AT1G29830

CorA-like Mg2+ transporter protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0002432
Physical Location & Seq
Forward (+)
10441053 .. 10445657
4605 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G29830.3

Sequence Viewer

Length: 1602 bp
ATGGGTGAAAATGGGGAGAATCATTCAGTCTCTCAAGAGAGTAAAAATCATTCAGGTGTTCCGAAGAGTGATCTTTGGACTGATGGGATTATTTGTGCCTTTGAGTTTATTCGAGGCCCAAAAAAACATGTTGATTCAAAGCAACTTTATAAAGGTTACTTGAAGCAAGAAGATGGACCGATCAGACATAGTTTCCCTGGTCATAACCCGTTTATTGATTCGCCTGCAGTCGATTATTTAAGGTCAAGGTCTGTATCTTCTTTGGATTTTAAAGAGGCTCATGTCCTTCCATCAGGACATGTTGAGAGATCTGAGGGAAGTCATTGGGTACCTATTGGTTGGACTAGAATAACTAAACTAGTTCAACAGGTTCAAGTAAACGCGGAGTGGCCTAATCTAAAGTTGATTGATGATGAAGAAGATGTTCCTGTTACAGATTTAGCAGCTCCGTATTGGGAACGACCAGGTGGCCCTACATGGTGGTGTCACTTGACTGCTGGAAACTCTTTTGTTGAGGGATGGCTCAGAAGTGCTACGTGGTTGCATCCTGCAATTAGTCTTGCATTGAGGGATGAAAGTAAGCTAATAAGTGAACGGATGAGACATCTTCTATATGAGGTTCCGGTGAGGGTTGATGGGGGTTTATTGTTTGAACTCTTAGGACAATCAATGGGTGATCCAGTAATCGGTGAGGATGATGTACCCGTTGTTTTCCGCTCTTGGCAAGCAAAAAACTTTTTGGTATCTGTGATGCACATAAAAGGAAATGTATCAAAGAGCAATGTTCTCGGTATCACTGAAGTAGAGGAGTTGCTTTATGCAGGGAGCTATAATGTACCAAGAACAATTCATGAAGTCATAGCACACTTGGCTTGCCGTCTTTCTCGATGGGATGATAGATTATTTCGTAAATCCATATTTGGTGCTGCCGATGAAATCGAATTGAAGTTTATGAACAGGAGAAACCATGAGGATTTGAATCTTTTTAGTATCATTCTCAACCAAGAGATCAGAAAATTAGCAAGACAGACCATCCGAGTGAAGTGGTCACTACACGCGAGAGAGGAGATTATCTTGGAGCTTCTTCAGCATTTGAGGGGAAACATACCCCGACATTTGTTAGAGGGTTTGAGGAATAACACAAGGGAAATGTTGGAGGAACAAGAAGCGGTGCGTGGACGTCTCTTCACAATTCAGGACAACATTCAAAGCAATATCCGCTCTTGGTTACAGGATCAAAGCCTTAATGGTAGCCATAACTTGGCTATCTTTGGAGGATGTGGCCTTGTGCTAACCATAATCTTAGGACTGTTCAGTGTCAACCTGGATGGTGTTCCGGGTGTGAAGCACACGCCGTATGCATTTGTCTTGTTCAGTGTATTCTTGGTTCTCATTGGAATTGTTCTGATTGCGTTTGGTCTGAGATACCTAGGGCCAAAGAAGCCCATCACAGAAGAACATGTAGAAGCTAGAAAGCTGGAGCTACAAAACGTGGTTAAGATATTTCAACACGAAGCAGAGACTCATGCCCAACTCCGGAGAAACAACCTCTCTCCTACTGCTGGAGATGTGTTTGATGCTGATTATTTTCTCATCCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CorA

Protein Analysis

533

Amino Acids

60.63

Weight (kDa)

6.3

Isoelectric Point (pI)

