ATP-dependent RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G26370 |
| fragaria_vesca | FvH4_4g29860 FvH4_4g29860 FvH4_4g29860 FvH4_4g29860 FvH4_4g29860 FvH4_4g29860 |
| malus_domestica | MD16G1060000.v1.1 |
| prunus_persica | Prupe.1G288500_v2.0.a1 Prupe.1G288500_v2.0.a1 Prupe.1G288500_v2.0.a1 Prupe.1G288500_v2.0.a1 Prupe.1G288500_v2.0.a1 Prupe.1G288500_v2.0.a1 Prupe.1G288500_v2.0.a1 Prupe.1G288500_v2.0.a1 Prupe.1G288500_v2.0.a1 Prupe.1G288500_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0438111 RchiOBHm_Chr6g0281861 |
| rosa_laevigata | RLG00000001450 RLG00000006387 RLG00000012924 |
| rosa_multiflora | Rmu_sc0001992.1_g000015 Rmu_sc0004728.1_g000005 Rmu_sc0039364.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00379250 |
| rosa_rugosa | Rorug04G0307200 Rorug04G0307200 Rorug06G0144200 |
| rosa_samantha | Rh4AG358600 Rh4CG383600 Rh4DG364400 Rh6AG257300 Rh6BG260300 Rh6CG259400 Rh6DG251600 |
| rosa_wichuraiana | Rw0G006310 Rw0G016250 Rw6G022280 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 776 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 359 |
| AatII | GACGTC | 1 cut(s) | 452 |
| AccII | CGCG | 1 cut(s) | 676 |
| AciI | CCGC | 3 cut(s) | 29, 180, 1475 |
| AclWI | GGATC | 2 cut(s) | 32, 830 |
| AcsI | RAATTY | 3 cut(s) | 635, 1123, 1197 |
| AcuI | CTGAAG | 1 cut(s) | 744 |
| AcyI | GRCGYC | 1 cut(s) | 449 |
| AfaI | GTAC | 1 cut(s) | 132 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 408, 524 |
| AflII | CTTAAG | 1 cut(s) | 707 |
| AgsI | TTSAA | 7 cut(s) | 158, 163, 885, 908, 1022, 1343, 1445 |
| AjnI | CCWGG | 5 cut(s) | 333, 406, 463, 593, 918 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1110, 1142 |
| AluBI | AGCT | 9 cut(s) | 62, 80, 186, 230, 347, 389, 890, 1211, 1405 |
| AluI | AGCT | 9 cut(s) | 62, 80, 186, 230, 347, 389, 890, 1211, 1405 |
| Alw21I | GWGCWC | 1 cut(s) | 1180 |
| Alw26I | GTCTC | 3 cut(s) | 241, 440, 615 |
| AlwI | GGATC | 2 cut(s) | 32, 830 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 152 |
| ApeKI | GCWGC | 2 cut(s) | 857, 1500 |
| ApoI | RAATTY | 3 cut(s) | 635, 1123, 1197 |
| AseI | ATTAAT | 2 cut(s) | 167, 1053 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 603 |
| AsuHPI | GGTGA | 3 cut(s) | 323, 362, 1274 |
| AsuII | TTCGAA | 1 cut(s) | 557 |
| AxyI | CCTNAGG | 2 cut(s) | 20, 1169 |
| BauI | CACGAG | 1 cut(s) | 1179 |
| BbsI | GAAGAC | 1 cut(s) | 355 |
| Bbv12I | GWGCWC | 1 cut(s) | 1180 |
| BbvI | GCAGC | 2 cut(s) | 844, 1512 |
| BccI | CCATC | 6 cut(s) | 2, 49, 298, 840, 1220, 1294 |
| BciT130I | CCWGG | 5 cut(s) | 335, 408, 465, 595, 920 |
| BclI | TGATCA | 1 cut(s) | 1072 |
