Prupe.1G288500_v2.0.a1

ATP-dependent RNA helicase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0002639
Physical Location & Seq
Forward (+)
28800147 .. 28805409
5263 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G288500.5

Sequence Viewer

Length: 2214 bp
ATGGCTCAAGGTCAAGGACGGCTGAACAGCTCTACCAAAAGCCCGAAAGGAAACTTGTCCGATGGTAATCGCAAGCTTGATGCCTTTTCCAAGAGGCAAACGCTTGCGCAGCACAGGAAGTCTCTTCCAATCGCTTCTGTGGATAAACGACTGGTTGAGGAGGTTCAGAAGCACGATACTTTGATTATTGTTGGTGAAACTGGAAGCGGAAAAACAACACAATTACCTCAGTTTTTGTACAATGCTGGGTTTTGCGGGGATGGGAAACTCATTGGGATAACTCAACCCAGGCGTGTGGCTGCCGTGACTGTGGCAAAACGGGTTGCTGAGGAATGTGGCGTAAATTTGGGTGAAAAGGTTGGTTACTCCATCAGATTTGAGGACATGACCTCTAGTTCGACAAGGATCAAGTACATGACAGATGGATTGCTACTGAGGGAAGCACTGTTGGATCCACATCTCTCTAGGTATTCAGTCATAATTGTTGATGAAGCTCATGAGAGAACTGTCCACACTGATGTGTTGCTAGGATTGCTAAAAAGCGTACAAGATGCAAGGTCAAAATCCCTCAATAACCTCCAAAATACTAAAAACAAGAAAACAAATAATGACATACAATTGAAAGAAAACGGTGCTCAGGGCCTCAATTTTCTCAAGCAATACCAAGGAAGGACCCCGTTGAAGTTAATTATCATGTCTGCTAGCTTGGATGCACGAATTTTCTCCGAGTACTTCAGTGGTGCCAGAGCTGTTCACATCCAAGGGCGACAGTTTCCTGTGGATATATTTTATACTCTTCATGTTGAAAATGATTATCTAGATGCTTCGTTAGCCACCATATTTCAGATTCATCTGGAGGAGGGCCCTGGTGATATACTTGTATTCTTGACGGGTCAAGAAGAAATCGAATCTGTAGAAAGACTTGTCAAAGAAAGACTTAAACAGTTACCAGAAAACAGTAAAAAACTAGTGGCTGTTTCTATATTCTCATCTCTTCCTTCAGAACAGCAAATGCGAGTTTTTGCACCAGCCCCTCCTGGATTTCGTAAGGTAATATTGGCAACGAATATTGCTGAGACATCAGTGACAATATCTGGAATAAAGTACGTTATAGATCCTGGGTTAGTAAAAGCACGTTACTATGACCCAAACAAAGGGTTGGAATCTTTGGTTGTTGTTCCAATTTCAAAAGCACAAGCTCTTCAAAGGAGTGGGCGTGCAGGGCGAGAAGGACCAGGGAAGTGCTTCCGCCTCTACCAAGAGGATCAATTTGGGAAATTTGAGGATTCAACAAAGCCAGAGATCAAGCGGTGCAACCTCTCTAATATCATTTTGCAACTTAAGGCCCTGGGTGTTGATGATATCAGTGGATTTGACTTCATAGAAAAGCCTACAAGGTCGGCTATTGTCAAATCACTAGAGCAATTGTTCCTGCTGGGTGCTTTAACAGATGACTGTAAATTATCAAATCCAGTTGGACGCCAAATGGCTTGCCTTCCCTTAGACCCAATTTATTCAAAAGCTCTAATCCTAGCGAGTGAATTCAATTGCCTGGAAGAGATGCTGATAACTGTTGCAATGCTCTCAGTAGAATCTATATTTTATAGTCCCCGTGACAAAAAAGAAGAGTCGAGAACTACAAAGAAATCCTTTGCAAGTCCAGAGGGAGACCATCTCACTTTGGTTAATGTATATAGAGCGTCCAATGAGTTCTTGGAAAAGAGATCAGGTCTTAGTAAAGAGAAGCGTGAAAAAGCTTTCCGAAAATGGTGCAAGGAAAATTTCATTGATAGTCGCTCCCTGAGGCATGCTCGTGACATTCACAGCCAAATTCGACGAAATGTTGAACAAATGGGTCTTCGTGTTGCCTCTTGTGGTGACGACGTGCTTCAGTTTTGCAGATGCCTTGCAGCTTCTTTCTTCCTCAATGCAGCTTTAAAGCAGCCTGAGGGATCATACAGGGCTTTAGCAAACGAATTAAATGTACTGCGGAGAGGTATGCTTATTGGATTATTTGGGAATGCTGTTGTTGGATTCATTATCTGTAAACCTCCAGTTCTAATCTTCTTCTCTTCGGTCTTGGCTATAGATGATATAGGTATGAACAAGATACTTTCCACCTTGGATGTAATGTCATATAACTTGTTTGAAAGCTCTACTCTGGCTCTCCTATTTCGATGCCTGATCCTGACATGCAACAAGGACAGTGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000182 