Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0002013

Physical Location & Seq

Genomic Coordinates Forward (+)

4739416 .. 4745209

Gene Structure 5794 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g07260.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2499 bp

ATGAAGAGGTCCAGGGACGACGTTTTTATGAGCTCGCAACTCAAGCGGCCCGTAGTTTCCGCTCGAGGAGAGCCTTCTGGGCAACCCCAGATGATGGCAGCAGCAGCAGCAGCTTCCCAAAAGTTAACAACAAATGATGCCTTAGCAAAGGAAAACAAGTCCATCCAAGAGGTTTACCAGGAGGTTGCTGCACTTTTCCAAGACCACTCAGATTTGCTTGTGGAGTTTACCCACTTTTTACCTGATACTACAGGAACAGCTTCCATTCATCCACCTCACAGAAACTCAATGCTTCGGGATAGGAGCTCTGCAATGCCTACTATGCGGCAGATGCACGTGGACAAGAAAGAAAGGACCATGGGTTCTTATGCTGACCATGATCTCAGTGTTGACCGTCCTGATCCTGACCATGATAAAGCTCTGATGAAAGCAGACAAAGAGCAAAGGAGGCGTGGCGAGAAGGAGAAGGAGAGGAGAGAAGACAGAGAAAGAAGAGAACGGGATGATAGGGATTTTGACCATGATGGCAGTAGAGACCTCAATATGCAGCGTTTTCCCCACAAACAGAAATCTGCTCGTAGGACTGAAGACACTGAACAATTGCAGCCAGGTATGTACGGCCAGGAGTTTGCTTTCTGCGAGAAGGTGAAGGAGAAGTTACGAAATCCTGAAGATTACCAGGAATTTTTGAAGTGCCTTCATATTTATAGCAAGGAAATTATTACACGCTCTGAATTGCAGTCTTTGGTGGCTGATTTAATTGGAAGATATCCTGAACTTATGGATGGGTTCAATGATTTTTTGGCATGTTGTGAGAAGAAAGATGGGTTCCTTGCTGGTGTGATGAGTAAAAAATCCTTGTGGAATGAAGGACATTTACCCAGATCAGTGAAGGTAGAAGATAGGGATAGGGATAGAGATAGAGATCGTGAAAGGGATGATGGGGTTAAAGATAGAGAGCATGAAACTCGAGAAAGAGATAGACTTGATAAAAATGGTGCCTTTGGAATCAAAGAAGTTGGAGGCCAGAAGAGTTTATATACCAGCAAGGATAAATATTTGGCAAAACCCATTAATGAGCTTGACCTCTCCAATTGTGAGCGCTGCACTCCGAGCTATCGTCTCCTGCCAAAGAATTATCCAATACCTTCTGCTAGCCAAAGAACAGAGCTTGGTTTTGAAGTATTAAATGACCACTGGGTATCCGTTACTTCTGGAAGTGAGGATTACTCTTTTAAACACATGCGCAAAAACCAGTATGAAGAAAGCCTGTTTCGGTGTGAGGATGACAGGTTTGAACTGGATATGTTGTTGGAGTCAGTGAACGTAACAACCAAGCGCGTGGAAGATCTATTAGAAAAGATCAACAACAATACGATTAAGATGGACAGTCCAATTCGTATTGAATCATGTTTAGATCACTTCACAGCTCTGAACCTAAGGTGCATTGAGCGATTATATGGTGACCATGGGCTTGATGTGATGGACGTGTTGAGGAAAAATGCTCCACTAGCTTTGCCTGTCATATTGACCCGTTTGAAGCAAAAGCAAGAAGAGTGGGCAAGGTGTCGTTCGGATTTTAATAAAGTTTGGGCTGATATATATGCCAAGAACTATCACAAGTCACTTGATCATCGTAGCTTCTACTTTAAGCAACAAGACACCAAGAGCTTAAGCACAAAAGCCTTGTTGGCAGAGATTAAAGAGATTAGTGAGAAGAAGCGGAAGGAAGATGATGTTCTTCTTGCTATTGCTGCTGGAAATAGACGACCTATTATTCCGAATTTGGAATTTGAGTACCCTGACCCAGAAATCCATGAAGATCTGTATCAACTCGTCAAATATTCTTGTGGAGAAGTTTGCACAACCGAGCAATTGGATAAAGTTATGAAGATATGGACTACTTTTCTTGAACCAATACTTGGTGTTCCTACGCGGCCTCAAGGTGCAGAGGATACTGAAGATGGTGTGAAAGTAAAAAATCTTGCCGTAAAGAGTGGTTCTGTGAGTCCTGGAGAGAGTGATGGTAGTCCTGATGGTGATGCTACTCTGACGAATTCCAAACAGTTGAATTCATCAAGAAATGGAGATGAAAGCATTCAACCTGAACAATCAAGCTCTTGCAGGACTTGGACAGTAAATGGGGCTAATGGGGTCAAAGAAGAAAGTTGTCTCAACATGGATCATGCTGCACGTGAAGGGGATACATTGTACAATACCTCTCGACAAGGTAAAGTGCAGAGTAATACATCTCCAGCTGAGGAAACGTCTGGAGTTAGCAAACAAGACAATTTCAATGAACGATTAGTGAATTCTAATGTATCACTTGCCACTGCGTTGGAGCAAAGTAATGGAAGAACTAATTTGGAACACTCATCAGGGCATAGTCCTACTCCGTCCGGACCTGGTAATGGCACTGTTGATGTTGGGCTGGAGTTACCTTCATCAGAGAGGGTGGTGATTCTACAAGACCAGGTATTTCCTCAAATGGAGCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000118 GO:0000122 GO:0000785 GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006476 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016575 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0033993 GO:0035601 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0097305 GO:0098732 GO:1901564 GO:1901700 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04139 ko04919 ko05016 ko05202 map04139 map04919 map05016 map05202

