AT1G29820

CorA-like Mg2+ transporter protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0002432
Physical Location & Seq
Forward (+)
10437657 .. 10440786
3130 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G29820.1

Sequence Viewer

Length: 1623 bp
ATGGGTGAGAACGGGGAGAATCATTCAGTCTCTCAAGAGAGTAAATCCAAGAAGCTTGAGAGTAAAAATCATTCAGGTGTTCCCAAGAGCGATCTTTGGACTGATGGGATTATTTGTGCCTTTGAGTTTATTCGAGGTCCGAAAAAACATGTTGATTCAAAACAACTTGAGAAAGGTGCTTTGAAGCAAGAAGATGGACCAATCAGTCATAGTTTCCCTGGTCATAACCCGTTTGTTGATTCGTCTCCAGTTGATGATTTAAGGTCAAGGTCGGTATCTTCTTTGGATTTTAAAGAGGCTCATTTGCTTCCATCAGGGCATGTTGAGAGATATGAGGGAAGTCATTGGGTACCTATTGGTTGGGCTAGAATAACTGAACTAGTTCAAATGGTTCAAGTAAACGCTGAGTGGCCTAATCTAGAGTTGATTGATGATGAAGAAGATGTCCCTGTTACAGATTTAGCAGCTCCGTATTGGGAACGACCAGGTGGCCCTACATGGTGGTGTCACTTGTCTGCTGGAAACTCTTTTGTTGAGGGATGGCTTAGAAGTGCTACGTGGTTGCATCCTGCAATTAGTCTGGCATTGAGGGATGAAAGTAAGCTAATAAGTGAACGGATGAGACATCTTCTATATGAGGTTCCAGTGAGAGTAGCTGGTGGTTTATTGTTTGAACTTTTAGGACAATCAGTTGGTGATCCAGTAATCAGTGAGGATGATGTACCCGTTGTTTTCCGCTCTTGGCAAGCGAAGAACTTCTTAGTTTCCGTGATGCACATAAAAGGAAATGTAACGAACACCAATGTCCTTGGTATAACTGAAGTAGAGGAGCTGCTTTATGCAGGAGGTTATAATGTACCAAGAACGGTTCATGAGGTTATAGCACACTTGGCTTGCCGTCTTTCTCGATGGGATGATAGATTATTCCGTAAATCCATATTTGGTGCAGCCGATGAAATCGAATTGAAGTTTATGAACAGGAGAAACTATGAGGATTTGAATCTTTTCAGTATCATTCTCAACCAAGAGATCAGAAAATTATCAAGACAGGTCATCCGAGTGAAGTGGTCACTACACGCGAGAGAGGAGATTATCTTTGAGCTTCTCCAGCATTTGAGGGGAAACATAGCTCGACATCTCTTAGATGGTTTGAGGAAGAACACAAGGGAAATGTTGGAAGAACAAGAAGCAGTTCGTGGACGTCTCTTCACAATTCAAGATGTCATGCAAAGCAGTGTCCGCGCTTGGTTACAGGACAAAAGCTTGAGAGTAAGCCACAACTTGGCCGTCTTCGGAGGATGTGGTCTTGTACTTACCATCATCGTAGGGCTGTTTGGGATCAATGTGGATGGGATCCCGGGGGCGCAGAACACGCCTTATGCGTTTGGTCTATTCACTTTTCTGATGGTTCTCCTTGGGGCTATTCTGATTGTGGTTGGTTTGGTATACTTGGGGCTCAAAAAACCCATTACAGAAGAACAAGTAGAAGTTAGAAAGCTGGAGCTACAAGACGTGGTTAAGATATTTCAACACGAAGCGGAGACTCATGCCCAACTCCGTAGAAACAACCTTTCTCCTACTGCTGGAGATGTCTTTGATGCTGATTATATTCTCATCCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CorA

Protein Analysis

540

Amino Acids

61.05

Weight (kDa)

