Rh6BG260300

ATP-dependent RNA helicase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0002639
Physical Location & Seq
Reverse (-)
47400478 .. 47404815
4338 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG260300.1

Sequence Viewer

Length: 1674 bp
ATGTTGGATTGCACTTTCAGGGAAGCGGTATCAGATCCATCTCTCTCTAGGTATTCAGCTATCATTGTGGATGAAGCTCATGAGAGAACTCTTGACACTGATGTATTGCTGGGTGTGCTGAAAAATGTACAAAATGCAAGGTCAGAATCTGTTGAATTGAAATTAATTATCATGTCCGCCAGCTTAGATGCTCGAATTTTCTCCGAATACTTTGGTGGTGCAAGAGCTGTTCACATCCAAGGGAGACAGTTTCCTGTTGCTATATTTTATACTTATCATCTTCCACCATCTTATTTACATGCTTCGTTCATTACCATATTTCAGATTCACCTGGAGGAAGAAGCTGGTGACATACTTGTCTTCTTGACCGGTAAAGACGAAATTGAATTCGTAGAAAGACTTATCGAAGAAAAACTTAAACAGTTACCGGAGAATAGTCAAAAACTAGTAGCGGTACCTTTATTTTCATCTCTTCCGTCAGAACAGCAAATGCGAGCTTTTGCACCAGCCTGTCCTGGGTTTCGTAAGGTAGTTTTGGCAACCAATATTGCTGAGACGTCAGTGACAATACCTGGAATCAAGTATGTTATAGACACTGGGGTTGTAAAAGCACACTTCTATAATCCAAACAAAGGGCTGGAACCTTTGATTGTTGTTCCAATTTCGAAAGCACAGGCTCTACAAAGGAGTTGGCGTGCAGGGAGAGAAAGACCAGGGAAATGCTTCTGTCTCTACCCAGAGAATGAATTTTGGAAACTTGAGGATTCAACAAAGCCAGATATCAAGCGGTGCGACCTCTCTAATGCCATTTTGCAACTTAAGGCTTTGGGTGTTCATGATATCACTGGTTTCGACTTCATAGAAAAACCTTCAGGGGAATCTATTATAAAATCACTGGAGCAATTGACCCTGCTAGGTGCTTTGGCAGATGACCGTAAACTGTCAGATCCAGTTGGATGGCAAATGGCTGCCCTTCCCCTACCCCCTATTTATTCAAAAGCTCTAATTAAAGCAAGTGAACTCAACTGCCTGGAAGAGATGTTGATAACTGTTGCAATGCTCTCAGTAGAATCTACGTTTTTCACTTCCCGTGAGAAGTTAGAAGAGGCGAGAACTGCAATGAAACGCTTTGAAAGTCCAGAGGGAGATCATCTCACTTTGATTAATCTATATCGAGCATCTGATCAGTTTCTCAAGAGTAGATCAGGTCTTAGCACAGGGAACCATGAACAAAATTTCCAGAAATGGTGCAAGGAATATTTCATTGATAGTTGCTCCCTGAGGCGTGCTCGTGAGATTCATAGCCAAATTCGAGAAAGTGTTGAACAAATGGGCCTCTGTGTTGCATCTTGTGGGGACAACATGCTTCAGTTTCGTAGATGTCTTGCTGCTTCTTTCTTCCTCAGAGTAGCTTTAAAGCAATCTGATGGAGAACACAGGGTTTTAACATCTGATCTGGCAAATGAACTGGTTGTTCAGATTCACCCATCTTCTGTGCTGTCCCAGAAAAAACCAGAGTGCATAGTTTTCAATGAACTAGTTGAAACTAATGACAAAAGGTTTATCTGCAACACGACTACAATCAACTATCCATGGTTAAGTGAGCTTGCTCCTCCACGACTAAAAAAGGTATGGGAAAGACACAAGCTACCTTGGATCTCTAATTGCAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000182 GO:0001817 GO:0001819 GO:0001932 GO:0001934 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003723 GO:0003724 GO:0003725 GO:0003729 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006355 GO:0006356 GO:0006396 GO:0006412 GO:0006413 GO:0006518 GO:0006725 GO:0006807 GO:0008026 GO:0008134 GO:0008150 GO:0008152 GO:0008186 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010562 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019220 GO:0019222 GO:0019538 GO:0023051 GO:0023056 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031334 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032479 GO:0032481 GO:0032991 GO:0033613 GO:0034641 GO:0034645 GO:0042325 GO:0042327 GO:0042623 GO:0043021 GO:0043023 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043254 GO:0043408 GO:0043410 GO:0043484 GO:0043565 GO:0043603 GO:0043604 GO:0044087 GO:0044089 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0044877 GO:0045893 GO:0045935 GO:0045937 GO:0045943 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0051090 GO:0051091 GO:0051092 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051174 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0060255 GO:0061702 GO:0065007 GO:0065009 GO:0070013 GO:0070035 GO:0071704 GO:0072559 GO:0080090 GO:0090304 GO:0097159 GO:0140098 GO:1900225 GO:1900227 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1902531 GO:1902533 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03040 ko03050 ko05169 map03040 map03050 map05169
Pfam Domains
Protein Families
DEAD HA2 Helicase_C OB_NTP_bind

