Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009217

Physical Location & Seq

Genomic Coordinates Forward (+)

16616988 .. 16622049

Gene Structure 5062 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G43850.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2634 bp

ATGGTACCATCAGAGCCGCCTAATCCTGTTGGGGGTGGTGAAAATGTTCCGCCTTCGATATTAGGAGGACAAGGAGGAGCTCCTCTTCCTTCTCAACCAGCATTTCCTTCACTTGTCTCTCCGCGTACTCAGTTTGGTAACAATATGAGTATGAGTATGCTTGGGAATGCTCCAAATATATCTTCTCTTCTCAATAATCAGTCTTTTGTAAATGGTATCCCTGGTTCTATGATTTCTATGGATACAAGTGGTGCTGAGTCTGACCCGATGTCTAACGTCGGGTTTAGTGGTTTGTCGTCTTTTAATGCGTCGAGTATGGTGTCTCCGCGCTCATCAGGTCAAGTTCAGGGTCAGCAGTTTTCGAATGTTTCGGCTAACCAGTTGTTGGCTGAGCAACAACGGAATAAGAAAATGGAGACGCAGAGTTTTCAACATGGTCAGCAGCAGTCAATGCAGCAGCAGTTTTCGACAGTGCGTGGTGGTGGATTAGCAGGTGTGGGACCTGTTAAGATGGAGCCTGGTCAGGTTTCGAATGATCAGCAGCATGGTCAAGTACAACAGCAGCAACAGAAAATGTTGAGAAACCTAGGGTCAGTTAAGTTGGAACCGCAGCAAATTCAGGCCATGAGAAATTTGGCCCAAGTGAAAATGGAACCTCAACATTCTGAGCAGTCATTGTTTCTCCAACAACAGCAGAGGCAACAACAGCAACAACAACAACAACAATTTCTTCAAATGCCGGGGCAATCTCCGCAGGCTCAAATGAACATATTTCAGCAGCAGAGACTTATGCAACTTCAACAACAGCAACTCTTGAAATCTATGCCTCAACAGCGTCCTCAATTACCACAGCAGTTCCAACAGCAGAATTTACCTCTAAGGCCACCTCTGAAACCAGTGTATGAACCTGGCATGGGTGCTCAGCGTCTTACACAGTATATGTACAGACAACAACATAGGCCTGAAGACAATAATATCGAGTTCTGGAGAAAATTTGTAGCTGAGTACTTTGCTCCTAATGCCAAAAAGAGATGGTGCGTCTCTATGTATGGCAGTGGCAGGCAAACAACAGGCGTTTTCCCTCAGGATGTGTGGCACTGTGAGATATGTAACCGAAAGCCTGGACGTGGTTTTGAGGCAACCGCCGAAGTCCTTCCGCGGCTGTTTAAGATTAAGTATGAGAGTGGGACGTTAGAAGAACTGTTATATGTAGATATGCCAAGGGAGTCCCAGAATTCATCTGGCCAAATTGTCCTGGAGTATGCAAAAGCAACACAAGAGAGTGTCTTTGAGCATCTTCGGGTTGTTCGTGATGGCCAACTTCGAATAGTCTTCTCGCCAGATCTTAAGATATTCTCCTGGGAATTTTGTGCTCGGCGGCATGAAGAGCTTATTCCACGAAGACTTTTGATACCGCAGGTTAGTCAGCTTGGATCGGCAGCTCAGAAATATCAACAAGCTGCTCAAAATGCAACAACAGATTCTGCTCTTCCGGAGCTACAAAATAATTGCAATATGTTTGTTGCATCTGCTAGACAATTGGCAAAGGCCCTGGAAGTACCACTTGTGAATGATTTGGGATACACAAAGAGATATGTTCGGTGTTTGCAGATCTCAGAGGTGGTAAATAGTATGAAGGACCTGATAGATTATAGCAGAGAAACACGAACAGGACCAATCGAGAGTTTAGCCAAGTTTCCTCGGAGAACAGGCCCTTCATCTGCACTGCCTGGTCCTTCTCCTCAGCAAGCCAGCGACCAGCTTAGGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAACAGCAACAACAACAACAACAACAACAGCAGCAGCAGCAAACAGTTTCCCAGAATACAAACAGTGATCAAAGTAGTAGGCAAGTTGCACTAATGCAGGGTAATCCAAGCAATGGTGTAAATTATGCCTTTAATGCAGCCTCTGCATCCACTTCCACCAGCAGCATCGCAGGGCTCATCCACCAGAATTCAATGAAGGGAAGACATCAGAATGCTGCTTACAATCCTCCAAACAGCCCCTATGGAGGAAACTCTGTTCAGATGCAATCACCTAGTTCCTCGGGTACCATGGTGCCATCATCATCGCAGCAACAACACAACCTGCCAACATTTCAGTCTCCAACATCCTCATCTAATAACAATAATCCCTCTCAAAACGGGATACCATCTGTTAATCACATGGGTTCCACAAACTCACCAGCAATGCAACAGGCAGGTGAGGTTGATGGAAACGAGTCTAGCTCGGTGCAGAAGATACTGAATGAAATCCTGATGAACAACCAAGCTCATAATAATAGCTCAGGAGGAAGCATGGTTGGGCATGGGTCTTTCGGGAATGATGGGAAGGGTCAAGCTAATGTAAATAGTTCTGGTGTTTTACTGATGAATGGCCAAGTGAACAACAACAACAACACAAATATTGGAGGTGCTGGTGGGTTTGGTGGTGGGATTGGTCAATCCATGGCAGCAAACGGAATCAATAATATAAACGGTAACAATAGTCTCATGAACGGAAGAGTTGGGATGATGGTGCGGGATCCAAACGGTCAACAGGATTTAGGAAACCAACTTTTAGGAGCAGTGAATGGTTTCAACAATTTTGATTGGAACGCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001666 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0006950 GO:0006974 GO:0006979 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009624 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009909 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010154 GO:0010243 GO:0010272 GO:0014070 GO:0022414 GO:0032501 GO:0032502 GO:0033554 GO:0035670 GO:0036293 GO:0042221 GO:0042493 GO:0043207 GO:0046677 GO:0046898 GO:0046982 GO:0046983 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048580 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060090 GO:0060992 GO:0061458 GO:0065007 GO:0070482 GO:0071216 GO:0071217 GO:0071496 GO:0090567 GO:0097159 GO:0097305 GO:0099402 GO:1901363 GO:1901654 GO:1901698 GO:1901700 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LIM_bind

