Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002013

Physical Location & Seq

Genomic Coordinates Reverse (-)

27084193 .. 27094148

Gene Structure 9956 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G262300.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4341 bp

ATGAAGAGGTCCAGAGAAGACGTTTTTATGACCTCACAACTCAAGCGGCCCATGGTTTCCTCTCGAGGAGAGCCTTCGGGGCAACCCCAGATGATGGGCGGAGCAGCTGCCCAGAAACTAACAACAAGTGATGCCTTAGCATATCTAAAGGCTGTGAAGGATATATTTCAAGACAACAGGGATAAATACGAAGAATTTCTTGAAGTCATGAAAGACTTTAAGGCCCAAAGAATTGACACTGCGGGTGTGATAGAGAGGGTGAAGGATTTATTTAAAGGGCATCGAGAGCTAATATTAGGTTTCAATACCTTCTTGCCAAAGGGATATGAAATCACCCTCCCACTTGAGGACGAGCCACAGCCTCCTCAAAAGAAGCCTGTTGAATTTGAAGAAGCTATCAATTTCGTGAACAAGATTAAGACCCGATTTCAAGGCGATGACCATGTTTATAAATCTTTTTTAGACATTCTGAATATGTACAGAAAGGAAAACAAGTCCATCACAGAGGTTTACCAGGAGGTTGCAGCACTTTTCCAAGAACACTCAGACTTACTTGTGGAGTTTACTCACTTTTTACCTGATACTTCAGGAACAGCCTCCATCCACTTTGCTCCATCACATAGAAACGCAATGCTCCGTGATAGGAGCTCTGCTATGCCCCCTATGCGGCAAATGCATGTTGACAAGAAAGAAAGGACCATGGGTTCTTATGCTGACCACGATCTCAGTGTTGACCGTCCTGATCCTGACCACGATAGAGCTCTGATGAAAGTGGACAAAGAGCAAAGGAGGCGTGGTGAGAAGGAGAAGGAGAGGAGAGAAGATAGAGAAAGACGAGAACGTGACCGGGATGATAGAGATTTCGACCATGATGGCAGTAGGGACTTCAACATGCAACATTTTCCCCACAAACGGAAATCTGCTCGTAGGACTGAAGACTTGGCTACTGAACAATTGCATCCAGGTGGGGAAGGCGATGAAAACTTTGCAGAACATCTCATTTCATCCTCTTATGATGATAAAAATTCTGCCAAAAGTATGTATGGCCAGGAGTTTGCTTACTGTGACAAGGTGAAGGAGAAGTTACGAAATCCTGATGATTACCAGGAATTTCTGAAGTGCCTCCATATTTTTAGCAAGGAAATTATTACGAGATCCGAATTGCAGTCTCTGGTGGGTGATTTACTTGGAAGGTATCCAGATCTTATGGATGGGTTTGATGAATTTTTGGCATGTTGTGAGAAGAAAGATGGGTTCCTTGCTGGTGTCATGAGTAAAAAGTCCTTGTGGAATGAAGGACATTTACCCAGATCAGTGAAGGTAGAGGATAGGGATAGGGATAGGGATAGAGATCGTGAAAGGGATGATGGGGTTAAAGATAGAGAGCGTGAAACACGAGAAAGGGATCGACTTGAGAAAAATGGTGCGTCTGGAAATAAAGAAGTCGGAGGCCAGAAGATTTCTATATTTTCTAGCAAGGATAAATACTTGGCAAAACCTATTAATGAGCTTGACCTCTCTAACTGCGAGCGCTGCACTCCAAGCTATCGTCTCCTTCCAAAGAATTATCCAATACCTTCTGCTAGCCAAAGAACGGAGCTTGCTTCTGAAGTTTTGAATGATCATTGGGTATCCGTCACTTCTGGAAGTGAGGATTACTCTTTTAAACACATGCGCAAAAACCAGTACGAAGAAAGCCTGTTTCGTTGTGAGGATGATAGGTTTGAACTGGATATGTTGTTAGAGTCTGTGAATGTAACGACCAAGCGTGTTGAAGAACTTTTAGAAAAGATCAATAACAATACAATCAAGATGGACAGTCCAATCCGTATTGAAGAACACTTCACAGCTCTGAATCTGAGGTGCATTGAGCGATTATATGGTGACCATGGGCTTGATGTGATGGATGTGTTGAGAAAAAATGGTCCATTAGCTTTGCCTGTTATATTAACCCGTTTGAAGCAAAAGCAAGAAGAGTGGGCAAGGTGTCGTTCTGATTTTAATAAAGTTTGGGCTGATATATATGCCAAGAACTATCACAAGTCACTTGATCATCGTAGCTTCTACTTCAAGCAACAGGACACAAAGAGCTTAAGCACAAAAGCCTTGCTGGCGGAGATTAAAGAGATCAGTGAGAAGAAGCGGAAGGAAGATGACGTTCTTCTCTCAATCGCTGCTGGAAATAGACGACCTATTATTCCCAATTTGGAATTTGAGTACCCTGATCCTGAAATCCATGAAGATCTGTATCAACTCATCAAATATTCTTGTGGAGAAGTTTGCACTACCGAGCAATTGGATAAAGTTATGAAGATATGGACAACCTTCCTTGAACCAATGCTTGGTGTTCCTACTCGGCCTCAAGGTGCAGAAGATACTGAAGATGTAGTGAAAGCGAAAAATCATACTGGCAAACATGGTACTGTGAGTGCGGGAGACACTGATGGCAGTCCTGGTGGCGGTGCTACTGCAACGAATTCCAAACAGTTAAATTCGTCAAGAAATGGAGACGAAAGCATTCAACCTGAACAGTCAAGCTCTTGCAGGACTTGGGCAGTAAATGGGGCCAATGGGGTTAAGGATGAAAGTTCCCTTGACATTGATCGTGCTGCGTGTAAAGGTGATACTTTCTGCAATACCTCTCAACAAGGTAAAGTGCAGAGTAATGCATCTACAGCCGAAGAAACGTCTGGAGTTAGCAAACAAGACAATTCCAATGAAAGATTAGTCAATTCTAATTTATCACCCCCTGGGTTGGAGCAAAGTAATGGAAGAACTAATCAAGAAAACTCATCAGGGCTTAGTCCTACTCCATCCAGACCGGGTAATGGCACTGTTGACGGTGGGCTTGAGTTACCTTCATCAGAGGGTGGTGATTCTACAAGACCTGTTATATCCTCAAATGGAGCAATCGGAGAAGGCACCAAAGGTCTCAGATATCTTGAAGAGTCTGCTAGACACTTCAAGATTGAAAGAGAGGAAGGTGAAATATCTCCAAACGGAGATTTTGAGGAGGATAATTTTGCAAATTACAGAGAAGCTGGTTTGGGGGCTGTCCAAAAACCAAAGGATGGTGTTGTTGGCAGGCAATATCAAGCCAGACATGCGGAAGAAGAAATATGCGGTGGAGAGACAGGGGGAGAAAATGATGCTGATGCTGACGATGAAGGTGAGGAAAGCGCTCAGAGGTCATCAGAGGATAGTGAAAATGCTTCCGAGAATGGTGATGTTTCTGGTAGTGAGTCTGGTGATGGAGAGGAATGTTCTCGTGAAGAGCGTGAGGAAGATGTGGACAATGATGAGCATGATACCAAGGCAGAGAGTGAAGGTGAAGCTGAAGGGATGGCTGATGCCCATGATGTTGAAGGAGACGGAATATCTTTACCGCTTTCAGAACGTTTTCTCCTGACTGTGAAGCCTCTTGCAAAGCATGTTCCTCCAGCTTTACATGACAAGGAGAAGGACTCTAGGGTTTTCTATGGAAATGATTCGTTCTATGTGCTTTTTAGGCTTCACCAAACACTATATGAGAGAATACAGTCGGCAAAGACTAATTCATCATCTGCTGAGAGGAAGTGGCGGGCTTCAAATGATATGAGCCCTTCGGATTCTTATGCTAGATTCATGAATGCACTTTACAATTTGCTTGACGGTTCTTCTGACAATACAAAATTTGAGGATGATTGTCGAGCCATCATTGGGACACAATCATATGTTCTATTCACATTAGACAAGCTGATCTACAAGCTTGTTAAACAGCTCCAAACAGTCGCCAGTGATGAGATGGACAATAAACTTGTCCAACTTTATGCATTTGAAAAATCAAGAAAGCCAGGAAGATTTGTAGATGTGGTTTATCACGAAAATGCTCGTGTTCTTCTTCATGATGAGAACATTTATCGCATTGAATGTTCATCCTTACCAACCCGGGTGTCTATTCAGCTTATGGATTTTGGGCATGATAAGCCTGAAATGACTGCTGTTTCCATGGACCCTAATTTTTCCGCTTATCTGCACAATGAATTCCTCTCAGTTCTTCCTGACAAAAAAGAGAAGTCTGGGATCTTCTTGAAGAGGAACAAATGTGCGTATGGTAGTAGTGATGAATTGTCTGCTATCTGTGAGGCCATGGAAGGACTTAAAGTCACCAATGGTTTGGAGTGTAAGATAGCTTGCCATTCATCGAAGGTCTCATACGTTTTAGATACAGAAGACTTCCTGTTTCGGACAAAAAGGAAAAGGAAAACTTTGCATCGGGACAGTTCATGCCAAAAGCTGGCCAGGTCTTCCAATGGTTCGAGTAGAGTAGAGCGGTTTCACCGGTTGCTTTCTGGCTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000118 GO:0000122 GO:0000785 GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006476 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016575 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0033993 GO:0035601 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0097305 GO:0098732 GO:1901564 GO:1901700 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04139 ko04919 ko05016 ko05202 map04139 map04919 map05016 map05202

