AT1G26370

RNA helicase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0002639
Physical Location & Seq
Reverse (-)
9121443 .. 9125578
4136 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G26370.1

Sequence Viewer

Length: 2154 bp
ATGCCATCAATGGCGCAAGGAGAACTCAAGAGCTTTGTACAAAACAGTAGACCGAACCCTAAATCTCCTACTGTTTCTCCCTTCAGCATGAGACAAAAGATAGCAGAACATAGAAGATCTCTTCCTATTGCTTCAGTGGAGAAACGTTTGGTTGAGGAGGTTCAAAAGAATGATATTCTGATTATCGTTGGTGAAACCGGTAGTGGCAAGACTACTCAATTGCCTCAGTTCCTCTACAATGCTGGATTCTGTCGAGAGGGAAAGATGATTGGGATAACACAACCGAGGCGTATTGCTGCTGTGACTGTTGCTAAAAGGGTAGCTGAGGAATGTGAGGTTCAGTTAGGCCAAAAGGTTGGCTATTCCATTAGGTTTGATGATACTACTTCTGGTTCGACAAGGTTGAAATACATGACTGATGGATTATTGCTGAGAGAAGCGCTGTTGGATCCGCATCTTTCTAGATATTCAGTCATTATTGTCGATGAAGCTCATGATAGGAGTGTTCATACTGATGTTCTGCTGGCTTTGCTGAAAAAAATACAGCGTACTCGGTCACAGCCTGTTAGTGAGAAAACTGAGTTTGGTAATGTAGCATCACAAGTACAGACAACAACAAGGGATGCGAATGGTCCTCAGCAGAATGGTGTATTAAAAGGGTATCAAGGCAGAAAGTTATCTCCGTTGAAGCTGATCATTATGTCTGCCAGTTTGGATGCACGAGTTTTCTCTGAGTATTTCGGTGGTGCCAAAGCTGTTCATGTGCAGGGGCGACAATTTCCTGTTGACATTCTTTACACTGTTCATCCTGAATCAGATTATGTAGATGCCACCTTGGTCACCATATTTCAGATTCATTTTGAGGAGAAGCCAGGTGACATACTTGTTTTCCTCACTGGGCAAGATGAAATTGAATCTGTTGAGAGACTTGTCCAAGAAAGACTTCAGAACATACCTGAAGACAAACGAAAGCTACTGCCACTTGCTATCTTTTCTGCTCTTCCATCAGAGCAGCAAATGAAAGTTTTTGCCCCAGCTCCGACTGGTTTTCGTAAGGTTATTTTGGCCACAAATATAGCGGAGACATCGATTACAATTCCTGGAATAAGATATGTTATAGACCCTGGGTTTGTTAAGGCACGAAGCTATGATCCAAGCAAAGGCATGGAGTCACTTGATGTTGTTCCAGCATCGAAAGCACAGACGCTTCAAAGAAGTGGACGTGCAGGACGTGAGGGTCCTGGGAAGTCCTTTCGTCTTTATCCTGAGAGGGAATTTGAAAAGTTGGAAGATTCAACTAAGCCAGAGATCAAGAGATGCAATCTCTCAAATATCATTTTGCAGCTGAAGGCTCTGGGGATTGATGATATAGTTGGATTTGATTTTATAGATAAACCTTCAAGGGGGGCGATTATAAAAGCATTGGCAGAGTTGCATTCGCTTGGTGCCTTGGCAGATGATGGTAAACTAGAGAATCCCGTTGGCTACCAAATGTCACGGCTCCCACTGGAACCTGTATACTCCAAAGCTCTAATTTTGGCCAATCAATTCAACTGTCTAGAAGAAATGCTGATCACTGTTGCCGTGCTCAGTGTGGAGTCCATATTTTATGATCCGCGTGAGAAGAGAGAAGAGGCAAGAACCTCAAAAAACCACTTTGCTAGCGTTGAAGGGGATCACCTAACTTATCTTAGTGTTTATCGGGAGTCAGATGAGTTCTTGGAAAAGAGAAAAGCAGCCGGCAGTGGAAACAATATTGATAAAATTATGAAAAAATGGTGTAAGGAGAACTATGTGAATAGCCGTTCCTTGAAGCATGCTCGTGACATATATAGGCAAATTCGTGAACATGTTGAACAGATAGGCTTTAATGTGTCTTCATGCGGAAATGACATGCTTGCGTTTCGTAGATGTCTTGCTGCATCATTTTTCCTTAAAGCAGCACAGAGACAATTGGACGGTACATACAGGGCTTTGGAAAGTGGTGAGGTTGTCCACATCCACCCAACTTCTGTTTTATTCCGTGCGAAACCAGAATGTGTTATCTTCAACGAGCTCATGCAAACCAGCAAGAAGTACATCAAGAACCTCACAATAATTGATTCCTTATGGTTGTCTGAGTTGGCTCCTCACCATTTCCAAACGGCAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000182 