Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004569

Physical Location & Seq

Genomic Coordinates Reverse (-)

12398428 .. 12401036

Gene Structure 2609 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G34065.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1038 bp

ATGACGAAAGCTCTCTCTGGCTTCTGTTGCTCTCTCAGTCTCTCTACCTTGGTTAGATCTTCGTCTTCTCACATGGATAGTGACATTGTTTCCAGTAGCATAGATCGATCTCAGACAGCAATGCCTGATGCTTTAGCATTCAAGAGTATCAATGATCCTATCAAGAACCAGATCAATAGTTGTGCTGCAATCTGTGTTAAGCAAGATGATCCATGCCATTTCTTGCGTGTCCTTTATGAGTCTCTGATAACAGGAGGGTTAGCTGGTGTTGTGGTGGAAGCTGCTTTGTATCCAATTGATACAATCAAAACTCGAATACAGGTAGCTCGGGATGGTGGAAAGATAATATGGAAGGGATTATACTCTGGTCTTGGTGGAAATCTTGTCGGTGTCTTACCTGCTTCGGCTCTATTTTTTGGTGTATATGAACCAACCAAACAGAAGCTGCTAAAGGTTTTACCAGATAATCTTAGTGCGGTTGCACATTTGGCTGCAGGTGCGTTAGGAGGTGCTGTTTCATCTATTGTTCGGGTACCAACAGAAGTTGTGAAACAGCGGATGCAGACTGGTCAATTTGTTTCGGCCCCTGACGCTGTTCGCCTTATTATAGCCAAGGAGGGCTTTGGAGGCATGTATGCGGGTTATGGATCCTTCTTATTGCGAGATTTGCCTTTTGACGCGCTCCAGTTTTGTGTTTATGAGCAATTACGAATTGGATACAAGTTGGCTGCAAGAAGAGATCTAAATGATCCAGAGAATGCGATGATTGGTGCTTTTGCTGGTGCTGTCACTGGAGTTTTGACCACTCCTCTTGATGTTATCAAAACCAGATTAATGGTTCAGGGCTCAGGAACTCAGTATAAAGGAGTTTCGGATTGCATTAAGACGATAATAAGAGAAGAAGGTTCATCAGCTTTGTGGAAGGGAATGGGTCCAAGGGTATTGTGGATAGGTATTGGAGGTTCAATTTTCTTTGGTGTTTTGGAAAAGACAAAGCAGATTCTTTCAGAGAGAAGCCAAAAGAGTCACAATGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000095 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006810 GO:0006839 GO:0006855 GO:0008150 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0015238 GO:0015805 GO:0015893 GO:0016020 GO:0016021 GO:0019866 GO:0022857 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051181 GO:0051182 GO:0051184 GO:0051185 GO:0051234 GO:0055085 GO:0071702 GO:0072348 GO:1901682 GO:1901962

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

345

Amino Acids

36.88

Weight (kDa)

9.09

Isoelectric Point (pI)

