Rh5AG349300

pre-mRNA-processing factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0004435
Physical Location & Seq
Reverse (-)
57877972 .. 57880085
2114 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG349300.1

Sequence Viewer

Length: 1587 bp
ATGGATCTTCTCCAAGCCAATTACGACCAACTGGACGATGATTTGGGCCGTTCAGAGGACCACAACCAAAACCCTAATTTCACATCGTCTCCAGAAGCTTCTCCACCAAGGCTCCTCCTCCAAGCCAAGTCCGCCGCACCACCCACGGTGGAAAAGACATTGTCAACGCCCATCGATCCCACCCAGCAGCACCTTGTCCACTTCAACCCTAACTTCTACGGCTCACAGCTGTCATGCATACGCAACCACAACCTTGGCTTCGTTGAAGACGCCTCCATCGAGCCCTTCGCCTTCCACGAGCAGTACAATACCTTCCAAACTTATGGCTACGCCGCCGATCCCTCCGCCTCTGACTTCGGCCATAGAGAGAACGACGCCGTTTCCATGTACAATGTACCGCAGCACGAGCAGAAAAAGAAGCGCAAGACTGAAAAGAGCAAGGTATCGGATGAGGGTTTGCCGGCTGAGCTAACGGAGGAGCAGAGGAAATACGCCGAGGAATATTATGCCAAGAAGAAAGGTGCACTGAGAGGAGGTGCCGGCGCCGACAAGGGCGAGGCTATACTCTTCGAAAGAACTTGTTTTCATGGAAAAGAAGAGAGGGATTATCAGGGAAGGTCTTGGATAGCGCCGCCTAGTTATGCTGAGGCCACCAATGAGTACTGTTTCACACCCAAGAGGCTGGTCCACACTTGGAGTGGCCACACAAAGGGTGTGTCTGCTATTAGGTTCTACCCCAGATACGGGCATTTACTTCTCTCTGCAGGGATGGATAGCAGGGTCAAGATCTGGGACGTTTTCAATTACGGGAACTGCATGAGAACATACATGGGTCATTCCGAGGCAGTTAAGGACATTTGTTTCTCTAATGATGGCACTAAGTTTTTGAGCGCTTCTTTTGATAAGAATATCAAGTACTGGGATACAGAAACTGGCCAAGTCATATCCACCTTTTCGACCGGAAAAGTACCGTATGTGATTAAGCTTAATCCGGATGAGGATAAGCAGAATGTGTTATTGGCGGGGATGAGTGACAATAAGATTGTTCAGTGGGATGTGAACGAGGGGAAGAAGACCACTCAAAAGTATAATCAGCATTTGCGTGCCGTGAATACTATTACGTTTGTTGATAATAACAGGAGGTTTGTTACTTCAAGTGATGACAAGTCTCTGCGGGTCTGGGAGTTTGGGATTCCTGTGGTGGTTAAGTGCATCAGTGAGCCTCACATGTATTCTATGCCTTCGGTTTGCTTGCACCCTAGTTCGAATTGGCTTGCAGCACAGAGCATGGATAATCAGATTCTTGTTTACAGCACTGGGGAGAAATTTCAGCTAGAAAAGAAGAGGCGGTTTTCAGGGCATGTTGTTGCGGGGCATGCTTGCCAAGTGAATTTTTCGCCAGATGGACGGTTTGTTTTCTCTGGTGACAGCGAAGGTCGATGCTGGTTTTGGGATTGGAAGTCTTGCAAAGTCTTGAAAACTCTCAAATGTCATCAGGGGGTATGCACTGGGGCTGAGTGGCATCCTTTGGAGCAGAGTAAAGTGGCAACGTGTGGCTGGGATGGCTTGATTAAGTATTGGGATTAG

Protein Analysis

528

Amino Acids

60.03

Weight (kDa)

6.68

Isoelectric Point (pI)

43.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR3_1st PF25173 226 - 319 2.1e-17 WDR3 first beta-propeller domain
WD40_Prp19 PF24814 226 - 321 4.3e-12 Prp19 WD40 domain
WD40 PF00400 227 - 265 2.3e-07 WD domain, G-beta repeat
Beta-prop_THOC3 PF25174 227 - 333 2.6e-17 THOC3 beta-propeller domain
WD40_CDC20-Fz PF24807 228 - 394 2.4e-17 CDC20/Fizzy WD40 domain
