Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002013

Physical Location & Seq

Genomic Coordinates Reverse (-)

8563510 .. 8570580

Gene Structure 7071 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G24190.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3993 bp

ATGGTTGGAGGAGGAAGTGCTCAGAAGCTAACTACAAACGACGCTCTTGCATATCTTAAAGCCGTGAAGGACAAATTTCAGGATCAACGTGGAAAATATGACGAGTTTCTCGAGGTTATGAAGAATTTTAAATCTCAAAGAGTTGATACAGCTGGTGTGATAACTAGGGTAAAAGAACTTTTCAAAGGACACCAAGAGTTGATTTTGGGGTTTAATACTTTCTTGCCTAAGGGTTTTGAGATCACACTTCAACCTGAGGATGGACAACCTCCACTGAAGAAACGTGTTGAGTTTGAGGAAGCTATTAGCTTTGTTAACAAGATTAAGACAAGGTTTCAGGGAGATGATCGTGTATACAAATCATTTTTAGACATTTTAAACATGTACAGAAGGGATAGCAAGTCCATCACTGAGGTCTACCAGGAGGTTGCGATCCTATTTCGGGATCATTCAGATCTGCTCGTGGAGTTTACTCACTTTCTACCTGATACTTCAGCAACGGCCTCTATTCCATCTGTTAAAACTTCAGTTCGTGAGAGAGGGGTTTCTCTGGCTGATAAGAAGGACCGGATCATTACTCCACATCCTGACCATGACTATGGTACTGAACATATTGACCAGGACCGGGAGAGACCTATTAAGAAAGAAAATAAAGAACACATGAGAGGTACTAACAAAGAAAATGAGCATAGGGATGCCAGAGATTTCGAACCACATAGCAAAAAAGAGCAATTTCTCAACAAGAAGCAGAAACTACATATTAGAGGCGATGATCCTGCTGAAATTTCCAATCAAAGTAAACTTTCTGGAGCGGTTCCTAGTTCATCTACTTATGATGAAAAAGGTGCCATGAAAAGTTACAGTCAAGATCTAGCTATTGTCGATAGAGTAAAGGAAAAGCTTAACGCCTCAGAGTACCAGGAGTTTTTACGTTGTCTTAATCTCTTTTCAAAAGAGATAATCAGCCGACCAGAACTGCAATCTTTGGTAGGGAATTTAATCGGAGTATATCCTGACCTCATGGATTCCTTTATAGAGTTTTTGGTGCAATGTGAAAAGAATGAAGGACTGCTCTCTGGTATTCTGACTAAGAGTAAGTCTACTTATCTTTTGCAAGGTGAAGGCAAATATCCTCAACCGTCACTGGACAATGATAGAGACCAGGAACATAAGAGAGATGACGGGCTTAGAGATAGAGATCATGAAAAGGAAAGGCTTGAAAAAGCAGCTGCAAATCTGAAATGGGCAAAGCCAATCAGTGAACTAGATCTCTCGAACTGTGAACAATGCACTCCTAGTTATCGGTTACTTCCAAAGAATTACCCAATTTCTATTGCAAGCCAGAAGACAGAGATCGGTAAACTGGTTCTTAATGATCACTGGGTCTCCGTCACATCAGGAAGTGAAGATTATTCATTTAGCCACATGCGTAAGAACCAGTATGAAGAGAGCCTCTTCAAATGTGAGGATGACAGGTTTGAGCTGGACATGCTATTAGAGTCTGTAAATTCAACGACAAAGCATGTGGAAGAATTATTGACAAAAATTAACAGTAATGAACTGAAAACCAACAGTCCCATCCGTGTCGAGGATCACCTCACAGCTCTAAACTTAAGATGCATAGAACGGTTGTATGGTGATCACGGGCTCGATGTGATGGATGTGCTGAAGAAGAACGTGTCTCTTGCTTTACCTGTTATCCTAACACGTTTGAAACAGAAGCAAGAAGAGTGGGCAAGGTGTCGTTCTGATTTTGACAAAGTCTGGGCTGAGATATATGCTAAGAATTACTACAAGTCGCTTGATCATCGAAGTTTCTACTTCAAACAGCAGGATTCAAAGAAGCTGAGCATGAAAGCATTGTTGGCAGAGATAAAAGAGATTACTGAAAAGAAGCGAGAGGATGATTCACTTCTTGCATTTGCAGCCGGAAATAGACTATCCATTTCCCCAGATTTGGAGTTTGATTATCCGGATCATGACCTTCATGAAGATCTTTACCAGCTGATCAAATATTCGTGTGCAGAAATGTGCTCTACCGAACAGTTAGATAAGGTAATGAAGATTTGGACAACTTTCGTGGAACAAATATTTGGTGTTCCTTCTCGCCCTCAAGGTGCTGAAGACCAAGAAGACGTTGTCAAGTCCATGAACCAGAATGTAAAGAGCGGTAGTTCAAGTGCTGGCGAGAGTGAGGGAAGTCCTCACAATTACGCTAGTGTTGCCGACTCTAGACGCTCAAAGTCATCTCGAAAAGCTAATGAACATAGTCAGTTGGGGCAAACTAGTAATTCGGAGAGGGATGGCGCCGCTGGTAGGACATCAGATGCCTTATGTGAGACTGCTCAGCATGAGAAAATGCTGAAGAATGTAGTTACGTCTGATGAAAAGCCTGAAAGCAAGCAAGCTGTTTCTATTGAGCGTGCACACGATTCAACTGCTCTCGCTGTGGATGGATTATTAGATCAAAGTAATGGAGGAAGCAGTATAGTACACATGACCGGACATTGCAATAATAATCTGAAGCCTGTGACCTGTGGAACAGAGTTGGAGTTGAAAATGAATGATGGTAATGGGCCAAAATTAGAGGTTGGTAACAAGAAGTTATTGACAAATGGGATCGCGGTAGAAATAACAAGTGACCAAGAGATGGCAGGAACATCCAAAGTTGAAAGAGAAGAAGGTGAACTTTCTCCAAATGGAGACTTTGAGGAAGATAATTTTGCAGTTTATGCAAAAACTGATTTTGAGACCTTCAGCAAAGCGAATGATAGTACTGGAAATAACATTAGCGGAGATAGAAGTAGAGAAGGGGAACCATCTTGTCTGGAGACAAGGGCTGAGAATGACGCTGAAGGTGACGAAAACGCCGCAAGATCATCAGAGGACAGCAGAAATGAATATGAGAACGGTGATGTTTCTGGAACGGAATCTGGTGGTGGTGAAGATCCGGAGGATGATTTGGATAACAATAACAAAGGAGAAAGCGAAGGTGAGGCTGAATGTATGGCTGATGCACATGATGCTGAAGAAAATGGGTCTGCCTTACCCGTTTCAGCACGATTCTTGCTGCATGTAAAGCCCTTAGTAAAGTATGTTCCTTCAGCTATAGCTTTGCATGACAAGGACAAAGACTCTCTGAAGAACTCCCAAGTTTTCTATGGAAATGATTCGTTTTACGTGCTTTTCAGGCTGCACCGGATATTGTATGAGAGAATACTATCAGCAAAAGTTAACTCATCATCCCCGGAAGGAAAGTGGAGGACCTCAAATACCAAAAATCCTACTGATTCCTATGCTAGATTCATGACTGCACTCTACAACTTACTTGATGGTACATCTGATAATGCCAAGTTTGAAGATGACTGCCGAGCGATAATCGGGACTCAGTCTTATATTCTCTTCACATTGGACAAACTGATCCATAAATTCATCAAGCATCTACAAGTAGTAGTAGCTGATGAGATGGACAACAAGCTTCTTCAGCTTTATTTTTATGAGAAATCCAGAAGGCCTGAAACGATTTTTGATGCTGTGTATTACGATAATACCCGTGTCCTCCTCCCTGATGAGAATATTTACCGTATTGAATGTAGATTATCAACCCCAGCGAAACTCTCTATTCAGCTTATGTGCAACGGTCTTGATAAGCCCGATGTGACATCTGTATCCATTGACCCGACCTTTGCAGCTTATCTCCACAATGACTTCCTCTCCATACAACCAAATGCAAGGGAGGATCGCAGAATCTATTTAAATAGGAACAAGCGCAAAGTTTGTCGTGAAGATGAACAGTTATACAGCACAGATGAAGTTAAGATCAAAAATGGTTTGGAGTGTAAGATAGCTTGCGGTTCTTCAAAGGTCTCCTATGTACTAGAAACAGAAGATTTGTTGGTGCGAGTTAAAAAGAGAAGAAAAACTTTGTGCCACAATCAGGATTCTTGGGTAAGGCAAATGAGGTTACAATATTACAAAAATAACTTCTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000118 GO:0000122 GO:0000785 GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006476 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016575 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0033993 GO:0035601 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0097305 GO:0098732 GO:1901564 GO:1901700 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04139 ko04919 ko05016 ko05202 map04139 map04919 map05016 map05202

Pfam Domains

Protein Families

PAH Sin3_corepress Sin3a_C

Protein Analysis

1330

Amino Acids

151.2

Weight (kDa)

