AT1G24265

Protein of unknown function (DUF1664)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0004665
Physical Location & Seq
Forward (+)
8600391 .. 8603913
3523 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G24265.3

Sequence Viewer

Length: 1047 bp
ATGGCTCTTCCGCTCGGGAAGCTCACCATCCTCATCGGTGCAGGTCTTATTGGATCAGCATTTTCTAAAGAAGGGGGCTTACCAGATGTCTCCAATTTGGTTTCTGGTGCTTTTAAGATGGTATTCAGGCAACTGAAACAAGACGAACCTAGCAAATCAGCTAGCAAACCCCACGATGATGTACTTGTGGCCCAGGTTAACAGTCTTAGGCATGAGATACAGTTGCTGGGGTCAAACAGACCTATCACCATTGTTTCACCTTCAGGATCAGGTGGTAGAAACTATGGTTTGATCATTATCGTTGGGGTGATAGGCTACGGATATGTGTGGTGGAAGGGCTGGAAACTTCCAGATTTTATGTTTGCAACAAGGCGTAGCTTATCAGATGCATGTAATAATGTTGGCAACCAGATCGATGGTTTTTACTCATCACTCAAGGGTACAAAACGAGAGTTAAGTTCAGAAATTGATATGATGGGTCGTCGTTTGGATGCAAATACAGAAGTAATTCAAGAAACAATACAAGAGGTGGCTAAGCTACAGGATGGTACATCATTTATAAAGGATGACGTTAAGGCTGTTTTCGATGCTTTTGAAAATCTGGCAAGCAAAGTGTGTCGTATAGAGGGAAATCAGGATATCACACTTAGAGGAGTTGGGGCTCTGCATGCTCAGTGTCAGGAGAACCAAAGAATTCAAGAGTCCAATAAGGCTTTGCCATCAACTTCATCACTGCCAGCCCTTGAGGCAGCTCCTATGGCACCCTCTTCAAAGACTCTGTCTTTACCTCCTGCTTCTCCCGATGAATCCCAGTCCCCGTCAACCCCTAATGTAGCTCAAAAGTCACGGGGCCTACTTCAGCACACTCAATCTATGTCTGGTTTGAAGGACATAAATGAAAGCTCTAGTAGCCACAACACGTCTTCAAATGGAATATATTTTGGGGGAAACGGTGCATCAGGATCGAGTTCGGGCGTGCTTGGTAGGTTCTCAATAGCAAGAATAATGAGGACTCGTACTGTGGTCAACACAGTGTCTACTAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1664

Protein Analysis

348

Amino Acids

37.19

Weight (kDa)

8.9

Isoelectric Point (pI)