Pfam Domains

Protein Families

PAH Sin3_corepress Sin3a_C

Protein Analysis

1447

Amino Acids

163.97

Weight (kDa)

5.35

Isoelectric Point (pI)

45.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002013)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24190 AT1G24190 AT1G24190 AT1G70060 AT1G70060
fragaria_vesca	FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300
malus_domestica	MD13G1084700.v1.1 MD16G1083700.v1.1
prunus_persica	Prupe.1G262300_v2.0.a1 Prupe.1G262300_v2.0.a1 Prupe.1G262300_v2.0.a1 Prupe.1G262300_v2.0.a1
pyrus_communis	pycom13g07320 pycom16g07260
rosa_chinensis	RchiOBHm_Chr4g0444901
rosa_laevigata	RLG00000005790
rosa_multiflora	Rmu_sc0006845.1_g000002 Rmu_sc0013783.1_g000004
rosa_roxburghii	Rroxscaffold_5G00385400
rosa_rugosa	Rorug04G0355800 Rorug04G0355900.1 Rorug04G0356000 Rorug04G0356100
rosa_samantha	Rh4AG417700 Rh4BG429500 Rh4CG444200 Rh4DG425400
rosa_wichuraiana	Rw4G035800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	450
Acc16I	TGCGCA	1 cut(s)	1676
AccB1I	GGYRCC	1 cut(s)	2921
AccB7I	CCANNNNNTGG	4 cut(s)	94, 2342, 3071, 4276
AccBSI	CCGCTC	1 cut(s)	4312
AclI	AACGTT	1 cut(s)	3397
AclWI	GGATC	5 cut(s)	737, 1149, 1413, 2219, 4070
AcoI	YGGCCR	2 cut(s)	1045, 4278
AcuI	CTGAAG	6 cut(s)	570, 954, 1136, 1629, 2400, 3357
AfaI	GTAC	4 cut(s)	479, 1688, 2219, 2422
AfeI	AGCGCT	2 cut(s)	1532, 3181
AflII	CTTAAG	1 cut(s)	2092
AgeI	ACCGGT	1 cut(s)	4320
AhdI	GACNNNNNGTC	1 cut(s)	4142
AjnI	CCWGG	8 cut(s)	513, 961, 1047, 1104, 2452, 2749, 3832, 4280
AjuI	GAANNNNNNNTTGG	2 cut(s)	2325, 2357
AloI	GAACNNNNNNTCC	4 cut(s)	688, 720, 3387, 3419
Alw21I	GWGCWC	2 cut(s)	650, 763
Alw26I	GTCTC	8 cut(s)	1173, 1556, 2430, 2502, 2936, 3125, 3363, 4195
AlwI	GGATC	5 cut(s)	737, 1149, 1413, 2219, 4070
AlwNI	CAGNNNCTG	1 cut(s)	1171
Ama87I	CYCGRG	2 cut(s)	63, 3927
Aor51HI	AGCGCT	2 cut(s)	1532, 3181
AoxI	GGCC	8 cut(s)	47, 222, 1045, 1450, 2357, 2565, 4125, 4278
ApeKI	GCWGC	6 cut(s)	104, 107, 524, 1533, 2174, 2609
AseI	ATTAAT	1 cut(s)	1503
AsiGI	ACCGGT	1 cut(s)	4320
Asp700I	GAANNNNTTC	4 cut(s)	195, 2517, 3399, 3487
AspLEI	GCGC	3 cut(s)	1533, 1677, 3182
AspS9I	GGNCC	7 cut(s)	9, 48, 223, 696, 1925, 2565, 3991
AsuC2I	CCSGG	4 cut(s)	848, 2823, 3928, 3929
AsuNHI	GCTAGC	1 cut(s)	1583
AvaI	CYCGRG	2 cut(s)	63, 3927
AvaII	GGWCC	4 cut(s)	9, 696, 1925, 3991
BalI	TGGCCA	2 cut(s)	1047, 4280
BanI	GGYRCC	1 cut(s)	2921
BanII	GRGCYC	3 cut(s)	650, 763, 3602
BarI	GAAGNNNNNNTAC	4 cut(s)	1287, 1319, 4178, 4210
