Rorug02G0238900

CorA-like Mg2+ transporter protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
24195436 .. 24195756
321 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0238900.1

Sequence Viewer

Length: 321 bp
ATGTTTGCAGCAGAACATAATCACTTCAGTGGAGTAATCCCTAAATCCATCTCTAATGCTTCTGAGCTTCGAATGCTAGAACTGGGAGGTAGCTCTTTTTCTGGATATATTCCAAGCACGCTATACCTCTTGACAAACCTTGAACAGCTCGGATTATCCCTCAATAATTTGACCATTGATACCTCTACTCGAGAAGTTAATATTTTTTCTTGTCTGCCAAATCTTAGAAATTTGAGGGAATTAGACTTCGGAGAGAATCCATTAAATGCCGAGCTTTCTATTTCCTTTGGCAATTTCTCTGCATCACTTCAATATCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

106

Amino Acids

11.69

Weight (kDa)

4.74

Isoelectric Point (pI)

30.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 229
AcuI CTGAAG 1 cut(s) 10
AgsI TTSAA 2 cut(s) 143, 311
AleI CACNNNNGTG 1 cut(s) 27
AluBI AGCT 4 cut(s) 67, 93, 148, 274
AluI AGCT 4 cut(s) 67, 93, 148, 274
Ama87I CYCGRG 1 cut(s) 189
ApeKI GCWGC 1 cut(s) 8
ApoI RAATTY 1 cut(s) 229
AsuII TTCGAA 1 cut(s) 70
AvaI CYCGRG 1 cut(s) 189
BbvI GCAGC 1 cut(s) 20
BccI CCATC 1 cut(s) 56
BfaI CTAG 1 cut(s) 77
BisI GCNGC 1 cut(s) 9
BlsI GCNGC 1 cut(s) 10
BmeT110I CYCGRG 1 cut(s) 189
BmrI ACTGGG 1 cut(s) 92
BmsI GCATC 1 cut(s) 311
BmuI ACTGGG 1 cut(s) 92
Bpu14I TTCGAA 1 cut(s) 70
Bse1I ACTGG 1 cut(s) 87
BseMII CTCAG 1 cut(s) 54
BseNI ACTGG 1 cut(s) 87
BseXI GCAGC 1 cut(s) 20
BsiHKCI CYCGRG 1 cut(s) 189
BsmI GAATGC 1 cut(s) 78
BsoBI CYCGRG 1 cut(s) 189
Bsp119I TTCGAA 1 cut(s) 70
BspCNI CTCAG 1 cut(s) 55
BspT104I TTCGAA 1 cut(s) 70
BsrI ACTGG 1 cut(s) 87
BstBI TTCGAA 1 cut(s) 70
BstC8I GCNNGC 1 cut(s) 119
BstDEI CTNAG 2 cut(s) 63, 224
BstMWI GCNNNNNNNGC 1 cut(s) 73
BstV1I GCAGC 1 cut(s) 20
BtsIMutI CAGTG 1 cut(s) 34
Cac8I GCNNGC 1 cut(s) 119
CviJI RGCY 4 cut(s) 67, 93, 148, 274
CviKI_1 RGCY 4 cut(s) 67, 93, 148, 274
DdeI CTNAG 2 cut(s) 63, 224
Eco57I CTGAAG 1 cut(s) 10
Eco88I CYCGRG 1 cut(s) 189
FaiI YATR 3 cut(s) 18, 108, 124
Fnu4HI GCNGC 1 cut(s) 9
Fsp4HI GCNGC 1 cut(s) 9
FspBI CTAG 1 cut(s) 77
GluI GCNGC 1 cut(s) 9
HinfI GANTC 1 cut(s) 256
Hpy188I TCNGA 3 cut(s) 64, 152, 251
Hpy188III TCNNGA 3 cut(s) 102, 130, 191
HpyCH4V TGCA 2 cut(s) 8, 302
HpyF10VI GCNNNNNNNGC 1 cut(s) 73
HpyF3I CTNAG 2 cut(s) 63, 224
LpnPI CCDG 2 cut(s) 68, 87
Lsp1109I GCAGC 1 cut(s) 20
LweI GCATC 1 cut(s) 311
MaeI CTAG 1 cut(s) 77
MluCI AATT 4 cut(s) 166, 229, 239, 292
MnlI CCTC 5 cut(s) 80, 137, 170, 193, 228
MseI TTAA 3 cut(s) 198, 263, 319
MslI CAYNNNNRTG 1 cut(s) 27
Mva1269I GAATGC 1 cut(s) 78
MwoI GCNNNNNNNGC 1 cut(s) 73
NmeAIII GCCGAG 1 cut(s) 295
NspV TTCGAA 1 cut(s) 70
OliI CACNNNNGTG 1 cut(s) 27
PaeR7I CTCGAG 1 cut(s) 189
PctI GAATGC 1 cut(s) 78
PfeI GAWTC 1 cut(s) 256
PkrI GCNGC 1 cut(s) 10
RseI CAYNNNNRTG 1 cut(s) 27
SaqAI TTAA 3 cut(s) 198, 263, 319
SatI GCNGC 1 cut(s) 9
SetI ASST 8 cut(s) 69, 91, 95, 129, 141, 150, 185, 276
SfaNI GCATC 1 cut(s) 311
Sfr274I CTCGAG 1 cut(s) 189
SfuI TTCGAA 1 cut(s) 70
SlaI CTCGAG 1 cut(s) 189
SmiMI CAYNNNNRTG 1 cut(s) 27
SmlI CTYRAG 1 cut(s) 189
SmoI CTYRAG 1 cut(s) 189
Sse9I AATT 4 cut(s) 166, 229, 239, 292
SspI AATATT 1 cut(s) 202
SspMI CTAG 1 cut(s) 77
TaqI TCGA 2 cut(s) 70, 190
TasI AATT 4 cut(s) 166, 229, 239, 292
TfiI GAWTC 1 cut(s) 256
Tru1I TTAA 3 cut(s) 198, 263, 319
Tru9I TTAA 3 cut(s) 198, 263, 319
TscAI CASTG 1 cut(s) 34
TseI GCWGC 1 cut(s) 8
TspRI CASTG 1 cut(s) 34
XapI RAATTY 1 cut(s) 229
XhoI CTCGAG 1 cut(s) 189
XspI CTAG 1 cut(s) 77
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.