47.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1664 PF07889 127 - 247 1.9e-44 Protein of unknown function (DUF1664)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 560
Acc36I ACCTGC 1 cut(s) 32
AccB1I GGYRCC 1 cut(s) 760
AccBSI CCGCTC 1 cut(s) 13
AccI GTMKAC 1 cut(s) 1037
AciI CCGC 1 cut(s) 11
AclWI GGATC 3 cut(s) 61, 274, 970
AcsI RAATTY 1 cut(s) 693
AcuI CTGAAG 2 cut(s) 246, 842
AfaI GTAC 4 cut(s) 183, 442, 550, 1018
AflIII ACRYGT 1 cut(s) 918
AgsI TTSAA 6 cut(s) 512, 596, 698, 771, 886, 927
AjiI CACGTC 1 cut(s) 921
AjnI CCWGG 1 cut(s) 192
AluBI AGCT 7 cut(s) 22, 161, 378, 538, 752, 836, 903
AluI AGCT 7 cut(s) 22, 161, 378, 538, 752, 836, 903
Alw26I GTCTC 1 cut(s) 94
AlwI GGATC 3 cut(s) 61, 274, 970
AlwNI CAGNNNCTG 1 cut(s) 226
Ama87I CYCGRG 1 cut(s) 14
AoxI GGCC 2 cut(s) 189, 850
ApeKI GCWGC 1 cut(s) 749
ApoI RAATTY 1 cut(s) 693
ArsI GACNNNNNNTTYG 2 cut(s) 764, 796
Asp700I GAANNNNTTC 1 cut(s) 507
AspS9I GGNCC 2 cut(s) 190, 850
AsuHPI GGTGA 4 cut(s) 16, 238, 249, 319
AsuNHI GCTAGC 1 cut(s) 161
AvaI CYCGRG 1 cut(s) 14
BanI GGYRCC 1 cut(s) 760
BanII GRGCYC 1 cut(s) 664
BarI GAAGNNNNNNTAC 2 cut(s) 63, 95
BbsI GAAGAC 1 cut(s) 915
BbvI GCAGC 1 cut(s) 761
BccI CCATC 6 cut(s) 35, 112, 410, 469, 539, 727
BcgI CGANNNNNNTGC 4 cut(s) 394, 428, 945, 979
BciT130I CCWGG 1 cut(s) 194
BclI TGATCA 1 cut(s) 291
BcoDI GTCTC 1 cut(s) 94
BfaI CTAG 3 cut(s) 150, 162, 906
BfmI CTRYAG 1 cut(s) 539
BfuAI ACCTGC 1 cut(s) 32
BglI GCCNNNNNGGC 1 cut(s) 746
BisI GCNGC 1 cut(s) 750
BlpI GCTNAGC 1 cut(s) 534
BlsI GCNGC 1 cut(s) 751
Bme1390I CCNGG 1 cut(s) 194
BmeT110I CYCGRG 1 cut(s) 14
BmgBI CACGTC 1 cut(s) 921
BmgT120I GGNCC 2 cut(s) 190, 850
BmiI GGNNCC 2 cut(s) 762, 851
BmrFI CCNGG 1 cut(s) 194
BmrI ACTGGG 1 cut(s) 805
BmsI GCATC 4 cut(s) 376, 481, 577, 965
BmtI GCTAGC 1 cut(s) 165
BmuI ACTGGG 1 cut(s) 805
BpiI GAAGAC 1 cut(s) 915
Bpu1102I GCTNAGC 1 cut(s) 534
BpuEI CTTGAG 2 cut(s) 419, 764
Bsa29I ATCGAT 1 cut(s) 414
BsaBI GATNNNNATC 1 cut(s) 296
BsaJI CCNNGG 1 cut(s) 192
Bse1I ACTGG 1 cut(s) 811
Bse8I GATNNNNATC 1 cut(s) 296
BseBI CCWGG 1 cut(s) 194
BseCI ATCGAT 1 cut(s) 414
BseDI CCNNGG 1 cut(s) 192
BseGI GGATG 4 cut(s) 27, 496, 550, 571
BseJI GATNNNNATC 1 cut(s) 296
BseMII CTCAG 1 cut(s) 686
BseNI ACTGG 1 cut(s) 811
BseRI GAGGAG 1 cut(s) 666
BseXI GCAGC 1 cut(s) 761
BseYI CCCAGC 1 cut(s) 226
BsgI GTGCAG 1 cut(s) 60
BshFI GGCC 2 cut(s) 191, 852
BshNI GGYRCC 1 cut(s) 760
BshVI ATCGAT 1 cut(s) 414
BsiHKCI CYCGRG 1 cut(s) 14
BslFI GGGAC 1 cut(s) 799
BsmAI GTCTC 1 cut(s) 94
BsmFI GGGAC 1 cut(s) 799
BsnI GGCC 2 cut(s) 191, 852
BsoBI CYCGRG 1 cut(s) 14
Bsp1286I GDGCHC 1 cut(s) 664
Bsp143I GATC 5 cut(s) 53, 266, 291, 411, 962
Bsp1720I GCTNAGC 1 cut(s) 534
BspACI CCGC 1 cut(s) 11
BspANI GGCC 2 cut(s) 191, 852
BspCNI CTCAG 1 cut(s) 685
BspDI ATCGAT 1 cut(s) 414
BspLI GGNNCC 2 cut(s) 762, 851
BspMI ACCTGC 1 cut(s) 32
BspOI GCTAGC 1 cut(s) 165