5.88

Isoelectric Point (pI)

44.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CorA PF01544 342 - 478 7.3e-12 CorA-like Mg2+ transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 852
AasI GACNNNNNNGTC 1 cut(s) 204
AatII GACGTC 1 cut(s) 1204
Acc65I GGTACC 1 cut(s) 349
AccB1I GGYRCC 1 cut(s) 349
AccB7I CCANNNNNTGG 1 cut(s) 1282
AccBSI CCGCTC 1 cut(s) 738
AccI GTMKAC 1 cut(s) 1446
AccII CGCG 2 cut(s) 1079, 1242
AciI CCGC 3 cut(s) 736, 1240, 1538
AclWI GGATC 4 cut(s) 692, 1346, 1348, 1361
AcoI YGGCCR 1 cut(s) 1284
AcuI CTGAAG 1 cut(s) 840
AcyI GRCGYC 1 cut(s) 1201
AfaI GTAC 4 cut(s) 351, 723, 858, 1311
AfiI CCNNNNNNNGG 2 cut(s) 1282, 1583
AflIII ACRYGT 1 cut(s) 148
AgsI TTSAA 9 cut(s) 159, 184, 386, 395, 674, 967, 1000, 1217, 1529
AhlI ACTAGT 1 cut(s) 379
AjiI CACGTC 1 cut(s) 1513
AjnI CCWGG 2 cut(s) 217, 484
Alw26I GTCTC 5 cut(s) 34, 249, 616, 1208, 1535
AlwI GGATC 4 cut(s) 692, 1346, 1348, 1361
Ama87I CYCGRG 1 cut(s) 1357
AoxI GGCC 3 cut(s) 410, 490, 1284
ApeKI GCWGC 3 cut(s) 464, 832, 947
Asp700I GAANNNNTTC 4 cut(s) 381, 755, 1004, 1191
Asp718I GGTACC 1 cut(s) 349
AspLEI GCGC 2 cut(s) 1244, 1366
AspS9I GGNCC 3 cut(s) 137, 197, 491
AsuC2I CCSGG 2 cut(s) 1358, 1359
AsuHPI GGTGA 2 cut(s) 17, 707
AvaI CYCGRG 1 cut(s) 1357
AvaII GGWCC 2 cut(s) 137, 197
BamHI GGATCC 1 cut(s) 1353
BanI GGYRCC 1 cut(s) 349
BanII GRGCYC 1 cut(s) 1458
BbsI GAAGAC 1 cut(s) 1282
BbvI GCAGC 3 cut(s) 476, 819, 959
BccI CCATC 9 cut(s) 98, 188, 319, 534, 903, 1139, 1325, 1343, 1399
BceAI ACGGC 2 cut(s) 882, 1271
BciT130I CCWGG 2 cut(s) 219, 486
BcnI CCSGG 2 cut(s) 1358, 1359
BcoDI GTCTC 5 cut(s) 34, 249, 616, 1208, 1535
BcuI ACTAGT 1 cut(s) 379
BfaI CTAG 3 cut(s) 366, 380, 419
BisI GCNGC 3 cut(s) 465, 833, 948
BlsI GCNGC 3 cut(s) 466, 834, 949
Bme1390I CCNGG 4 cut(s) 219, 486, 1358, 1359
Bme18I GGWCC 2 cut(s) 137, 197
BmeT110I CYCGRG 1 cut(s) 1357
BmgBI CACGTC 1 cut(s) 1513
BmgT120I GGNCC 3 cut(s) 137, 197, 491
BmiI GGNNCC 3 cut(s) 351, 642, 1355
BmrFI CCNGG 4 cut(s) 219, 486, 1358, 1359
BmsI GCATC 3 cut(s) 574, 762, 1588