Protein Analysis

877

Amino Acids

96.23

Weight (kDa)

9.2

Isoelectric Point (pI)

65.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LIM_bind	PF01803	309 - 563	1.1e-68	LIM-domain binding protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0009217)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G43850 AT1G43850
fragaria_vesca	FvH4_2g14890
malus_domestica	MD05G1012000.v1.1 MD10G1012000.v1.1
prunus_persica	Prupe.8G017000_v2.0.a1 Prupe.8G017000_v2.0.a1 Prupe.8G017000_v2.0.a1
pyrus_communis	pycom05g00700 pycom10g00760
rosa_chinensis	RchiOBHm_Chr6g0277461
rosa_laevigata	RLG00000013299
rosa_multiflora	Rmu_co8465657.1_g000001 Rmu_sc0003910.1_g000012
rosa_roxburghii	Rroxscaffold_7G00191290
rosa_rugosa	Rorug06G0108400 Rorug06G0108500
rosa_samantha	Rh6AG219300 Rh6BG223200 Rh6CG225700 Rh6DG216000
rosa_wichuraiana	Rw6G019200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	482, 2222
Acc36I	ACCTGC	4 cut(s)	482, 1408, 2127, 2222
Acc65I	GGTACC	2 cut(s)	4, 2081
AccB1I	GGYRCC	3 cut(s)	4, 2081, 2089
AccB7I	CCANNNNNTGG	2 cut(s)	385, 1910
AccII	CGCG	4 cut(s)	124, 328, 1159, 2630
AccIII	TCCGGA	1 cut(s)	1492
AclWI	GGATC	3 cut(s)	1441, 2549, 2562
AcoI	YGGCCR	3 cut(s)	1243, 1315, 2407
AcsI	RAATTY	7 cut(s)	615, 631, 868, 992, 1234, 1364, 1984
AcuI	CTGAAG	1 cut(s)	984
AfaI	GTAC	7 cut(s)	6, 127, 555, 944, 1007, 1560, 2083
AfiI	CCNNNNNNNGG	6 cut(s)	32, 385, 914, 1127, 1910, 2042
AflII	CTTAAG	1 cut(s)	1346
AflIII	ACRYGT	1 cut(s)	2628
AgsI	TTSAA	6 cut(s)	431, 734, 800, 817, 1989, 2611
AhdI	GACNNNNNGTC	1 cut(s)	268
AjiI	CACGTC	1 cut(s)	1127
AjnI	CCWGG	8 cut(s)	220, 517, 907, 1120, 1254, 1358, 1551, 1729
AjuI	GAANNNNNNNTTGG	2 cut(s)	166, 198
AloI	GAACNNNNNNTCC	2 cut(s)	2037, 2069
Alw21I	GWGCWC	3 cut(s)	82, 922, 1375
Alw26I	GTCTC	7 cut(s)	121, 327, 410, 778, 1045, 2139, 2525
AlwI	GGATC	3 cut(s)	1441, 2549, 2562
AlwNI	CAGNNNCTG	2 cut(s)	1484, 1940
Ama87I	CYCGRG	1 cut(s)	2077
Aor13HI	TCCGGA	1 cut(s)	1492
AoxI	GGCC	9 cut(s)	621, 636, 881, 959, 1243, 1315, 1548, 1711, 2407
ApoI	RAATTY	7 cut(s)	615, 631, 868, 992, 1234, 1364, 1984
Asp700I	GAANNNNTTC	3 cut(s)	45, 1152, 2606
Asp718I	GGTACC	2 cut(s)	4, 2081
AspA2I	CCTAGG	1 cut(s)	586