BauI	CACGAG	3 cut(s)	1395, 3267, 3870
BbsI	GAAGAC	4 cut(s)	24, 942, 4218, 4278
Bbv12I	GWGCWC	2 cut(s)	650, 763
BbvI	GCAGC	6 cut(s)	94, 116, 536, 1520, 2161, 2596
BciT130I	CCWGG	8 cut(s)	515, 963, 1049, 1106, 2454, 2751, 3834, 4282
BciVI	GTATCC	2 cut(s)	1206, 1642
BclI	TGATCA	2 cut(s)	1621, 2050
BcnI	CCSGG	4 cut(s)	848, 2823, 3928, 3929
BcoDI	GTCTC	8 cut(s)	1173, 1556, 2430, 2502, 2936, 3125, 3363, 4195
BfaI	CTAG	5 cut(s)	1473, 1584, 2955, 3468, 3618
BfmI	CTRYAG	1 cut(s)	2673
BfoI	RGCGCY	2 cut(s)	1534, 3183
BfrI	CTTAAG	1 cut(s)	2092
BfuI	GTATCC	2 cut(s)	1206, 1642
BglI	GCCNNNNNGGC	2 cut(s)	79, 2111
BglII	AGATCT	2 cut(s)	1201, 2242
BisI	GCNGC	8 cut(s)	47, 105, 108, 525, 668, 1534, 2175, 2610
BlsI	GCNGC	8 cut(s)	48, 106, 109, 526, 669, 1535, 2176, 2611
Bme18I	GGWCC	4 cut(s)	9, 696, 1925, 3991
BmeRI	GACNNNNNGTC	1 cut(s)	4142
BmeT110I	CYCGRG	2 cut(s)	63, 3927
BmgT120I	GGNCC	7 cut(s)	9, 48, 223, 696, 1925, 2565, 3991
BmiI	GGNNCC	4 cut(s)	1256, 2566, 2923, 3993
BmsI	GCATC	8 cut(s)	121, 289, 967, 2678, 3139, 3145, 3340, 4261
BmtI	GCTAGC	1 cut(s)	1587
BpiI	GAAGAC	4 cut(s)	24, 942, 4218, 4278
BplI	GAGNNNNNCTC	4 cut(s)	1643, 1675, 3449, 3481
BpmI	CTGGAG	2 cut(s)	2712, 3423
Bpu10I	CCTNAGC	1 cut(s)	136
BpuEI	CTTGAG	5 cut(s)	26, 365, 1433, 2346, 2870
BpuMI	CCSGG	4 cut(s)	848, 2823, 3928, 3929
BsaBI	GATNNNNATC	2 cut(s)	1350, 2247
BsaI	GGTCTC	2 cut(s)	2936, 4195
BsaJI	CCNNGG	9 cut(s)	51, 699, 1888, 2749, 2750, 3312, 3927, 3987, 4128
BsaWI	WCCGGW	1 cut(s)	4320
BsaXI	ACNNNNNCTCC	4 cut(s)	781, 811, 3387, 3417
Bse118I	RCCGGY	1 cut(s)	4320
Bse1I	ACTGG	4 cut(s)	1684, 1734, 2413, 3774
Bse3DI	GCAATG	1 cut(s)	636
Bse8I	GATNNNNATC	2 cut(s)	1350, 2247
BseBI	CCWGG	8 cut(s)	515, 963, 1049, 1106, 2454, 2751, 3834, 4282
BseDI	CCNNGG	9 cut(s)	51, 699, 1888, 2749, 2750, 3312, 3927, 3987, 4128
BseJI	GATNNNNATC	2 cut(s)	1350, 2247
BseMI	GCAATG	1 cut(s)	636
BseMII	CTCAG	7 cut(s)	558, 739, 1850, 2947, 3197, 3558, 4044
BseNI	ACTGG	4 cut(s)	1684, 1734, 2413, 3774
BseRI	GAGGAG	4 cut(s)	81, 354, 829, 3026
BseXI	GCAGC	6 cut(s)	94, 116, 536, 1520, 2161, 2596
BsgI	GTGCAG	4 cut(s)	1519, 2388, 2678, 3998
BshFI	GGCC	8 cut(s)	49, 224, 1047, 1452, 2359, 2567, 4127, 4280
BshNI	GGYRCC	1 cut(s)	2921
BshTI	ACCGGT	1 cut(s)	4320
BsiHKAI	GWGCWC	2 cut(s)	650, 763
BsiHKCI	CYCGRG	2 cut(s)	63, 3927
BsiSI	CCGG	4 cut(s)	847, 2822, 3928, 4321
BslFI	GGGAC	3 cut(s)	896, 3715, 4271
BsmAI	GTCTC	8 cut(s)	1173, 1556, 2430, 2502, 2936, 3125, 3363, 4195
BsmBI	CGTCTC	3 cut(s)	1556, 2502, 3363