| BcoDI | GTCTC | 3 cut(s) | 241, 440, 615 |
| BfaI | CTAG | 3 cut(s) | 51, 803, 1377 |
| BfrI | CTTAAG | 1 cut(s) | 707 |
| BisI | GCNGC | 2 cut(s) | 858, 1501 |
| BlsI | GCNGC | 2 cut(s) | 859, 1502 |
| Bme1390I | CCNGG | 5 cut(s) | 335, 408, 465, 595, 920 |
| BmiI | GGNNCC | 2 cut(s) | 534, 1112 |
| BmrFI | CCNGG | 5 cut(s) | 335, 408, 465, 595, 920 |
| BmrI | ACTGGG | 1 cut(s) | 972 |
| BmsI | GCATC | 3 cut(s) | 181, 668, 1076 |
| BmuI | ACTGGG | 1 cut(s) | 972 |
| BpiI | GAAGAC | 1 cut(s) | 355 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1026, 1058, 1162, 1194 |
| BpmI | CTGGAG | 2 cut(s) | 356, 806 |
| Bpu14I | TTCGAA | 1 cut(s) | 557 |
| BpuEI | CTTGAG | 2 cut(s) | 668, 1067 |
| BsaHI | GRCGYC | 1 cut(s) | 449 |
| BsaJI | CCNNGG | 4 cut(s) | 241, 407, 594, 1391 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 606, 636 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 408, 524 |
| Bse1I | ACTGG | 6 cut(s) | 570, 739, 789, 839, 978, 1272 |
| Bse21I | CCTNAGG | 2 cut(s) | 20, 1169 |
| Bse3DI | GCAATG | 1 cut(s) | 951 |
| BseBI | CCWGG | 5 cut(s) | 335, 408, 465, 595, 920 |
| BseDI | CCNNGG | 4 cut(s) | 241, 407, 594, 1391 |
| BseGI | GGATG | 4 cut(s) | 79, 237, 851, 1435 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 408, 524 |
| BseMI | GCAATG | 1 cut(s) | 951 |
| BseMII | CTCAG | 4 cut(s) | 11, 435, 966, 1160 |
| BseNI | ACTGG | 6 cut(s) | 570, 739, 789, 839, 978, 1272 |
| BseRI | GAGGAG | 1 cut(s) | 1401 |
| BseXI | GCAGC | 2 cut(s) | 844, 1512 |
| BseYI | CCCAGC | 1 cut(s) | 112 |
| Bsh1236I | CGCG | 1 cut(s) | 676 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1180 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 408, 524 |
| BsmAI | GTCTC | 3 cut(s) | 241, 440, 615 |
| BsmBI | CGTCTC | 1 cut(s) | 440 |
| Bsp119I | TTCGAA | 1 cut(s) | 557 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1180 |
| Bsp1407I | TGTACA | 1 cut(s) | 130 |
| Bsp143I | GATC | 6 cut(s) | 37, 835, 1036, 1072, 1091, 1252 |
| Bsp19I | CCATGG | 1 cut(s) | 1391 |
| BspACI | CCGC | 3 cut(s) | 29, 180, 1475 |
| BspCNI | CTCAG | 4 cut(s) | 12, 436, 965, 1161 |
| BspFNI | CGCG | 1 cut(s) | 676 |
| BspHI | TCATGA | 2 cut(s) | 82, 724 |
| BspLI | GGNNCC | 2 cut(s) | 534, 1112 |
| BspPI | GGATC | 2 cut(s) | 32, 830 |
| BspT104I | TTCGAA | 1 cut(s) | 557 |
| BspTI | CTTAAG | 1 cut(s) | 707 |
| BsrDI | GCAATG | 1 cut(s) | 951 |
| BsrGI | TGTACA | 1 cut(s) | 130 |
| BsrI | ACTGG | 6 cut(s) | 570, 739, 789, 839, 978, 1272 |
| BssECI | CCNNGG | 4 cut(s) | 241, 407, 594, 1391 |
| BssMI | GATC | 6 cut(s) | 37, 835, 1036, 1072, 1091, 1252 |
| BssNI | GRCGYC | 1 cut(s) | 449 |
| BssSI | CACGAG | 1 cut(s) | 1179 |