GO:0001817 GO:0001819 GO:0001932 GO:0001934 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003723 GO:0003724 GO:0003725 GO:0003729 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006355 GO:0006356 GO:0006396 GO:0006412 GO:0006413 GO:0006518 GO:0006725 GO:0006807 GO:0008026 GO:0008134 GO:0008150 GO:0008152 GO:0008186 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010562 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019220 GO:0019222 GO:0019538 GO:0023051 GO:0023056 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031334 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032479 GO:0032481 GO:0032991 GO:0033613 GO:0034641 GO:0034645 GO:0042325 GO:0042327 GO:0042623 GO:0043021 GO:0043023 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043254 GO:0043408 GO:0043410 GO:0043484 GO:0043565 GO:0043603 GO:0043604 GO:0044087 GO:0044089 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0044877 GO:0045893 GO:0045935 GO:0045937 GO:0045943 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0051090 GO:0051091 GO:0051092 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051174 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0060255 GO:0061702 GO:0065007 GO:0065009 GO:0070013 GO:0070035 GO:0071704 GO:0072559 GO:0080090 GO:0090304 GO:0097159 GO:0140098 GO:1900225 GO:1900227 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1902531 GO:1902533 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03040 ko03050 ko05169 map03040 map03050 map05169
Pfam Domains
Protein Families
DEAD HA2 Helicase_C OB_NTP_bind

Protein Analysis

738

Amino Acids

82.11

Weight (kDa)

9.08

Isoelectric Point (pI)

43.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 108
AccB1I GGYRCC 1 cut(s) 740
AciI CCGC 5 cut(s) 207, 255, 1249, 1309, 1990
AclWI GGATC 7 cut(s) 413, 446, 459, 1109, 1272, 1960, 2179
AcsI RAATTY 6 cut(s) 343, 717, 1277, 1541, 1780, 1830
AcuI CTGAAG 3 cut(s) 718, 984, 1874
AcyI GRCGYC 1 cut(s) 1480
AfaI GTAC 6 cut(s) 239, 413, 546, 731, 1106, 1986
AfiI CCNNNNNNNGG 1 cut(s) 1154
AflII CTTAAG 1 cut(s) 1340
AhlI ACTAGT 1 cut(s) 967
AjiI CACGTC 1 cut(s) 1885
AjnI CCWGG 7 cut(s) 287, 865, 1036, 1117, 1234, 1347, 1551
AleI CACNNNNGTG 1 cut(s) 518