AspLEI	GCGC	1 cut(s)	330
AspS9I	GGNCC	7 cut(s)	500, 637, 1549, 1639, 1673, 1712, 1733
AsuC2I	CCSGG	1 cut(s)	741
AsuHPI	GGTGA	4 cut(s)	50, 2058, 2205, 2246
AsuII	TTCGAA	3 cut(s)	362, 530, 1324
AvaI	CYCGRG	1 cut(s)	2077
AvaII	GGWCC	4 cut(s)	500, 1639, 1673, 1733
AvrII	CCTAGG	1 cut(s)	586
AxyI	CCTNAGG	1 cut(s)	1083
BaeI	ACNNNNGTAYC	2 cut(s)	2073, 2106
BalI	TGGCCA	3 cut(s)	1245, 1317, 2409
BamHI	GGATCC	1 cut(s)	2554
BanI	GGYRCC	3 cut(s)	4, 2081, 2089
BanII	GRGCYC	2 cut(s)	82, 1974
BbsI	GAAGAC	4 cut(s)	972, 1324, 1408, 2005
Bbv12I	GWGCWC	3 cut(s)	82, 922, 1375
BbvCI	CCTCAGC	1 cut(s)	1743
BccI	CCATC	9 cut(s)	16, 505, 1026, 1307, 2101, 2191, 2237, 2351, 2539
BciT130I	CCWGG	8 cut(s)	222, 519, 909, 1122, 1256, 1360, 1553, 1731
BciVI	GTATCC	4 cut(s)	227, 235, 1574, 2172
BclI	TGATCA	2 cut(s)	535, 1864
BcnI	CCSGG	1 cut(s)	741
BcoDI	GTCTC	7 cut(s)	121, 327, 410, 778, 1045, 2139, 2525
BfaI	CTAG	4 cut(s)	587, 1533, 2070, 2256
BfrI	CTTAAG	1 cut(s)	1346
BfuAI	ACCTGC	4 cut(s)	482, 1408, 2127, 2222
BfuI	GTATCC	4 cut(s)	227, 235, 1574, 2172
BglII	AGATCT	2 cut(s)	1342, 1611
BlnI	CCTAGG	1 cut(s)	586
BlpI	GCTNAGC	2 cut(s)	390, 921
BmcAI	AGTACT	1 cut(s)	1007
Bme1390I	CCNGG	9 cut(s)	222, 519, 741, 909, 1122, 1256, 1360, 1553, 1731
Bme18I	GGWCC	4 cut(s)	500, 1639, 1673, 1733
BmeRI	GACNNNNNGTC	1 cut(s)	268
BmeT110I	CYCGRG	1 cut(s)	2077
BmgBI	CACGTC	1 cut(s)	1127
BmgT120I	GGNCC	7 cut(s)	500, 637, 1549, 1639, 1673, 1712, 1733
BmiI	GGNNCC	9 cut(s)	6, 501, 516, 606, 654, 2083, 2091, 2203, 2556
BmrFI	CCNGG	9 cut(s)	222, 519, 741, 909, 1122, 1256, 1360, 1553, 1731
BmsI	GCATC	5 cut(s)	1303, 1535, 1952, 1971, 2049
BpiI	GAAGAC	4 cut(s)	972, 1324, 1408, 2005
BplI	GAGNNNNNCTC	2 cut(s)	2243, 2275
BpmI	CTGGAG	2 cut(s)	1006, 1277
Bpu10I	CCTNAGC	3 cut(s)	1743, 1763, 2317
Bpu1102I	GCTNAGC	2 cut(s)	390, 921
Bpu14I	TTCGAA	3 cut(s)	362, 530, 1324
BpuMI	CCSGG	1 cut(s)	741
BsaWI	WCCGGW	1 cut(s)	1492
Bsc4I	CCNNNNNNNGG	6 cut(s)	32, 385, 914, 1127, 1910, 2042
Bse1I	ACTGG	2 cut(s)	379, 896
Bse21I	CCTNAGG	1 cut(s)	1083
Bse3DI	GCAATG	2 cut(s)	1915, 2226
BseAI	TCCGGA	1 cut(s)	1492
BseBI	CCWGG	8 cut(s)	222, 519, 909, 1122, 1256, 1360, 1553, 1731
BseGI	GGATG	5 cut(s)	1093, 1943, 1974, 2141, 2547