BpiI GAAGAC 1 cut(s) 1282
BpmI CTGGAG 4 cut(s) 231, 1091, 1520, 1605
BpuEI CTTGAG 4 cut(s) 18, 77, 188, 1285
BpuMI CCSGG 2 cut(s) 1358, 1359
BsaAI YACGTR 1 cut(s) 558
BsaBI GATNNNNATC 1 cut(s) 999
BsaHI GRCGYC 1 cut(s) 1201
BsaJI CCNNGG 5 cut(s) 217, 808, 1357, 1358, 1414
Bsc4I CCNNNNNNNGG 2 cut(s) 1282, 1583
Bse1I ACTGG 4 cut(s) 248, 644, 701, 1618
Bse8I GATNNNNATC 1 cut(s) 999
BseBI CCWGG 2 cut(s) 219, 486
BseDI CCNNGG 5 cut(s) 217, 808, 1357, 1358, 1414
BseJI GATNNNNATC 1 cut(s) 999
BseLI CCNNNNNNNGG 2 cut(s) 1282, 1583
BseMII CTCAG 1 cut(s) 396
BseNI ACTGG 4 cut(s) 248, 644, 701, 1618
BseRI GAGGAG 2 cut(s) 842, 1100
BseXI GCAGC 3 cut(s) 476, 819, 959
BsgI GTGCAG 1 cut(s) 966
Bsh1236I CGCG 2 cut(s) 1079, 1242
BshFI GGCC 3 cut(s) 412, 492, 1286
BshNI GGYRCC 1 cut(s) 349
BsiHKCI CYCGRG 1 cut(s) 1357
BsiSI CCGG 1 cut(s) 1358
BslFI GGGAC 1 cut(s) 431
BslI CCNNNNNNNGG 2 cut(s) 1282, 1583
BsmAI GTCTC 5 cut(s) 34, 249, 616, 1208, 1535
BsmBI CGTCTC 2 cut(s) 249, 1208
BsmFI GGGAC 1 cut(s) 431
BsnI GGCC 3 cut(s) 412, 492, 1286
BsoBI CYCGRG 1 cut(s) 1357
Bsp1286I GDGCHC 1 cut(s) 1458
Bsp143I GATC 5 cut(s) 91, 697, 1029, 1338, 1353
BspACI CCGC 3 cut(s) 736, 1240, 1538
BspANI GGCC 3 cut(s) 412, 492, 1286
BspCNI CTCAG 1 cut(s) 397
BspFNI CGCG 2 cut(s) 1079, 1242
BspHI TCATGA 1 cut(s) 871
BspLI GGNNCC 3 cut(s) 351, 642, 1355
BspPI GGATC 4 cut(s) 692, 1346, 1348, 1361
BspT107I GGYRCC 1 cut(s) 349
BsrBI CCGCTC 1 cut(s) 738
BsrI ACTGG 4 cut(s) 248, 644, 701, 1618
BssECI CCNNGG 5 cut(s) 217, 808, 1357, 1358, 1414
BssMI GATC 5 cut(s) 91, 697, 1029, 1338, 1353
BssNAI GTATAC 1 cut(s) 1447
BssNI GRCGYC 1 cut(s) 1201
BssT1I CCWWGG 2 cut(s) 808, 1414
Bst1107I GTATAC 1 cut(s) 1447
Bst2UI CCWGG 2 cut(s) 219, 486
Bst4CI ACNGT 1 cut(s) 868
Bst6I CTCTTC 1 cut(s) 1211
BstACI GRCGYC 1 cut(s) 1201
BstBAI YACGTR 1 cut(s) 558
BstC8I GCNNGC 2 cut(s) 747, 895
BstDEI CTNAG 4 cut(s) 405, 545, 760, 1141
BstFNI CGCG 2 cut(s) 1079, 1242
BstHHI GCGC 2 cut(s) 1244, 1366
BstKTI GATC 5 cut(s) 94, 700, 1032, 1341, 1356
BstMAI GTCTC 5 cut(s) 34, 249, 616, 1208, 1535