Alw21I GWGCWC 1 cut(s) 637
Alw26I GTCTC 3 cut(s) 126, 1070, 1662
AlwI GGATC 7 cut(s) 413, 446, 459, 1109, 1272, 1960, 2179
AoxI GGCC 3 cut(s) 640, 862, 1344
ApaI GGGCCC 1 cut(s) 866
ApeKI GCWGC 5 cut(s) 109, 299, 1910, 1931, 1942
ApoI RAATTY 6 cut(s) 343, 717, 1277, 1541, 1780, 1830
ArsI GACNNNNNNTTYG 2 cut(s) 379, 411
Asp700I GAANNNNTTC 1 cut(s) 1244
AspLEI GCGC 1 cut(s) 109
AspS9I GGNCC 6 cut(s) 640, 672, 862, 863, 1232, 1345
AsuHPI GGTGA 4 cut(s) 206, 362, 881, 1889
AsuNHI GCTAGC 1 cut(s) 701
AvaII GGWCC 2 cut(s) 672, 1232
AxyI CCTNAGG 2 cut(s) 1802, 1947
BaeGI GKGCMC 1 cut(s) 866
BamHI GGATCC 1 cut(s) 451
BanI GGYRCC 1 cut(s) 740
BanII GRGCYC 1 cut(s) 866
BauI CACGAG 1 cut(s) 1812
BbsI GAAGAC 1 cut(s) 1850
Bbv12I GWGCWC 1 cut(s) 637
BbvCI CCTCAGC 1 cut(s) 327
BbvI GCAGC 5 cut(s) 121, 286, 1922, 1943, 1954
BccI CCATC 5 cut(s) 56, 254, 377, 416, 1680
BceAI ACGGC 2 cut(s) 35, 287
BcgI CGANNNNNNTGC 2 cut(s) 1752, 1786
BciT130I CCWGG 7 cut(s) 289, 867, 1038, 1119, 1236, 1349, 1553
BcoDI GTCTC 3 cut(s) 126, 1070, 1662
BcuI ACTAGT 1 cut(s) 967
BfaI CTAG 8 cut(s) 393, 465, 527, 702, 818, 968, 1418, 1532
BfmI CTRYAG 2 cut(s) 912, 2085
BfrI CTTAAG 1 cut(s) 1340
BisI GCNGC 5 cut(s) 110, 300, 1911, 1932, 1943
BlsI GCNGC 5 cut(s) 111, 301, 1912, 1933, 1944
BmcAI AGTACT 1 cut(s) 731
Bme1390I CCNGG 7 cut(s) 289, 867, 1038, 1119, 1236, 1349, 1553
Bme18I GGWCC 2 cut(s) 672, 1232
BmgBI CACGTC 1 cut(s) 1885
BmgT120I GGNCC 6 cut(s) 640, 672, 862, 863, 1232, 1345
BmiI GGNNCC 4 cut(s) 453, 674, 742, 864
BmrFI CCNGG 7 cut(s) 289, 867, 1038, 1119, 1236, 1349, 1553
BmsI GCATC 7 cut(s) 70, 541, 700, 811, 1551, 1892, 2168
BmtI GCTAGC 1 cut(s) 705
BpiI GAAGAC 1 cut(s) 1850
BplI GAGNNNNNCTC 4 cut(s) 1659, 1691, 1795, 1827
BpmI CTGGAG 2 cut(s) 875, 2037
Bpu10I CCTNAGC 2 cut(s) 327, 636
BpuEI CTTGAG 1 cut(s) 638
BsaBI GATNNNNATC 2 cut(s) 66, 456
BsaHI GRCGYC 1 cut(s) 1480
BsaI GGTCTC 1 cut(s) 1662
BsaJI CCNNGG 9 cut(s) 287, 664, 760, 865, 1118, 1235, 1347, 1348, 2121
BsaXI ACNNNNNCTCC 2 cut(s) 1201, 1231
Bsc4I CCNNNNNNNGG 1 cut(s) 1154
Bse1I ACTGG 4 cut(s) 156, 205, 1472, 2054
Bse21I CCTNAGG 2 cut(s) 1802, 1947
Bse3DI GCAATG 1 cut(s) 1584
Bse8I GATNNNNATC 2 cut(s) 66, 456
BseBI CCWGG 7 cut(s) 289, 867, 1038, 1119, 1236, 1349, 1553
BseDI CCNNGG 9 cut(s) 287, 664, 760, 865, 1118, 1235, 1347, 1348, 2121
BseGI GGATG 4 cut(s) 265, 715, 756, 2131