| BssT1I | CCWWGG | 2 cut(s) | 241, 1391 |
| Bst2BI | CACGAG | 1 cut(s) | 1179 |
| Bst2UI | CCWGG | 5 cut(s) | 335, 408, 465, 595, 920 |
| Bst4CI | ACNGT | 4 cut(s) | 252, 824, 831, 1486 |
| Bst6I | CTCTTC | 2 cut(s) | 918, 987 |
| BstACI | GRCGYC | 1 cut(s) | 449 |
| BstAFI | CTTAAG | 1 cut(s) | 707 |
| BstAUI | TGTACA | 1 cut(s) | 130 |
| BstBI | TTCGAA | 1 cut(s) | 557 |
| BstC8I | GCNNGC | 4 cut(s) | 184, 387, 1176, 1407 |
| BstDEI | CTNAG | 6 cut(s) | 20, 187, 444, 952, 1100, 1169 |
| BstDSI | CCRYGG | 1 cut(s) | 1391 |
| BstF5I | GGATG | 4 cut(s) | 79, 237, 851, 1435 |
| BstFNI | CGCG | 1 cut(s) | 676 |
| BstKTI | GATC | 6 cut(s) | 40, 838, 1039, 1075, 1094, 1255 |
| BstMAI | GTCTC | 3 cut(s) | 241, 440, 615 |
| BstMBI | GATC | 6 cut(s) | 37, 835, 1036, 1072, 1091, 1252 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 118, 1004 |
| BstNI | CCWGG | 5 cut(s) | 335, 408, 465, 595, 920 |
| BstNSI | RCATGY | 1 cut(s) | 305 |
| BstSCI | CCNGG | 5 cut(s) | 333, 406, 463, 593, 918 |
| BstUI | CGCG | 1 cut(s) | 676 |
| BstV1I | GCAGC | 2 cut(s) | 844, 1512 |
| BstV2I | GAAGAC | 1 cut(s) | 355 |
| BstX2I | RGATCY | 2 cut(s) | 37, 835 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 846 |
| BstYI | RGATCY | 2 cut(s) | 37, 835 |
| Bsu36I | CCTNAGG | 2 cut(s) | 20, 1169 |
| BtgI | CCRYGG | 1 cut(s) | 1391 |
| BtgZI | GCGATG | 1 cut(s) | 691 |
| BtsCI | GGATG | 4 cut(s) | 79, 237, 851, 1435 |
| BtsIMutI | CAGTG | 6 cut(s) | 99, 459, 563, 732, 782, 985 |
| Cac8I | GCNNGC | 4 cut(s) | 184, 387, 1176, 1407 |
| CaiI | CAGNNNCTG | 1 cut(s) | 152 |
| CciI | TCATGA | 2 cut(s) | 82, 724 |
| Csp6I | GTAC | 1 cut(s) | 131 |
| CviAII | CATG | 8 cut(s) | 83, 175, 302, 725, 1115, 1321, 1392, 1454 |
| CviQI | GTAC | 1 cut(s) | 131 |
| DdeI | CTNAG | 6 cut(s) | 20, 187, 444, 952, 1100, 1169 |
| DpnI | GATC | 6 cut(s) | 39, 837, 1038, 1074, 1093, 1254 |
| DpnII | GATC | 6 cut(s) | 37, 835, 1036, 1072, 1091, 1252 |
| DraI | TTTAAA | 1 cut(s) | 1215 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 359 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 359 |
| Eam1104I | CTCTTC | 2 cut(s) | 918, 987 |
| EarI | CTCTTC | 2 cut(s) | 918, 987 |
| EciI | GGCGGA | 1 cut(s) | 169 |
| Eco130I | CCWWGG | 2 cut(s) | 241, 1391 |
| Eco32I | GATATC | 2 cut(s) | 670, 730 |
| Eco57I | CTGAAG | 1 cut(s) | 744 |
| Eco81I | CCTNAGG | 2 cut(s) | 20, 1169 |
| EcoRII | CCWGG | 5 cut(s) | 333, 406, 463, 593, 918 |
| EcoRV | GATATC | 2 cut(s) | 670, 730 |
| EcoT14I | CCWWGG | 2 cut(s) | 241, 1391 |
| ErhI | CCWWGG | 2 cut(s) | 241, 1391 |
| Esp3I | CGTCTC | 1 cut(s) | 440 |
| FaeI | CATG | 8 cut(s) | 86, 178, 305, 728, 1118, 1324, 1395, 1457 |