BstMBI GATC 5 cut(s) 91, 697, 1029, 1338, 1353
BstMWI GCNNNNNNNGC 4 cut(s) 890, 1108, 1239, 1372
BstNI CCWGG 2 cut(s) 219, 486
BstNSI RCATGY 2 cut(s) 152, 323
BstSCI CCNGG 4 cut(s) 217, 484, 1356, 1357
BstUI CGCG 2 cut(s) 1079, 1242
BstV1I GCAGC 3 cut(s) 476, 819, 959
BstV2I GAAGAC 1 cut(s) 1282
BstX2I RGATCY 1 cut(s) 1353
BstYI RGATCY 1 cut(s) 1353
BstZ17I GTATAC 1 cut(s) 1447
BsuRI GGCC 3 cut(s) 412, 492, 1286
BtrI CACGTC 1 cut(s) 1513
BtsI GCAGTG 1 cut(s) 1240
BtsIMutI CAGTG 3 cut(s) 651, 715, 1240
Cac8I GCNNGC 2 cut(s) 747, 895
CciI TCATGA 1 cut(s) 871
CfoI GCGC 2 cut(s) 1244, 1366
Cfr13I GGNCC 3 cut(s) 137, 197, 491
Cfr9I CCCGGG 1 cut(s) 1357
CsiI ACCWGGT 1 cut(s) 484
Csp6I GTAC 4 cut(s) 350, 722, 857, 1310
CviAII CATG 6 cut(s) 149, 320, 498, 872, 1225, 1547
CviQI GTAC 4 cut(s) 350, 722, 857, 1310
DdeI CTNAG 4 cut(s) 405, 545, 760, 1141
DpnI GATC 5 cut(s) 93, 699, 1031, 1340, 1355
DpnII GATC 5 cut(s) 91, 697, 1029, 1338, 1353
DraI TTTAAA 1 cut(s) 292
DrdI GACNNNNNNGTC 1 cut(s) 204
DseDI GACNNNNNNGTC 1 cut(s) 204
EaeI YGGCCR 1 cut(s) 1284
Eam1104I CTCTTC 1 cut(s) 1211
EarI CTCTTC 1 cut(s) 1211
Eco130I CCWWGG 2 cut(s) 808, 1414
Eco24I GRGCYC 1 cut(s) 1458
Eco47I GGWCC 2 cut(s) 137, 197
Eco57I CTGAAG 1 cut(s) 840
Eco88I CYCGRG 1 cut(s) 1357
EcoRII CCWGG 2 cut(s) 217, 484
EcoT14I CCWWGG 2 cut(s) 808, 1414
EcoT38I GRGCYC 1 cut(s) 1458
ErhI CCWWGG 2 cut(s) 808, 1414
Esp3I CGTCTC 2 cut(s) 249, 1208
FaeI CATG 6 cut(s) 152, 323, 501, 875, 1228, 1550
FalI AAGNNNNNCTT 2 cut(s) 743, 775
FaqI GGGAC 1 cut(s) 431
FatI CATG 6 cut(s) 148, 319, 497, 871, 1224, 1546
FblI GTMKAC 1 cut(s) 1446
Fnu4HI GCNGC 3 cut(s) 465, 833, 948
FriOI GRGCYC 1 cut(s) 1458
Fsp4HI GCNGC 3 cut(s) 465, 833, 948
FspBI CTAG 3 cut(s) 366, 380, 419
GlaI GCGC 2 cut(s) 1243, 1365
GluI GCNGC 3 cut(s) 465, 833, 948
GsuI CTGGAG 4 cut(s) 231, 1091, 1520, 1605
HaeIII GGCC 3 cut(s) 412, 492, 1286
HapII CCGG 1 cut(s) 1358
HhaI GCGC 2 cut(s) 1244, 1366
Hin1I GRCGYC 1 cut(s) 1201
Hin1II CATG 6 cut(s) 152, 323, 501, 875, 1228, 1550