BsmFI	GGGAC	3 cut(s)	896, 3715, 4271
BsmI	GAATGC	2 cut(s)	2517, 3634
BsnI	GGCC	8 cut(s)	49, 224, 1047, 1452, 2359, 2567, 4127, 4280
Bso31I	GGTCTC	2 cut(s)	2936, 4195
BsoBI	CYCGRG	2 cut(s)	63, 3927
Bsp1286I	GDGCHC	3 cut(s)	650, 763, 3602
Bsp1407I	TGTACA	1 cut(s)	477
Bsp19I	CCATGG	5 cut(s)	51, 699, 1888, 3987, 4128
BspANI	GGCC	8 cut(s)	49, 224, 1047, 1452, 2359, 2567, 4127, 4280
BspCNI	CTCAG	7 cut(s)	557, 738, 1851, 2946, 3196, 3559, 4043
BspHI	TCATGA	5 cut(s)	207, 1269, 3624, 3883, 4337
BspLI	GGNNCC	4 cut(s)	1256, 2566, 2923, 3993
BspOI	GCTAGC	1 cut(s)	1587
BspPI	GGATC	5 cut(s)	737, 1149, 1413, 2219, 4070
BspQI	GCTCTTC	1 cut(s)	3267
BspT107I	GGYRCC	1 cut(s)	2921
BspTI	CTTAAG	1 cut(s)	2092
BspTNI	GGTCTC	2 cut(s)	2936, 4195
BsrBI	CCGCTC	1 cut(s)	4312
BsrDI	GCAATG	1 cut(s)	636
BsrFI	RCCGGY	1 cut(s)	4320
BsrGI	TGTACA	1 cut(s)	477
BsrI	ACTGG	4 cut(s)	1684, 1734, 2413, 3774
BssAI	RCCGGY	1 cut(s)	4320
BssECI	CCNNGG	9 cut(s)	51, 699, 1888, 2749, 2750, 3312, 3927, 3987, 4128
BssSI	CACGAG	3 cut(s)	1395, 3267, 3870
BssT1I	CCWWGG	6 cut(s)	51, 699, 1888, 3312, 3987, 4128
Bst2BI	CACGAG	3 cut(s)	1395, 3267, 3870
Bst2UI	CCWGG	8 cut(s)	515, 963, 1049, 1106, 2454, 2751, 3834, 4282
Bst6I	CTCTTC	4 cut(s)	1968, 2940, 3267, 4067
BstAFI	CTTAAG	1 cut(s)	2092
BstAUI	TGTACA	1 cut(s)	477
BstC8I	GCNNGC	8 cut(s)	1529, 1585, 1602, 2112, 3086, 3582, 4174, 4278
BstDEI	CTNAG	9 cut(s)	136, 544, 725, 1859, 2801, 2933, 3183, 3567, 4030
BstDSI	CCRYGG	5 cut(s)	51, 699, 1888, 3987, 4128
BstEII	GGTNACC	1 cut(s)	1883
BstH2I	RGCGCY	2 cut(s)	1534, 3183
BstHHI	GCGC	3 cut(s)	1533, 1677, 3182
BstMAI	GTCTC	8 cut(s)	1173, 1556, 2430, 2502, 2936, 3125, 3363, 4195
BstNI	CCWGG	8 cut(s)	515, 963, 1049, 1106, 2454, 2751, 3834, 4282
BstNSI	RCATGY	6 cut(s)	680, 895, 1236, 1675, 3107, 3434
BstPI	GGTNACC	1 cut(s)	1883
BstSFI	CTRYAG	1 cut(s)	2673
BstV1I	GCAGC	6 cut(s)	94, 116, 536, 1520, 2161, 2596
BstV2I	GAAGAC	4 cut(s)	24, 942, 4218, 4278
BstX2I	RGATCY	4 cut(s)	1154, 1201, 2242, 4062
BstXI	CCANNNNNNTGG	1 cut(s)	4156
BstYI	RGATCY	4 cut(s)	1154, 1201, 2242, 4062
BsuI	GTATCC	2 cut(s)	1206, 1642
BsuRI	GGCC	8 cut(s)	49, 224, 1047, 1452, 2359, 2567, 4127, 4280
BtgI	CCRYGG	5 cut(s)	51, 699, 1888, 3987, 4128
BtgZI	GCGATG	2 cut(s)	450, 990
BtsI	GCAGTG	1 cut(s)	237
BtsIMutI	CAGTG	7 cut(s)	237, 733, 1320, 2137, 2439, 2832, 3781
Cac8I	GCNNGC	8 cut(s)	1529, 1585, 1602, 2112, 3086, 3582, 4174, 4278
CaiI	CAGNNNCTG	1 cut(s)	1171
CciI	TCATGA	5 cut(s)	207, 1269, 3624, 3883, 4337