Pfam Domains

Protein Families

PAH Sin3_corepress Sin3a_C

Protein Analysis

833

Amino Acids

94.96

Weight (kDa)

5.65

Isoelectric Point (pI)

50.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002013)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24190 AT1G24190 AT1G24190 AT1G70060 AT1G70060
fragaria_vesca	FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300 FvH4_4g35300
malus_domestica	MD13G1084700.v1.1 MD16G1083700.v1.1
prunus_persica	Prupe.1G262300_v2.0.a1 Prupe.1G262300_v2.0.a1 Prupe.1G262300_v2.0.a1 Prupe.1G262300_v2.0.a1
pyrus_communis	pycom13g07320 pycom16g07260
rosa_chinensis	RchiOBHm_Chr4g0444901
rosa_laevigata	RLG00000005790
rosa_multiflora	Rmu_sc0006845.1_g000002 Rmu_sc0013783.1_g000004
rosa_roxburghii	Rroxscaffold_5G00385400
rosa_rugosa	Rorug04G0355800 Rorug04G0355900.1 Rorug04G0356000 Rorug04G0356100
rosa_samantha	Rh4AG417700 Rh4BG429500 Rh4CG444200 Rh4DG425400
rosa_wichuraiana	Rw4G035800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1247
AccB1I	GGYRCC	1 cut(s)	998
AccB7I	CCANNNNNTGG	2 cut(s)	94, 1922
AccBSI	CCGCTC	1 cut(s)	62
AccII	CGCG	2 cut(s)	1341, 1936
AccIII	TCCGGA	1 cut(s)	2399
AciI	CCGC	5 cut(s)	46, 60, 325, 1723, 1936
AclWI	GGATC	2 cut(s)	395, 2190
AcoI	YGGCCR	1 cut(s)	619
AcsI	RAATTY	6 cut(s)	683, 1783, 1790, 2056, 2071, 2311
AcuI	CTGAAG	3 cut(s)	606, 690, 1980
AcvI	CACGTG	2 cut(s)	337, 2195
AfaI	GTAC	3 cut(s)	617, 1799, 2213
AfeI	AGCGCT	1 cut(s)	1103
AfiI	CCNNNNNNNGG	3 cut(s)	94, 1922, 2411
AflII	CTTAAG	1 cut(s)	1672
AflIII	ACRYGT	1 cut(s)	1488
AjiI	CACGTC	1 cut(s)	1489
AjnI	CCWGG	8 cut(s)	11, 177, 607, 621, 678, 2011, 2404, 2472
AjuI	GAANNNNNNNTTGG	2 cut(s)	1905, 1937
AloI	GAACNNNNNNTCC	2 cut(s)	346, 378
Alw21I	GWGCWC	2 cut(s)	35, 308
Alw26I	GTCTC	3 cut(s)	528, 1127, 2177
AlwI	GGATC	2 cut(s)	395, 2190
Ama87I	CYCGRG	2 cut(s)	63, 969
Aor13HI	TCCGGA	1 cut(s)	2399
Aor51HI	AGCGCT	1 cut(s)	1103
AoxI	GGCC	4 cut(s)	47, 619, 1024, 1937
ApoI	RAATTY	6 cut(s)	683, 1783, 1790, 2056, 2071, 2311
AseI	ATTAAT	1 cut(s)	1074
Asp700I	GAANNNNTTC	2 cut(s)	259, 2097
AspLEI	GCGC	3 cut(s)	1104, 1248, 1341