5.47

Isoelectric Point (pI)

42.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAH	PF02671	32 - 75	6.8e-18	Paired amphipathic helix repeat
PAH	PF02671	118 - 161	2.6e-16	Paired amphipathic helix repeat
PAH	PF02671	306 - 348	1e-12	Paired amphipathic helix repeat
Sin3_corepress	PF08295	424 - 516	1.5e-34	Sin3 family co-repressor
Sin3a_C	PF16879	1049 - 1295	3.3e-42	C-terminal domain of Sin3a protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0002013)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24190 AT1G24190 AT1G24190 AT1G70060 AT1G70060
fragaria_vesca	FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300
malus_domestica	MD13G1084700.v1.1 MD16G1083700.v1.1
prunus_persica	Prupe.1G262300_v2.0.a1 Prupe.1G262300_v2.0.a1 Prupe.1G262300_v2.0.a1 Prupe.1G262300_v2.0.a1
pyrus_communis	pycom13g07320 pycom16g07260
rosa_chinensis	RchiOBHm_Chr4g0444901
rosa_laevigata	RLG00000005790
rosa_multiflora	Rmu_sc0006845.1_g000002 Rmu_sc0013783.1_g000004
rosa_roxburghii	Rroxscaffold_5G00385400
rosa_rugosa	Rorug04G0355800 Rorug04G0355900.1 Rorug04G0356000 Rorug04G0356100
rosa_samantha	Rh4AG417700 Rh4BG429500 Rh4CG444200 Rh4DG425400
rosa_wichuraiana	Rw4G035800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	845, 2306
AccB7I	CCANNNNNTGG	1 cut(s)	2650
AccBSI	CCGCTC	2 cut(s)	812, 2169
AccI	GTMKAC	3 cut(s)	354, 417, 1100
AccII	CGCG	1 cut(s)	2624
AccIII	TCCGGA	2 cut(s)	1972, 2950
AciI	CCGC	7 cut(s)	812, 2169, 2310, 2624, 2793, 2871, 3852
AcsI	RAATTY	6 cut(s)	74, 124, 783, 994, 1507, 3428
AcyI	GRCGYC	1 cut(s)	2307
AfaI	GTAC	8 cut(s)	386, 604, 670, 917, 2493, 2776, 3337, 3876
AfiI	CCNNNNNNNGG	8 cut(s)	260, 442, 625, 1588, 1957, 2316, 2650, 3937
AflII	CTTAAG	1 cut(s)	1612
AflIII	ACRYGT	4 cut(s)	283, 381, 1677, 1706
AhlI	ACTAGT	1 cut(s)	2285
AjnI	CCWGG	4 cut(s)	420, 618, 918, 1161
AjuI	GAANNNNNNNTTGG	4 cut(s)	1847, 1879, 2076, 2108
Alw21I	GWGCWC	3 cut(s)	22, 2036, 2428
Alw26I	GTCTC	9 cut(s)	625, 1152, 1390, 1686, 2333, 2697, 2744, 2825, 3871
Alw44I	GTGCAC	1 cut(s)	2424
Ama87I	CYCGRG	1 cut(s)	110
Aor13HI	TCCGGA	2 cut(s)	1972, 2950
AoxI	GGCC	3 cut(s)	501, 2576, 3512
ApaLI	GTGCAC	1 cut(s)	2424
ApeKI	GCWGC	6 cut(s)	1226, 1229, 1925, 3070, 3193, 3689
ApoI	RAATTY	6 cut(s)	74, 124, 783, 994, 1507, 3428
ArsI	GACNNNNNNTTYG	2 cut(s)	3668, 3700
Asp700I	GAANNNNTTC	1 cut(s)	3169
AspLEI	GCGC	2 cut(s)	2309, 3771
AspS9I	GGNCC	4 cut(s)	565, 622, 2576, 3264
AsuC2I	CCSGG	2 cut(s)	626, 3248