BseJI GATNNNNATC 2 cut(s) 66, 456
BseLI CCNNNNNNNGG 1 cut(s) 1154
BseMI GCAATG 1 cut(s) 1584
BseMII CTCAG 8 cut(s) 242, 318, 425, 650, 1065, 1599, 1793, 1938
BseNI ACTGG 4 cut(s) 156, 205, 1472, 2054
BseRI GAGGAG 2 cut(s) 173, 872
BseSI GKGCMC 1 cut(s) 866
BseXI GCAGC 5 cut(s) 121, 286, 1922, 1943, 1954
BseYI CCCAGC 2 cut(s) 245, 1435
BsgI GTGCAG 1 cut(s) 1239
BshFI GGCC 3 cut(s) 642, 864, 1346
BshNI GGYRCC 1 cut(s) 740
BsiHKAI GWGCWC 1 cut(s) 637
BslFI GGGAC 1 cut(s) 1593
BslI CCNNNNNNNGG 1 cut(s) 1154
BsmAI GTCTC 3 cut(s) 126, 1070, 1662
BsmFI GGGAC 1 cut(s) 1593
BsmI GAATGC 1 cut(s) 2026
BsnI GGCC 3 cut(s) 642, 864, 1346
Bso31I GGTCTC 1 cut(s) 1662
Bsp120I GGGCCC 1 cut(s) 862
Bsp1286I GDGCHC 2 cut(s) 637, 866
Bsp1407I TGTACA 1 cut(s) 237
Bsp143I GATC 8 cut(s) 405, 451, 1114, 1264, 1302, 1724, 1952, 2184
BspACI CCGC 5 cut(s) 207, 255, 1249, 1309, 1990
BspANI GGCC 3 cut(s) 642, 864, 1346
BspCNI CTCAG 8 cut(s) 241, 319, 426, 649, 1066, 1598, 1794, 1939
BspHI TCATGA 1 cut(s) 496
BspLI GGNNCC 4 cut(s) 453, 674, 742, 864
BspOI GCTAGC 1 cut(s) 705
BspPI GGATC 7 cut(s) 413, 446, 459, 1109, 1272, 1960, 2179
BspQI GCTCTTC 1 cut(s) 1206
BspT107I GGYRCC 1 cut(s) 740
BspTI CTTAAG 1 cut(s) 1340
BspTNI GGTCTC 1 cut(s) 1662
BsrDI GCAATG 1 cut(s) 1584
BsrGI TGTACA 1 cut(s) 237
BsrI ACTGG 4 cut(s) 156, 205, 1472, 2054
BssECI CCNNGG 9 cut(s) 287, 664, 760, 865, 1118, 1235, 1347, 1348, 2121
BssMI GATC 8 cut(s) 405, 451, 1114, 1264, 1302, 1724, 1952, 2184
BssNI GRCGYC 1 cut(s) 1480
BssSI CACGAG 1 cut(s) 1812
BssT1I CCWWGG 3 cut(s) 664, 760, 2121
Bst2BI CACGAG 1 cut(s) 1812
Bst2UI CCWGG 7 cut(s) 289, 867, 1038, 1119, 1236, 1349, 1553
Bst6I CTCTTC 7 cut(s) 129, 801, 999, 1206, 1551, 1620, 2077
BstACI GRCGYC 1 cut(s) 1480
BstAFI CTTAAG 1 cut(s) 1340
BstAUI TGTACA 1 cut(s) 237
BstC8I GCNNGC 6 cut(s) 74, 105, 703, 1218, 1492, 1809
BstF5I GGATG 4 cut(s) 265, 715, 756, 2131
BstHHI GCGC 1 cut(s) 109
BstKTI GATC 8 cut(s) 408, 454, 1117, 1267, 1305, 1727, 1955, 2187
BstMAI GTCTC 3 cut(s) 126, 1070, 1662
BstMBI GATC 8 cut(s) 405, 451, 1114, 1264, 1302, 1724, 1952, 2184
BstMWI GCNNNNNNNGC 4 cut(s) 109, 532, 830, 1222
BstNI CCWGG 7 cut(s) 289, 867, 1038, 1119, 1236, 1349, 1553
BstNSI RCATGY 2 cut(s) 1811, 2196
BstSCI CCNGG 7 cut(s) 287, 865, 1036, 1117, 1234, 1347, 1551
BstSFI CTRYAG 2 cut(s) 912, 2085
BstSLI GKGCMC 1 cut(s) 866
BstV1I GCAGC 5 cut(s) 121, 286, 1922, 1943, 1954