Beta-prop_EML_2 PF23414 229 - 319 2.6e-07 Echinoderm microtubule-associated protein second beta-propeller
WD40_Gbeta PF25391 231 - 302 5.6e-06 G protein beta WD-40 repeat protein
Beta-prop_WDR5 PF25175 232 - 527 2.6e-49 WDR5 beta-propeller domain
Beta-prop_CAF1B_HIR1 PF24105 233 - 321 5e-06 CAF1B/HIR1 beta-propeller domain
EIF3I PF24805 233 - 331 2.5e-13 EIF3I
WDR55 PF24796 238 - 396 2.7e-15 WDR55
Beta-prop_WDR3_2nd PF25172 248 - 319 2.5e-11 WDR3 second beta-propeller domain
WD40_MABP1-WDR62_2nd PF24782 253 - 307 3.7e-06 MABP1/WDR62 second WD40 domain
Beta-prop_EML PF23409 258 - 444 3.4e-08 Echinoderm microtubule-associated protein first beta-propeller
WD40 PF00400 270 - 308 4.1e-09 WD domain, G-beta repeat
Beta-prop_WDR36-Utp21_2nd PF25168 271 - 334 3e-10 WDR36/Utp21 second beta-propeller domain
Beta-prop_TEP1_2nd PF25047 274 - 395 2.7e-09 TEP-1 second beta-propeller
WD40_RFWD3 PF23419 279 - 365 4.8e-08 E3 ubiquitin-protein ligase RFWD3 WD40 domain
WD40_Gbeta PF25391 294 - 396 1.9e-10 G protein beta WD-40 repeat protein
Beta-prop_WDR36-Utp21_1st PF25171 310 - 396 1.3e-09 WDR36/Utp21 first beta-propeller
WD40_Prp19 PF24814 326 - 505 2.4e-21 Prp19 WD40 domain
Beta-prop_WDR3_1st PF25173 330 - 438 4.4e-11 WDR3 first beta-propeller domain
WD40_WDHD1_1st PF24817 335 - 522 4e-14 WDHD1 first WD40 domain
Beta-prop_WDR36-Utp21_2nd PF25168 336 - 432 3.8e-06 WDR36/Utp21 second beta-propeller domain
Beta-prop_THOC3 PF25174 339 - 528 1.7e-22 THOC3 beta-propeller domain
WDR90_beta-prop_4th PF23342 370 - 501 5.3e-06 WDR90, 4th beta-propeller
Beta-prop_EML_2 PF23414 378 - 507 1.4e-09 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_TEP1_2nd PF25047 380 - 528 5.1e-07 TEP-1 second beta-propeller
WD40_CDC20-Fz PF24807 409 - 528 4.3e-09 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st PF25173 413 - 528 9.4e-11 WDR3 first beta-propeller domain
WDR55 PF24796 415 - 528 2.2e-08 WDR55
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 536, 542
AccIII TCCGGA 1 cut(s) 991
AclWI GGATC 3 cut(s) 12, 170, 332
AcoI YGGCCR 3 cut(s) 358, 700, 934
AcsI RAATTY 2 cut(s) 1325, 1390
AcyI GRCGYC 3 cut(s) 270, 375, 543
AfaI GTAC 6 cut(s) 305, 389, 396, 662, 917, 969
AfeI AGCGCT 1 cut(s) 892
AfiI CCNNNNNNNGG 4 cut(s) 55, 709, 743, 744
AflIII ACRYGT 2 cut(s) 1227, 1550