AsuHPI	GGTGA	8 cut(s)	1130, 1586, 1649, 2696, 2870, 2924, 2954, 3005
AsuII	TTCGAA	1 cut(s)	708
AvaI	CYCGRG	1 cut(s)	110
AvaII	GGWCC	3 cut(s)	565, 622, 3264
AxyI	CCTNAGG	2 cut(s)	228, 255
BaeGI	GKGCMC	1 cut(s)	2428
BaeI	ACNNNNGTAYC	2 cut(s)	3651, 3684
BanI	GGYRCC	2 cut(s)	845, 2306
BanII	GRGCYC	1 cut(s)	1650
BauI	CACGAG	1 cut(s)	461
BbsI	GAAGAC	3 cut(s)	1352, 2130, 2139
Bbv12I	GWGCWC	3 cut(s)	22, 2036, 2428
BbvI	GCAGC	6 cut(s)	1216, 1238, 1937, 3057, 3180, 3701
BceAI	ACGGC	2 cut(s)	47, 516
BcgI	CGANNNNNNTGC	6 cut(s)	29, 63, 758, 792, 2420, 2454
BciT130I	CCWGG	4 cut(s)	422, 620, 920, 1163
BciVI	GTATCC	1 cut(s)	3679
BclI	TGATCA	4 cut(s)	1375, 1639, 1804, 2007
BcnI	CCSGG	2 cut(s)	626, 3248
BcoDI	GTCTC	9 cut(s)	625, 1152, 1390, 1686, 2333, 2697, 2744, 2825, 3871
BcuI	ACTAGT	1 cut(s)	2285
BfmI	CTRYAG	1 cut(s)	3108
BfoI	RGCGCY	1 cut(s)	2310
BfrI	CTTAAG	1 cut(s)	1612
BfuI	GTATCC	1 cut(s)	3679
BglII	AGATCT	4 cut(s)	454, 868, 1267, 1993
BisI	GCNGC	8 cut(s)	1227, 1230, 1926, 2310, 2871, 3071, 3194, 3690
BlpI	GCTNAGC	2 cut(s)	1847, 2346
BlsI	GCNGC	8 cut(s)	1228, 1231, 1927, 2311, 2872, 3072, 3195, 3691
BmcAI	AGTACT	1 cut(s)	2776
Bme1390I	CCNGG	6 cut(s)	422, 620, 626, 920, 1163, 3248
Bme18I	GGWCC	3 cut(s)	565, 622, 3264
BmeT110I	CYCGRG	1 cut(s)	110
BmgT120I	GGNCC	4 cut(s)	565, 622, 2576, 3264
BmiI	GGNNCC	4 cut(s)	816, 847, 2308, 2817
BmrFI	CCNGG	6 cut(s)	422, 620, 626, 920, 1163, 3248
BmrI	ACTGGG	1 cut(s)	1390
BmsI	GCATC	7 cut(s)	685, 1607, 2317, 3004, 3013, 3448, 3520
BmuI	ACTGGG	1 cut(s)	1390
BpiI	GAAGAC	3 cut(s)	1352, 2130, 2139
BpmI	CTGGAG	2 cut(s)	828, 2849
Bpu1102I	GCTNAGC	2 cut(s)	1847, 2346
Bpu14I	TTCGAA	1 cut(s)	708
BpuEI	CTTGAG	1 cut(s)	2097
BpuMI	CCSGG	2 cut(s)	626, 3248
BsaAI	YACGTR	1 cut(s)	3181
BsaBI	GATNNNNATC	1 cut(s)	1197
BsaHI	GRCGYC	1 cut(s)	2307
BsaI	GGTCTC	5 cut(s)	625, 1152, 1390, 2744, 3871
BsaJI	CCNNGG	1 cut(s)	3246
BsaWI	WCCGGW	5 cut(s)	567, 1972, 2501, 2950, 3198
BsaXI	ACNNNNNCTCC	4 cut(s)	1370, 1400, 3698, 3728
Bsc4I	CCNNNNNNNGG	8 cut(s)	260, 442, 625, 1588, 1957, 2316, 2650, 3937
Bse1I	ACTGG	5 cut(s)	1149, 1368, 1385, 1438, 2782
Bse21I	CCTNAGG	2 cut(s)	228, 255
Bse3DI	GCAATG	2 cut(s)	1055, 2506
Bse8I	GATNNNNATC	1 cut(s)	1197
BseAI	TCCGGA	2 cut(s)	1972, 2950
BseBI	CCWGG	4 cut(s)	422, 620, 920, 1163
BseDI	CCNNGG	1 cut(s)	3246
BseJI	GATNNNNATC	1 cut(s)	1197
BseLI	CCNNNNNNNGG	8 cut(s)	260, 442, 625, 1588, 1957, 2316, 2650, 3937
BseMI	GCAATG	2 cut(s)	1055, 2506