50.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CorA PF01544 371 - 506 4.3e-08 CorA-like Mg2+ transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 150
AatII GACGTC 1 cut(s) 1183
Acc65I GGTACC 1 cut(s) 328
AccB1I GGYRCC 1 cut(s) 328
AccB7I CCANNNNNTGG 1 cut(s) 1261
AccBSI CCGCTC 2 cut(s) 717, 1221
AccII CGCG 2 cut(s) 383, 1058
AccIII TCCGGA 1 cut(s) 1536
AciI CCGC 4 cut(s) 383, 715, 1169, 1219
AclWI GGATC 2 cut(s) 671, 1242
AcuI CTGAAG 2 cut(s) 819, 1070
AcyI GRCGYC 1 cut(s) 1180
AfaI GTAC 3 cut(s) 330, 702, 837
AfiI CCNNNNNNNGG 4 cut(s) 686, 1261, 1536, 1562
AflIII ACRYGT 3 cut(s) 127, 298, 1459
AgsI TTSAA 9 cut(s) 138, 163, 365, 374, 653, 946, 979, 1208, 1508
AhlI ACTAGT 1 cut(s) 358
AjnI CCWGG 3 cut(s) 196, 463, 1323
AluBI AGCT 7 cut(s) 446, 583, 828, 1081, 1469, 1477, 1483
AluI AGCT 7 cut(s) 446, 583, 828, 1081, 1469, 1477, 1483
Alw26I GTCTC 4 cut(s) 34, 595, 1187, 1514
AlwI GGATC 2 cut(s) 671, 1242
Aor13HI TCCGGA 1 cut(s) 1536
AoxI GGCC 5 cut(s) 115, 389, 469, 1282, 1433
ApeKI GCWGC 2 cut(s) 443, 926
Asp700I GAANNNNTTC 1 cut(s) 423
Asp718I GGTACC 1 cut(s) 328
AspA2I CCTAGG 1 cut(s) 1429
AspS9I GGNCC 4 cut(s) 116, 176, 470, 1433
AsuC2I CCSGG 1 cut(s) 1338
AsuHPI GGTGA 4 cut(s) 17, 637, 686, 701
AvaII GGWCC 1 cut(s) 176
AvrII CCTAGG 1 cut(s) 1429
BanI GGYRCC 1 cut(s) 328
BbvI GCAGC 2 cut(s) 455, 913
BccI CCATC 9 cut(s) 77, 167, 298, 513, 629, 882, 1040, 1322, 1454
BceAI ACGGC 2 cut(s) 861, 1339
BcgI CGANNNNNNTGC 2 cut(s) 769, 803
BciT130I CCWGG 3 cut(s) 198, 465, 1325
BcnI CCSGG 1 cut(s) 1338
BcoDI GTCTC 4 cut(s) 34, 595, 1187, 1514
BcuI ACTAGT 1 cut(s) 358
BfaI CTAG 4 cut(s) 345, 359, 1430, 1470
BfmI CTRYAG 1 cut(s) 225
BglII AGATCT 1 cut(s) 308
BisI GCNGC 2 cut(s) 444, 927
BlnI CCTAGG 1 cut(s) 1429
BlsI GCNGC 2 cut(s) 445, 928
Bme1390I CCNGG 4 cut(s) 198, 465, 1325, 1338
Bme18I GGWCC 1 cut(s) 176
BmgT120I GGNCC 4 cut(s) 116, 176, 470, 1433
BmiI GGNNCC 2 cut(s) 330, 621
BmrFI CCNGG 4 cut(s) 198, 465, 1325, 1338
BmsI GCATC 3 cut(s) 553, 741, 1567
BpmI CTGGAG 2 cut(s) 1499, 1584
BpuEI CTTGAG 1 cut(s) 18
BpuMI CCSGG 1 cut(s) 1338
BsaAI YACGTR 1 cut(s) 537
BsaBI GATNNNNATC 1 cut(s) 978
BsaHI GRCGYC 1 cut(s) 1180
BsaJI CCNNGG 2 cut(s) 196, 1429
BsaWI WCCGGW 2 cut(s) 622, 1536
Bsc4I CCNNNNNNNGG 4 cut(s) 686, 1261, 1536, 1562
Bse1I ACTGG 2 cut(s) 680, 1597
Bse3DI GCAATG 1 cut(s) 787
Bse8I GATNNNNATC 1 cut(s) 978
BseAI TCCGGA 1 cut(s) 1536
BseBI CCWGG 3 cut(s) 198, 465, 1325
BseDI CCNNGG 2 cut(s) 196, 1429