31.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mito_carr	PF00153	72 - 144	6e-12	Mitochondrial carrier protein
Mito_carr	PF00153	149 - 230	1.5e-17	Mitochondrial carrier protein
Mito_carr	PF00153	245 - 330	2.6e-25	Mitochondrial carrier protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004569)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G34065 AT1G34065
fragaria_vesca	FvH4_2g12990 FvH4_2g12990 FvH4_2g12990 FvH4_2g12990
malus_domestica	MD05G1033900.v1.1
prunus_persica	Prupe.8G041700_v2.0.a1 Prupe.8G041700_v2.0.a1 Prupe.8G041700_v2.0.a1 Prupe.8G041700_v2.0.a1 Prupe.8G041700_v2.0.a1 Prupe.8G041700_v2.0.a1 Prupe.8G041700_v2.0.a1
pyrus_communis	pycom05g02450
rosa_chinensis	RchiOBHm_Chr6g0274151
rosa_laevigata	RLG00000013576
rosa_multiflora	Rmu_sc0000939.1_g000009 Rmu_sc0001939.1_g000020 Rmu_sc0002577.1_g000002
rosa_roxburghii	Rroxscaffold_7G00194510
rosa_rugosa	Rorug06G0079400 Rorug06G0079500
rosa_samantha	Rh4CG128700 Rh6AG194700 Rh6CG199100 Rh6CG438900 Rh6DG190600
rosa_wichuraiana	Rw0G007910 Rw5G039420 Rw6G017010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	485
Acc36I	ACCTGC	2 cut(s)	406, 485
Acc65I	GGTACC	1 cut(s)	532
AccB1I	GGYRCC	1 cut(s)	532
AccII	CGCG	1 cut(s)	680
AciI	CCGC	3 cut(s)	476, 556, 638
AclWI	GGATC	5 cut(s)	149, 203, 642, 655, 743
AfaI	GTAC	1 cut(s)	534
AgsI	TTSAA	2 cut(s)	142, 966
AluBI	AGCT	6 cut(s)	11, 263, 281, 326, 445, 914
AluI	AGCT	6 cut(s)	11, 263, 281, 326, 445, 914
Alw26I	GTCTC	2 cut(s)	44, 246
AlwI	GGATC	5 cut(s)	149, 203, 642, 655, 743
AlwNI	CAGNNNCTG	1 cut(s)	445
Ama87I	CYCGRG	1 cut(s)	327
AoxI	GGCC	1 cut(s)	582
ApeKI	GCWGC	5 cut(s)	185, 281, 445, 491, 728
AseI	ATTAAT	1 cut(s)	833
Asp718I	GGTACC	1 cut(s)	532
AspLEI	GCGC	1 cut(s)	682
AspS9I	GGNCC	2 cut(s)	583, 932
AvaI	CYCGRG	1 cut(s)	327
AvaII	GGWCC	1 cut(s)	932
BamHI	GGATCC	1 cut(s)	647
BanI	GGYRCC	1 cut(s)	532
BanII	GRGCYC	1 cut(s)	848
BarI	GAAGNNNNNNTAC	2 cut(s)	344, 376
BbsI	GAAGAC	1 cut(s)	57
BbvI	GCAGC	5 cut(s)	172, 268, 432, 478, 715
BccI	CCATC	1 cut(s)	326
BciVI	GTATCC	2 cut(s)	300, 710
BcoDI	GTCTC	2 cut(s)	44, 246
BfmI	CTRYAG	1 cut(s)	492
BfuAI	ACCTGC	2 cut(s)	406, 485
BfuI	GTATCC	2 cut(s)	300, 710
BglII	AGATCT	2 cut(s)	56, 739