AspS9I	GGNCC	4 cut(s)	9, 48, 354, 2402
AsuHPI	GGTGA	4 cut(s)	658, 1475, 2051, 2470
AsuNHI	GCTAGC	1 cut(s)	1154
AvaI	CYCGRG	2 cut(s)	63, 969
AvaII	GGWCC	3 cut(s)	9, 354, 2402
AxyI	CCTNAGG	1 cut(s)	1439
BanI	GGYRCC	1 cut(s)	998
BanII	GRGCYC	2 cut(s)	35, 308
BarI	GAAGNNNNNNTAC	2 cut(s)	861, 893
BbrPI	CACGTG	2 cut(s)	337, 2195
BbsI	GAAGAC	2 cut(s)	486, 594
Bbv12I	GWGCWC	2 cut(s)	35, 308
BbvCI	CCTCAGC	1 cut(s)	2259
BceAI	ACGGC	2 cut(s)	634, 1973
BcgI	CGANNNNNNTGC	2 cut(s)	950, 984
BciT130I	CCWGG	8 cut(s)	13, 179, 609, 623, 680, 2013, 2406, 2474
BciVI	GTATCC	3 cut(s)	1213, 1948, 2197
BclI	TGATCA	1 cut(s)	1630
BcoDI	GTCTC	3 cut(s)	528, 1127, 2177
BfaI	CTAG	2 cut(s)	1155, 1511
BfmI	CTRYAG	1 cut(s)	249
BfoI	RGCGCY	1 cut(s)	1105
BfrI	CTTAAG	1 cut(s)	1672
BfuI	GTATCC	3 cut(s)	1213, 1948, 2197
BglI	GCCNNNNNGGC	2 cut(s)	79, 1691
BglII	AGATCT	2 cut(s)	1348, 1822
Bme1390I	CCNGG	8 cut(s)	13, 179, 609, 623, 680, 2013, 2406, 2474
Bme18I	GGWCC	3 cut(s)	9, 354, 2402
BmeT110I	CYCGRG	2 cut(s)	63, 969
BmgBI	CACGTC	1 cut(s)	1489
BmgT120I	GGNCC	4 cut(s)	9, 48, 354, 2402
BmiI	GGNNCC	2 cut(s)	830, 1000
BmrFI	CCNGG	8 cut(s)	13, 179, 609, 623, 680, 2013, 2406, 2474
BmrI	ACTGGG	1 cut(s)	1207
BmsI	GCATC	3 cut(s)	127, 321, 2032
BmtI	GCTAGC	1 cut(s)	1158
BmuI	ACTGGG	1 cut(s)	1207
BpiI	GAAGAC	2 cut(s)	486, 594
BplI	GAGNNNNNCTC	2 cut(s)	1214, 1246
BpmI	CTGGAG	4 cut(s)	2034, 2238, 2292, 2453
Bpu10I	CCTNAGC	2 cut(s)	142, 2259
BpuEI	CTTGAG	2 cut(s)	26, 1926
BsaAI	YACGTR	2 cut(s)	337, 2195
BsaBI	GATNNNNATC	2 cut(s)	924, 1827
BsaI	GGTCTC	1 cut(s)	528
BsaJI	CCNNGG	3 cut(s)	12, 357, 1468
BsaWI	WCCGGW	1 cut(s)	2399
Bsc4I	CCNNNNNNNGG	3 cut(s)	94, 1922, 2411
Bse1I	ACTGG	3 cut(s)	1202, 1255, 1305
Bse21I	CCTNAGG	1 cut(s)	1439
Bse3DI	GCAATG	1 cut(s)	318
Bse8I	GATNNNNATC	2 cut(s)	924, 1827
BseAI	TCCGGA	1 cut(s)	2399
BseBI	CCWGG	8 cut(s)	13, 179, 609, 623, 680, 2013, 2406, 2474
BseDI	CCNNGG	3 cut(s)	12, 357, 1468
BseGI	GGATG	6 cut(s)	162, 268, 508, 790, 943, 1291
BseJI	GATNNNNATC	2 cut(s)	924, 1827
BseLI	CCNNNNNNNGG	3 cut(s)	94, 1922, 2411
BseMI	GCAATG	1 cut(s)	318