GO:0001817 GO:0001819 GO:0001932 GO:0001934 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003723 GO:0003724 GO:0003725 GO:0003729 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006355 GO:0006356 GO:0006396 GO:0006412 GO:0006413 GO:0006518 GO:0006725 GO:0006807 GO:0008026 GO:0008134 GO:0008150 GO:0008152 GO:0008186 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010562 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019220 GO:0019222 GO:0019538 GO:0023051 GO:0023056 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031334 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032479 GO:0032481 GO:0032991 GO:0033613 GO:0034641 GO:0034645 GO:0042325 GO:0042327 GO:0042623 GO:0043021 GO:0043023 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043254 GO:0043408 GO:0043410 GO:0043484 GO:0043565 GO:0043603 GO:0043604 GO:0044087 GO:0044089 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0044877 GO:0045893 GO:0045935 GO:0045937 GO:0045943 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0051090 GO:0051091 GO:0051092 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051174 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0060255 GO:0061702 GO:0065007 GO:0065009 GO:0070013 GO:0070035 GO:0071704 GO:0072559 GO:0080090 GO:0090304 GO:0097159 GO:0140098 GO:1900225 GO:1900227 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1902531 GO:1902533 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03040 ko03050 ko05169 map03040 map03050 map05169
Pfam Domains
Protein Families
DEAD HA2 Helicase_C OB_NTP_bind

Protein Analysis

717

Amino Acids

80.51

Weight (kDa)

8.79

Isoelectric Point (pI)

42.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Helicase_C PF00271 287 - 413 3.9e-11 Helicase conserved C-terminal domain