BisI	GCNGC	5 cut(s)	186, 282, 446, 492, 729
BlsI	GCNGC	5 cut(s)	187, 283, 447, 493, 730
Bme18I	GGWCC	1 cut(s)	932
BmeT110I	CYCGRG	1 cut(s)	327
BmgT120I	GGNCC	2 cut(s)	583, 932
BmiI	GGNNCC	4 cut(s)	534, 585, 649, 933
BmsI	GCATC	2 cut(s)	118, 549
BpiI	GAAGAC	1 cut(s)	57
BpmI	CTGGAG	2 cut(s)	668, 813
Bpu10I	CCTNAGC	1 cut(s)	847
Bsa29I	ATCGAT	1 cut(s)	106
BsaJI	CCNNGG	3 cut(s)	48, 612, 935
BsaXI	ACNNNNNCTCC	2 cut(s)	498, 528
Bse1I	ACTGG	4 cut(s)	93, 571, 685, 796
Bse3DI	GCAATG	1 cut(s)	126
BseCI	ATCGAT	1 cut(s)	106
BseDI	CCNNGG	3 cut(s)	48, 612, 935
BseGI	GGATG	2 cut(s)	337, 564
BseMI	GCAATG	1 cut(s)	126
BseMII	CTCAG	4 cut(s)	49, 125, 861, 869
BseNI	ACTGG	4 cut(s)	93, 571, 685, 796
BseRI	GAGGAG	1 cut(s)	798
BseXI	GCAGC	5 cut(s)	172, 268, 432, 478, 715
Bsh1236I	CGCG	1 cut(s)	680
BshFI	GGCC	1 cut(s)	584
BshNI	GGYRCC	1 cut(s)	532
BshVI	ATCGAT	1 cut(s)	106
BsiHKCI	CYCGRG	1 cut(s)	327
BsmAI	GTCTC	2 cut(s)	44, 246
BsmI	GAATGC	2 cut(s)	137, 763
BsnI	GGCC	1 cut(s)	584
BsoBI	CYCGRG	1 cut(s)	327
Bsp1286I	GDGCHC	1 cut(s)	848
Bsp143I	GATC	9 cut(s)	56, 103, 107, 154, 171, 208, 647, 739, 748
BspACI	CCGC	3 cut(s)	476, 556, 638
BspANI	GGCC	1 cut(s)	584
BspCNI	CTCAG	4 cut(s)	48, 124, 860, 868
BspDI	ATCGAT	1 cut(s)	106
BspFNI	CGCG	1 cut(s)	680
BspLI	GGNNCC	4 cut(s)	534, 585, 649, 933
BspMAI	CTGCAG	1 cut(s)	496
BspMI	ACCTGC	2 cut(s)	406, 485
BspPI	GGATC	5 cut(s)	149, 203, 642, 655, 743
BspT107I	GGYRCC	1 cut(s)	532
BsrDI	GCAATG	1 cut(s)	126
BsrI	ACTGG	4 cut(s)	93, 571, 685, 796
BssECI	CCNNGG	3 cut(s)	48, 612, 935
BssMI	GATC	9 cut(s)	56, 103, 107, 154, 171, 208, 647, 739, 748
BssT1I	CCWWGG	3 cut(s)	48, 612, 935
Bst6I	CTCTTC	1 cut(s)	730
BstDEI	CTNAG	5 cut(s)	35, 111, 470, 847, 855
BstF5I	GGATG	2 cut(s)	337, 564
BstFNI	CGCG	1 cut(s)	680
BstHHI	GCGC	1 cut(s)	682
BstKTI	GATC	9 cut(s)	59, 106, 110, 157, 174, 211, 650, 742, 751
BstMAI	GTCTC	2 cut(s)	44, 246
BstMBI	GATC	9 cut(s)	56, 103, 107, 154, 171, 208, 647, 739, 748
BstMWI	GCNNNNNNNGC	6 cut(s)	27, 488, 497, 590, 627, 667
BstNSI	RCATGY	1 cut(s)	634
BstSFI	CTRYAG	1 cut(s)	492
BstUI	CGCG	1 cut(s)	680
BstV1I	GCAGC	5 cut(s)	172, 268, 432, 478, 715
BstV2I	GAAGAC	1 cut(s)	57
BstX2I	RGATCY	3 cut(s)	56, 647, 739