BseLI	CCNNNNNNNGG	6 cut(s)	32, 385, 914, 1127, 1910, 2042
BseMI	GCAATG	2 cut(s)	1915, 2226
BseNI	ACTGG	2 cut(s)	379, 896
BseRI	GAGGAG	3 cut(s)	72, 90, 1731
BsgI	GTGCAG	2 cut(s)	1707, 2285
Bsh1236I	CGCG	4 cut(s)	124, 328, 1159, 2630
BshFI	GGCC	9 cut(s)	623, 638, 883, 961, 1245, 1317, 1550, 1713, 2409
BshNI	GGYRCC	3 cut(s)	4, 2081, 2089
BsiHKAI	GWGCWC	3 cut(s)	82, 922, 1375
BsiHKCI	CYCGRG	1 cut(s)	2077
BsiSI	CCGG	2 cut(s)	740, 1493
BslFI	GGGAC	3 cut(s)	513, 1201, 1213
BslI	CCNNNNNNNGG	6 cut(s)	32, 385, 914, 1127, 1910, 2042
BsmAI	GTCTC	7 cut(s)	121, 327, 410, 778, 1045, 2139, 2525
BsmBI	CGTCTC	2 cut(s)	410, 1045
BsmFI	GGGAC	3 cut(s)	513, 1201, 1213
BsmI	GAATGC	2 cut(s)	172, 2014
BsnI	GGCC	9 cut(s)	623, 638, 883, 961, 1245, 1317, 1550, 1713, 2409
BsoBI	CYCGRG	1 cut(s)	2077
Bsp119I	TTCGAA	3 cut(s)	362, 530, 1324
Bsp1286I	GDGCHC	4 cut(s)	82, 922, 1375, 1974
Bsp13I	TCCGGA	1 cut(s)	1492
Bsp1407I	TGTACA	1 cut(s)	942
Bsp143I	GATC	6 cut(s)	535, 1342, 1433, 1611, 1864, 2554
Bsp1720I	GCTNAGC	2 cut(s)	390, 921
Bsp19I	CCATGG	2 cut(s)	2085, 2478
BspANI	GGCC	9 cut(s)	623, 638, 883, 961, 1245, 1317, 1550, 1713, 2409
BspEI	TCCGGA	1 cut(s)	1492
BspFNI	CGCG	4 cut(s)	124, 328, 1159, 2630
BspHI	TCATGA	1 cut(s)	2523
BspLI	GGNNCC	9 cut(s)	6, 501, 516, 606, 654, 2083, 2091, 2203, 2556
BspMI	ACCTGC	4 cut(s)	482, 1408, 2127, 2222
BspPI	GGATC	3 cut(s)	1441, 2549, 2562
BspQI	GCTCTTC	2 cut(s)	1380, 1494
BspT104I	TTCGAA	3 cut(s)	362, 530, 1324
BspT107I	GGYRCC	3 cut(s)	4, 2081, 2089
BspTI	CTTAAG	1 cut(s)	1346
BsrDI	GCAATG	2 cut(s)	1915, 2226
BsrGI	TGTACA	1 cut(s)	942
BsrI	ACTGG	2 cut(s)	379, 896
BssMI	GATC	6 cut(s)	535, 1342, 1433, 1611, 1864, 2554
BssT1I	CCWWGG	4 cut(s)	586, 1220, 2085, 2478
Bst2UI	CCWGG	8 cut(s)	222, 519, 909, 1122, 1256, 1360, 1553, 1731
Bst4CI	ACNGT	8 cut(s)	472, 936, 1100, 1203, 1843, 1862, 2510, 2564
Bst6I	CTCTTC	5 cut(s)	90, 192, 1380, 1494, 2527
BstAFI	CTTAAG	1 cut(s)	1346
BstAPI	GCANNNNNTGC	2 cut(s)	451, 1940
BstAUI	TGTACA	1 cut(s)	942
BstBI	TTCGAA	3 cut(s)	362, 530, 1324
BstC8I	GCNNGC	4 cut(s)	756, 1061, 1749, 1753
BstDSI	CCRYGG	3 cut(s)	1157, 2085, 2478
BstF5I	GGATG	5 cut(s)	1093, 1943, 1974, 2141, 2547