BseMII	CTCAG	9 cut(s)	35, 246, 402, 924, 1761, 1838, 2360, 2832, 3401
BseNI	ACTGG	5 cut(s)	1149, 1368, 1385, 1438, 2782
BseRI	GAGGAG	2 cut(s)	24, 3551
BseSI	GKGCMC	1 cut(s)	2428
BseXI	GCAGC	6 cut(s)	1216, 1238, 1937, 3057, 3180, 3701
BseYI	CCCAGC	1 cut(s)	3607
BsgI	GTGCAG	3 cut(s)	2043, 3179, 3297
Bsh1236I	CGCG	1 cut(s)	2624
BshFI	GGCC	3 cut(s)	503, 2578, 3514
BshNI	GGYRCC	2 cut(s)	845, 2306
BsiHKAI	GWGCWC	3 cut(s)	22, 2036, 2428
BsiHKCI	CYCGRG	1 cut(s)	110
BsiSI	CCGG	8 cut(s)	568, 625, 1929, 1973, 2502, 2951, 3199, 3248
BslFI	GGGAC	2 cut(s)	1560, 3397
BslI	CCNNNNNNNGG	8 cut(s)	260, 442, 625, 1588, 1957, 2316, 2650, 3937
BsmAI	GTCTC	9 cut(s)	625, 1152, 1390, 1686, 2333, 2697, 2744, 2825, 3871
BsmFI	GGGAC	2 cut(s)	1560, 3397
BsnI	GGCC	3 cut(s)	503, 2578, 3514
Bso31I	GGTCTC	5 cut(s)	625, 1152, 1390, 2744, 3871
BsoBI	CYCGRG	1 cut(s)	110
Bsp119I	TTCGAA	1 cut(s)	708
Bsp1286I	GDGCHC	4 cut(s)	22, 1650, 2036, 2428
Bsp13I	TCCGGA	2 cut(s)	1972, 2950
Bsp1407I	TGTACA	1 cut(s)	384
Bsp1720I	GCTNAGC	2 cut(s)	1847, 2346
BspACI	CCGC	7 cut(s)	812, 2169, 2310, 2624, 2793, 2871, 3852
BspANI	GGCC	3 cut(s)	503, 2578, 3514
BspCNI	CTCAG	9 cut(s)	34, 247, 403, 923, 1762, 1839, 2359, 2833, 3400
BspEI	TCCGGA	2 cut(s)	1972, 2950
BspFNI	CGCG	1 cut(s)	2624
BspHI	TCATGA	4 cut(s)	1201, 1978, 1987, 3306
BspLI	GGNNCC	4 cut(s)	816, 847, 2308, 2817
BspT104I	TTCGAA	1 cut(s)	708
BspT107I	GGYRCC	2 cut(s)	845, 2306
BspTI	CTTAAG	1 cut(s)	1612
BspTNI	GGTCTC	5 cut(s)	625, 1152, 1390, 2744, 3871
BsrBI	CCGCTC	2 cut(s)	812, 2169
BsrDI	GCAATG	2 cut(s)	1055, 2506
BsrGI	TGTACA	1 cut(s)	384
BsrI	ACTGG	5 cut(s)	1149, 1368, 1385, 1438, 2782
BssECI	CCNNGG	1 cut(s)	3246
BssNAI	GTATAC	1 cut(s)	355
BssNI	GRCGYC	1 cut(s)	2307
BssSI	CACGAG	1 cut(s)	461
Bst1107I	GTATAC	1 cut(s)	355
Bst2BI	CACGAG	1 cut(s)	461
Bst2UI	CCWGG	4 cut(s)	422, 620, 920, 1163
Bst6I	CTCTTC	4 cut(s)	1440, 1460, 1722, 3407
BstACI	GRCGYC	1 cut(s)	2307
BstAFI	CTTAAG	1 cut(s)	1612
BstAPI	GCANNNNNTGC	2 cut(s)	2732, 3023
BstAUI	TGTACA	1 cut(s)	384
BstBAI	YACGTR	1 cut(s)	3181
BstBI	TTCGAA	1 cut(s)	708
BstC8I	GCNNGC	6 cut(s)	1339, 2185, 2402, 2406, 2424, 3850
BstFNI	CGCG	1 cut(s)	2624
BstH2I	RGCGCY	1 cut(s)	2310
BstHHI	GCGC	2 cut(s)	2309, 3771
BstMAI	GTCTC	9 cut(s)	625, 1152, 1390, 1686, 2333, 2697, 2744, 2825, 3871
BstMWI	GCNNNNNNNGC	9 cut(s)	1489, 1865, 1925, 2222, 2732, 3023, 3079, 3190, 3484
BstNI	CCWGG	4 cut(s)	422, 620, 920, 1163
BstNSI	RCATGY	5 cut(s)	385, 1429, 1492, 1526, 3077