AgsI TTSAA 5 cut(s) 205, 266, 802, 1155, 1477
AjuI GAANNNNNNNTTGG 2 cut(s) 1001, 1033
AluBI AGCT 5 cut(s) 98, 229, 469, 985, 1333
AluI AGCT 5 cut(s) 98, 229, 469, 985, 1333
Alw21I GWGCWC 1 cut(s) 526
Alw26I GTCTC 2 cut(s) 93, 1173
Alw44I GTGCAC 1 cut(s) 522
AlwI GGATC 3 cut(s) 12, 170, 332
AlwNI CAGNNNCTG 1 cut(s) 932
Aor13HI TCCGGA 1 cut(s) 991
Aor51HI AGCGCT 1 cut(s) 892
AoxI GGCC 5 cut(s) 46, 358, 648, 700, 934
ApaLI GTGCAC 1 cut(s) 522
ApeKI GCWGC 3 cut(s) 187, 400, 1277
ApoI RAATTY 2 cut(s) 1325, 1390
ArsI GACNNNNNNTTYG 2 cut(s) 701, 733
AspLEI GCGC 4 cut(s) 423, 545, 631, 893
AspS9I GGNCC 3 cut(s) 46, 58, 685
AsuHPI GGTGA 1 cut(s) 1436
AsuII TTCGAA 2 cut(s) 570, 1265
AvaII GGWCC 2 cut(s) 58, 685
BaeGI GKGCMC 1 cut(s) 526
BalI TGGCCA 2 cut(s) 702, 936
BanI GGYRCC 2 cut(s) 536, 542
BanII GRGCYC 1 cut(s) 285
BarI GAAGNNNNNNTAC 2 cut(s) 296, 328
BauI CACGAG 2 cut(s) 296, 404
BbsI GAAGAC 2 cut(s) 273, 1079
Bbv12I GWGCWC 1 cut(s) 526
BbvCI CCTCAGC 1 cut(s) 645
BbvI GCAGC 3 cut(s) 199, 412, 1289
BccI CCATC 6 cut(s) 179, 284, 763, 866, 1397, 1556
BceAI ACGGC 4 cut(s) 33, 235, 362, 1091
BciVI GTATCC 1 cut(s) 916
BcoDI GTCTC 2 cut(s) 93, 1173
BfaI CTAG 3 cut(s) 636, 1260, 1334
BfmI CTRYAG 1 cut(s) 762
BfoI RGCGCY 3 cut(s) 546, 632, 894
BfuI GTATCC 1 cut(s) 916
BglII AGATCT 1 cut(s) 786
BisI GCNGC 6 cut(s) 135, 188, 333, 401, 632, 1278
BlpI GCTNAGC 1 cut(s) 465
BlsI GCNGC 6 cut(s) 136, 189, 334, 402, 633, 1279
BmcAI AGTACT 2 cut(s) 662, 917
Bme18I GGWCC 2 cut(s) 58, 685
BmgT120I GGNCC 3 cut(s) 46, 58, 685
BmiI GGNNCC 3 cut(s) 113, 538, 544
BmrI ACTGGG 3 cut(s) 928, 1326, 1518
BmsI GCATC 3 cut(s) 1221, 1430, 1531
BmuI ACTGGG 3 cut(s) 928, 1326, 1518
BpiI GAAGAC 2 cut(s) 273, 1079
BpmI CTGGAG 1 cut(s) 75
Bpu10I CCTNAGC 1 cut(s) 645
Bpu1102I GCTNAGC 1 cut(s) 465
Bpu14I TTCGAA 2 cut(s) 570, 1265
Bsa29I ATCGAT 1 cut(s) 174
BsaHI GRCGYC 3 cut(s) 270, 375, 543
BsaJI CCNNGG 5 cut(s) 107, 144, 253, 495, 840
BsaWI WCCGGW 2 cut(s) 959, 991
BsaXI ACNNNNNCTCC 4 cut(s) 73, 96, 103, 126
Bsc4I CCNNNNNNNGG 4 cut(s) 55, 709, 743, 744
Bse118I RCCGGY 2 cut(s) 460, 539
Bse1I ACTGG 5 cut(s) 36, 923, 937, 1321, 1513
BseAI TCCGGA 1 cut(s) 991
BseCI ATCGAT 1 cut(s) 174
BseDI CCNNGG 5 cut(s) 107, 144, 253, 495, 840
BseGI GGATG 7 cut(s) 454, 774, 1000, 1032, 1060, 1522, 1567