HA2_C PF21010 504 - 563 9.5e-13 Helicase associated domain (HA2), ratchet-like
OB_NTP_bind PF07717 636 - 711 7.6e-19 Oligonucleotide/oligosaccharide-binding (OB)-fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1415
AasI GACNNNNNNGTC 1 cut(s) 1236
AccB1I GGYRCC 2 cut(s) 746, 1445
AccI GTMKAC 2 cut(s) 49, 1518
AccII CGCG 1 cut(s) 1618
AciI CCGC 4 cut(s) 452, 1079, 1616, 1884
AclI AACGTT 1 cut(s) 145
AclWI GGATC 5 cut(s) 443, 456, 1145, 1607, 1683
AcoI YGGCCR 2 cut(s) 1065, 1539
AcsI RAATTY 2 cut(s) 1274, 1839
AcuI CTGAAG 5 cut(s) 67, 117, 929, 978, 1367
AfaI GTAC 5 cut(s) 39, 550, 606, 1963, 2078
AfeI AGCGCT 1 cut(s) 441
AfiI CCNNNNNNNGG 2 cut(s) 1160, 1403
AflIII ACRYGT 1 cut(s) 1849
AgeI ACCGGT 1 cut(s) 197
AjiI CACGTC 2 cut(s) 1223, 1232
AjnI CCWGG 4 cut(s) 871, 1099, 1123, 1240
AjuI GAANNNNNNNTTGG 2 cut(s) 927, 959
Alw21I GWGCWC 2 cut(s) 1590, 2058
Alw26I GTCTC 4 cut(s) 85, 919, 1076, 1942
AlwI GGATC 5 cut(s) 443, 456, 1145, 1607, 1683
Aor51HI AGCGCT 1 cut(s) 441
AoxI GGCC 3 cut(s) 346, 1065, 1539
ApeKI GCWGC 6 cut(s) 296, 1012, 1342, 1736, 1919, 1940
ApoI RAATTY 2 cut(s) 1274, 1839
ArsI GACNNNNNNTTYG 2 cut(s) 1112, 1144
AsiGI ACCGGT 1 cut(s) 197
Asp700I GAANNNNTTC 1 cut(s) 942
AspLEI GCGC 2 cut(s) 16, 442
AspS9I GGNCC 2 cut(s) 632, 1238
AsuHPI GGTGA 6 cut(s) 203, 832, 887, 1670, 1997, 2123
AsuNHI GCTAGC 1 cut(s) 1661
AvaII GGWCC 2 cut(s) 632, 1238
BalI TGGCCA 2 cut(s) 1067, 1541
BamHI GGATCC 1 cut(s) 448
BanI GGYRCC 2 cut(s) 746, 1445
BanII GRGCYC 1 cut(s) 2058
BauI CACGAG 2 cut(s) 720, 1821
BbsI GAAGAC 2 cut(s) 966, 1869
Bbv12I GWGCWC 2 cut(s) 1590, 2058
BbvCI CCTCAGC 2 cut(s) 324, 636
BbvI GCAGC 6 cut(s) 283, 1024, 1354, 1748, 1906, 1952
BccI CCATC 4 cut(s) 13, 413, 1012, 1454
BceAI ACGGC 3 cut(s) 1514, 1568, 1788
BciT130I CCWGG 4 cut(s) 873, 1101, 1125, 1242
BclI TGATCA 2 cut(s) 693, 1572
BcoDI GTCTC 4 cut(s) 85, 919, 1076, 1942
BfaI CTAG 4 cut(s) 462, 1469, 1559, 1662
BfoI RGCGCY 1 cut(s) 443
BglII AGATCT 1 cut(s) 116
BisI GCNGC 6 cut(s) 297, 1013, 1343, 1737, 1920, 1941
BlsI GCNGC 6 cut(s) 298, 1014, 1344, 1738, 1921, 1942
Bme1390I CCNGG 4 cut(s) 873, 1101, 1125, 1242
Bme18I GGWCC 2 cut(s) 632, 1238
BmgBI CACGTC 2 cut(s) 1223, 1232