BspPI GGATC 3 cut(s) 61, 274, 970
BspQI GCTCTTC 1 cut(s) 12
BspT107I GGYRCC 1 cut(s) 760
BsrBI CCGCTC 1 cut(s) 13
BsrI ACTGG 1 cut(s) 811
BssECI CCNNGG 1 cut(s) 192
BssMI GATC 5 cut(s) 53, 266, 291, 411, 962
Bst2UI CCWGG 1 cut(s) 194
Bst4CI ACNGT 5 cut(s) 203, 222, 953, 1021, 1033
Bst6I CTCTTC 2 cut(s) 12, 772
BstC8I GCNNGC 5 cut(s) 163, 607, 669, 738, 977
BstDEI CTNAG 4 cut(s) 206, 534, 647, 672
BstF5I GGATG 4 cut(s) 27, 496, 550, 571
BstKTI GATC 5 cut(s) 56, 269, 294, 414, 965
BstMAI GTCTC 1 cut(s) 94
BstMBI GATC 5 cut(s) 53, 266, 291, 411, 962
BstMWI GCNNNNNNNGC 5 cut(s) 19, 668, 746, 758, 909
BstNI CCWGG 1 cut(s) 194
BstNSI RCATGY 2 cut(s) 393, 671
BstSCI CCNGG 1 cut(s) 192
BstSFI CTRYAG 1 cut(s) 539
BstV1I GCAGC 1 cut(s) 761
BstV2I GAAGAC 1 cut(s) 915
BstXI CCANNNNNNTGG 1 cut(s) 416
Bsu15I ATCGAT 1 cut(s) 414
BsuRI GGCC 2 cut(s) 191, 852
BsuTUI ATCGAT 1 cut(s) 414
BtrI CACGTC 1 cut(s) 921
BtsCI GGATG 4 cut(s) 27, 496, 550, 571
BtsI GCAGTG 1 cut(s) 731
BtsIMutI CAGTG 3 cut(s) 680, 731, 1038
BveI ACCTGC 1 cut(s) 32
Cac8I GCNNGC 5 cut(s) 163, 607, 669, 738, 977
CaiI CAGNNNCTG 1 cut(s) 226
Cfr13I GGNCC 2 cut(s) 190, 850
ClaI ATCGAT 1 cut(s) 414
Csp6I GTAC 4 cut(s) 182, 441, 549, 1017
CviAII CATG 3 cut(s) 212, 390, 668
CviQI GTAC 4 cut(s) 182, 441, 549, 1017
DdeI CTNAG 4 cut(s) 206, 534, 647, 672
DpnI GATC 5 cut(s) 55, 268, 293, 413, 964
DpnII GATC 5 cut(s) 53, 266, 291, 411, 962
Eam1104I CTCTTC 2 cut(s) 12, 772
EarI CTCTTC 2 cut(s) 12, 772
Eco24I GRGCYC 1 cut(s) 664
Eco32I GATATC 1 cut(s) 640
Eco57I CTGAAG 2 cut(s) 246, 842
Eco88I CYCGRG 1 cut(s) 14
EcoO109I RGGNCCY 1 cut(s) 850
EcoRI GAATTC 1 cut(s) 693
EcoRII CCWGG 1 cut(s) 192
EcoRV GATATC 1 cut(s) 640
EcoT22I ATGCAT 1 cut(s) 391
EcoT38I GRGCYC 1 cut(s) 664
FaeI CATG 3 cut(s) 215, 393, 671
FaqI GGGAC 1 cut(s) 799
FatI CATG 3 cut(s) 211, 389, 667
FbaI TGATCA 1 cut(s) 291
FblI GTMKAC 1 cut(s) 1037
Fnu4HI GCNGC 1 cut(s) 750
FokI GGATG 4 cut(s) 14, 503, 557, 578
FriOI GRGCYC 1 cut(s) 664
Fsp4HI GCNGC 1 cut(s) 750
FspBI CTAG 3 cut(s) 150, 162, 906
GluI GCNGC 1 cut(s) 750
GsaI CCCAGC 1 cut(s) 230
HaeIII GGCC 2 cut(s) 191, 852
Hin1II CATG 3 cut(s) 215, 393, 671
HincII GTYRAC 3 cut(s) 199, 822, 1027
HindII GTYRAC 3 cut(s) 199, 822, 1027
HinfI GANTC 4 cut(s) 701, 775, 806, 1012
HpaI GTTAAC 1 cut(s) 199
HphI GGTGA 4 cut(s) 16, 238, 249, 319
Hpy166II GTNNAC 4 cut(s) 199, 822, 1027, 1038
Hpy188I TCNGA 2 cut(s) 385, 463
Hpy188III TCNNGA 9 cut(s) 16, 264, 350, 512, 635, 680, 698, 800, 960
Hpy8I GTNNAC 4 cut(s) 199, 822, 1027, 1038
Hpy99I CGWCG 1 cut(s) 486
HpyAV CCTTC 4 cut(s) 65, 270, 328, 880
HpyCH4III ACNGT 5 cut(s) 203, 222, 953, 1021, 1033
HpyCH4IV ACGT 2 cut(s) 570, 920
HpyCH4V TGCA 6 cut(s) 41, 365, 389, 494, 667, 956
HpyF10VI GCNNNNNNNGC 5 cut(s) 19, 668, 746, 758, 909
HpyF3I CTNAG 4 cut(s) 206, 534, 647, 672
HpySE526I ACGT 2 cut(s) 570, 920
Hsp92II CATG 3 cut(s) 215, 393, 671