BseMII	CTCAG	3 cut(s)	222, 397, 2250
BseNI	ACTGG	3 cut(s)	1202, 1255, 1305
BseRI	GAGGAG	2 cut(s)	81, 487
BsgI	GTGCAG	5 cut(s)	174, 1090, 1968, 2175, 2258
Bsh1236I	CGCG	2 cut(s)	1341, 1936
BshFI	GGCC	4 cut(s)	49, 621, 1026, 1939
BshNI	GGYRCC	1 cut(s)	998
BsiHKAI	GWGCWC	2 cut(s)	35, 308
BsiHKCI	CYCGRG	2 cut(s)	63, 969
BsiSI	CCGG	1 cut(s)	2400
BslFI	GGGAC	1 cut(s)	29
BslI	CCNNNNNNNGG	3 cut(s)	94, 1922, 2411
BsmAI	GTCTC	3 cut(s)	528, 1127, 2177
BsmBI	CGTCTC	1 cut(s)	1127
BsmFI	GGGAC	1 cut(s)	29
BsmI	GAATGC	1 cut(s)	2097
BsnI	GGCC	4 cut(s)	49, 621, 1026, 1939
Bso31I	GGTCTC	1 cut(s)	528
BsoBI	CYCGRG	2 cut(s)	63, 969
Bsp1286I	GDGCHC	2 cut(s)	35, 308
Bsp13I	TCCGGA	1 cut(s)	2399
Bsp1407I	TGTACA	1 cut(s)	2211
Bsp19I	CCATGG	2 cut(s)	357, 1468
BspACI	CCGC	5 cut(s)	46, 60, 325, 1723, 1936
BspANI	GGCC	4 cut(s)	49, 621, 1026, 1939
BspCNI	CTCAG	3 cut(s)	221, 396, 2251
BspEI	TCCGGA	1 cut(s)	2399
BspFNI	CGCG	2 cut(s)	1341, 1936
BspLI	GGNNCC	2 cut(s)	830, 1000
BspOI	GCTAGC	1 cut(s)	1158
BspPI	GGATC	2 cut(s)	395, 2190
BspT107I	GGYRCC	1 cut(s)	998
BspTI	CTTAAG	1 cut(s)	1672
BspTNI	GGTCTC	1 cut(s)	528
BsrBI	CCGCTC	1 cut(s)	62
BsrDI	GCAATG	1 cut(s)	318
BsrGI	TGTACA	1 cut(s)	2211
BsrI	ACTGG	3 cut(s)	1202, 1255, 1305
BssECI	CCNNGG	3 cut(s)	12, 357, 1468
BssT1I	CCWWGG	2 cut(s)	357, 1468
Bst2UI	CCWGG	8 cut(s)	13, 179, 609, 623, 680, 2013, 2406, 2474
Bst4CI	ACNGT	5 cut(s)	395, 1391, 2067, 2137, 2419
Bst6I	CTCTTC	3 cut(s)	487, 1025, 1548
BstAFI	CTTAAG	1 cut(s)	1672
BstAUI	TGTACA	1 cut(s)	2211
BstBAI	YACGTR	2 cut(s)	337, 2195
BstC8I	GCNNGC	2 cut(s)	35, 1156
BstDEI	CTNAG	5 cut(s)	142, 208, 383, 1439, 2259
BstDSI	CCRYGG	2 cut(s)	357, 1468
BstEII	GGTNACC	1 cut(s)	1463
BstF5I	GGATG	6 cut(s)	162, 268, 508, 790, 943, 1291
BstFNI	CGCG	2 cut(s)	1341, 1936
BstH2I	RGCGCY	1 cut(s)	1105
BstHHI	GCGC	3 cut(s)	1104, 1248, 1341
BstMAI	GTCTC	3 cut(s)	528, 1127, 2177
BstNI	CCWGG	8 cut(s)	13, 179, 609, 623, 680, 2013, 2406, 2474
BstNSI	RCATGY	2 cut(s)	810, 1246
BstPI	GGTNACC	1 cut(s)	1463
BstSCI	CCNGG	8 cut(s)	11, 177, 607, 621, 678, 2011, 2404, 2472