| FatI | CATG | 8 cut(s) | 82, 174, 301, 724, 1114, 1320, 1391, 1453 |
| FbaI | TGATCA | 1 cut(s) | 1072 |
| Fnu4HI | GCNGC | 2 cut(s) | 858, 1501 |
| FokI | GGATG | 4 cut(s) | 86, 224, 858, 1442 |
| Fsp4HI | GCNGC | 2 cut(s) | 858, 1501 |
| FspBI | CTAG | 3 cut(s) | 51, 803, 1377 |
| GluI | GCNGC | 2 cut(s) | 858, 1501 |
| GsaI | CCCAGC | 1 cut(s) | 116 |
| GsuI | CTGGAG | 2 cut(s) | 356, 806 |
| Hin1I | GRCGYC | 1 cut(s) | 449 |
| Hin1II | CATG | 8 cut(s) | 86, 178, 305, 728, 1118, 1324, 1395, 1457 |
| HinfI | GANTC | 9 cut(s) | 149, 328, 468, 621, 767, 959, 1186, 1279, 1380 |
| HphI | GGTGA | 3 cut(s) | 323, 362, 1274 |
| Hpy166II | GTNNAC | 2 cut(s) | 235, 827 |
| Hpy188I | TCNGA | 9 cut(s) | 37, 148, 208, 327, 835, 1072, 1225, 1252, 1278 |
| Hpy8I | GTNNAC | 2 cut(s) | 235, 827 |
| HpyAV | CCTTC | 2 cut(s) | 768, 872 |
| HpyCH4III | ACNGT | 4 cut(s) | 252, 824, 831, 1486 |
| HpyCH4IV | ACGT | 2 cut(s) | 449, 965 |
| HpyCH4V | TGCA | 9 cut(s) | 140, 224, 395, 703, 944, 1007, 1140, 1320, 1368 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 118, 1004 |
| HpyF3I | CTNAG | 6 cut(s) | 20, 187, 444, 952, 1100, 1169 |
| HpySE526I | ACGT | 2 cut(s) | 449, 965 |
| Hsp92I | GRCGYC | 1 cut(s) | 449 |
| Hsp92II | CATG | 8 cut(s) | 86, 178, 305, 728, 1118, 1324, 1395, 1457 |
| Ksp22I | TGATCA | 1 cut(s) | 1072 |
| Kzo9I | GATC | 6 cut(s) | 37, 835, 1036, 1072, 1091, 1252 |
| LmnI | GCTCC | 4 cut(s) | 787, 979, 1169, 1414 |
| Lsp1109I | GCAGC | 2 cut(s) | 844, 1512 |
| LweI | GCATC | 3 cut(s) | 181, 668, 1076 |
| MaeI | CTAG | 3 cut(s) | 51, 803, 1377 |
| MaeII | ACGT | 2 cut(s) | 449, 965 |
| MaeIII | GTNAC | 3 cut(s) | 350, 454, 1465 |
| MalI | GATC | 6 cut(s) | 39, 837, 1038, 1074, 1093, 1254 |
| MboI | GATC | 6 cut(s) | 37, 835, 1036, 1072, 1091, 1252 |
| MboII | GAAGA | 6 cut(s) | 275, 353, 355, 935, 1004, 1281 |
| MfeI | CAATTG | 2 cut(s) | 791, 903 |
| MflI | RGATCY | 2 cut(s) | 37, 835 |
| MhlI | GDGCHC | 1 cut(s) | 1180 |
| MlyI | GAGTC | 1 cut(s) | 615 |
| MmeI | TCCRAC | 2 cut(s) | 510, 823 |
| MnlI | CCTC | 9 cut(s) | 15, 331, 573, 643, 695, 988, 1024, 1164, 1422 |
| MroXI | GAANNNNTTC | 1 cut(s) | 603 |
| MseI | TTAA | 8 cut(s) | 167, 708, 897, 1053, 1214, 1244, 1329, 1397 |
| MspCI | CTTAAG | 1 cut(s) | 707 |
| MspR9I | CCNGG | 5 cut(s) | 335, 408, 465, 595, 920 |
| MunI | CAATTG | 2 cut(s) | 791, 903 |
| MvaI | CCWGG | 5 cut(s) | 335, 408, 465, 595, 920 |
| MvnI | CGCG | 1 cut(s) | 676 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 118, 1004 |
| NcoI | CCATGG | 1 cut(s) | 1391 |
| NdeII | GATC | 6 cut(s) | 37, 835, 1036, 1072, 1091, 1252 |