Ksp22I TGATCA 1 cut(s) 291
KspAI GTTAAC 1 cut(s) 199
Kzo9I GATC 5 cut(s) 53, 266, 291, 411, 962
LguI GCTCTTC 1 cut(s) 12
LmnI GCTCC 1 cut(s) 757
Lsp1109I GCAGC 1 cut(s) 761
LweI GCATC 4 cut(s) 376, 481, 577, 965
MaeI CTAG 3 cut(s) 150, 162, 906
MaeII ACGT 2 cut(s) 570, 920
MaeIII GTNAC 1 cut(s) 843
MalI GATC 5 cut(s) 55, 268, 293, 413, 964
MbiI CCGCTC 1 cut(s) 13
MboI GATC 5 cut(s) 53, 266, 291, 411, 962
MboII GAAGA 2 cut(s) 759, 915
MhlI GDGCHC 1 cut(s) 664
MluCI AATT 4 cut(s) 94, 465, 507, 693
MlyI GAGTC 3 cut(s) 710, 769, 1006
MnlI CCTC 8 cut(s) 41, 520, 619, 644, 739, 775, 798, 1002
Mph1103I ATGCAT 1 cut(s) 391
MroXI GAANNNNTTC 1 cut(s) 507
MseI TTAA 4 cut(s) 114, 198, 455, 573
MslI CAYNNNNRTG 1 cut(s) 177
MspR9I CCNGG 1 cut(s) 194
MvaI CCWGG 1 cut(s) 194
MwoI GCNNNNNNNGC 5 cut(s) 19, 668, 746, 758, 909
NdeII GATC 5 cut(s) 53, 266, 291, 411, 962
NheI GCTAGC 1 cut(s) 161
NlaIII CATG 3 cut(s) 215, 393, 671
NlaIV GGNNCC 2 cut(s) 762, 851
NmuCI GTSAC 1 cut(s) 843
NsiI ATGCAT 1 cut(s) 391
NspI RCATGY 2 cut(s) 393, 671
PaeI GCATGC 1 cut(s) 671
PciSI GCTCTTC 1 cut(s) 12
PdmI GAANNNNTTC 1 cut(s) 507
PfeI GAWTC 1 cut(s) 806
PflFI GACNNNGTC 1 cut(s) 778
PkrI GCNGC 1 cut(s) 751
PleI GAGTC 3 cut(s) 709, 769, 1006
PpsI GAGTC 3 cut(s) 709, 769, 1006
PsiI TTATAA 1 cut(s) 560
Psp6I CCWGG 1 cut(s) 192
PspFI CCCAGC 1 cut(s) 226
PspGI CCWGG 1 cut(s) 192
PspN4I GGNNCC 2 cut(s) 762, 851
PspPI GGNCC 2 cut(s) 190, 850
PstNI CAGNNNCTG 1 cut(s) 226
PsyI GACNNNGTC 1 cut(s) 778
RsaI GTAC 4 cut(s) 183, 442, 550, 1018
RsaNI GTAC 4 cut(s) 182, 441, 549, 1017
RseI CAYNNNNRTG 1 cut(s) 177
SapI GCTCTTC 1 cut(s) 12
SaqAI TTAA 4 cut(s) 114, 198, 455, 573
SatI GCNGC 1 cut(s) 750
Sau3AI GATC 5 cut(s) 53, 266, 291, 411, 962
Sau96I GGNCC 2 cut(s) 190, 850
SchI GAGTC 3 cut(s) 710, 769, 1006
ScrFI CCNGG 1 cut(s) 194
SduI GDGCHC 1 cut(s) 664
SfaNI GCATC 4 cut(s) 376, 481, 577, 965
SfcI CTRYAG 1 cut(s) 539
SmiMI CAYNNNNRTG 1 cut(s) 177
SmlI CTYRAG 2 cut(s) 434, 743
SmoI CTYRAG 2 cut(s) 434, 743
SphI GCATGC 1 cut(s) 671
Sse9I AATT 4 cut(s) 94, 465, 507, 693
SsiI CCGC 1 cut(s) 11
SspMI CTAG 3 cut(s) 150, 162, 906
StyD4I CCNGG 1 cut(s) 192
TaaI ACNGT 5 cut(s) 203, 222, 953, 1021, 1033
TaiI ACGT 2 cut(s) 573, 923
TaqI TCGA 3 cut(s) 414, 585, 965
TasI AATT 4 cut(s) 94, 465, 507, 693
TatI WGTACW 1 cut(s) 181
TfiI GAWTC 1 cut(s) 806
Tru1I TTAA 4 cut(s) 114, 198, 455, 573
Tru9I TTAA 4 cut(s) 114, 198, 455, 573
TscAI CASTG 3 cut(s) 680, 738, 1038
TseFI GTSAC 1 cut(s) 843
TseI GCWGC 1 cut(s) 749
Tsp45I GTSAC 1 cut(s) 843
TspDTI ATGAA 3 cut(s) 717, 819, 912
TspGWI ACGGA 1 cut(s) 333
TspRI CASTG 3 cut(s) 680, 738, 1038
Tth111I GACNNNGTC 1 cut(s) 778
XapI RAATTY 1 cut(s) 693
XceI RCATGY 2 cut(s) 393, 671
XmiI GTMKAC 1 cut(s) 1037
XmnI GAANNNNTTC 1 cut(s) 507
XspI CTAG 3 cut(s) 150, 162, 906
Zsp2I ATGCAT 1 cut(s) 391
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.