BseJI GATNNNNATC 1 cut(s) 978
BseLI CCNNNNNNNGG 4 cut(s) 686, 1261, 1536, 1562
BseMI GCAATG 1 cut(s) 787
BseMII CTCAG 3 cut(s) 303, 538, 1412
BseNI ACTGG 2 cut(s) 680, 1597
BseRI GAGGAG 2 cut(s) 821, 1079
BseXI GCAGC 2 cut(s) 455, 913
Bsh1236I CGCG 2 cut(s) 383, 1058
BshFI GGCC 5 cut(s) 117, 391, 471, 1284, 1435
BshNI GGYRCC 1 cut(s) 328
BsiSI CCGG 3 cut(s) 623, 1337, 1537
BslI CCNNNNNNNGG 4 cut(s) 686, 1261, 1536, 1562
BsmAI GTCTC 4 cut(s) 34, 595, 1187, 1514
BsmBI CGTCTC 1 cut(s) 1187
BsnI GGCC 5 cut(s) 117, 391, 471, 1284, 1435
Bsp13I TCCGGA 1 cut(s) 1536
Bsp143I GATC 6 cut(s) 70, 180, 308, 676, 1008, 1234
BspACI CCGC 4 cut(s) 383, 715, 1169, 1219
BspANI GGCC 5 cut(s) 117, 391, 471, 1284, 1435
BspCNI CTCAG 3 cut(s) 304, 537, 1413
BspEI TCCGGA 1 cut(s) 1536
BspFNI CGCG 2 cut(s) 383, 1058
BspHI TCATGA 1 cut(s) 850
BspLI GGNNCC 2 cut(s) 330, 621
BspMAI CTGCAG 1 cut(s) 229
BspPI GGATC 2 cut(s) 671, 1242
BspT107I GGYRCC 1 cut(s) 328
BsrBI CCGCTC 2 cut(s) 717, 1221
BsrDI GCAATG 1 cut(s) 787
BsrI ACTGG 2 cut(s) 680, 1597
BssECI CCNNGG 2 cut(s) 196, 1429
BssMI GATC 6 cut(s) 70, 180, 308, 676, 1008, 1234
BssNI GRCGYC 1 cut(s) 1180
BssT1I CCWWGG 1 cut(s) 1429
Bst2UI CCWGG 3 cut(s) 198, 465, 1325
Bst4CI ACNGT 1 cut(s) 1311
Bst6I CTCTTC 2 cut(s) 59, 1190
BstACI GRCGYC 1 cut(s) 1180
BstBAI YACGTR 1 cut(s) 537
BstC8I GCNNGC 3 cut(s) 225, 726, 874
BstDEI CTNAG 5 cut(s) 312, 524, 658, 1303, 1421
BstFNI CGCG 2 cut(s) 383, 1058
BstKTI GATC 6 cut(s) 73, 183, 311, 679, 1011, 1237
BstMAI GTCTC 4 cut(s) 34, 595, 1187, 1514
BstMBI GATC 6 cut(s) 70, 180, 308, 676, 1008, 1234
BstMWI GCNNNNNNNGC 4 cut(s) 869, 1087, 1218, 1441
BstNI CCWGG 3 cut(s) 198, 465, 1325
BstNSI RCATGY 3 cut(s) 131, 302, 1463
BstSCI CCNGG 4 cut(s) 196, 463, 1323, 1336
BstSFI CTRYAG 1 cut(s) 225
BstUI CGCG 2 cut(s) 383, 1058
BstV1I GCAGC 2 cut(s) 455, 913
BstX2I RGATCY 1 cut(s) 308
BstYI RGATCY 1 cut(s) 308
BsuRI GGCC 5 cut(s) 117, 391, 471, 1284, 1435
BtsIMutI CAGTG 3 cut(s) 795, 1321, 1381
Cac8I GCNNGC 3 cut(s) 225, 726, 874
CciI TCATGA 1 cut(s) 850
Cfr13I GGNCC 4 cut(s) 116, 176, 470, 1433
CsiI ACCWGGT 1 cut(s) 463
Csp6I GTAC 3 cut(s) 329, 701, 836
CviAII CATG 8 cut(s) 128, 281, 299, 477, 851, 968, 1460, 1526
CviQI GTAC 3 cut(s) 329, 701, 836
DdeI CTNAG 5 cut(s) 312, 524, 658, 1303, 1421
DpnI GATC 6 cut(s) 72, 182, 310, 678, 1010, 1236
DpnII GATC 6 cut(s) 70, 180, 308, 676, 1008, 1234
DraI TTTAAA 1 cut(s) 271
Eam1104I CTCTTC 2 cut(s) 59, 1190
EarI CTCTTC 2 cut(s) 59, 1190