BstXI	CCANNNNNNTGG	1 cut(s)	835
BstYI	RGATCY	3 cut(s)	56, 647, 739
Bsu15I	ATCGAT	1 cut(s)	106
BsuI	GTATCC	2 cut(s)	300, 710
BsuRI	GGCC	1 cut(s)	584
BsuTUI	ATCGAT	1 cut(s)	106
BtgZI	GCGATG	1 cut(s)	776
BtsCI	GGATG	2 cut(s)	337, 564
BtsIMutI	CAGTG	1 cut(s)	789
BveI	ACCTGC	2 cut(s)	406, 485
CaiI	CAGNNNCTG	1 cut(s)	445
CfoI	GCGC	1 cut(s)	682
Cfr13I	GGNCC	2 cut(s)	583, 932
ClaI	ATCGAT	1 cut(s)	106
CseI	GACGC	2 cut(s)	599, 686
Csp6I	GTAC	1 cut(s)	533
CspCI	CAANNNNNGTGG	2 cut(s)	793, 828
CviAII	CATG	3 cut(s)	73, 213, 631
CviQI	GTAC	1 cut(s)	533
DdeI	CTNAG	5 cut(s)	35, 111, 470, 847, 855
DpnI	GATC	9 cut(s)	58, 105, 109, 156, 173, 210, 649, 741, 750
DpnII	GATC	9 cut(s)	56, 103, 107, 154, 171, 208, 647, 739, 748
Eam1104I	CTCTTC	1 cut(s)	730
EarI	CTCTTC	1 cut(s)	730
Eco130I	CCWWGG	3 cut(s)	48, 612, 935
Eco24I	GRGCYC	1 cut(s)	848
Eco47I	GGWCC	1 cut(s)	932
Eco88I	CYCGRG	1 cut(s)	327
EcoT14I	CCWWGG	3 cut(s)	48, 612, 935
EcoT38I	GRGCYC	1 cut(s)	848
ErhI	CCWWGG	3 cut(s)	48, 612, 935
FaeI	CATG	3 cut(s)	76, 216, 634
FalI	AAGNNNNNCTT	2 cut(s)	605, 637
FatI	CATG	3 cut(s)	72, 212, 630
FauI	CCCGC	1 cut(s)	631
Fnu4HI	GCNGC	5 cut(s)	186, 282, 446, 492, 729
FokI	GGATG	2 cut(s)	344, 571
FriOI	GRGCYC	1 cut(s)	848
Fsp4HI	GCNGC	5 cut(s)	186, 282, 446, 492, 729
GlaI	GCGC	1 cut(s)	681
GluI	GCNGC	5 cut(s)	186, 282, 446, 492, 729
GsuI	CTGGAG	2 cut(s)	668, 813
HaeIII	GGCC	1 cut(s)	584
HgaI	GACGC	2 cut(s)	599, 686
HhaI	GCGC	1 cut(s)	682
Hin1II	CATG	3 cut(s)	76, 216, 634
Hin6I	GCGC	1 cut(s)	680
HinP1I	GCGC	1 cut(s)	680
HinfI	GANTC	3 cut(s)	239, 1000, 1024
Hpy188I	TCNGA	4 cut(s)	114, 246, 874, 1009
Hpy188III	TCNNGA	6 cut(s)	142, 163, 329, 752, 812, 849
HpyAV	CCTTC	4 cut(s)	346, 661, 896, 916
HpyCH4V	TGCA	6 cut(s)	188, 482, 494, 562, 731, 879
HpyF10VI	GCNNNNNNNGC	6 cut(s)	27, 488, 497, 590, 627, 667
HpyF3I	CTNAG	5 cut(s)	35, 111, 470, 847, 855
Hsp92II	CATG	3 cut(s)	76, 216, 634
HspAI	GCGC	1 cut(s)	680
KpnI	GGTACC	1 cut(s)	536
Kzo9I	GATC	9 cut(s)	56, 103, 107, 154, 171, 208, 647, 739, 748
LmnI	GCTCC	1 cut(s)	687
Lsp1109I	GCAGC	5 cut(s)	172, 268, 432, 478, 715
LweI	GCATC	2 cut(s)	118, 549
MaeIII	GTNAC	3 cut(s)	80, 787, 1025