BseLI CCNNNNNNNGG 4 cut(s) 55, 709, 743, 744
BseMII CTCAG 4 cut(s) 456, 518, 636, 1506
BseNI ACTGG 5 cut(s) 36, 923, 937, 1321, 1513
BseRI GAGGAG 4 cut(s) 104, 107, 491, 546
BseSI GKGCMC 1 cut(s) 526
BseXI GCAGC 3 cut(s) 199, 412, 1289
BseYI CCCAGC 2 cut(s) 183, 1557
Bsh1285I CGRYCG 1 cut(s) 960
BshFI GGCC 5 cut(s) 48, 360, 650, 702, 936
BshNI GGYRCC 2 cut(s) 536, 542
BshVI ATCGAT 1 cut(s) 174
BsiEI CGRYCG 1 cut(s) 960
BsiHKAI GWGCWC 1 cut(s) 526
BsiSI CCGG 4 cut(s) 461, 540, 960, 992
BslFI GGGAC 1 cut(s) 806
BslI CCNNNNNNNGG 4 cut(s) 55, 709, 743, 744
BsmAI GTCTC 2 cut(s) 93, 1173
BsmBI CGTCTC 1 cut(s) 93
BsmFI GGGAC 1 cut(s) 806
BsnI GGCC 5 cut(s) 48, 360, 650, 702, 936
Bsp119I TTCGAA 2 cut(s) 570, 1265
Bsp1286I GDGCHC 2 cut(s) 285, 526
Bsp13I TCCGGA 1 cut(s) 991
Bsp1407I TGTACA 1 cut(s) 387
Bsp143I GATC 4 cut(s) 4, 175, 337, 786
Bsp1720I GCTNAGC 1 cut(s) 465
BspANI GGCC 5 cut(s) 48, 360, 650, 702, 936
BspCNI CTCAG 4 cut(s) 457, 519, 637, 1507
BspDI ATCGAT 1 cut(s) 174
BspEI TCCGGA 1 cut(s) 991
BspLI GGNNCC 3 cut(s) 113, 538, 544
BspMAI CTGCAG 1 cut(s) 766
BspPI GGATC 3 cut(s) 12, 170, 332
BspT104I TTCGAA 2 cut(s) 570, 1265
BspT107I GGYRCC 2 cut(s) 536, 542
BsrFI RCCGGY 2 cut(s) 460, 539
BsrGI TGTACA 1 cut(s) 387
BsrI ACTGG 5 cut(s) 36, 923, 937, 1321, 1513
BssAI RCCGGY 2 cut(s) 460, 539
BssECI CCNNGG 5 cut(s) 107, 144, 253, 495, 840
BssMI GATC 4 cut(s) 4, 175, 337, 786
BssNI GRCGYC 3 cut(s) 270, 375, 543
BssSI CACGAG 2 cut(s) 296, 404
BssT1I CCWWGG 2 cut(s) 107, 253
Bst2BI CACGAG 2 cut(s) 296, 404
Bst4CI ACNGT 4 cut(s) 148, 665, 972, 1410
Bst6I CTCTTC 3 cut(s) 572, 591, 1337
BstACI GRCGYC 3 cut(s) 270, 375, 543
BstAUI TGTACA 1 cut(s) 387
BstBI TTCGAA 2 cut(s) 570, 1265
BstC8I GCNNGC 7 cut(s) 462, 541, 1104, 1253, 1275, 1377, 1381
BstDEI CTNAG 5 cut(s) 465, 527, 645, 879, 1515
BstDSI CCRYGG 1 cut(s) 144
BstF5I GGATG 7 cut(s) 454, 774, 1000, 1032, 1060, 1522, 1567
BstH2I RGCGCY 3 cut(s) 546, 632, 894
BstHHI GCGC 4 cut(s) 423, 545, 631, 893
BstKTI GATC 4 cut(s) 7, 178, 340, 789
BstMAI GTCTC 2 cut(s) 93, 1173
BstMBI GATC 4 cut(s) 4, 175, 337, 786
BstMCI CGRYCG 1 cut(s) 960
BstMWI GCNNNNNNNGC 5 cut(s) 131, 406, 466, 1376, 1563
BstNSI RCATGY 3 cut(s) 1231, 1364, 1379
BstSFI CTRYAG 1 cut(s) 762
BstSLI GKGCMC 1 cut(s) 526
BstV1I GCAGC 3 cut(s) 199, 412, 1289