BmgT120I GGNCC 2 cut(s) 632, 1238
BmiI GGNNCC 7 cut(s) 450, 748, 1239, 1447, 1502, 1512, 2127
BmrFI CCNGG 4 cut(s) 873, 1101, 1125, 1242
BmrI ACTGGG 1 cut(s) 906
BmsI GCATC 8 cut(s) 463, 605, 613, 706, 817, 1199, 1307, 1931
BmtI GCTAGC 1 cut(s) 1665
BmuI ACTGGG 1 cut(s) 906
BpiI GAAGAC 2 cut(s) 966, 1869
Bpu10I CCTNAGC 2 cut(s) 324, 636
BpuEI CTTGAG 1 cut(s) 11
Bsa29I ATCGAT 1 cut(s) 1088
BsaBI GATNNNNATC 1 cut(s) 453
BsaJI CCNNGG 6 cut(s) 284, 834, 1123, 1124, 1241, 1449
BsaWI WCCGGW 1 cut(s) 197
BsaXI ACNNNNNCTCC 2 cut(s) 61, 91
Bsc4I CCNNNNNNNGG 2 cut(s) 1160, 1403
Bse118I RCCGGY 2 cut(s) 197, 1739
Bse1I ACTGG 4 cut(s) 708, 901, 1048, 1512
Bse8I GATNNNNATC 1 cut(s) 453
BseBI CCWGG 4 cut(s) 873, 1101, 1125, 1242
BseCI ATCGAT 1 cut(s) 1088
BseDI CCNNGG 6 cut(s) 284, 834, 1123, 1124, 1241, 1449
BseGI GGATG 4 cut(s) 628, 721, 805, 1998
BseJI GATNNNNATC 1 cut(s) 453
BseLI CCNNNNNNNGG 2 cut(s) 1160, 1403
BseMII CTCAG 9 cut(s) 239, 315, 422, 570, 650, 723, 1257, 1603, 2109
BseNI ACTGG 4 cut(s) 708, 901, 1048, 1512
BseRI GAGGAG 3 cut(s) 170, 878, 2118
BseXI GCAGC 6 cut(s) 283, 1024, 1354, 1748, 1906, 1952
BseYI CCCAGC 1 cut(s) 1033
BsgI GTGCAG 2 cut(s) 785, 1245
Bsh1236I CGCG 1 cut(s) 1618
BshFI GGCC 3 cut(s) 348, 1067, 1541
BshNI GGYRCC 2 cut(s) 746, 1445
BshTI ACCGGT 1 cut(s) 197
BshVI ATCGAT 1 cut(s) 1088
BsiHKAI GWGCWC 2 cut(s) 1590, 2058
BsiSI CCGG 2 cut(s) 198, 1740
BslI CCNNNNNNNGG 2 cut(s) 1160, 1403
BsmAI GTCTC 4 cut(s) 85, 919, 1076, 1942
BsmI GAATGC 1 cut(s) 1435
BsnI GGCC 3 cut(s) 348, 1067, 1541
Bsp1286I GDGCHC 2 cut(s) 1590, 2058
Bsp1407I TGTACA 1 cut(s) 37
Bsp143I GATC 8 cut(s) 116, 448, 693, 1150, 1308, 1572, 1612, 1675
BspACI CCGC 4 cut(s) 452, 1079, 1616, 1884
BspANI GGCC 3 cut(s) 348, 1067, 1541
BspCNI CTCAG 9 cut(s) 238, 316, 423, 571, 649, 724, 1258, 1602, 2110
BspDI ATCGAT 1 cut(s) 1088
BspFNI CGCG 1 cut(s) 1618
BspHI TCATGA 1 cut(s) 493
BspLI GGNNCC 7 cut(s) 450, 748, 1239, 1447, 1502, 1512, 2127
BspOI GCTAGC 1 cut(s) 1665
BspPI GGATC 5 cut(s) 443, 456, 1145, 1607, 1683
BspQI GCTCTTC 1 cut(s) 1005
BspT107I GGYRCC 2 cut(s) 746, 1445
BsrFI RCCGGY 2 cut(s) 197, 1739
