218
SphI GCATGC 1 cut(s) 271
Sse9I AATT 3 cut(s) 40, 391, 880
SspMI CTAG 1 cut(s) 284
StyD4I CCNGG 7 cut(s) 48, 96, 152, 261, 528, 546, 593
StyI CCWWGG 4 cut(s) 246, 587, 786, 849
TaaI ACNGT 1 cut(s) 806
TaiI ACGT 1 cut(s) 399
TasI AATT 3 cut(s) 40, 391, 880
TatI WGTACW 2 cut(s) 333, 441
TauI GCSGC 5 cut(s) 92, 305, 365, 413, 775
TfiI GAWTC 3 cut(s) 53, 895, 1328
Tru1I TTAA 1 cut(s) 1128
Tru9I TTAA 1 cut(s) 1128
TscAI CASTG 4 cut(s) 809, 952, 1196, 1299
TseFI GTSAC 1 cut(s) 842
TseI GCWGC 2 cut(s) 141, 172
Tsp45I GTSAC 1 cut(s) 842
TspDTI ATGAA 3 cut(s) 307, 584, 1214
TspGWI ACGGA 3 cut(s) 641, 1082, 1101
TspRI CASTG 4 cut(s) 809, 952, 1196, 1299
VpaK11BI GGWCC 2 cut(s) 70, 526
XagI CCTNNNNNAGG 1 cut(s) 260
XapI RAATTY 1 cut(s) 880
XceI RCATGY 1 cut(s) 271
XmiI GTMKAC 2 cut(s) 102, 183
XspI CTAG 1 cut(s) 284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.