Protein Analysis

557

Amino Acids

63.07

Weight (kDa)

6.39

Isoelectric Point (pI)

48.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Helicase_C PF00271 108 - 235 4.4e-10 Helicase conserved C-terminal domain
WHD_HA2 PF04408 298 - 327 9.7e-06 Helicase associated domain (HA2), winged-helix
HA2_C PF21010 328 - 387 1.1e-11 Helicase associated domain (HA2), ratchet-like
OB_NTP_bind PF07717 459 - 538 1.8e-16 Oligonucleotide/oligosaccharide-binding (OB)-fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 887
AasI GACNNNNNNGTC 1 cut(s) 356
AatII GACGTC 1 cut(s) 560
Acc65I GGTACC 1 cut(s) 454
AccB1I GGYRCC 1 cut(s) 454
AciI CCGC 4 cut(s) 26, 177, 452, 787
AclWI GGATC 3 cut(s) 29, 941, 1664
AcsI RAATTY 5 cut(s) 195, 386, 746, 1234, 1308
AcuI CTGAAG 2 cut(s) 855, 1352
AcyI GRCGYC 1 cut(s) 557
AfaI GTAC 2 cut(s) 129, 456
AfiI CCNNNNNNNGG 2 cut(s) 516, 632
AflII CTTAAG 1 cut(s) 818
AgeI ACCGGT 1 cut(s) 368
AgsI TTSAA 9 cut(s) 155, 160, 386, 768, 996, 1133, 1325, 1531, 1544
AhlI ACTAGT 2 cut(s) 445, 1537
AjnI CCWGG 5 cut(s) 330, 514, 571, 712, 1029
AloI GAACNNNNNNTCC 2 cut(s) 1221, 1253
Alw21I GWGCWC 1 cut(s) 1291
Alw26I GTCTC 3 cut(s) 238, 548, 734
AlwI GGATC 3 cut(s) 29, 941, 1664
AlwNI CAGNNNCTG 1 cut(s) 149
AoxI GGCC 1 cut(s) 1333
ApeKI GCWGC 2 cut(s) 968, 1388
ApoI RAATTY 5 cut(s) 195, 386, 746, 1234, 1308
AseI ATTAAT 2 cut(s) 164, 1164
AsiGI ACCGGT 1 cut(s) 368
Asp700I GAANNNNTTC 1 cut(s) 722
Asp718I GGTACC 1 cut(s) 454
AspS9I GGNCC 1 cut(s) 1333
AsuHPI GGTGA 3 cut(s) 320, 359, 1475
AsuII TTCGAA 1 cut(s) 665
AxyI CCTNAGG 1 cut(s) 1280
BanI GGYRCC 1 cut(s) 454
BauI CACGAG 1 cut(s) 1290
BbsI GAAGAC 1 cut(s) 352
Bbv12I GWGCWC 1 cut(s) 1291
BbvI GCAGC 2 cut(s) 955, 1375
BccI CCATC 5 cut(s) 46, 295, 951, 1421, 1495
BciT130I CCWGG 5 cut(s) 332, 516, 573, 714, 1031
BclI TGATCA 1 cut(s) 1183
BcoDI GTCTC 3 cut(s) 238, 548, 734
BcuI ACTAGT 2 cut(s) 445, 1537
BfaI CTAG 4 cut(s) 48, 446, 914, 1538
BfrI CTTAAG 1 cut(s) 818
BisI GCNGC 2 cut(s) 969, 1389
BlsI GCNGC 2 cut(s) 970, 1390
Bme1390I CCNGG 5 cut(s) 332, 516, 573, 714, 1031
BmgT120I GGNCC 1 cut(s) 1333
BmiI GGNNCC 3 cut(s) 456, 642, 1223
BmrFI CCNGG 5 cut(s) 332, 516, 573, 714, 1031