BsrGI TGTACA 1 cut(s) 37
BsrI ACTGG 4 cut(s) 708, 901, 1048, 1512
BssAI RCCGGY 2 cut(s) 197, 1739
BssECI CCNNGG 6 cut(s) 284, 834, 1123, 1124, 1241, 1449
BssMI GATC 8 cut(s) 116, 448, 693, 1150, 1308, 1572, 1612, 1675
BssNAI GTATAC 1 cut(s) 1519
BssSI CACGAG 2 cut(s) 720, 1821
BssT1I CCWWGG 2 cut(s) 834, 1449
Bst1107I GTATAC 1 cut(s) 1519
Bst2BI CACGAG 2 cut(s) 720, 1821
Bst2UI CCWGG 4 cut(s) 873, 1101, 1125, 1242
Bst4CI ACNGT 7 cut(s) 47, 73, 307, 802, 1556, 1579, 1961
Bst6I CTCTTC 4 cut(s) 126, 1005, 1619, 1626
BstAUI TGTACA 1 cut(s) 37
BstC8I GCNNGC 5 cut(s) 525, 1663, 1741, 1818, 1899
BstEII GGTNACC 1 cut(s) 838
BstF5I GGATG 4 cut(s) 628, 721, 805, 1998
BstFNI CGCG 1 cut(s) 1618
BstH2I RGCGCY 1 cut(s) 443
BstHHI GCGC 2 cut(s) 16, 442
BstKTI GATC 8 cut(s) 119, 451, 696, 1153, 1311, 1575, 1615, 1678
BstMAI GTCTC 4 cut(s) 85, 919, 1076, 1942
BstMBI GATC 8 cut(s) 116, 448, 693, 1150, 1308, 1572, 1612, 1675
BstMWI GCNNNNNNNGC 2 cut(s) 529, 1196
BstNI CCWGG 4 cut(s) 873, 1101, 1125, 1242
BstNSI RCATGY 3 cut(s) 1820, 1853, 1897
BstPI GGTNACC 1 cut(s) 838
BstSCI CCNGG 4 cut(s) 871, 1099, 1123, 1240
BstUI CGCG 1 cut(s) 1618
BstV1I GCAGC 6 cut(s) 283, 1024, 1354, 1748, 1906, 1952
BstV2I GAAGAC 2 cut(s) 966, 1869
BstX2I RGATCY 2 cut(s) 116, 448
BstXI CCANNNNNNTGG 1 cut(s) 356
BstYI RGATCY 2 cut(s) 116, 448
BstZ17I GTATAC 1 cut(s) 1519
Bsu15I ATCGAT 1 cut(s) 1088
BsuRI GGCC 3 cut(s) 348, 1067, 1541
BsuTUI ATCGAT 1 cut(s) 1088
BtrI CACGTC 2 cut(s) 1223, 1232
BtsCI GGATG 4 cut(s) 628, 721, 805, 1998
BtsI GCAGTG 1 cut(s) 1750
BtsIMutI CAGTG 7 cut(s) 141, 798, 894, 1505, 1575, 1597, 1750
Cac8I GCNNGC 5 cut(s) 525, 1663, 1741, 1818, 1899
CciI TCATGA 1 cut(s) 493
CfoI GCGC 2 cut(s) 16, 442
Cfr10I RCCGGY 2 cut(s) 197, 1739
Cfr13I GGNCC 2 cut(s) 632, 1238
ClaI ATCGAT 1 cut(s) 1088
CseI GACGC 1 cut(s) 1213
Csp6I GTAC 5 cut(s) 38, 549, 605, 1962, 2077
CspAI ACCGGT 1 cut(s) 197
CviQI GTAC 5 cut(s) 38, 549, 605, 1962, 2077
DpnI GATC 8 cut(s) 118, 450, 695, 1152, 1310, 1574, 1614, 1677
DpnII GATC 8 cut(s) 116, 448, 693, 1150, 1308, 1572, 1612, 1675
DrdI GACNNNNNNGTC 1 cut(s) 1236
DseDI GACNNNNNNGTC 1 cut(s) 1236