CfoI	GCGC	3 cut(s)	1533, 1677, 3182
Cfr10I	RCCGGY	1 cut(s)	4320
Cfr13I	GGNCC	7 cut(s)	9, 48, 223, 696, 1925, 2565, 3991
Cfr9I	CCCGGG	1 cut(s)	3927
CseI	GACGC	1 cut(s)	1416
Csp6I	GTAC	4 cut(s)	478, 1687, 2218, 2421
CspAI	ACCGGT	1 cut(s)	4320
CspCI	CAANNNNNGTGG	2 cut(s)	1958, 1993
CviQI	GTAC	4 cut(s)	478, 1687, 2218, 2421
DdeI	CTNAG	9 cut(s)	136, 544, 725, 1859, 2801, 2933, 3183, 3567, 4030
DraI	TTTAAA	2 cut(s)	274, 1666
DriI	GACNNNNNGTC	1 cut(s)	4142
EaeI	YGGCCR	2 cut(s)	1045, 4278
Eam1104I	CTCTTC	4 cut(s)	1968, 2940, 3267, 4067
Eam1105I	GACNNNNNGTC	1 cut(s)	4142
EarI	CTCTTC	4 cut(s)	1968, 2940, 3267, 4067
EciI	GGCGGA	2 cut(s)	114, 2129
Ecl136II	GAGCTC	2 cut(s)	648, 761
Eco130I	CCWWGG	6 cut(s)	51, 699, 1888, 3312, 3987, 4128
Eco24I	GRGCYC	3 cut(s)	650, 763, 3602
Eco31I	GGTCTC	2 cut(s)	2936, 4195
Eco32I	GATATC	1 cut(s)	2939
Eco47I	GGWCC	4 cut(s)	9, 696, 1925, 3991
Eco47III	AGCGCT	2 cut(s)	1532, 3181
Eco53kI	GAGCTC	2 cut(s)	648, 761
Eco57I	CTGAAG	6 cut(s)	570, 954, 1136, 1629, 2400, 3357
Eco88I	CYCGRG	2 cut(s)	63, 3927
Eco91I	GGTNACC	1 cut(s)	1883
EcoICRI	GAGCTC	2 cut(s)	648, 761
EcoO65I	GGTNACC	1 cut(s)	1883
EcoRI	GAATTC	2 cut(s)	2476, 4022
EcoRII	CCWGG	8 cut(s)	513, 961, 1047, 1104, 2452, 2749, 3832, 4280
EcoRV	GATATC	1 cut(s)	2939
EcoT14I	CCWWGG	6 cut(s)	51, 699, 1888, 3312, 3987, 4128
EcoT22I	ATGCAT	3 cut(s)	678, 2671, 3814
EcoT38I	GRGCYC	3 cut(s)	650, 763, 3602
ErhI	CCWWGG	6 cut(s)	51, 699, 1888, 3312, 3987, 4128
Esp3I	CGTCTC	3 cut(s)	1556, 2502, 3363
FalI	AAGNNNNNCTT	4 cut(s)	183, 215, 4231, 4263
FaqI	GGGAC	3 cut(s)	896, 3715, 4271
FauI	CCCGC	3 cut(s)	235, 2425, 3573
FauNDI	CATATG	1 cut(s)	3712
FbaI	TGATCA	2 cut(s)	1621, 2050
Fnu4HI	GCNGC	8 cut(s)	47, 105, 108, 525, 668, 1534, 2175, 2610
FriOI	GRGCYC	3 cut(s)	650, 763, 3602
Fsp4HI	GCNGC	8 cut(s)	47, 105, 108, 525, 668, 1534, 2175, 2610
FspBI	CTAG	5 cut(s)	1473, 1584, 2955, 3468, 3618
FspI	TGCGCA	1 cut(s)	1676
GlaI	GCGC	3 cut(s)	1532, 1676, 3181
GluI	GCNGC	8 cut(s)	47, 105, 108, 525, 668, 1534, 2175, 2610
GsuI	CTGGAG	2 cut(s)	2712, 3423
HaeII	RGCGCY	2 cut(s)	1534, 3183
HaeIII	GGCC	8 cut(s)	49, 224, 1047, 1452, 2359, 2567, 4127, 4280
HapII	CCGG	4 cut(s)	847, 2822, 3928, 4321
HgaI	GACGC	1 cut(s)	1416
HhaI	GCGC	3 cut(s)	1533, 1677, 3182
Hin6I	GCGC	3 cut(s)	1531, 1675, 3180
HinP1I	GCGC	3 cut(s)	1531, 1675, 3180
HincII	GTYRAC	3 cut(s)	682, 733, 2839
HindII	GTYRAC	3 cut(s)	682, 733, 2839
HindIII	AAGCTT	1 cut(s)	3746
HinfI	GANTC	9 cut(s)	1745, 1855, 2876, 2948, 3242, 3464, 3488, 3608, 3621