BmrI ACTGGG 1 cut(s) 606
BmsI GCATC 3 cut(s) 178, 1187, 1355
BmuI ACTGGG 1 cut(s) 606
BpiI GAAGAC 1 cut(s) 352
BplI GAGNNNNNCTC 4 cut(s) 1137, 1169, 1273, 1305
BpmI CTGGAG 2 cut(s) 353, 917
Bpu14I TTCGAA 1 cut(s) 665
BpuEI CTTGAG 2 cut(s) 779, 1178
BsaHI GRCGYC 1 cut(s) 557
BsaJI CCNNGG 5 cut(s) 238, 515, 713, 1592, 1652
BsaWI WCCGGW 2 cut(s) 368, 427
BsaXI ACNNNNNCTCC 2 cut(s) 679, 709
Bsc4I CCNNNNNNNGG 2 cut(s) 516, 632
Bse118I RCCGGY 1 cut(s) 368
Bse1I ACTGG 5 cut(s) 601, 850, 900, 950, 1473
Bse21I CCTNAGG 1 cut(s) 1280
Bse3DI GCAATG 2 cut(s) 1062, 1125
BseBI CCWGG 5 cut(s) 332, 516, 573, 714, 1031
BseDI CCNNGG 5 cut(s) 238, 515, 713, 1592, 1652
BseGI GGATG 3 cut(s) 76, 234, 962
BseLI CCNNNNNNNGG 2 cut(s) 516, 632
BseMI GCAATG 2 cut(s) 1062, 1125
BseMII CTCAG 4 cut(s) 543, 1077, 1271, 1417
BseNI ACTGG 5 cut(s) 601, 850, 900, 950, 1473
BseRI GAGGAG 1 cut(s) 1602
BseXI GCAGC 2 cut(s) 955, 1375
BseYI CCCAGC 1 cut(s) 109
BsgI GTGCAG 1 cut(s) 717
BshFI GGCC 1 cut(s) 1335
BshNI GGYRCC 1 cut(s) 454
BshTI ACCGGT 1 cut(s) 368
BsiHKAI GWGCWC 1 cut(s) 1291
BsiSI CCGG 2 cut(s) 369, 428
BslFI GGGAC 2 cut(s) 1370, 1486
BslI CCNNNNNNNGG 2 cut(s) 516, 632
BsmAI GTCTC 3 cut(s) 238, 548, 734
BsmBI CGTCTC 1 cut(s) 548
BsmFI GGGAC 2 cut(s) 1370, 1486
BsnI GGCC 1 cut(s) 1335
Bsp119I TTCGAA 1 cut(s) 665
Bsp1286I GDGCHC 1 cut(s) 1291
Bsp1407I TGTACA 1 cut(s) 127
Bsp143I GATC 7 cut(s) 34, 946, 1147, 1183, 1202, 1453, 1656
Bsp19I CCATGG 1 cut(s) 1592
BspACI CCGC 4 cut(s) 26, 177, 452, 787
BspANI GGCC 1 cut(s) 1335
BspCNI CTCAG 4 cut(s) 544, 1076, 1272, 1416
BspHI TCATGA 2 cut(s) 79, 835
BspLI GGNNCC 3 cut(s) 456, 642, 1223
BspPI GGATC 3 cut(s) 29, 941, 1664
BspT104I TTCGAA 1 cut(s) 665
BspT107I GGYRCC 1 cut(s) 454
BspTI CTTAAG 1 cut(s) 818
BsrDI GCAATG 2 cut(s) 1062, 1125
BsrFI RCCGGY 1 cut(s) 368
BsrGI TGTACA 1 cut(s) 127
BsrI ACTGG 5 cut(s) 601, 850, 900, 950, 1473
BssAI RCCGGY 1 cut(s) 368
BssECI CCNNGG 5 cut(s) 238, 515, 713, 1592, 1652
BssMI GATC 7 cut(s) 34, 946, 1147, 1183, 1202, 1453, 1656
BssNI GRCGYC 1 cut(s) 557
BssSI CACGAG 1 cut(s) 1290
BssT1I CCWWGG 3 cut(s) 238, 1592, 1652
Bst2BI CACGAG 1 cut(s) 1290