Hin6I GCGC 2 cut(s) 1242, 1364
HinP1I GCGC 2 cut(s) 1242, 1364
HindIII AAGCTT 2 cut(s) 53, 1261
HinfI GANTC 5 cut(s) 19, 155, 239, 1000, 1543
HpaII CCGG 1 cut(s) 1358
HphI GGTGA 2 cut(s) 17, 707
Hpy166II GTNNAC 4 cut(s) 400, 614, 1199, 1447
Hpy188I TCNGA 6 cut(s) 141, 1034, 1058, 1295, 1404, 1428
Hpy188III TCNNGA 6 cut(s) 35, 419, 872, 906, 1044, 1217
Hpy8I GTNNAC 4 cut(s) 400, 614, 1199, 1447
HpyCH4III ACNGT 1 cut(s) 868
HpyCH4IV ACGT 3 cut(s) 557, 1201, 1512
HpyCH4V TGCA 6 cut(s) 565, 572, 775, 842, 947, 1228
HpyF10VI GCNNNNNNNGC 4 cut(s) 890, 1108, 1239, 1372
HpyF3I CTNAG 4 cut(s) 405, 545, 760, 1141
HpySE526I ACGT 3 cut(s) 557, 1201, 1512
Hsp92I GRCGYC 1 cut(s) 1201
Hsp92II CATG 6 cut(s) 152, 323, 501, 875, 1228, 1550
HspAI GCGC 2 cut(s) 1242, 1364
KpnI GGTACC 1 cut(s) 353
Kzo9I GATC 5 cut(s) 91, 697, 1029, 1338, 1353
LmnI GCTCC 3 cut(s) 472, 829, 1501
Lsp1109I GCAGC 3 cut(s) 476, 819, 959
LweI GCATC 3 cut(s) 574, 762, 1588
MabI ACCWGGT 1 cut(s) 484
MaeI CTAG 3 cut(s) 366, 380, 419
MaeII ACGT 3 cut(s) 557, 1201, 1512
MaeIII GTNAC 5 cut(s) 451, 506, 790, 1068, 1248
MalI GATC 5 cut(s) 93, 699, 1031, 1340, 1355
MbiI CCGCTC 1 cut(s) 738
MboI GATC 5 cut(s) 91, 697, 1029, 1338, 1353
MflI RGATCY 1 cut(s) 1353
MhlI GDGCHC 1 cut(s) 1458
MluCI AATT 4 cut(s) 573, 962, 1037, 1212
MlyI GAGTC 1 cut(s) 1537
MmeI TCCRAC 1 cut(s) 1155
MroXI GAANNNNTTC 4 cut(s) 381, 755, 1004, 1191
MseI TTAA 3 cut(s) 260, 291, 1518
MslI CAYNNNNRTG 3 cut(s) 75, 502, 1058
MspI CCGG 1 cut(s) 1358
MspR9I CCNGG 4 cut(s) 219, 486, 1358, 1359
MvaI CCWGG 2 cut(s) 219, 486
MvnI CGCG 2 cut(s) 1079, 1242
MwoI GCNNNNNNNGC 4 cut(s) 890, 1108, 1239, 1372
NciI CCSGG 2 cut(s) 1358, 1359
NdeII GATC 5 cut(s) 91, 697, 1029, 1338, 1353
NlaIII CATG 6 cut(s) 152, 323, 501, 875, 1228, 1550
NlaIV GGNNCC 3 cut(s) 351, 642, 1355
NmuCI GTSAC 2 cut(s) 506, 1068
NspI RCATGY 2 cut(s) 152, 323
PagI TCATGA 1 cut(s) 871
PciI ACATGT 1 cut(s) 148
PcsI WCGNNNNNNNCGW 1 cut(s) 1379
PdmI GAANNNNTTC 4 cut(s) 381, 755, 1004, 1191
PfeI GAWTC 4 cut(s) 19, 155, 239, 1000