BstSCI	CCNGG	6 cut(s)	420, 618, 624, 918, 1161, 3246
BstSFI	CTRYAG	1 cut(s)	3108
BstSLI	GKGCMC	1 cut(s)	2428
BstUI	CGCG	1 cut(s)	2624
BstV1I	GCAGC	6 cut(s)	1216, 1238, 1937, 3057, 3180, 3701
BstV2I	GAAGAC	3 cut(s)	1352, 2130, 2139
BstX2I	RGATCY	5 cut(s)	454, 868, 1267, 1993, 2947
BstXI	CCANNNNNNTGG	1 cut(s)	599
BstYI	RGATCY	5 cut(s)	454, 868, 1267, 1993, 2947
BstZ17I	GTATAC	1 cut(s)	355
Bsu36I	CCTNAGG	2 cut(s)	228, 255
BsuI	GTATCC	1 cut(s)	3679
BsuRI	GGCC	3 cut(s)	503, 2578, 3514
BtgZI	GCGATG	1 cut(s)	783
BtsIMutI	CAGTG	5 cut(s)	272, 408, 1142, 1264, 1378
Cac8I	GCNNGC	6 cut(s)	1339, 2185, 2402, 2406, 2424, 3850
CciI	TCATGA	4 cut(s)	1201, 1978, 1987, 3306
CfoI	GCGC	2 cut(s)	2309, 3771
Cfr13I	GGNCC	4 cut(s)	565, 622, 2576, 3264
CseI	GACGC	3 cut(s)	50, 2244, 2858
Csp6I	GTAC	8 cut(s)	385, 603, 669, 916, 2492, 2775, 3336, 3875
CspCI	CAANNNNNGTGG	6 cut(s)	1506, 1541, 1712, 1747, 2061, 2096
CviQI	GTAC	8 cut(s)	385, 603, 669, 916, 2492, 2775, 3336, 3875
DinI	GGCGCC	1 cut(s)	2308
DraI	TTTAAA	3 cut(s)	130, 378, 3756
Eam1104I	CTCTTC	4 cut(s)	1440, 1460, 1722, 3407
EarI	CTCTTC	4 cut(s)	1440, 1460, 1722, 3407
Eco147I	AGGCCT	1 cut(s)	3514
Eco24I	GRGCYC	1 cut(s)	1650
Eco31I	GGTCTC	5 cut(s)	625, 1152, 1390, 2744, 3871
Eco47I	GGWCC	3 cut(s)	565, 622, 3264
Eco81I	CCTNAGG	2 cut(s)	228, 255
Eco88I	CYCGRG	1 cut(s)	110
EcoO109I	RGGNCCY	1 cut(s)	3264
EcoRII	CCWGG	4 cut(s)	420, 618, 918, 1161
EcoT22I	ATGCAT	1 cut(s)	1622
EcoT38I	GRGCYC	1 cut(s)	1650
EgeI	GGCGCC	1 cut(s)	2308
EheI	GGCGCC	1 cut(s)	2308
FalI	AAGNNNNNCTT	4 cut(s)	2673, 2705, 3907, 3939
FaqI	GGGAC	2 cut(s)	1560, 3397
FbaI	TGATCA	4 cut(s)	1375, 1639, 1804, 2007
FblI	GTMKAC	3 cut(s)	354, 417, 1100
Fnu4HI	GCNGC	8 cut(s)	1227, 1230, 1926, 2310, 2871, 3071, 3194, 3690
FriOI	GRGCYC	1 cut(s)	1650
Fsp4HI	GCNGC	8 cut(s)	1227, 1230, 1926, 2310, 2871, 3071, 3194, 3690
GlaI	GCGC	2 cut(s)	2308, 3770
GluI	GCNGC	8 cut(s)	1227, 1230, 1926, 2310, 2871, 3071, 3194, 3690
GsaI	CCCAGC	1 cut(s)	3611
GsuI	CTGGAG	2 cut(s)	828, 2849
HaeII	RGCGCY	1 cut(s)	2310
HaeIII	GGCC	3 cut(s)	503, 2578, 3514
HapII	CCGG	8 cut(s)	568, 625, 1929, 1973, 2502, 2951, 3199, 3248
HgaI	GACGC	3 cut(s)	50, 2244, 2858
HhaI	GCGC	2 cut(s)	2309, 3771
Hin1I	GRCGYC	1 cut(s)	2307
Hin6I	GCGC	2 cut(s)	2307, 3769
HinP1I	GCGC	2 cut(s)	2307, 3769
HincII	GTYRAC	2 cut(s)	316, 3235
HindII	GTYRAC	2 cut(s)	316, 3235
HindIII	AAGCTT	2 cut(s)	899, 3476
HpaI	GTTAAC	2 cut(s)	316, 3235