EaeI YGGCCR 2 cut(s) 1065, 1539
Eam1104I CTCTTC 4 cut(s) 126, 1005, 1619, 1626
EarI CTCTTC 4 cut(s) 126, 1005, 1619, 1626
Ecl136II GAGCTC 1 cut(s) 2056
Eco130I CCWWGG 2 cut(s) 834, 1449
Eco24I GRGCYC 1 cut(s) 2058
Eco47I GGWCC 2 cut(s) 632, 1238
Eco47III AGCGCT 1 cut(s) 441
Eco53kI GAGCTC 1 cut(s) 2056
Eco57I CTGAAG 5 cut(s) 67, 117, 929, 978, 1367
Eco91I GGTNACC 1 cut(s) 838
EcoICRI GAGCTC 1 cut(s) 2056
EcoO109I RGGNCCY 1 cut(s) 1238
EcoO65I GGTNACC 1 cut(s) 838
EcoRII CCWGG 4 cut(s) 871, 1099, 1123, 1240
EcoT14I CCWWGG 2 cut(s) 834, 1449
EcoT38I GRGCYC 1 cut(s) 2058
ErhI CCWWGG 2 cut(s) 834, 1449
FalI AAGNNNNNCTT 2 cut(s) 927, 959
FbaI TGATCA 2 cut(s) 693, 1572
FblI GTMKAC 2 cut(s) 49, 1518
Fnu4HI GCNGC 6 cut(s) 297, 1013, 1343, 1737, 1920, 1941
FokI GGATG 4 cut(s) 635, 728, 792, 1985
FriOI GRGCYC 1 cut(s) 2058
Fsp4HI GCNGC 6 cut(s) 297, 1013, 1343, 1737, 1920, 1941
FspBI CTAG 4 cut(s) 462, 1469, 1559, 1662
GlaI GCGC 2 cut(s) 15, 441
GluI GCNGC 6 cut(s) 297, 1013, 1343, 1737, 1920, 1941
GsaI CCCAGC 1 cut(s) 1037
HaeII RGCGCY 1 cut(s) 443
HaeIII GGCC 3 cut(s) 348, 1067, 1541
HapII CCGG 2 cut(s) 198, 1740
HgaI GACGC 1 cut(s) 1213
HhaI GCGC 2 cut(s) 16, 442
Hin6I GCGC 2 cut(s) 14, 440
HinP1I GCGC 2 cut(s) 14, 440
HincII GTYRAC 1 cut(s) 787
HindII GTYRAC 1 cut(s) 787
HpaII CCGG 2 cut(s) 198, 1740
HphI GGTGA 6 cut(s) 203, 832, 887, 1670, 1997, 2123
Hpy166II GTNNAC 7 cut(s) 50, 787, 1220, 1466, 1519, 1847, 1996
Hpy188I TCNGA 9 cut(s) 180, 733, 817, 852, 948, 1009, 1041, 1711, 2119
Hpy8I GTNNAC 7 cut(s) 50, 787, 1220, 1466, 1519, 1847, 1996
HpyAV CCTTC 4 cut(s) 91, 1342, 1407, 1664
HpyCH4III ACNGT 7 cut(s) 47, 73, 307, 802, 1556, 1579, 1961
HpyCH4IV ACGT 3 cut(s) 145, 1222, 1231
HpyCH4V TGCA 8 cut(s) 719, 766, 1226, 1320, 1342, 1435, 1922, 2062
HpyF10VI GCNNNNNNNGC 2 cut(s) 529, 1196
HpySE526I ACGT 3 cut(s) 145, 1222, 1231
HspAI GCGC 2 cut(s) 14, 440
KroI GCCGGC 1 cut(s) 1739
KroNI GCCGGC 1 cut(s) 1741
Ksp22I TGATCA 2 cut(s) 693, 1572
Kzo9I GATC 8 cut(s) 116, 448, 693, 1150, 1308, 1572, 1612, 1675
LguI GCTCTTC 1 cut(s) 1005
LmnI GCTCC 3 cut(s) 1042, 1506, 2131
Lsp1109I GCAGC 6 cut(s) 283, 1024, 1354, 1748, 1906, 1952