BstV2I GAAGAC 1 cut(s) 1850
BstX2I RGATCY 2 cut(s) 451, 1114
BstXI CCANNNNNNTGG 1 cut(s) 295
BstYI RGATCY 2 cut(s) 451, 1114
Bsu36I CCTNAGG 2 cut(s) 1802, 1947
BsuRI GGCC 3 cut(s) 642, 864, 1346
BtrI CACGTC 1 cut(s) 1885
BtsCI GGATG 4 cut(s) 265, 715, 756, 2131
BtsIMutI CAGTG 6 cut(s) 443, 513, 742, 1089, 1372, 2212
Cac8I GCNNGC 6 cut(s) 74, 105, 703, 1218, 1492, 1809
CciI TCATGA 1 cut(s) 496
CfoI GCGC 1 cut(s) 109
Cfr13I GGNCC 6 cut(s) 640, 672, 862, 863, 1232, 1345
CseI GACGC 2 cut(s) 1488, 1689
Csp6I GTAC 6 cut(s) 238, 412, 545, 730, 1105, 1985
CspCI CAANNNNNGTGG 1 cut(s) 2188
CviAII CATG 7 cut(s) 385, 415, 497, 694, 800, 1808, 2193
CviQI GTAC 6 cut(s) 238, 412, 545, 730, 1105, 1985
DpnI GATC 8 cut(s) 407, 453, 1116, 1266, 1304, 1726, 1954, 2186
DpnII GATC 8 cut(s) 405, 451, 1114, 1264, 1302, 1724, 1952, 2184
DraI TTTAAA 1 cut(s) 1938
Eam1104I CTCTTC 7 cut(s) 129, 801, 999, 1206, 1551, 1620, 2077
EarI CTCTTC 7 cut(s) 129, 801, 999, 1206, 1551, 1620, 2077
EciI GGCGGA 1 cut(s) 1238
Eco130I CCWWGG 3 cut(s) 664, 760, 2121
Eco24I GRGCYC 1 cut(s) 866
Eco31I GGTCTC 1 cut(s) 1662
Eco32I GATATC 1 cut(s) 1363
Eco47I GGWCC 2 cut(s) 672, 1232
Eco57I CTGAAG 3 cut(s) 718, 984, 1874
Eco81I CCTNAGG 2 cut(s) 1802, 1947
EcoO109I RGGNCCY 5 cut(s) 640, 672, 862, 863, 1345
EcoRI GAATTC 1 cut(s) 1541
EcoRII CCWGG 7 cut(s) 287, 865, 1036, 1117, 1234, 1347, 1551
EcoRV GATATC 1 cut(s) 1363
EcoT14I CCWWGG 3 cut(s) 664, 760, 2121
EcoT38I GRGCYC 1 cut(s) 866
ErhI CCWWGG 3 cut(s) 664, 760, 2121
FaeI CATG 7 cut(s) 388, 418, 500, 697, 803, 1811, 2196
FalI AAGNNNNNCTT 4 cut(s) 921, 953, 1634, 1666
FaqI GGGAC 1 cut(s) 1593
FatI CATG 7 cut(s) 384, 414, 496, 693, 799, 1807, 2192
FauI CCCGC 1 cut(s) 248
Fnu4HI GCNGC 5 cut(s) 110, 300, 1911, 1932, 1943
FokI GGATG 4 cut(s) 272, 722, 743, 2138
FriOI GRGCYC 1 cut(s) 866
Fsp4HI GCNGC 5 cut(s) 110, 300, 1911, 1932, 1943
FspBI CTAG 8 cut(s) 393, 465, 527, 702, 818, 968, 1418, 1532
FspI TGCGCA 1 cut(s) 108
GlaI GCGC 1 cut(s) 108
GluI GCNGC 5 cut(s) 110, 300, 1911, 1932, 1943
GsaI CCCAGC 2 cut(s) 249, 1439
GsuI CTGGAG 2 cut(s) 875, 2037
HaeIII GGCC 3 cut(s) 642, 864, 1346
HgaI GACGC 2 cut(s) 1488, 1689
HhaI GCGC 1 cut(s) 109
Hin1I GRCGYC 1 cut(s) 1480
Hin1II CATG 7 cut(s) 388, 418, 500, 697, 803, 1811, 2196
Hin6I GCGC 1 cut(s) 107
HinP1I GCGC 1 cut(s) 107
HindIII AAGCTT 2 cut(s) 74, 1755