BstV2I GAAGAC 2 cut(s) 273, 1079
BstX2I RGATCY 2 cut(s) 4, 786
BstXI CCANNNNNNTGG 3 cut(s) 254, 323, 682
BstYI RGATCY 2 cut(s) 4, 786
Bsu15I ATCGAT 1 cut(s) 174
BsuI GTATCC 1 cut(s) 916
BsuRI GGCC 5 cut(s) 48, 360, 650, 702, 936
BsuTUI ATCGAT 1 cut(s) 174
BtgI CCRYGG 1 cut(s) 144
BtsCI GGATG 7 cut(s) 454, 774, 1000, 1032, 1060, 1522, 1567
BtsIMutI CAGTG 5 cut(s) 524, 1055, 1222, 1314, 1506
Cac8I GCNNGC 7 cut(s) 462, 541, 1104, 1253, 1275, 1377, 1381
CaiI CAGNNNCTG 1 cut(s) 932
CfoI GCGC 4 cut(s) 423, 545, 631, 893
Cfr10I RCCGGY 2 cut(s) 460, 539
Cfr13I GGNCC 3 cut(s) 46, 58, 685
ClaI ATCGAT 1 cut(s) 174
CseI GACGC 2 cut(s) 278, 383
Csp6I GTAC 6 cut(s) 304, 388, 395, 661, 916, 968
CviAII CATG 9 cut(s) 234, 385, 587, 817, 829, 1228, 1288, 1361, 1376
CviQI GTAC 6 cut(s) 304, 388, 395, 661, 916, 968
DdeI CTNAG 5 cut(s) 465, 527, 645, 879, 1515
DinI GGCGCC 1 cut(s) 544
DpnI GATC 4 cut(s) 6, 177, 339, 788
DpnII GATC 4 cut(s) 4, 175, 337, 786
EaeI YGGCCR 3 cut(s) 358, 700, 934
Eam1104I CTCTTC 3 cut(s) 572, 591, 1337
EarI CTCTTC 3 cut(s) 572, 591, 1337
EciI GGCGGA 2 cut(s) 121, 334
Eco130I CCWWGG 2 cut(s) 107, 253
Eco24I GRGCYC 1 cut(s) 285
Eco47I GGWCC 2 cut(s) 58, 685
Eco47III AGCGCT 1 cut(s) 892
EcoT14I CCWWGG 2 cut(s) 107, 253
EcoT22I ATGCAT 1 cut(s) 239
EcoT38I GRGCYC 1 cut(s) 285
EgeI GGCGCC 1 cut(s) 544
EheI GGCGCC 1 cut(s) 544
ErhI CCWWGG 2 cut(s) 107, 253
Esp3I CGTCTC 1 cut(s) 93
FaeI CATG 9 cut(s) 237, 388, 590, 820, 832, 1231, 1291, 1364, 1379
FaqI GGGAC 1 cut(s) 806
FatI CATG 9 cut(s) 233, 384, 586, 816, 828, 1227, 1287, 1360, 1375
FauI CCCGC 3 cut(s) 1015, 1167, 1363
Fnu4HI GCNGC 6 cut(s) 135, 188, 333, 401, 632, 1278
FokI GGATG 7 cut(s) 461, 781, 1007, 1039, 1067, 1509, 1574
FriOI GRGCYC 1 cut(s) 285
Fsp4HI GCNGC 6 cut(s) 135, 188, 333, 401, 632, 1278
FspBI CTAG 3 cut(s) 636, 1260, 1334
GlaI GCGC 4 cut(s) 422, 544, 630, 892
GluI GCNGC 6 cut(s) 135, 188, 333, 401, 632, 1278
GsaI CCCAGC 2 cut(s) 187, 1561
GsuI CTGGAG 1 cut(s) 75
HaeII RGCGCY 3 cut(s) 546, 632, 894
HaeIII GGCC 5 cut(s) 48, 360, 650, 702, 936
HapII CCGG 4 cut(s) 461, 540, 960, 992
HgaI GACGC 2 cut(s) 278, 383
HhaI GCGC 4 cut(s) 423, 545, 631, 893
Hin1I GRCGYC 3 cut(s) 270, 375, 543
Hin1II CATG 9 cut(s) 237, 388, 590, 820, 832, 1231, 1291, 1364, 1379
Hin6I GCGC 4 cut(s) 421, 543, 629, 891