PflMI CCANNNNNTGG 1 cut(s) 1282
PkrI GCNGC 3 cut(s) 466, 834, 949
PleI GAGTC 1 cut(s) 1537
PpsI GAGTC 1 cut(s) 1537
Ppu21I YACGTR 1 cut(s) 558
PscI ACATGT 1 cut(s) 148
PsiI TTATAA 1 cut(s) 852
Psp6I CCWGG 2 cut(s) 217, 484
PspGI CCWGG 2 cut(s) 217, 484
PspN4I GGNNCC 3 cut(s) 351, 642, 1355
PspPI GGNCC 3 cut(s) 137, 197, 491
PsuI RGATCY 1 cut(s) 1353
RsaI GTAC 4 cut(s) 351, 723, 858, 1311
RsaNI GTAC 4 cut(s) 350, 722, 857, 1310
RseI CAYNNNNRTG 3 cut(s) 75, 502, 1058
SaqAI TTAA 3 cut(s) 260, 291, 1518
SatI GCNGC 3 cut(s) 465, 833, 948
Sau3AI GATC 5 cut(s) 91, 697, 1029, 1338, 1353
Sau96I GGNCC 3 cut(s) 137, 197, 491
SchI GAGTC 1 cut(s) 1537
ScrFI CCNGG 4 cut(s) 219, 486, 1358, 1359
SduI GDGCHC 1 cut(s) 1458
SexAI ACCWGGT 1 cut(s) 484
SfaNI GCATC 3 cut(s) 574, 762, 1588
SinI GGWCC 2 cut(s) 137, 197
SmaI CCCGGG 1 cut(s) 1359
SmiMI CAYNNNNRTG 3 cut(s) 75, 502, 1058
SmlI CTYRAG 4 cut(s) 33, 56, 167, 1264
SmoI CTYRAG 4 cut(s) 33, 56, 167, 1264
SpeI ACTAGT 1 cut(s) 379
Sse9I AATT 4 cut(s) 573, 962, 1037, 1212
SsiI CCGC 3 cut(s) 736, 1240, 1538
SspMI CTAG 3 cut(s) 366, 380, 419
StyD4I CCNGG 4 cut(s) 217, 484, 1356, 1357
StyI CCWWGG 2 cut(s) 808, 1414
TaaI ACNGT 1 cut(s) 868
TaiI ACGT 3 cut(s) 560, 1204, 1515
TaqI TCGA 4 cut(s) 133, 907, 960, 1132
TasI AATT 4 cut(s) 573, 962, 1037, 1212
TatI WGTACW 1 cut(s) 1309
TfiI GAWTC 4 cut(s) 19, 155, 239, 1000
Tru1I TTAA 3 cut(s) 260, 291, 1518
Tru9I TTAA 3 cut(s) 260, 291, 1518
TscAI CASTG 3 cut(s) 651, 715, 1240
TseFI GTSAC 2 cut(s) 506, 1068
TseI GCWGC 3 cut(s) 464, 832, 947
Tsp45I GTSAC 2 cut(s) 506, 1068
TspDTI ATGAA 5 cut(s) 450, 609, 860, 969, 989
TspGWI ACGGA 5 cut(s) 459, 631, 757, 917, 1547
TspMI CCCGGG 1 cut(s) 1357
TspRI CASTG 3 cut(s) 651, 715, 1240
Van91I CCANNNNNTGG 1 cut(s) 1282
VpaK11BI GGWCC 2 cut(s) 137, 197
XbaI TCTAGA 1 cut(s) 418
XceI RCATGY 2 cut(s) 152, 323
XmaI CCCGGG 1 cut(s) 1357
XmiI GTMKAC 1 cut(s) 1446
XmnI GAANNNNTTC 4 cut(s) 381, 755, 1004, 1191
XspI CTAG 3 cut(s) 366, 380, 419
ZraI GACGTC 1 cut(s) 1202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.