HpaII	CCGG	4 cut(s)	847, 2822, 3928, 4321
Hpy166II	GTNNAC	8 cut(s)	409, 511, 564, 682, 733, 775, 2839, 3292
Hpy8I	GTNNAC	8 cut(s)	409, 511, 564, 682, 733, 775, 2839, 3292
HpyCH4IV	ACGT	6 cut(s)	21, 841, 2157, 2687, 3397, 4197
HpyF3I	CTNAG	9 cut(s)	136, 544, 725, 1859, 2801, 2933, 3183, 3567, 4030
HpySE526I	ACGT	6 cut(s)	21, 841, 2157, 2687, 3397, 4197
HspAI	GCGC	3 cut(s)	1531, 1675, 3180
Ksp22I	TGATCA	2 cut(s)	1621, 2050
LguI	GCTCTTC	1 cut(s)	3267
LmnI	GCTCC	8 cut(s)	101, 616, 639, 645, 1597, 2758, 2906, 3765
Lsp1109I	GCAGC	6 cut(s)	94, 116, 536, 1520, 2161, 2596
LweI	GCATC	8 cut(s)	121, 289, 967, 2678, 3139, 3145, 3340, 4261
MaeI	CTAG	5 cut(s)	1473, 1584, 2955, 3468, 3618
MaeII	ACGT	6 cut(s)	21, 841, 2157, 2687, 3397, 4197
MaeIII	GTNAC	9 cut(s)	842, 1064, 1083, 1636, 1756, 1883, 2043, 2853, 4144
MbiI	CCGCTC	1 cut(s)	4312
MfeI	CAATTG	2 cut(s)	953, 2294
MflI	RGATCY	4 cut(s)	1154, 1201, 2242, 4062
MhlI	GDGCHC	3 cut(s)	650, 763, 3602
MlsI	TGGCCA	2 cut(s)	1047, 4280
MluNI	TGGCCA	2 cut(s)	1047, 4280
MlyI	GAGTC	4 cut(s)	1754, 2957, 3251, 3458
MmeI	TCCRAC	3 cut(s)	1426, 2736, 3826
Mox20I	TGGCCA	2 cut(s)	1047, 4280
Mph1103I	ATGCAT	3 cut(s)	678, 2671, 3814
MroXI	GAANNNNTTC	4 cut(s)	195, 2517, 3399, 3487
MscI	TGGCCA	2 cut(s)	1047, 4280
MslI	CAYNNNNRTG	2 cut(s)	963, 3864
Msp20I	TGGCCA	2 cut(s)	1047, 4280
MspA1I	CMGCKG	1 cut(s)	107
MspCI	CTTAAG	1 cut(s)	2092
MspI	CCGG	4 cut(s)	847, 2822, 3928, 4321
MunI	CAATTG	2 cut(s)	953, 2294
Mva1269I	GAATGC	2 cut(s)	2517, 3634
MvaI	CCWGG	8 cut(s)	515, 963, 1049, 1106, 2454, 2751, 3834, 4282
NciI	CCSGG	4 cut(s)	848, 2823, 3928, 3929
NcoI	CCATGG	5 cut(s)	51, 699, 1888, 3987, 4128
NdeI	CATATG	1 cut(s)	3712
NheI	GCTAGC	1 cut(s)	1583
NlaIV	GGNNCC	4 cut(s)	1256, 2566, 2923, 3993
NmeAIII	GCCGAG	1 cut(s)	2335
NmuCI	GTSAC	6 cut(s)	842, 1064, 1636, 1883, 2043, 4144
NsbI	TGCGCA	1 cut(s)	1676
NsiI	ATGCAT	3 cut(s)	678, 2671, 3814
NspI	RCATGY	6 cut(s)	680, 895, 1236, 1675, 3107, 3434
PaeR7I	CTCGAG	1 cut(s)	63
PagI	TCATGA	5 cut(s)	207, 1269, 3624, 3883, 4337
PasI	CCCWGGG	1 cut(s)	2750
PciSI	GCTCTTC	1 cut(s)	3267
PcsI	WCGNNNNNNNCGW	1 cut(s)	3274
PctI	GAATGC	2 cut(s)	2517, 3634
PdmI	GAANNNNTTC	4 cut(s)	195, 2517, 3399, 3487
PfeI	GAWTC	5 cut(s)	1855, 2876, 3488, 3608, 3621
PflMI	CCANNNNNTGG	4 cut(s)	94, 2342, 3071, 4276
PinAI	ACCGGT	1 cut(s)	4320
PkrI	GCNGC	8 cut(s)	48, 106, 109, 526, 669, 1535, 2176, 2611
PleI	GAGTC	4 cut(s)	1753, 2956, 3250, 3458
PpsI	GAGTC	4 cut(s)	1753, 2956, 3250, 3458
