Rh2AG297500

CorA-like Mg2+ transporter protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0002432
Physical Location & Seq
Reverse (-)
36880910 .. 36881936
1027 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG297500.1

Sequence Viewer

Length: 1011 bp
ATGAAACACCTTTTGTATGAGGTCCCAGTTAGAGTTTCTGGGGGGTTGTTATTTGAGCTCTTGGGGCACACATTTGGTGTTCCATTTGTCGACGAGAATGATATTCCCATTGTACTTCGTTCCTGGCAAGCCCAAAACTTCCTTGTAACTGTTTTGCATATCAAAGGGCCTATATCAAGTATAAATGTGTTGGGCATCAAAGAAGTTGAGGAACTTCTTTCCGCTGGAGGCTATAATGTACCTAGAACAGTGCATGAAGTCATAGCACATCTTACTAGCCGCCTTGCTCGCTGGGATGATAGGCTATTCCGCAAGTCCATATTTGGTGCCGTAGATGAGTTTGAATTGAAGTTTATGAACATGAGAAACCATGAAGAGATAAATCTTTTTAGCATAATTCTCAACCAAGAAATCAGAGAGTTATCAAAACAGGTCATCAGAGTAAAGTGGTCACTTCATGCAAGAGAGGAGATTCTGTTTGAGCTTCTTGAACATTTGAGAGGAAATACAACAAGAAGTTTGTTGGAGAAAATAAGAAAGAGCACAAGAGAAATGATTGAGGAGCAAGAAAAAGTTAGTGGCCGCTTATTTACAGTTCAAGATGTGATGCAGAGCACTGTTCGTGCATGGTTGCAGGACAGAAGCCTTAGAGTGACACATAATCTTGGTGTTTTTGGTGGCTGTGGCCTTGTAATTTCCATCATCACTGGACTTTTTGGAATCAATGTTGATGGAATGCCTGGAGCAAAAAATGCACCATATGCCTTCGCTGTATTTTCAGCCATTCTCTTCTTTATTGGATTCGTGCTTATTCGACTCGGCAACCTTTCCCTTGGGTTGAAAAAGCCTATTTCCGAAAAGCAAGTTGAAGCTAGAAAGTCGGAGCTTCAAGAGTTGGTTCAGAAGTTTCAGCACGAGGCAGAGACTCATGCCCTGGTTCGTAAAAATGTGGCTAGGAATAATTTACCCCCAGGAATGAGGGAAGAAGAACAAAAACTATATACTCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CorA

Protein Analysis

336

Amino Acids

38.38

Weight (kDa)

8.89

Isoelectric Point (pI)