BstSFI	CTRYAG	1 cut(s)	249
BstUI	CGCG	2 cut(s)	1341, 1936
BstV2I	GAAGAC	2 cut(s)	486, 594
BstX2I	RGATCY	2 cut(s)	1348, 1822
BstXI	CCANNNNNNTGG	2 cut(s)	1342, 2338
BstYI	RGATCY	2 cut(s)	1348, 1822
Bsu36I	CCTNAGG	1 cut(s)	1439
BsuI	GTATCC	3 cut(s)	1213, 1948, 2197
BsuRI	GGCC	4 cut(s)	49, 621, 1026, 1939
BtgI	CCRYGG	2 cut(s)	357, 1468
BtrI	CACGTC	1 cut(s)	1489
BtsCI	GGATG	6 cut(s)	162, 268, 508, 790, 943, 1291
BtsI	GCAGTG	1 cut(s)	2331
BtsIMutI	CAGTG	7 cut(s)	391, 591, 894, 1195, 1326, 2331, 2415
Cac8I	GCNNGC	2 cut(s)	35, 1156
CfoI	GCGC	3 cut(s)	1104, 1248, 1341
Cfr13I	GGNCC	4 cut(s)	9, 48, 354, 2402
CsiI	ACCWGGT	2 cut(s)	2404, 2472
Csp6I	GTAC	3 cut(s)	616, 1798, 2212
CspCI	CAANNNNNGTGG	4 cut(s)	1497, 1532, 1538, 1573
CviQI	GTAC	3 cut(s)	616, 1798, 2212
DdeI	CTNAG	5 cut(s)	142, 208, 383, 1439, 2259
DraI	TTTAAA	1 cut(s)	1237
EaeI	YGGCCR	1 cut(s)	619
Eam1104I	CTCTTC	3 cut(s)	487, 1025, 1548
EarI	CTCTTC	3 cut(s)	487, 1025, 1548
Ecl136II	GAGCTC	2 cut(s)	33, 306
Eco130I	CCWWGG	2 cut(s)	357, 1468
Eco24I	GRGCYC	2 cut(s)	35, 308
Eco31I	GGTCTC	1 cut(s)	528
Eco32I	GATATC	1 cut(s)	770
Eco47I	GGWCC	3 cut(s)	9, 354, 2402
Eco47III	AGCGCT	1 cut(s)	1103
Eco53kI	GAGCTC	2 cut(s)	33, 306
Eco57I	CTGAAG	3 cut(s)	606, 690, 1980
Eco72I	CACGTG	2 cut(s)	337, 2195
Eco81I	CCTNAGG	1 cut(s)	1439
Eco88I	CYCGRG	2 cut(s)	63, 969
Eco91I	GGTNACC	1 cut(s)	1463
EcoICRI	GAGCTC	2 cut(s)	33, 306
EcoO65I	GGTNACC	1 cut(s)	1463
EcoRI	GAATTC	3 cut(s)	2056, 2071, 2311
EcoRII	CCWGG	8 cut(s)	11, 177, 607, 621, 678, 2011, 2404, 2472
EcoRV	GATATC	1 cut(s)	770
EcoT14I	CCWWGG	2 cut(s)	357, 1468
EcoT38I	GRGCYC	2 cut(s)	35, 308
ErhI	CCWWGG	2 cut(s)	357, 1468
Esp3I	CGTCTC	1 cut(s)	1127
FaqI	GGGAC	1 cut(s)	29
FbaI	TGATCA	1 cut(s)	1630
FokI	GGATG	6 cut(s)	149, 255, 515, 797, 950, 1298
FriOI	GRGCYC	2 cut(s)	35, 308
FspBI	CTAG	2 cut(s)	1155, 1511
FspI	TGCGCA	1 cut(s)	1247
GlaI	GCGC	3 cut(s)	1103, 1247, 1340
GsuI	CTGGAG	4 cut(s)	2034, 2238, 2292, 2453
HaeII	RGCGCY	1 cut(s)	1105
HaeIII	GGCC	4 cut(s)	49, 621, 1026, 1939
HapII	CCGG	1 cut(s)	2400
HhaI	GCGC	3 cut(s)	1104, 1248, 1341