LweI GCATC 8 cut(s) 463, 605, 613, 706, 817, 1199, 1307, 1931
MaeI CTAG 4 cut(s) 462, 1469, 1559, 1662
MaeII ACGT 3 cut(s) 145, 1222, 1231
MaeIII GTNAC 7 cut(s) 301, 555, 838, 875, 1170, 1494, 1823
MalI GATC 8 cut(s) 118, 450, 695, 1152, 1310, 1574, 1614, 1677
MboI GATC 8 cut(s) 116, 448, 693, 1150, 1308, 1572, 1612, 1675
MfeI CAATTG 2 cut(s) 218, 1952
MflI RGATCY 2 cut(s) 116, 448
MhlI GDGCHC 2 cut(s) 1590, 2058
MlsI TGGCCA 2 cut(s) 1067, 1541
MluNI TGGCCA 2 cut(s) 1067, 1541
MlyI GAGTC 3 cut(s) 1178, 1607, 1715
MmeI TCCRAC 4 cut(s) 426, 1064, 1266, 1354
Mox20I TGGCCA 2 cut(s) 1067, 1541
MroNI GCCGGC 1 cut(s) 1739
MroXI GAANNNNTTC 1 cut(s) 942
MscI TGGCCA 2 cut(s) 1067, 1541
MseI TTAA 4 cut(s) 653, 1134, 1869, 1935
MslI CAYNNNNRTG 2 cut(s) 513, 1821
Msp20I TGGCCA 2 cut(s) 1067, 1541
MspA1I CMGCKG 1 cut(s) 1345
MspI CCGG 2 cut(s) 198, 1740
MspR9I CCNGG 4 cut(s) 873, 1101, 1125, 1242
MunI CAATTG 2 cut(s) 218, 1952
Mva1269I GAATGC 1 cut(s) 1435
MvaI CCWGG 4 cut(s) 873, 1101, 1125, 1242
MvnI CGCG 1 cut(s) 1618
MwoI GCNNNNNNNGC 2 cut(s) 529, 1196
NaeI GCCGGC 1 cut(s) 1741
NdeII GATC 8 cut(s) 116, 448, 693, 1150, 1308, 1572, 1612, 1675
NgoMIV GCCGGC 1 cut(s) 1739
NheI GCTAGC 1 cut(s) 1661
NlaIV GGNNCC 7 cut(s) 450, 748, 1239, 1447, 1502, 1512, 2127
NmuCI GTSAC 7 cut(s) 301, 555, 838, 875, 1170, 1494, 1823
NspI RCATGY 3 cut(s) 1820, 1853, 1897
PaeI GCATGC 1 cut(s) 1820
PagI TCATGA 1 cut(s) 493
PasI CCCWGGG 1 cut(s) 1124
PciI ACATGT 1 cut(s) 1849
PciSI GCTCTTC 1 cut(s) 1005
PcsI WCGNNNNNNNCGW 1 cut(s) 1228
PctI GAATGC 1 cut(s) 1435
PdiI GCCGGC 1 cut(s) 1741
PdmI GAANNNNTTC 1 cut(s) 942
PfeI GAWTC 7 cut(s) 246, 812, 853, 914, 1292, 1474, 2102
PfoI TCCNGGA 1 cut(s) 1099
PinAI ACCGGT 1 cut(s) 197
PkrI GCNGC 6 cut(s) 298, 1014, 1344, 1738, 1921, 1942
PleI GAGTC 3 cut(s) 1177, 1606, 1714
PpsI GAGTC 3 cut(s) 1177, 1606, 1714
PpuMI RGGWCCY 1 cut(s) 1238
PscI ACATGT 1 cut(s) 1849
PsiI TTATAA 1 cut(s) 1415
Psp124BI GAGCTC 1 cut(s) 2058
Psp1406I AACGTT 1 cut(s) 145
Psp5II RGGWCCY 1 cut(s) 1238
Psp6I CCWGG 4 cut(s) 871, 1099, 1123, 1240
PspEI GGTNACC 1 cut(s) 838
PspFI CCCAGC 1 cut(s) 1033