Bst2UI CCWGG 5 cut(s) 332, 516, 573, 714, 1031
Bst4CI ACNGT 5 cut(s) 249, 423, 935, 942, 1051
Bst6I CTCTTC 3 cut(s) 477, 1029, 1098
BstACI GRCGYC 1 cut(s) 557
BstAFI CTTAAG 1 cut(s) 818
BstAUI TGTACA 1 cut(s) 127
BstBI TTCGAA 1 cut(s) 665
BstC8I GCNNGC 5 cut(s) 181, 495, 696, 1287, 1608
BstDEI CTNAG 6 cut(s) 184, 552, 1063, 1211, 1280, 1403
BstDSI CCRYGG 1 cut(s) 1592
BstF5I GGATG 3 cut(s) 76, 234, 962
BstKTI GATC 7 cut(s) 37, 949, 1150, 1186, 1205, 1456, 1659
BstMAI GTCTC 3 cut(s) 238, 548, 734
BstMBI GATC 7 cut(s) 34, 946, 1147, 1183, 1202, 1453, 1656
BstMWI GCNNNNNNNGC 2 cut(s) 115, 1115
BstNI CCWGG 5 cut(s) 332, 516, 573, 714, 1031
BstNSI RCATGY 2 cut(s) 302, 1366
BstSCI CCNGG 5 cut(s) 330, 514, 571, 712, 1029
BstV1I GCAGC 2 cut(s) 955, 1375
BstV2I GAAGAC 1 cut(s) 352
BstX2I RGATCY 3 cut(s) 34, 946, 1656
BstXI CCANNNNNNTGG 1 cut(s) 957
BstYI RGATCY 3 cut(s) 34, 946, 1656
Bsu36I CCTNAGG 1 cut(s) 1280
BsuRI GGCC 1 cut(s) 1335
BtgI CCRYGG 1 cut(s) 1592
BtsCI GGATG 3 cut(s) 76, 234, 962
BtsIMutI CAGTG 5 cut(s) 96, 567, 594, 843, 893
Cac8I GCNNGC 5 cut(s) 181, 495, 696, 1287, 1608
CaiI CAGNNNCTG 1 cut(s) 149
CciI TCATGA 2 cut(s) 79, 835
Cfr10I RCCGGY 1 cut(s) 368
Cfr13I GGNCC 1 cut(s) 1333
Csp6I GTAC 2 cut(s) 128, 455
CspAI ACCGGT 1 cut(s) 368
CviAII CATG 7 cut(s) 80, 172, 299, 836, 1226, 1363, 1593
CviQI GTAC 2 cut(s) 128, 455
DdeI CTNAG 6 cut(s) 184, 552, 1063, 1211, 1280, 1403
DpnI GATC 7 cut(s) 36, 948, 1149, 1185, 1204, 1455, 1658
DpnII GATC 7 cut(s) 34, 946, 1147, 1183, 1202, 1453, 1656
DraI TTTAAA 1 cut(s) 1416
DrdI GACNNNNNNGTC 1 cut(s) 356
DseDI GACNNNNNNGTC 1 cut(s) 356
Eam1104I CTCTTC 3 cut(s) 477, 1029, 1098
EarI CTCTTC 3 cut(s) 477, 1029, 1098
EciI GGCGGA 1 cut(s) 166
Eco130I CCWWGG 3 cut(s) 238, 1592, 1652
Eco32I GATATC 2 cut(s) 781, 841
Eco57I CTGAAG 2 cut(s) 855, 1352
Eco81I CCTNAGG 1 cut(s) 1280
EcoRI GAATTC 1 cut(s) 386
EcoRII CCWGG 5 cut(s) 330, 514, 571, 712, 1029
EcoRV GATATC 2 cut(s) 781, 841
EcoT14I CCWWGG 3 cut(s) 238, 1592, 1652
ErhI CCWWGG 3 cut(s) 238, 1592, 1652
Esp3I CGTCTC 1 cut(s) 548
FaeI CATG 7 cut(s) 83, 175, 302, 839, 1229, 1366, 1596
FalI AAGNNNNNCTT 2 cut(s) 399, 431