PshBI	ATTAAT	1 cut(s)	1503
PsiI	TTATAA	1 cut(s)	450
Psp124BI	GAGCTC	2 cut(s)	650, 763
Psp1406I	AACGTT	1 cut(s)	3397
Psp6I	CCWGG	8 cut(s)	513, 961, 1047, 1104, 2452, 2749, 3832, 4280
PspEI	GGTNACC	1 cut(s)	1883
PspGI	CCWGG	8 cut(s)	513, 961, 1047, 1104, 2452, 2749, 3832, 4280
PspN4I	GGNNCC	4 cut(s)	1256, 2566, 2923, 3993
PspPI	GGNCC	7 cut(s)	9, 48, 223, 696, 1925, 2565, 3991
PstNI	CAGNNNCTG	1 cut(s)	1171
PsuI	RGATCY	4 cut(s)	1154, 1201, 2242, 4062
PvuII	CAGCTG	1 cut(s)	107
RsaI	GTAC	4 cut(s)	479, 1688, 2219, 2422
RsaNI	GTAC	4 cut(s)	478, 1687, 2218, 2421
RseI	CAYNNNNRTG	2 cut(s)	963, 3864
SacI	GAGCTC	2 cut(s)	650, 763
SapI	GCTCTTC	1 cut(s)	3267
SatI	GCNGC	8 cut(s)	47, 105, 108, 525, 668, 1534, 2175, 2610
Sau96I	GGNCC	7 cut(s)	9, 48, 223, 696, 1925, 2565, 3991
SchI	GAGTC	4 cut(s)	1754, 2957, 3251, 3458
SduI	GDGCHC	3 cut(s)	650, 763, 3602
SfaNI	GCATC	8 cut(s)	121, 289, 967, 2678, 3139, 3145, 3340, 4261
SfcI	CTRYAG	1 cut(s)	2673
Sfr274I	CTCGAG	1 cut(s)	63
SinI	GGWCC	4 cut(s)	9, 696, 1925, 3991
SlaI	CTCGAG	1 cut(s)	63
SmaI	CCCGGG	1 cut(s)	3929
SmiMI	CAYNNNNRTG	2 cut(s)	963, 3864
SmlI	CTYRAG	7 cut(s)	41, 63, 344, 1412, 2092, 2361, 2849
SmoI	CTYRAG	7 cut(s)	41, 63, 344, 1412, 2092, 2361, 2849
SspI	AATATT	2 cut(s)	294, 2264
SspMI	CTAG	5 cut(s)	1473, 1584, 2955, 3468, 3618
SstI	GAGCTC	2 cut(s)	650, 763
StyI	CCWWGG	6 cut(s)	51, 699, 1888, 3312, 3987, 4128
TaiI	ACGT	6 cut(s)	24, 844, 2160, 2690, 3400, 4200
TaqI	TCGA	7 cut(s)	64, 283, 864, 1408, 3688, 4184, 4298
TatI	WGTACW	1 cut(s)	477
TauI	GCSGC	2 cut(s)	49, 670
TfiI	GAWTC	5 cut(s)	1855, 2876, 3488, 3608, 3621
TscAI	CASTG	7 cut(s)	244, 733, 1320, 2137, 2446, 2839, 3781
TseFI	GTSAC	6 cut(s)	842, 1064, 1636, 1883, 2043, 4144
TseI	GCWGC	6 cut(s)	104, 107, 524, 1533, 2174, 2609
Tsp45I	GTSAC	6 cut(s)	842, 1064, 1636, 1883, 2043, 4144
TspGWI	ACGGA	7 cut(s)	626, 928, 1610, 1624, 1817, 3015, 3387
TspMI	CCCGGG	1 cut(s)	3927
TspRI	CASTG	7 cut(s)	244, 733, 1320, 2137, 2446, 2839, 3781
Van91I	CCANNNNNTGG	4 cut(s)	94, 2342, 3071, 4276
Vha464I	CTTAAG	1 cut(s)	2092
VpaK11BI	GGWCC	4 cut(s)	9, 696, 1925, 3991
VspI	ATTAAT	1 cut(s)	1503
XceI	RCATGY	6 cut(s)	680, 895, 1236, 1675, 3107, 3434
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3781
XhoI	CTCGAG	1 cut(s)	63
XmaI	CCCGGG	1 cut(s)	3927
XmnI	GAANNNNTTC	4 cut(s)	195, 2517, 3399, 3487
XspI	CTAG	5 cut(s)	1473, 1584, 2955, 3468, 3618
Zsp2I	ATGCAT	3 cut(s)	678, 2671, 3814

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.