HinP1I GCGC 4 cut(s) 421, 543, 629, 891
HincII GTYRAC 1 cut(s) 165
HindII GTYRAC 1 cut(s) 165
HindIII AAGCTT 2 cut(s) 96, 983
HinfI GANTC 2 cut(s) 1192, 1300
HpaII CCGG 4 cut(s) 461, 540, 960, 992
HphI GGTGA 1 cut(s) 1436
Hpy166II GTNNAC 6 cut(s) 165, 199, 524, 688, 1060, 1309
Hpy188I TCNGA 5 cut(s) 55, 352, 448, 841, 1299
Hpy188III TCNNGA 4 cut(s) 92, 784, 992, 1474
Hpy8I GTNNAC 6 cut(s) 165, 199, 524, 688, 1060, 1309
Hpy99I CGWCG 1 cut(s) 377
HpyAV CCTTC 6 cut(s) 295, 301, 322, 609, 1251, 1427
HpyCH4III ACNGT 4 cut(s) 148, 665, 972, 1410
HpyCH4IV ACGT 3 cut(s) 795, 1121, 1550
HpyCH4V TGCA 9 cut(s) 237, 524, 764, 816, 1212, 1255, 1277, 1467, 1506
HpyF10VI GCNNNNNNNGC 5 cut(s) 131, 406, 466, 1376, 1563
HpyF3I CTNAG 5 cut(s) 465, 527, 645, 879, 1515
HpySE526I ACGT 3 cut(s) 795, 1121, 1550
Hsp92I GRCGYC 3 cut(s) 270, 375, 543
Hsp92II CATG 9 cut(s) 237, 388, 590, 820, 832, 1231, 1291, 1364, 1379
HspAI GCGC 4 cut(s) 421, 543, 629, 891
KasI GGCGCC 1 cut(s) 542
Kpn2I TCCGGA 1 cut(s) 991
KroI GCCGGC 2 cut(s) 460, 539
KroNI GCCGGC 2 cut(s) 462, 541
Kzo9I GATC 4 cut(s) 4, 175, 337, 786
LmnI GCTCC 3 cut(s) 117, 478, 1531
Lsp1109I GCAGC 3 cut(s) 199, 412, 1289
LweI GCATC 3 cut(s) 1221, 1430, 1531
MaeI CTAG 3 cut(s) 636, 1260, 1334
MaeII ACGT 3 cut(s) 795, 1121, 1550
MaeIII GTNAC 3 cut(s) 1031, 1147, 1424
MalI GATC 4 cut(s) 6, 177, 339, 788
MboI GATC 4 cut(s) 4, 175, 337, 786
MboII GAAGA 7 cut(s) 278, 526, 559, 608, 1081, 1084, 1354
MflI RGATCY 2 cut(s) 4, 786
MhlI GDGCHC 2 cut(s) 285, 526
MlsI TGGCCA 2 cut(s) 702, 936
MluCI AATT 6 cut(s) 19, 76, 802, 1267, 1325, 1390
MluNI TGGCCA 2 cut(s) 702, 936
Mly113I GGCGCC 1 cut(s) 543
Mox20I TGGCCA 2 cut(s) 702, 936
Mph1103I ATGCAT 1 cut(s) 239
MroI TCCGGA 1 cut(s) 991
MroNI GCCGGC 2 cut(s) 460, 539
MscI TGGCCA 2 cut(s) 702, 936
MseI TTAA 5 cut(s) 849, 981, 987, 1206, 1572
MslI CAYNNNNRTG 1 cut(s) 1101
Msp20I TGGCCA 2 cut(s) 702, 936
MspA1I CMGCKG 1 cut(s) 229
MspI CCGG 4 cut(s) 461, 540, 960, 992
MwoI GCNNNNNNNGC 5 cut(s) 131, 406, 466, 1376, 1563
NaeI GCCGGC 2 cut(s) 462, 541
NarI GGCGCC 1 cut(s) 543
NdeII GATC 4 cut(s) 4, 175, 337, 786
NgoMIV GCCGGC 2 cut(s) 460, 539
NlaIII CATG 9 cut(s) 237, 388, 590, 820, 832, 1231, 1291, 1364, 1379
NlaIV GGNNCC 3 cut(s) 113, 538, 544
NmeAIII GCCGAG 1 cut(s) 520
NmuCI GTSAC 2 cut(s) 1031, 1424