HpaII	CCGG	8 cut(s)	568, 625, 1929, 1973, 2502, 2951, 3199, 3248
HphI	GGTGA	8 cut(s)	1130, 1586, 1649, 2696, 2870, 2924, 2954, 3005
Hpy99I	CGWCG	1 cut(s)	44
HpyCH4IV	ACGT	8 cut(s)	88, 283, 931, 1677, 1708, 2136, 2378, 3180
HpyF10VI	GCNNNNNNNGC	9 cut(s)	1489, 1865, 1925, 2222, 2732, 3023, 3079, 3190, 3484
HpySE526I	ACGT	8 cut(s)	88, 283, 931, 1677, 1708, 2136, 2378, 3180
Hsp92I	GRCGYC	1 cut(s)	2307
HspAI	GCGC	2 cut(s)	2307, 3769
KasI	GGCGCC	1 cut(s)	2306
Kpn2I	TCCGGA	2 cut(s)	1972, 2950
Ksp22I	TGATCA	4 cut(s)	1375, 1639, 1804, 2007
KspAI	GTTAAC	2 cut(s)	316, 3235
LmnI	GCTCC	1 cut(s)	809
Lsp1109I	GCAGC	6 cut(s)	1216, 1238, 1937, 3057, 3180, 3701
LweI	GCATC	7 cut(s)	685, 1607, 2317, 3004, 3013, 3448, 3520
MaeII	ACGT	8 cut(s)	88, 283, 931, 1677, 1708, 2136, 2378, 3180
MbiI	CCGCTC	2 cut(s)	812, 2169
MflI	RGATCY	5 cut(s)	454, 868, 1267, 1993, 2947
MhlI	GDGCHC	4 cut(s)	22, 1650, 2036, 2428
Mly113I	GGCGCC	1 cut(s)	2307
MlyI	GAGTC	4 cut(s)	1508, 2222, 3128, 3379
MmeI	TCCRAC	1 cut(s)	2529
Mph1103I	ATGCAT	1 cut(s)	1622
MroI	TCCGGA	2 cut(s)	1972, 2950
MroXI	GAANNNNTTC	1 cut(s)	3169
MslI	CAYNNNNRTG	2 cut(s)	597, 693
MspA1I	CMGCKG	4 cut(s)	152, 1229, 2005, 2312
MspCI	CTTAAG	1 cut(s)	1612
MspI	CCGG	8 cut(s)	568, 625, 1929, 1973, 2502, 2951, 3199, 3248
MspR9I	CCNGG	6 cut(s)	422, 620, 626, 920, 1163, 3248
MvaI	CCWGG	4 cut(s)	422, 620, 920, 1163
MvnI	CGCG	1 cut(s)	2624
MwoI	GCNNNNNNNGC	9 cut(s)	1489, 1865, 1925, 2222, 2732, 3023, 3079, 3190, 3484
NarI	GGCGCC	1 cut(s)	2307
NciI	CCSGG	2 cut(s)	626, 3248
NlaIV	GGNNCC	4 cut(s)	816, 847, 2308, 2817
NmeAIII	GCCGAG	1 cut(s)	3395
NmuCI	GTSAC	6 cut(s)	1140, 1390, 2530, 2639, 2858, 3658
NsiI	ATGCAT	1 cut(s)	1622
NspI	RCATGY	5 cut(s)	385, 1429, 1492, 1526, 3077
NspV	TTCGAA	1 cut(s)	708
PaeR7I	CTCGAG	1 cut(s)	110
PagI	TCATGA	4 cut(s)	1201, 1978, 1987, 3306
PceI	AGGCCT	1 cut(s)	3514
PciI	ACATGT	1 cut(s)	381
PcsI	WCGNNNNNNNCGW	1 cut(s)	108
PdmI	GAANNNNTTC	1 cut(s)	3169
PflFI	GACNNNGTC	3 cut(s)	1760, 2138, 3388
PflMI	CCANNNNNTGG	1 cut(s)	2650
PkrI	GCNGC	8 cut(s)	1228, 1231, 1927, 2311, 2872, 3072, 3195, 3691
PleI	GAGTC	4 cut(s)	1507, 2222, 3128, 3379
PluTI	GGCGCC	1 cut(s)	2310
PpsI	GAGTC	4 cut(s)	1507, 2222, 3128, 3379
Ppu21I	YACGTR	1 cut(s)	3181
PpuMI	RGGWCCY	1 cut(s)	3264
PscI	ACATGT	1 cut(s)	381
Psp5II	RGGWCCY	1 cut(s)	3264
Psp6I	CCWGG	4 cut(s)	420, 618, 918, 1161
PspFI	CCCAGC	1 cut(s)	3607
PspGI	CCWGG	4 cut(s)	420, 618, 918, 1161