| NlaIII | CATG | 8 cut(s) | 86, 178, 305, 728, 1118, 1324, 1395, 1457 |
| NlaIV | GGNNCC | 2 cut(s) | 534, 1112 |
| NmuCI | GTSAC | 3 cut(s) | 350, 454, 1465 |
| NspI | RCATGY | 1 cut(s) | 305 |
| NspV | TTCGAA | 1 cut(s) | 557 |
| PagI | TCATGA | 2 cut(s) | 82, 724 |
| PdmI | GAANNNNTTC | 1 cut(s) | 603 |
| PfeI | GAWTC | 8 cut(s) | 149, 328, 468, 767, 959, 1186, 1279, 1380 |
| PkrI | GCNGC | 2 cut(s) | 859, 1502 |
| PleI | GAGTC | 1 cut(s) | 615 |
| PpsI | GAGTC | 1 cut(s) | 615 |
| PshBI | ATTAAT | 2 cut(s) | 167, 1053 |
| PsiI | TTATAA | 1 cut(s) | 776 |
| Psp6I | CCWGG | 5 cut(s) | 333, 406, 463, 593, 918 |
| PspFI | CCCAGC | 1 cut(s) | 112 |
| PspGI | CCWGG | 5 cut(s) | 333, 406, 463, 593, 918 |
| PspN4I | GGNNCC | 2 cut(s) | 534, 1112 |
| PstNI | CAGNNNCTG | 1 cut(s) | 152 |
| PsuI | RGATCY | 2 cut(s) | 37, 835 |
| RsaI | GTAC | 1 cut(s) | 132 |
| RsaNI | GTAC | 1 cut(s) | 131 |
| SaqAI | TTAA | 8 cut(s) | 167, 708, 897, 1053, 1214, 1244, 1329, 1397 |
| SatI | GCNGC | 2 cut(s) | 858, 1501 |
| Sau3AI | GATC | 6 cut(s) | 37, 835, 1036, 1072, 1091, 1252 |
| SchI | GAGTC | 1 cut(s) | 615 |
| ScrFI | CCNGG | 5 cut(s) | 335, 408, 465, 595, 920 |
| SduI | GDGCHC | 1 cut(s) | 1180 |
| SfaNI | GCATC | 3 cut(s) | 181, 668, 1076 |
| SfuI | TTCGAA | 1 cut(s) | 557 |
| SmlI | CTYRAG | 3 cut(s) | 647, 707, 1082 |
| SmoI | CTYRAG | 3 cut(s) | 647, 707, 1082 |
| SsiI | CCGC | 3 cut(s) | 29, 180, 1475 |
| SspI | AATATT | 2 cut(s) | 439, 1148 |
| SspMI | CTAG | 3 cut(s) | 51, 803, 1377 |
| StyD4I | CCNGG | 5 cut(s) | 333, 406, 463, 593, 918 |
| StyI | CCWWGG | 2 cut(s) | 241, 1391 |
| TaaI | ACNGT | 4 cut(s) | 252, 824, 831, 1486 |
| TaiI | ACGT | 2 cut(s) | 452, 968 |
| TaqI | TCGA | 5 cut(s) | 196, 557, 741, 1063, 1201 |
| TatI | WGTACW | 1 cut(s) | 130 |
| TfiI | GAWTC | 8 cut(s) | 149, 328, 468, 767, 959, 1186, 1279, 1380 |
| Tru1I | TTAA | 8 cut(s) | 167, 708, 897, 1053, 1214, 1244, 1329, 1397 |
| Tru9I | TTAA | 8 cut(s) | 167, 708, 897, 1053, 1214, 1244, 1329, 1397 |
| TscAI | CASTG | 6 cut(s) | 106, 459, 570, 739, 789, 985 |
| TseFI | GTSAC | 3 cut(s) | 350, 454, 1465 |
| TseI | GCWGC | 2 cut(s) | 857, 1500 |
| Tsp45I | GTSAC | 3 cut(s) | 350, 454, 1465 |
| TspDTI | ATGAA | 9 cut(s) | 90, 648, 713, 736, 1131, 1141, 1178, 1278, 1347 |
| TspGWI | ACGGA | 1 cut(s) | 386 |
| TspRI | CASTG | 6 cut(s) | 106, 459, 570, 739, 789, 985 |
| Vha464I | CTTAAG | 1 cut(s) | 707 |
| VspI | ATTAAT | 2 cut(s) | 167, 1053 |
| XapI | RAATTY | 3 cut(s) | 635, 1123, 1197 |
| XceI | RCATGY | 1 cut(s) | 305 |
| XmnI | GAANNNNTTC | 1 cut(s) | 603 |
| XspI | CTAG | 3 cut(s) | 51, 803, 1377 |
| ZraI | GACGTC | 1 cut(s) | 450 |