NsiI ATGCAT 1 cut(s) 239
NspI RCATGY 3 cut(s) 1231, 1364, 1379
NspV TTCGAA 2 cut(s) 570, 1265
PaeI GCATGC 1 cut(s) 1379
PciI ACATGT 1 cut(s) 1227
PcsI WCGNNNNNNNCGW 2 cut(s) 276, 294
PdiI GCCGGC 2 cut(s) 462, 541
PfeI GAWTC 2 cut(s) 1192, 1300
PflFI GACNNNGTC 1 cut(s) 160
PkrI GCNGC 6 cut(s) 136, 189, 334, 402, 633, 1279
PluTI GGCGCC 1 cut(s) 546
PscI ACATGT 1 cut(s) 1227
PspFI CCCAGC 2 cut(s) 183, 1557
PspN4I GGNNCC 3 cut(s) 113, 538, 544
PspPI GGNCC 3 cut(s) 46, 58, 685
PstI CTGCAG 1 cut(s) 766
PstNI CAGNNNCTG 1 cut(s) 932
PsuI RGATCY 2 cut(s) 4, 786
PsyI GACNNNGTC 1 cut(s) 160
PvuII CAGCTG 1 cut(s) 229
RsaI GTAC 6 cut(s) 305, 389, 396, 662, 917, 969
RsaNI GTAC 6 cut(s) 304, 388, 395, 661, 916, 968
RseI CAYNNNNRTG 1 cut(s) 1101
SaqAI TTAA 5 cut(s) 849, 981, 987, 1206, 1572
SatI GCNGC 6 cut(s) 135, 188, 333, 401, 632, 1278
Sau3AI GATC 4 cut(s) 4, 175, 337, 786
Sau96I GGNCC 3 cut(s) 46, 58, 685
ScaI AGTACT 2 cut(s) 662, 917
SduI GDGCHC 2 cut(s) 285, 526
SfaNI GCATC 3 cut(s) 1221, 1430, 1531
SfcI CTRYAG 1 cut(s) 762
SfoI GGCGCC 1 cut(s) 544
SfuI TTCGAA 2 cut(s) 570, 1265
SinI GGWCC 2 cut(s) 58, 685
SmiMI CAYNNNNRTG 1 cut(s) 1101
SphI GCATGC 1 cut(s) 1379
Sse9I AATT 6 cut(s) 19, 76, 802, 1267, 1325, 1390
SspDI GGCGCC 1 cut(s) 542
SspI AATATT 1 cut(s) 503
SspMI CTAG 3 cut(s) 636, 1260, 1334
StyI CCWWGG 2 cut(s) 107, 253
TaaI ACNGT 4 cut(s) 148, 665, 972, 1410
TaiI ACGT 3 cut(s) 798, 1124, 1553
TaqI TCGA 6 cut(s) 174, 279, 570, 956, 1265, 1438
TasI AATT 6 cut(s) 19, 76, 802, 1267, 1325, 1390
TatI WGTACW 4 cut(s) 303, 387, 660, 915
TauI GCSGC 3 cut(s) 137, 335, 634
TfiI GAWTC 2 cut(s) 1192, 1300
Tru1I TTAA 5 cut(s) 849, 981, 987, 1206, 1572
Tru9I TTAA 5 cut(s) 849, 981, 987, 1206, 1572
TscAI CASTG 5 cut(s) 531, 1055, 1222, 1321, 1513
TseFI GTSAC 2 cut(s) 1031, 1424
TseI GCWGC 3 cut(s) 187, 400, 1277
Tsp45I GTSAC 2 cut(s) 1031, 1424
TspDTI ATGAA 1 cut(s) 575
TspGWI ACGGA 1 cut(s) 488
TspRI CASTG 5 cut(s) 531, 1055, 1222, 1321, 1513
Tth111I GACNNNGTC 1 cut(s) 160
VneI GTGCAC 1 cut(s) 522
VpaK11BI GGWCC 2 cut(s) 58, 685
XapI RAATTY 2 cut(s) 1325, 1390
XceI RCATGY 3 cut(s) 1231, 1364, 1379
XcmI CCANNNNNNNNNTGG 1 cut(s) 695
XspI CTAG 3 cut(s) 636, 1260, 1334
ZrmI AGTACT 2 cut(s) 662, 917
Zsp2I ATGCAT 1 cut(s) 239
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.