PspN4I	GGNNCC	4 cut(s)	816, 847, 2308, 2817
PspPI	GGNCC	4 cut(s)	565, 622, 2576, 3264
PspPPI	RGGWCCY	1 cut(s)	3264
PsrI	GAACNNNNNNTAC	2 cut(s)	3081, 3113
PsuI	RGATCY	5 cut(s)	454, 868, 1267, 1993, 2947
PsyI	GACNNNGTC	3 cut(s)	1760, 2138, 3388
PvuII	CAGCTG	3 cut(s)	152, 1229, 2005
RsaI	GTAC	8 cut(s)	386, 604, 670, 917, 2493, 2776, 3337, 3876
RsaNI	GTAC	8 cut(s)	385, 603, 669, 916, 2492, 2775, 3336, 3875
RseI	CAYNNNNRTG	2 cut(s)	597, 693
SatI	GCNGC	8 cut(s)	1227, 1230, 1926, 2310, 2871, 3071, 3194, 3690
Sau96I	GGNCC	4 cut(s)	565, 622, 2576, 3264
ScaI	AGTACT	1 cut(s)	2776
SchI	GAGTC	4 cut(s)	1508, 2222, 3128, 3379
ScrFI	CCNGG	6 cut(s)	422, 620, 626, 920, 1163, 3248
SduI	GDGCHC	4 cut(s)	22, 1650, 2036, 2428
SfaNI	GCATC	7 cut(s)	685, 1607, 2317, 3004, 3013, 3448, 3520
SfcI	CTRYAG	1 cut(s)	3108
SfoI	GGCGCC	1 cut(s)	2308
Sfr274I	CTCGAG	1 cut(s)	110
SfuI	TTCGAA	1 cut(s)	708
SinI	GGWCC	3 cut(s)	565, 622, 3264
SlaI	CTCGAG	1 cut(s)	110
SmiI	ATTTAAAT	1 cut(s)	3756
SmiMI	CAYNNNNRTG	2 cut(s)	597, 693
SmlI	CTYRAG	3 cut(s)	110, 1612, 2112
SmoI	CTYRAG	3 cut(s)	110, 1612, 2112
SpeI	ACTAGT	1 cut(s)	2285
SseBI	AGGCCT	1 cut(s)	3514
SsiI	CCGC	7 cut(s)	812, 2169, 2310, 2624, 2793, 2871, 3852
SspDI	GGCGCC	1 cut(s)	2306
SspI	AATATT	4 cut(s)	2015, 2091, 3577, 3971
StuI	AGGCCT	1 cut(s)	3514
StyD4I	CCNGG	6 cut(s)	420, 618, 624, 918, 1161, 3246
SwaI	ATTTAAAT	1 cut(s)	3756
TaiI	ACGT	8 cut(s)	91, 286, 934, 1680, 1711, 2139, 2381, 3183
TaqI	TCGA	8 cut(s)	111, 708, 882, 1274, 1587, 1650, 1810, 2251
TatI	WGTACW	4 cut(s)	384, 2491, 2774, 3874
TauI	GCSGC	2 cut(s)	2312, 2873
TscAI	CASTG	5 cut(s)	279, 415, 1149, 1264, 1385
TseFI	GTSAC	6 cut(s)	1140, 1390, 2530, 2639, 2858, 3658
TseI	GCWGC	6 cut(s)	1226, 1229, 1925, 3070, 3193, 3689
Tsp45I	GTSAC	6 cut(s)	1140, 1390, 2530, 2639, 2858, 3658
TspGWI	ACGGA	3 cut(s)	1378, 1571, 2942
TspRI	CASTG	5 cut(s)	279, 415, 1149, 1264, 1385
Tth111I	GACNNNGTC	3 cut(s)	1760, 2138, 3388
Van91I	CCANNNNNTGG	1 cut(s)	2650
Vha464I	CTTAAG	1 cut(s)	1612
VneI	GTGCAC	1 cut(s)	2424
VpaK11BI	GGWCC	3 cut(s)	565, 622, 3264
XapI	RAATTY	6 cut(s)	74, 124, 783, 994, 1507, 3428
XbaI	TCTAGA	1 cut(s)	2231
XceI	RCATGY	5 cut(s)	385, 1429, 1492, 1526, 3077
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3158
XhoI	CTCGAG	1 cut(s)	110
XmiI	GTMKAC	3 cut(s)	354, 417, 1100
XmnI	GAANNNNTTC	1 cut(s)	3169
ZrmI	AGTACT	1 cut(s)	2776
Zsp2I	ATGCAT	1 cut(s)	1622

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.