39.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CorA PF01544 136 - 270 1.5e-09 CorA-like Mg2+ transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 326
AccI GTMKAC 1 cut(s) 90
AciI CCGC 4 cut(s) 222, 280, 310, 583
AcoI YGGCCR 1 cut(s) 580
AfaI GTAC 2 cut(s) 114, 240
AgsI TTSAA 7 cut(s) 344, 349, 491, 599, 841, 869, 890
AjnI CCWGG 4 cut(s) 122, 739, 933, 970
AluBI AGCT 4 cut(s) 58, 484, 872, 886
AluI AGCT 4 cut(s) 58, 484, 872, 886
Alw21I GWGCWC 3 cut(s) 60, 545, 617
Alw26I GTCTC 1 cut(s) 917
AoxI GGCC 3 cut(s) 167, 580, 685
AspS9I GGNCC 2 cut(s) 22, 167
AvaII GGWCC 1 cut(s) 22
BaeGI GKGCMC 1 cut(s) 69
BanI GGYRCC 1 cut(s) 326
BanII GRGCYC 1 cut(s) 60
BauI CACGAG 1 cut(s) 914
Bbv12I GWGCWC 3 cut(s) 60, 545, 617
BccI CCATC 2 cut(s) 707, 725
BceAI ACGGC 1 cut(s) 314
BciT130I CCWGG 4 cut(s) 124, 741, 935, 972
BcoDI GTCTC 1 cut(s) 917
BfaI CTAG 4 cut(s) 243, 276, 873, 954
BisI GCNGC 2 cut(s) 280, 583
BlsI GCNGC 2 cut(s) 281, 584
Bme1390I CCNGG 4 cut(s) 124, 741, 935, 972
Bme18I GGWCC 1 cut(s) 22
BmgT120I GGNCC 2 cut(s) 22, 167
BmiI GGNNCC 2 cut(s) 24, 328
BmrFI CCNGG 4 cut(s) 124, 741, 935, 972
BmrI ACTGGG 1 cut(s) 20
BmsI GCATC 2 cut(s) 204, 597
BmuI ACTGGG 1 cut(s) 20
BpmI CTGGAG 2 cut(s) 246, 762
BsaJI CCNNGG 3 cut(s) 832, 933, 970
BsaXI ACNNNNNCTCC 2 cut(s) 461, 491
Bse1I ACTGG 2 cut(s) 26, 712
BseBI CCWGG 4 cut(s) 124, 741, 935, 972
BseDI CCNNGG 3 cut(s) 832, 933, 970
BseGI GGATG 1 cut(s) 301
BseNI ACTGG 2 cut(s) 26, 712
BseRI GAGGAG 2 cut(s) 482, 575
BseSI GKGCMC 1 cut(s) 69
BseYI CCCAGC 1 cut(s) 291
BshFI GGCC 3 cut(s) 169, 582, 687
BshNI GGYRCC 1 cut(s) 326
BsiHKAI GWGCWC 3 cut(s) 60, 545, 617
BslFI GGGAC 1 cut(s) 8
BsmAI GTCTC 1 cut(s) 917
BsmFI GGGAC 1 cut(s) 8
BsmI GAATGC 1 cut(s) 741
BsnI GGCC 3 cut(s) 169, 582, 687
Bsp1286I GDGCHC 4 cut(s) 60, 69, 545, 617
BspACI CCGC 4 cut(s) 222, 280, 310, 583
BspANI GGCC 3 cut(s) 169, 582, 687
BspLI GGNNCC 2 cut(s) 24, 328
BspT107I GGYRCC 1 cut(s) 326
BsrI ACTGG 2 cut(s) 26, 712
BssECI CCNNGG 3 cut(s) 832, 933, 970
BssSI CACGAG 1 cut(s) 914
BssT1I CCWWGG 1 cut(s) 832
Bst2BI CACGAG 1 cut(s) 914
Bst2UI CCWGG 4 cut(s) 124, 741, 935, 972
Bst4CI ACNGT 4 cut(s) 151, 250, 595, 619
Bst6I CTCTTC 2 cut(s) 369, 794
BstAPI GCANNNNNTGC 2 cut(s) 752, 761
BstC8I GCNNGC 2 cut(s) 129, 289
BstDEI CTNAG 1 cut(s) 647
BstF5I GGATG 1 cut(s) 301
BstMAI GTCTC 1 cut(s) 917
BstMWI GCNNNNNNNGC 4 cut(s) 64, 288, 752, 761
BstNI CCWGG 4 cut(s) 124, 741, 935, 972
BstSCI CCNGG 4 cut(s) 122, 739, 933, 970
BstSLI GKGCMC 1 cut(s) 69
BsuRI GGCC 3 cut(s) 169, 582, 687
BtsCI GGATG 1 cut(s) 301
BtsIMutI CAGTG 3 cut(s) 255, 615, 705
Cac8I GCNNGC 2 cut(s) 129, 289
Cfr13I GGNCC 2 cut(s) 22, 167
Csp6I GTAC 2 cut(s) 113, 239
CviAII CATG 6 cut(s) 254, 361, 371, 458, 627, 929
CviQI GTAC 2 cut(s) 113, 239
DdeI CTNAG 1 cut(s) 647
EaeI YGGCCR 1 cut(s) 580
Eam1104I CTCTTC 2 cut(s) 369, 794
EarI CTCTTC 2 cut(s) 369, 794
Ecl136II GAGCTC 1 cut(s) 58
Eco130I CCWWGG 1 cut(s) 832
Eco24I GRGCYC 1 cut(s) 60
Eco47I GGWCC 1 cut(s) 22
Eco53kI GAGCTC 1 cut(s) 58
EcoICRI GAGCTC 1 cut(s) 58
EcoO109I RGGNCCY 2 cut(s) 22, 167
EcoRII CCWGG 4 cut(s) 122, 739, 933, 970
EcoT14I CCWWGG 1 cut(s) 832
EcoT38I GRGCYC 1 cut(s) 60
ErhI CCWWGG 1 cut(s) 832