Eco130I CCWWGG 1 cut(s) 1429
Eco47I GGWCC 1 cut(s) 176
Eco57I CTGAAG 2 cut(s) 819, 1070
EcoRII CCWGG 3 cut(s) 196, 463, 1323
EcoT14I CCWWGG 1 cut(s) 1429
EcoT22I ATGCAT 1 cut(s) 1363
ErhI CCWWGG 1 cut(s) 1429
Esp3I CGTCTC 1 cut(s) 1187
FaeI CATG 8 cut(s) 131, 284, 302, 480, 854, 971, 1463, 1529
FatI CATG 8 cut(s) 127, 280, 298, 476, 850, 967, 1459, 1525
Fnu4HI GCNGC 2 cut(s) 444, 927
Fsp4HI GCNGC 2 cut(s) 444, 927
FspBI CTAG 4 cut(s) 345, 359, 1430, 1470
GluI GCNGC 2 cut(s) 444, 927
GsuI CTGGAG 2 cut(s) 1499, 1584
HaeIII GGCC 5 cut(s) 117, 391, 471, 1284, 1435
HapII CCGG 3 cut(s) 623, 1337, 1537
Hin1I GRCGYC 1 cut(s) 1180
Hin1II CATG 8 cut(s) 131, 284, 302, 480, 854, 971, 1463, 1529
HincII GTYRAC 1 cut(s) 1321
HindII GTYRAC 1 cut(s) 1321
HinfI GANTC 5 cut(s) 19, 134, 218, 979, 1522
HpaII CCGG 3 cut(s) 623, 1337, 1537
HphI GGTGA 4 cut(s) 17, 637, 686, 701
Hpy166II GTNNAC 4 cut(s) 379, 593, 1178, 1321
Hpy188I TCNGA 8 cut(s) 63, 185, 313, 527, 1013, 1037, 1407, 1422
Hpy188III TCNNGA 6 cut(s) 35, 294, 851, 885, 1196, 1537
Hpy8I GTNNAC 4 cut(s) 379, 593, 1178, 1321
HpyAV CCTTC 1 cut(s) 296
HpyCH4III ACNGT 1 cut(s) 1311
HpyCH4IV ACGT 3 cut(s) 536, 1180, 1491
HpyCH4V TGCA 7 cut(s) 227, 544, 551, 563, 754, 821, 1361
HpyF10VI GCNNNNNNNGC 4 cut(s) 869, 1087, 1218, 1441
HpyF3I CTNAG 5 cut(s) 312, 524, 658, 1303, 1421
HpySE526I ACGT 3 cut(s) 536, 1180, 1491
Hsp92I GRCGYC 1 cut(s) 1180
Hsp92II CATG 8 cut(s) 131, 284, 302, 480, 854, 971, 1463, 1529
Kpn2I TCCGGA 1 cut(s) 1536
KpnI GGTACC 1 cut(s) 332
Kzo9I GATC 6 cut(s) 70, 180, 308, 676, 1008, 1234
LmnI GCTCC 4 cut(s) 451, 825, 1078, 1480
Lsp1109I GCAGC 2 cut(s) 455, 913
LweI GCATC 3 cut(s) 553, 741, 1567
MabI ACCWGGT 1 cut(s) 463
MaeI CTAG 4 cut(s) 345, 359, 1430, 1470
MaeII ACGT 3 cut(s) 536, 1180, 1491
MaeIII GTNAC 5 cut(s) 155, 430, 485, 1047, 1227
MalI GATC 6 cut(s) 72, 182, 310, 678, 1010, 1236
MbiI CCGCTC 2 cut(s) 717, 1221
MboI GATC 6 cut(s) 70, 180, 308, 676, 1008, 1234
MboII GAAGA 9 cut(s) 76, 182, 249, 428, 431, 599, 1076, 1177, 1466
MflI RGATCY 1 cut(s) 308
MluCI AATT 6 cut(s) 552, 846, 941, 1016, 1191, 1398
MlyI GAGTC 1 cut(s) 1516
MmeI TCCRAC 2 cut(s) 320, 1134
Mph1103I ATGCAT 1 cut(s) 1363
MroI TCCGGA 1 cut(s) 1536
MroXI GAANNNNTTC 1 cut(s) 423
MseI TTAA 4 cut(s) 239, 270, 1245, 1497
MslI CAYNNNNRTG 3 cut(s) 54, 481, 1037
MspI CCGG 3 cut(s) 623, 1337, 1537
MspR9I CCNGG 4 cut(s) 198, 465, 1325, 1338
MvaI CCWGG 3 cut(s) 198, 465, 1325
MvnI CGCG 2 cut(s) 383, 1058