PspGI CCWGG 4 cut(s) 871, 1099, 1123, 1240
PspN4I GGNNCC 7 cut(s) 450, 748, 1239, 1447, 1502, 1512, 2127
PspPI GGNCC 2 cut(s) 632, 1238
PspPPI RGGWCCY 1 cut(s) 1238
PsuI RGATCY 2 cut(s) 116, 448
PvuII CAGCTG 1 cut(s) 1345
RsaI GTAC 5 cut(s) 39, 550, 606, 1963, 2078
RsaNI GTAC 5 cut(s) 38, 549, 605, 1962, 2077
RseI CAYNNNNRTG 2 cut(s) 513, 1821
SacI GAGCTC 1 cut(s) 2058
SapI GCTCTTC 1 cut(s) 1005
SaqAI TTAA 4 cut(s) 653, 1134, 1869, 1935
SatI GCNGC 6 cut(s) 297, 1013, 1343, 1737, 1920, 1941
Sau3AI GATC 8 cut(s) 116, 448, 693, 1150, 1308, 1572, 1612, 1675
Sau96I GGNCC 2 cut(s) 632, 1238
SchI GAGTC 3 cut(s) 1178, 1607, 1715
ScrFI CCNGG 4 cut(s) 873, 1101, 1125, 1242
SduI GDGCHC 2 cut(s) 1590, 2058
SfaNI GCATC 8 cut(s) 463, 605, 613, 706, 817, 1199, 1307, 1931
SinI GGWCC 2 cut(s) 632, 1238
SmiMI CAYNNNNRTG 2 cut(s) 513, 1821
SmlI CTYRAG 1 cut(s) 26
SmoI CTYRAG 1 cut(s) 26
SphI GCATGC 1 cut(s) 1820
SsiI CCGC 4 cut(s) 452, 1079, 1616, 1884
SspI AATATT 1 cut(s) 1756
SspMI CTAG 4 cut(s) 462, 1469, 1559, 1662
SstI GAGCTC 1 cut(s) 2058
StyD4I CCNGG 4 cut(s) 871, 1099, 1123, 1240
StyI CCWWGG 2 cut(s) 834, 1449
TaaI ACNGT 7 cut(s) 47, 73, 307, 802, 1556, 1579, 1961
TaiI ACGT 3 cut(s) 148, 1225, 1234
TaqI TCGA 5 cut(s) 253, 395, 483, 1088, 1193
TaqII GACCGA 2 cut(s) 67, 543
TatI WGTACW 3 cut(s) 37, 604, 2076
TfiI GAWTC 7 cut(s) 246, 812, 853, 914, 1292, 1474, 2102
Tru1I TTAA 4 cut(s) 653, 1134, 1869, 1935
Tru9I TTAA 4 cut(s) 653, 1134, 1869, 1935
TscAI CASTG 7 cut(s) 141, 805, 901, 1512, 1582, 1597, 1750
TseFI GTSAC 7 cut(s) 301, 555, 838, 875, 1170, 1494, 1823
TseI GCWGC 6 cut(s) 296, 1012, 1342, 1736, 1919, 1940
Tsp45I GTSAC 7 cut(s) 301, 555, 838, 875, 1170, 1494, 1823
TspDTI ATGAA 9 cut(s) 497, 501, 749, 794, 845, 921, 1034, 1784, 1869
TspGWI ACGGA 2 cut(s) 672, 2012
TspRI CASTG 7 cut(s) 141, 805, 901, 1512, 1582, 1597, 1750
VpaK11BI GGWCC 2 cut(s) 632, 1238
XapI RAATTY 2 cut(s) 1274, 1839
XbaI TCTAGA 2 cut(s) 461, 1558
XceI RCATGY 3 cut(s) 1820, 1853, 1897
XmiI GTMKAC 2 cut(s) 49, 1518
XmnI GAANNNNTTC 1 cut(s) 942
XspI CTAG 4 cut(s) 462, 1469, 1559, 1662
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.