FaeI CATG 6 cut(s) 257, 364, 374, 461, 630, 932
FaqI GGGAC 1 cut(s) 8
FatI CATG 6 cut(s) 253, 360, 370, 457, 626, 928
FauNDI CATATG 1 cut(s) 760
FblI GTMKAC 1 cut(s) 90
Fnu4HI GCNGC 2 cut(s) 280, 583
FokI GGATG 1 cut(s) 308
FriOI GRGCYC 1 cut(s) 60
Fsp4HI GCNGC 2 cut(s) 280, 583
FspBI CTAG 4 cut(s) 243, 276, 873, 954
GluI GCNGC 2 cut(s) 280, 583
GsaI CCCAGC 1 cut(s) 295
GsuI CTGGAG 2 cut(s) 246, 762
HaeIII GGCC 3 cut(s) 169, 582, 687
Hin1II CATG 6 cut(s) 257, 364, 374, 461, 630, 932
HincII GTYRAC 1 cut(s) 91
HindII GTYRAC 1 cut(s) 91
HinfI GANTC 5 cut(s) 472, 720, 801, 816, 925
Hpy166II GTNNAC 1 cut(s) 91
Hpy188I TCNGA 5 cut(s) 416, 440, 856, 883, 903
Hpy188III TCNNGA 3 cut(s) 488, 599, 890
Hpy8I GTNNAC 1 cut(s) 91
Hpy99I CGWCG 1 cut(s) 95
HpyAV CCTTC 1 cut(s) 775
HpyCH4III ACNGT 4 cut(s) 151, 250, 595, 619
HpyCH4V TGCA 7 cut(s) 157, 253, 461, 610, 626, 634, 755
HpyF10VI GCNNNNNNNGC 4 cut(s) 64, 288, 752, 761
HpyF3I CTNAG 1 cut(s) 647
Hsp92II CATG 6 cut(s) 257, 364, 374, 461, 630, 932
LmnI GCTCC 3 cut(s) 562, 743, 883
LweI GCATC 2 cut(s) 204, 597
MaeI CTAG 4 cut(s) 243, 276, 873, 954
MaeIII GTNAC 3 cut(s) 145, 450, 652
MboII GAAGA 4 cut(s) 386, 781, 995, 998
MhlI GDGCHC 4 cut(s) 60, 69, 545, 617
MluCI AATT 4 cut(s) 344, 396, 693, 961
MlyI GAGTC 2 cut(s) 810, 919
MmeI TCCRAC 2 cut(s) 504, 861
MnlI CCTC 8 cut(s) 13, 202, 221, 460, 494, 553, 910, 972
MspA1I CMGCKG 1 cut(s) 224
MspR9I CCNGG 4 cut(s) 124, 741, 935, 972
Mva1269I GAATGC 1 cut(s) 741
MvaI CCWGG 4 cut(s) 124, 741, 935, 972
MwoI GCNNNNNNNGC 4 cut(s) 64, 288, 752, 761
NdeI CATATG 1 cut(s) 760
NlaIII CATG 6 cut(s) 257, 364, 374, 461, 630, 932
NlaIV GGNNCC 2 cut(s) 24, 328
NmeAIII GCCGAG 1 cut(s) 798
NmuCI GTSAC 2 cut(s) 450, 652
PctI GAATGC 1 cut(s) 741
PfeI GAWTC 3 cut(s) 472, 720, 801
PkrI GCNGC 2 cut(s) 281, 584
PleI GAGTC 2 cut(s) 810, 919
PpsI GAGTC 2 cut(s) 810, 919
PpuMI RGGWCCY 1 cut(s) 22
Psp124BI GAGCTC 1 cut(s) 60
Psp5II RGGWCCY 1 cut(s) 22
Psp6I CCWGG 4 cut(s) 122, 739, 933, 970
PspFI CCCAGC 1 cut(s) 291
PspGI CCWGG 4 cut(s) 122, 739, 933, 970
PspN4I GGNNCC 2 cut(s) 24, 328
PspPI GGNCC 2 cut(s) 22, 167
PspPPI RGGWCCY 1 cut(s) 22
RsaI GTAC 2 cut(s) 114, 240
RsaNI GTAC 2 cut(s) 113, 239
SacI GAGCTC 1 cut(s) 60
SalI GTCGAC 1 cut(s) 89
SatI GCNGC 2 cut(s) 280, 583
Sau96I GGNCC 2 cut(s) 22, 167
SchI GAGTC 2 cut(s) 810, 919
ScrFI CCNGG 4 cut(s) 124, 741, 935, 972
SduI GDGCHC 4 cut(s) 60, 69, 545, 617
SetI ASST 9 cut(s) 12, 24, 60, 244, 435, 486, 828, 874, 888
SfaNI GCATC 2 cut(s) 204, 597
SinI GGWCC 1 cut(s) 22
Sse9I AATT 4 cut(s) 344, 396, 693, 961
SsiI CCGC 4 cut(s) 222, 280, 310, 583
SspMI CTAG 4 cut(s) 243, 276, 873, 954
SstI GAGCTC 1 cut(s) 60
StyD4I CCNGG 4 cut(s) 122, 739, 933, 970
StyI CCWWGG 1 cut(s) 832
TaaI ACNGT 4 cut(s) 151, 250, 595, 619
TaqI TCGA 2 cut(s) 90, 814
TasI AATT 4 cut(s) 344, 396, 693, 961
TatI WGTACW 1 cut(s) 112
TauI GCSGC 2 cut(s) 282, 585
TfiI GAWTC 3 cut(s) 472, 720, 801
TscAI CASTG 3 cut(s) 255, 622, 712
TseFI GTSAC 2 cut(s) 450, 652
Tsp45I GTSAC 2 cut(s) 450, 652
TspDTI ATGAA 5 cut(s) 17, 270, 371, 387, 446
TspRI CASTG 3 cut(s) 255, 622, 712
VpaK11BI GGWCC 1 cut(s) 22
XmiI GTMKAC 1 cut(s) 90
XspI CTAG 4 cut(s) 243, 276, 873, 954
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.