MwoI GCNNNNNNNGC 4 cut(s) 869, 1087, 1218, 1441
NciI CCSGG 1 cut(s) 1338
NdeII GATC 6 cut(s) 70, 180, 308, 676, 1008, 1234
NlaIII CATG 8 cut(s) 131, 284, 302, 480, 854, 971, 1463, 1529
NlaIV GGNNCC 2 cut(s) 330, 621
NmuCI GTSAC 2 cut(s) 485, 1047
NsiI ATGCAT 1 cut(s) 1363
NspI RCATGY 3 cut(s) 131, 302, 1463
PagI TCATGA 1 cut(s) 850
PciI ACATGT 3 cut(s) 127, 298, 1459
PdmI GAANNNNTTC 1 cut(s) 423
PfeI GAWTC 4 cut(s) 19, 134, 218, 979
PflMI CCANNNNNTGG 1 cut(s) 1261
PkrI GCNGC 2 cut(s) 445, 928
PleI GAGTC 1 cut(s) 1516
PpsI GAGTC 1 cut(s) 1516
Ppu21I YACGTR 1 cut(s) 537
PscI ACATGT 3 cut(s) 127, 298, 1459
PsiI TTATAA 1 cut(s) 150
Psp6I CCWGG 3 cut(s) 196, 463, 1323
PspGI CCWGG 3 cut(s) 196, 463, 1323
PspN4I GGNNCC 2 cut(s) 330, 621
PspPI GGNCC 4 cut(s) 116, 176, 470, 1433
PsrI GAACNNNNNNTAC 2 cut(s) 1371, 1403
PstI CTGCAG 1 cut(s) 229
PsuI RGATCY 1 cut(s) 308
RsaI GTAC 3 cut(s) 330, 702, 837
RsaNI GTAC 3 cut(s) 329, 701, 836
RseI CAYNNNNRTG 3 cut(s) 54, 481, 1037
SaqAI TTAA 4 cut(s) 239, 270, 1245, 1497
SatI GCNGC 2 cut(s) 444, 927
Sau3AI GATC 6 cut(s) 70, 180, 308, 676, 1008, 1234
Sau96I GGNCC 4 cut(s) 116, 176, 470, 1433
SchI GAGTC 1 cut(s) 1516
ScrFI CCNGG 4 cut(s) 198, 465, 1325, 1338
SexAI ACCWGGT 1 cut(s) 463
SfaNI GCATC 3 cut(s) 553, 741, 1567
SfcI CTRYAG 1 cut(s) 225
SinI GGWCC 1 cut(s) 176
SmiMI CAYNNNNRTG 3 cut(s) 54, 481, 1037
SmlI CTYRAG 1 cut(s) 33
SmoI CTYRAG 1 cut(s) 33
SpeI ACTAGT 1 cut(s) 358
Sse9I AATT 6 cut(s) 552, 846, 941, 1016, 1191, 1398
SsiI CCGC 4 cut(s) 383, 715, 1169, 1219
SspMI CTAG 4 cut(s) 345, 359, 1430, 1470
StyD4I CCNGG 4 cut(s) 196, 463, 1323, 1336
StyI CCWWGG 1 cut(s) 1429
TaaI ACNGT 1 cut(s) 1311
TaiI ACGT 3 cut(s) 539, 1183, 1494
TaqI TCGA 4 cut(s) 112, 231, 886, 939
TaqII GACCGA 1 cut(s) 193
TasI AATT 6 cut(s) 552, 846, 941, 1016, 1191, 1398
TfiI GAWTC 4 cut(s) 19, 134, 218, 979
Tru1I TTAA 4 cut(s) 239, 270, 1245, 1497
Tru9I TTAA 4 cut(s) 239, 270, 1245, 1497
TscAI CASTG 3 cut(s) 802, 1321, 1381
TseFI GTSAC 2 cut(s) 485, 1047
TseI GCWGC 2 cut(s) 443, 926
Tsp45I GTSAC 2 cut(s) 485, 1047
TspDTI ATGAA 6 cut(s) 429, 588, 839, 867, 948, 968
TspGWI ACGGA 2 cut(s) 438, 610
TspRI CASTG 3 cut(s) 802, 1321, 1381
Van91I CCANNNNNTGG 1 cut(s) 1261
VpaK11BI GGWCC 1 cut(s) 176
XceI RCATGY 3 cut(s) 131, 302, 1463
XmaJI CCTAGG 1 cut(s) 1429
XmnI GAANNNNTTC 1 cut(s) 423
XspI CTAG 4 cut(s) 345, 359, 1430, 1470
ZraI GACGTC 1 cut(s) 1181
Zsp2I ATGCAT 1 cut(s) 1363
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.