FaqI GGGAC 2 cut(s) 1370, 1486
FatI CATG 7 cut(s) 79, 171, 298, 835, 1225, 1362, 1592
FbaI TGATCA 1 cut(s) 1183
Fnu4HI GCNGC 2 cut(s) 969, 1389
FokI GGATG 3 cut(s) 83, 221, 969
Fsp4HI GCNGC 2 cut(s) 969, 1389
FspBI CTAG 4 cut(s) 48, 446, 914, 1538
GluI GCNGC 2 cut(s) 969, 1389
GsaI CCCAGC 1 cut(s) 113
GsuI CTGGAG 2 cut(s) 353, 917
HaeIII GGCC 1 cut(s) 1335
HapII CCGG 2 cut(s) 369, 428
Hin1I GRCGYC 1 cut(s) 557
Hin1II CATG 7 cut(s) 83, 175, 302, 839, 1229, 1366, 1596
HinfI GANTC 8 cut(s) 146, 325, 576, 764, 878, 1070, 1297, 1480
HpaII CCGG 2 cut(s) 369, 428
HphI GGTGA 3 cut(s) 320, 359, 1475
Hpy166II GTNNAC 3 cut(s) 232, 938, 1019
Hpy188III TCNNGA 9 cut(s) 80, 92, 364, 836, 1139, 1195, 1240, 1292, 1313
Hpy8I GTNNAC 3 cut(s) 232, 938, 1019
HpyAV CCTTC 2 cut(s) 879, 983
HpyCH4III ACNGT 5 cut(s) 249, 423, 935, 942, 1051
HpyCH4IV ACGT 2 cut(s) 557, 1076
HpyF10VI GCNNNNNNNGC 2 cut(s) 115, 1115
HpyF3I CTNAG 6 cut(s) 184, 552, 1063, 1211, 1280, 1403
HpySE526I ACGT 2 cut(s) 557, 1076
Hsp92I GRCGYC 1 cut(s) 557
Hsp92II CATG 7 cut(s) 83, 175, 302, 839, 1229, 1366, 1596
KpnI GGTACC 1 cut(s) 458
Ksp22I TGATCA 1 cut(s) 1183
Kzo9I GATC 7 cut(s) 34, 946, 1147, 1183, 1202, 1453, 1656
LmnI GCTCC 3 cut(s) 898, 1280, 1615
Lsp1109I GCAGC 2 cut(s) 955, 1375
LweI GCATC 3 cut(s) 178, 1187, 1355
MaeI CTAG 4 cut(s) 48, 446, 914, 1538
MaeII ACGT 2 cut(s) 557, 1076
MaeIII GTNAC 3 cut(s) 347, 423, 562
MalI GATC 7 cut(s) 36, 948, 1149, 1185, 1204, 1455, 1658
MboI GATC 7 cut(s) 34, 946, 1147, 1183, 1202, 1453, 1656
MboII GAAGA 9 cut(s) 272, 350, 352, 419, 464, 1046, 1115, 1390, 1482
MfeI CAATTG 1 cut(s) 902
MflI RGATCY 3 cut(s) 34, 946, 1656
MhlI GDGCHC 1 cut(s) 1291
MmeI TCCRAC 1 cut(s) 934
MnlI CCTC 9 cut(s) 328, 754, 806, 1099, 1135, 1275, 1346, 1412, 1623
MroXI GAANNNNTTC 1 cut(s) 722
MseI TTAA 8 cut(s) 164, 417, 819, 1008, 1164, 1415, 1445, 1598
MspCI CTTAAG 1 cut(s) 818
MspI CCGG 2 cut(s) 369, 428
MspR9I CCNGG 5 cut(s) 332, 516, 573, 714, 1031
MunI CAATTG 1 cut(s) 902
MvaI CCWGG 5 cut(s) 332, 516, 573, 714, 1031
MwoI GCNNNNNNNGC 2 cut(s) 115, 1115
NcoI CCATGG 1 cut(s) 1592
NdeII GATC 7 cut(s) 34, 946, 1147, 1183, 1202, 1453, 1656