Hin6I	GCGC	3 cut(s)	1102, 1246, 1339
HinP1I	GCGC	3 cut(s)	1102, 1246, 1339
HincII	GTYRAC	2 cut(s)	126, 391
HindII	GTYRAC	2 cut(s)	126, 391
HinfI	GANTC	5 cut(s)	1008, 1316, 1406, 2008, 2461
HpaI	GTTAAC	1 cut(s)	126
HpaII	CCGG	1 cut(s)	2400
HphI	GGTGA	4 cut(s)	658, 1475, 2051, 2470
Hpy166II	GTNNAC	6 cut(s)	126, 175, 228, 340, 391, 1324
Hpy188I	TCNGA	9 cut(s)	211, 423, 733, 1113, 1434, 1576, 1782, 2052, 2449
Hpy8I	GTNNAC	6 cut(s)	126, 175, 228, 340, 391, 1324
Hpy99I	CGWCG	1 cut(s)	23
HpyCH4III	ACNGT	5 cut(s)	395, 1391, 2067, 2137, 2419
HpyCH4IV	ACGT	6 cut(s)	21, 336, 1326, 1488, 2194, 2267
HpyF3I	CTNAG	5 cut(s)	142, 208, 383, 1439, 2259
HpySE526I	ACGT	6 cut(s)	21, 336, 1326, 1488, 2194, 2267
HspAI	GCGC	3 cut(s)	1102, 1246, 1339
Kpn2I	TCCGGA	1 cut(s)	2399
Ksp22I	TGATCA	1 cut(s)	1630
KspAI	GTTAAC	1 cut(s)	126
LmnI	GCTCC	4 cut(s)	303, 1510, 2341, 2491
LweI	GCATC	3 cut(s)	127, 321, 2032
MabI	ACCWGGT	2 cut(s)	2404, 2472
MaeI	CTAG	2 cut(s)	1155, 1511
MaeII	ACGT	6 cut(s)	21, 336, 1326, 1488, 2194, 2267
MaeIII	GTNAC	6 cut(s)	657, 1207, 1327, 1463, 1623, 2436
MbiI	CCGCTC	1 cut(s)	62
MfeI	CAATTG	3 cut(s)	599, 1093, 1874
MflI	RGATCY	2 cut(s)	1348, 1822
MhlI	GDGCHC	2 cut(s)	35, 308
MlyI	GAGTC	2 cut(s)	1325, 2017
MmeI	TCCRAC	3 cut(s)	1000, 1293, 2319
MroI	TCCGGA	1 cut(s)	2399
MroXI	GAANNNNTTC	2 cut(s)	259, 2097
MspA1I	CMGCKG	1 cut(s)	2258
MspCI	CTTAAG	1 cut(s)	1672
MspI	CCGG	1 cut(s)	2400
MspR9I	CCNGG	8 cut(s)	13, 179, 609, 623, 680, 2013, 2406, 2474
MunI	CAATTG	3 cut(s)	599, 1093, 1874
Mva1269I	GAATGC	1 cut(s)	2097
MvaI	CCWGG	8 cut(s)	13, 179, 609, 623, 680, 2013, 2406, 2474
MvnI	CGCG	2 cut(s)	1341, 1936
NcoI	CCATGG	2 cut(s)	357, 1468
NheI	GCTAGC	1 cut(s)	1154
NlaIV	GGNNCC	2 cut(s)	830, 1000
NmuCI	GTSAC	2 cut(s)	1463, 1623
NsbI	TGCGCA	1 cut(s)	1247
NspI	RCATGY	2 cut(s)	810, 1246
PaeR7I	CTCGAG	2 cut(s)	63, 969
PctI	GAATGC	1 cut(s)	2097
PdmI	GAANNNNTTC	2 cut(s)	259, 2097
PfeI	GAWTC	3 cut(s)	1008, 1406, 2461
PflMI	CCANNNNNTGG	2 cut(s)	94, 1922
PfoI	TCCNGGA	1 cut(s)	2011
PleI	GAGTC	2 cut(s)	1324, 2016
PmaCI	CACGTG	2 cut(s)	337, 2195
PmlI	CACGTG	2 cut(s)	337, 2195