MalI	GATC	9 cut(s)	58, 105, 109, 156, 173, 210, 649, 741, 750
MboI	GATC	9 cut(s)	56, 103, 107, 154, 171, 208, 647, 739, 748
MboII	GAAGA	4 cut(s)	51, 57, 747, 911
MfeI	CAATTG	1 cut(s)	294
MflI	RGATCY	3 cut(s)	56, 647, 739
MhlI	GDGCHC	1 cut(s)	848
MluCI	AATT	5 cut(s)	294, 572, 704, 711, 966
MlyI	GAGTC	2 cut(s)	248, 1033
MnlI	CCTC	6 cut(s)	248, 500, 610, 620, 819, 953
MseI	TTAA	4 cut(s)	198, 833, 882, 1036
MspA1I	CMGCKG	1 cut(s)	556
MunI	CAATTG	1 cut(s)	294
Mva1269I	GAATGC	2 cut(s)	137, 763
MvnI	CGCG	1 cut(s)	680
MwoI	GCNNNNNNNGC	6 cut(s)	27, 488, 497, 590, 627, 667
NdeII	GATC	9 cut(s)	56, 103, 107, 154, 171, 208, 647, 739, 748
NlaIII	CATG	3 cut(s)	76, 216, 634
NlaIV	GGNNCC	4 cut(s)	534, 585, 649, 933
NmuCI	GTSAC	3 cut(s)	80, 787, 1025
NspI	RCATGY	1 cut(s)	634
PaqCI	CACCTGC	1 cut(s)	485
PctI	GAATGC	2 cut(s)	137, 763
PfeI	GAWTC	1 cut(s)	1000
PkrI	GCNGC	5 cut(s)	187, 283, 447, 493, 730
PleI	GAGTC	2 cut(s)	247, 1032
PpsI	GAGTC	2 cut(s)	247, 1032
PshBI	ATTAAT	1 cut(s)	833
PspN4I	GGNNCC	4 cut(s)	534, 585, 649, 933
PspPI	GGNCC	2 cut(s)	583, 932
PsrI	GAACNNNNNNTAC	2 cut(s)	946, 978
PstI	CTGCAG	1 cut(s)	496
PstNI	CAGNNNCTG	1 cut(s)	445
PsuI	RGATCY	3 cut(s)	56, 647, 739
RsaI	GTAC	1 cut(s)	534
RsaNI	GTAC	1 cut(s)	533
SaqAI	TTAA	4 cut(s)	198, 833, 882, 1036
SatI	GCNGC	5 cut(s)	186, 282, 446, 492, 729
Sau3AI	GATC	9 cut(s)	56, 103, 107, 154, 171, 208, 647, 739, 748
Sau96I	GGNCC	2 cut(s)	583, 932
SchI	GAGTC	2 cut(s)	248, 1033
SduI	GDGCHC	1 cut(s)	848
SfaNI	GCATC	2 cut(s)	118, 549
SfcI	CTRYAG	1 cut(s)	492
SinI	GGWCC	1 cut(s)	932
Sse9I	AATT	5 cut(s)	294, 572, 704, 711, 966
SsiI	CCGC	3 cut(s)	476, 556, 638
StyI	CCWWGG	3 cut(s)	48, 612, 935
TaqI	TCGA	2 cut(s)	106, 313
TasI	AATT	5 cut(s)	294, 572, 704, 711, 966
TfiI	GAWTC	1 cut(s)	1000
Tru1I	TTAA	4 cut(s)	198, 833, 882, 1036
Tru9I	TTAA	4 cut(s)	198, 833, 882, 1036
TscAI	CASTG	1 cut(s)	796
TseFI	GTSAC	3 cut(s)	80, 787, 1025
TseI	GCWGC	5 cut(s)	185, 281, 445, 491, 728
Tsp45I	GTSAC	3 cut(s)	80, 787, 1025
TspDTI	ATGAA	3 cut(s)	441, 507, 897
TspRI	CASTG	1 cut(s)	796
VpaK11BI	GGWCC	1 cut(s)	932
VspI	ATTAAT	1 cut(s)	833
XceI	RCATGY	1 cut(s)	634
XcmI	CCANNNNNNNNNTGG	1 cut(s)	942

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.