HinfI GANTC 7 cut(s) 847, 908, 1163, 1286, 1592, 1628, 2034
HphI GGTGA 4 cut(s) 206, 362, 881, 1889
Hpy166II GTNNAC 3 cut(s) 511, 754, 2048
Hpy188I TCNGA 7 cut(s) 61, 168, 374, 727, 846, 1003, 1763
Hpy8I GTNNAC 3 cut(s) 511, 754, 2048
Hpy99I CGWCG 2 cut(s) 1839, 1886
HpyAV CCTTC 4 cut(s) 663, 1008, 1223, 1505
HpyCH4IV ACGT 3 cut(s) 1107, 1135, 1884
HpyF10VI GCNNNNNNNGC 4 cut(s) 109, 532, 830, 1222
HpySE526I ACGT 3 cut(s) 1107, 1135, 1884
Hsp92I GRCGYC 1 cut(s) 1480
Hsp92II CATG 7 cut(s) 388, 418, 500, 697, 803, 1811, 2196
HspAI GCGC 1 cut(s) 107
Kzo9I GATC 8 cut(s) 405, 451, 1114, 1264, 1302, 1724, 1952, 2184
LguI GCTCTTC 1 cut(s) 1206
LmnI GCTCC 1 cut(s) 1802
Lsp1109I GCAGC 5 cut(s) 121, 286, 1922, 1943, 1954
LweI GCATC 7 cut(s) 70, 541, 700, 811, 1551, 1892, 2168
MaeI CTAG 8 cut(s) 393, 465, 527, 702, 818, 968, 1418, 1532
MaeII ACGT 3 cut(s) 1107, 1135, 1884
MaeIII GTNAC 8 cut(s) 304, 362, 945, 1084, 1136, 1613, 1814, 1877
MalI GATC 8 cut(s) 407, 453, 1116, 1266, 1304, 1726, 1954, 2186
MboI GATC 8 cut(s) 405, 451, 1114, 1264, 1302, 1724, 1952, 2184
MfeI CAATTG 3 cut(s) 617, 1424, 1546
MflI RGATCY 2 cut(s) 451, 1114
MhlI GDGCHC 2 cut(s) 637, 866
MlyI GAGTC 1 cut(s) 1637
MmeI TCCRAC 4 cut(s) 429, 1140, 1456, 2011
MroXI GAANNNNTTC 1 cut(s) 1244
MseI TTAA 8 cut(s) 686, 939, 1341, 1445, 1686, 1937, 1979, 2212
MslI CAYNNNNRTG 3 cut(s) 516, 518, 1812
MspCI CTTAAG 1 cut(s) 1340
MspR9I CCNGG 7 cut(s) 289, 867, 1038, 1119, 1236, 1349, 1553
MunI CAATTG 3 cut(s) 617, 1424, 1546
Mva1269I GAATGC 1 cut(s) 2026
MvaI CCWGG 7 cut(s) 289, 867, 1038, 1119, 1236, 1349, 1553
MwoI GCNNNNNNNGC 4 cut(s) 109, 532, 830, 1222
NdeII GATC 8 cut(s) 405, 451, 1114, 1264, 1302, 1724, 1952, 2184
NheI GCTAGC 1 cut(s) 701
NlaIII CATG 7 cut(s) 388, 418, 500, 697, 803, 1811, 2196
NlaIV GGNNCC 4 cut(s) 453, 674, 742, 864
NmuCI GTSAC 5 cut(s) 304, 1084, 1613, 1814, 1877
NsbI TGCGCA 1 cut(s) 108
NspI RCATGY 2 cut(s) 1811, 2196
OliI CACNNNNGTG 1 cut(s) 518
PaeI GCATGC 1 cut(s) 1811
PagI TCATGA 1 cut(s) 496
PasI CCCWGGG 1 cut(s) 1348
PciSI GCTCTTC 1 cut(s) 1206
PctI GAATGC 1 cut(s) 2026
PdmI GAANNNNTTC 1 cut(s) 1244
PfeI GAWTC 6 cut(s) 847, 908, 1163, 1286, 1592, 2034
PfoI TCCNGGA 1 cut(s) 1036
PkrI GCNGC 5 cut(s) 111, 301, 1912, 1933, 1944
PleI GAGTC 1 cut(s) 1636
PpsI GAGTC 1 cut(s) 1636
PpuMI RGGWCCY 1 cut(s) 672
Psp5II RGGWCCY 1 cut(s) 672
Psp6I CCWGG 7 cut(s) 287, 865, 1036, 1117, 1234, 1347, 1551