PpsI	GAGTC	2 cut(s)	1324, 2016
Ppu21I	YACGTR	2 cut(s)	337, 2195
PshBI	ATTAAT	1 cut(s)	1074
Psp124BI	GAGCTC	2 cut(s)	35, 308
Psp6I	CCWGG	8 cut(s)	11, 177, 607, 621, 678, 2011, 2404, 2472
PspCI	CACGTG	2 cut(s)	337, 2195
PspEI	GGTNACC	1 cut(s)	1463
PspGI	CCWGG	8 cut(s)	11, 177, 607, 621, 678, 2011, 2404, 2472
PspN4I	GGNNCC	2 cut(s)	830, 1000
PspPI	GGNCC	4 cut(s)	9, 48, 354, 2402
PspXI	VCTCGAGB	1 cut(s)	63
PsuI	RGATCY	2 cut(s)	1348, 1822
PvuII	CAGCTG	1 cut(s)	2258
RsaI	GTAC	3 cut(s)	617, 1799, 2213
RsaNI	GTAC	3 cut(s)	616, 1798, 2212
SacI	GAGCTC	2 cut(s)	35, 308
Sau96I	GGNCC	4 cut(s)	9, 48, 354, 2402
SchI	GAGTC	2 cut(s)	1325, 2017
ScrFI	CCNGG	8 cut(s)	13, 179, 609, 623, 680, 2013, 2406, 2474
SduI	GDGCHC	2 cut(s)	35, 308
SexAI	ACCWGGT	2 cut(s)	2404, 2472
SfaNI	GCATC	3 cut(s)	127, 321, 2032
SfcI	CTRYAG	1 cut(s)	249
Sfr274I	CTCGAG	2 cut(s)	63, 969
SinI	GGWCC	3 cut(s)	9, 354, 2402
SlaI	CTCGAG	2 cut(s)	63, 969
SmlI	CTYRAG	5 cut(s)	41, 63, 969, 1672, 1941
SmoI	CTYRAG	5 cut(s)	41, 63, 969, 1672, 1941
SsiI	CCGC	5 cut(s)	46, 60, 325, 1723, 1936
SspI	AATATT	2 cut(s)	1058, 1844
SspMI	CTAG	2 cut(s)	1155, 1511
SstI	GAGCTC	2 cut(s)	35, 308
StyD4I	CCNGG	8 cut(s)	11, 177, 607, 621, 678, 2011, 2404, 2472
StyI	CCWWGG	2 cut(s)	357, 1468
TaaI	ACNGT	5 cut(s)	395, 1391, 2067, 2137, 2419
TaiI	ACGT	6 cut(s)	24, 339, 1329, 1491, 2197, 2270
TaqI	TCGA	3 cut(s)	64, 970, 2224
TatI	WGTACW	1 cut(s)	2211
TauI	GCSGC	3 cut(s)	49, 328, 1939
TfiI	GAWTC	3 cut(s)	1008, 1406, 2461
TscAI	CASTG	7 cut(s)	391, 598, 894, 1202, 1326, 2338, 2422
TseFI	GTSAC	2 cut(s)	1463, 1623
Tsp45I	GTSAC	2 cut(s)	1463, 1623
TspGWI	ACGGA	2 cut(s)	1195, 2385
TspRI	CASTG	7 cut(s)	391, 598, 894, 1202, 1326, 2338, 2422
Van91I	CCANNNNNTGG	2 cut(s)	94, 1922
Vha464I	CTTAAG	1 cut(s)	1672
VpaK11BI	GGWCC	3 cut(s)	9, 354, 2402
VspI	ATTAAT	1 cut(s)	1074
XapI	RAATTY	6 cut(s)	683, 1783, 1790, 2056, 2071, 2311
XceI	RCATGY	2 cut(s)	810, 1246
XhoI	CTCGAG	2 cut(s)	63, 969
XmnI	GAANNNNTTC	2 cut(s)	259, 2097
XspI	CTAG	2 cut(s)	1155, 1511

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.