NlaIII CATG 7 cut(s) 83, 175, 302, 839, 1229, 1366, 1596
NlaIV GGNNCC 3 cut(s) 456, 642, 1223
NmuCI GTSAC 2 cut(s) 347, 562
NspI RCATGY 2 cut(s) 302, 1366
NspV TTCGAA 1 cut(s) 665
PagI TCATGA 2 cut(s) 79, 835
PdmI GAANNNNTTC 1 cut(s) 722
PfeI GAWTC 8 cut(s) 146, 325, 576, 764, 878, 1070, 1297, 1480
PinAI ACCGGT 1 cut(s) 368
PkrI GCNGC 2 cut(s) 970, 1390
PshBI ATTAAT 2 cut(s) 164, 1164
PsiI TTATAA 1 cut(s) 887
Psp6I CCWGG 5 cut(s) 330, 514, 571, 712, 1029
PspFI CCCAGC 1 cut(s) 109
PspGI CCWGG 5 cut(s) 330, 514, 571, 712, 1029
PspN4I GGNNCC 3 cut(s) 456, 642, 1223
PspPI GGNCC 1 cut(s) 1333
PstNI CAGNNNCTG 1 cut(s) 149
PsuI RGATCY 3 cut(s) 34, 946, 1656
RsaI GTAC 2 cut(s) 129, 456
RsaNI GTAC 2 cut(s) 128, 455
SaqAI TTAA 8 cut(s) 164, 417, 819, 1008, 1164, 1415, 1445, 1598
SatI GCNGC 2 cut(s) 969, 1389
Sau3AI GATC 7 cut(s) 34, 946, 1147, 1183, 1202, 1453, 1656
Sau96I GGNCC 1 cut(s) 1333
ScrFI CCNGG 5 cut(s) 332, 516, 573, 714, 1031
SduI GDGCHC 1 cut(s) 1291
SfaNI GCATC 3 cut(s) 178, 1187, 1355
SfuI TTCGAA 1 cut(s) 665
SmlI CTYRAG 3 cut(s) 758, 818, 1193
SmoI CTYRAG 3 cut(s) 758, 818, 1193
SpeI ACTAGT 2 cut(s) 445, 1537
SsiI CCGC 4 cut(s) 26, 177, 452, 787
SspI AATATT 2 cut(s) 547, 1259
SspMI CTAG 4 cut(s) 48, 446, 914, 1538
StyD4I CCNGG 5 cut(s) 330, 514, 571, 712, 1029
StyI CCWWGG 3 cut(s) 238, 1592, 1652
TaaI ACNGT 5 cut(s) 249, 423, 935, 942, 1051
TaiI ACGT 2 cut(s) 560, 1079
TaqI TCGA 6 cut(s) 193, 405, 665, 852, 1174, 1312
TatI WGTACW 1 cut(s) 127
TfiI GAWTC 8 cut(s) 146, 325, 576, 764, 878, 1070, 1297, 1480
Tru1I TTAA 8 cut(s) 164, 417, 819, 1008, 1164, 1415, 1445, 1598
Tru9I TTAA 8 cut(s) 164, 417, 819, 1008, 1164, 1415, 1445, 1598
TscAI CASTG 5 cut(s) 103, 567, 601, 850, 900
TseFI GTSAC 2 cut(s) 347, 562
TseI GCWGC 2 cut(s) 968, 1388
Tsp45I GTSAC 2 cut(s) 347, 562
TspGWI ACGGA 1 cut(s) 465
TspRI CASTG 5 cut(s) 103, 567, 601, 850, 900
Vha464I CTTAAG 1 cut(s) 818
VspI ATTAAT 2 cut(s) 164, 1164
XapI RAATTY 5 cut(s) 195, 386, 746, 1234, 1308
XceI RCATGY 2 cut(s) 302, 1366
XmnI GAANNNNTTC 1 cut(s) 722
XspI CTAG 4 cut(s) 48, 446, 914, 1538
ZraI GACGTC 1 cut(s) 558
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.