PspFI CCCAGC 2 cut(s) 245, 1435
PspGI CCWGG 7 cut(s) 287, 865, 1036, 1117, 1234, 1347, 1551
PspN4I GGNNCC 4 cut(s) 453, 674, 742, 864
PspOMI GGGCCC 1 cut(s) 862
PspPI GGNCC 6 cut(s) 640, 672, 862, 863, 1232, 1345
PspPPI RGGWCCY 1 cut(s) 672
PsuI RGATCY 2 cut(s) 451, 1114
RsaI GTAC 6 cut(s) 239, 413, 546, 731, 1106, 1986
RsaNI GTAC 6 cut(s) 238, 412, 545, 730, 1105, 1985
RseI CAYNNNNRTG 3 cut(s) 516, 518, 1812
SapI GCTCTTC 1 cut(s) 1206
SaqAI TTAA 8 cut(s) 686, 939, 1341, 1445, 1686, 1937, 1979, 2212
SatI GCNGC 5 cut(s) 110, 300, 1911, 1932, 1943
Sau3AI GATC 8 cut(s) 405, 451, 1114, 1264, 1302, 1724, 1952, 2184
Sau96I GGNCC 6 cut(s) 640, 672, 862, 863, 1232, 1345
ScaI AGTACT 1 cut(s) 731
SchI GAGTC 1 cut(s) 1637
ScrFI CCNGG 7 cut(s) 289, 867, 1038, 1119, 1236, 1349, 1553
SduI GDGCHC 2 cut(s) 637, 866
SfaNI GCATC 7 cut(s) 70, 541, 700, 811, 1551, 1892, 2168
SfcI CTRYAG 2 cut(s) 912, 2085
SinI GGWCC 2 cut(s) 672, 1232
SmiMI CAYNNNNRTG 3 cut(s) 516, 518, 1812
SmlI CTYRAG 3 cut(s) 6, 653, 1340
SmoI CTYRAG 3 cut(s) 6, 653, 1340
SpeI ACTAGT 1 cut(s) 967
SphI GCATGC 1 cut(s) 1811
SsiI CCGC 5 cut(s) 207, 255, 1249, 1309, 1990
SspI AATATT 2 cut(s) 1056, 1069
SspMI CTAG 8 cut(s) 393, 465, 527, 702, 818, 968, 1418, 1532
StyD4I CCNGG 7 cut(s) 287, 865, 1036, 1117, 1234, 1347, 1551
StyI CCWWGG 3 cut(s) 664, 760, 2121
TaiI ACGT 3 cut(s) 1110, 1138, 1887
TaqI TCGA 5 cut(s) 398, 906, 1631, 1834, 2176
TaqII GACCGA 1 cut(s) 2065
TatI WGTACW 4 cut(s) 237, 411, 729, 1984
TfiI GAWTC 6 cut(s) 847, 908, 1163, 1286, 1592, 2034
Tru1I TTAA 8 cut(s) 686, 939, 1341, 1445, 1686, 1937, 1979, 2212
Tru9I TTAA 8 cut(s) 686, 939, 1341, 1445, 1686, 1937, 1979, 2212
TscAI CASTG 6 cut(s) 450, 520, 742, 1089, 1372, 2212
TseFI GTSAC 5 cut(s) 304, 1084, 1613, 1814, 1877
TseI GCWGC 5 cut(s) 109, 299, 1910, 1931, 1942
Tsp45I GTSAC 5 cut(s) 304, 1084, 1613, 1814, 1877
TspDTI ATGAA 7 cut(s) 504, 788, 839, 1369, 1774, 2026, 2117
TspRI CASTG 6 cut(s) 450, 520, 742, 1089, 1372, 2212
Vha464I CTTAAG 1 cut(s) 1340
VpaK11BI GGWCC 2 cut(s) 672, 1232
XapI RAATTY 6 cut(s) 343, 717, 1277, 1541, 1780, 1830
XbaI TCTAGA 1 cut(s) 817
XceI RCATGY 2 cut(s) 1811, 2196
XcmI CCANNNNNNNNNTGG 1 cut(s) 1711
XmnI GAANNNNTTC 1 cut(s) 1244
XspI CTAG 8 cut(s) 393, 465, 527, 702, 818, 968, 1418, 1532
ZrmI AGTACT 1 cut(s) 731
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.