BstFNI	CGCG	4 cut(s)	124, 328, 1159, 2630
BstHHI	GCGC	1 cut(s)	330
BstKTI	GATC	6 cut(s)	538, 1345, 1436, 1614, 1867, 2557
BstMAI	GTCTC	7 cut(s)	121, 327, 410, 778, 1045, 2139, 2525
BstMBI	GATC	6 cut(s)	535, 1342, 1433, 1611, 1864, 2554
BstNI	CCWGG	8 cut(s)	222, 519, 909, 1122, 1256, 1360, 1553, 1731
BstSCI	CCNGG	9 cut(s)	220, 517, 739, 907, 1120, 1254, 1358, 1551, 1729
BstUI	CGCG	4 cut(s)	124, 328, 1159, 2630
BstV2I	GAAGAC	4 cut(s)	972, 1324, 1408, 2005
BstX2I	RGATCY	3 cut(s)	1342, 1611, 2554
BstYI	RGATCY	3 cut(s)	1342, 1611, 2554
Bsu36I	CCTNAGG	1 cut(s)	1083
BsuI	GTATCC	4 cut(s)	227, 235, 1574, 2172
BsuRI	GGCC	9 cut(s)	623, 638, 883, 961, 1245, 1317, 1550, 1713, 2409
BtgI	CCRYGG	3 cut(s)	1157, 2085, 2478
BtgZI	GCGATG	2 cut(s)	1948, 2085
BtrI	CACGTC	1 cut(s)	1127
BtsCI	GGATG	5 cut(s)	1093, 1943, 1974, 2141, 2547
BtsI	GCAGTG	3 cut(s)	1060, 1724, 2604
BtsIMutI	CAGTG	7 cut(s)	477, 903, 1060, 1096, 1724, 1867, 2604
BveI	ACCTGC	4 cut(s)	482, 1408, 2127, 2222
Cac8I	GCNNGC	4 cut(s)	756, 1061, 1749, 1753
CaiI	CAGNNNCTG	2 cut(s)	1484, 1940
CciI	TCATGA	1 cut(s)	2523
CfoI	GCGC	1 cut(s)	330
Cfr13I	GGNCC	7 cut(s)	500, 637, 1549, 1639, 1673, 1712, 1733
Cfr42I	CCGCGG	1 cut(s)	1160
CseI	GACGC	5 cut(s)	297, 427, 824, 914, 1027
Csp6I	GTAC	7 cut(s)	5, 126, 554, 943, 1006, 1559, 2082
CviQI	GTAC	7 cut(s)	5, 126, 554, 943, 1006, 1559, 2082
DpnI	GATC	6 cut(s)	537, 1344, 1435, 1613, 1866, 2556
DpnII	GATC	6 cut(s)	535, 1342, 1433, 1611, 1864, 2554
DriI	GACNNNNNGTC	1 cut(s)	268
EaeI	YGGCCR	3 cut(s)	1243, 1315, 2407
Eam1104I	CTCTTC	5 cut(s)	90, 192, 1380, 1494, 2527
Eam1105I	GACNNNNNGTC	1 cut(s)	268
EarI	CTCTTC	5 cut(s)	90, 192, 1380, 1494, 2527
EciI	GGCGGA	1 cut(s)	39
Ecl136II	GAGCTC	1 cut(s)	80
Eco130I	CCWWGG	4 cut(s)	586, 1220, 2085, 2478
Eco147I	AGGCCT	1 cut(s)	961
Eco24I	GRGCYC	2 cut(s)	82, 1974
Eco47I	GGWCC	4 cut(s)	500, 1639, 1673, 1733
Eco53kI	GAGCTC	1 cut(s)	80
Eco57I	CTGAAG	1 cut(s)	984
Eco81I	CCTNAGG	1 cut(s)	1083
Eco88I	CYCGRG	1 cut(s)	2077
EcoICRI	GAGCTC	1 cut(s)	80
EcoO109I	RGGNCCY	4 cut(s)	500, 1549, 1639, 1712
EcoRI	GAATTC	2 cut(s)	1234, 1984
EcoRII	CCWGG	8 cut(s)	220, 517, 907, 1120, 1254, 1358, 1551, 1729
EcoT14I	CCWWGG	4 cut(s)	586, 1220, 2085, 2478
EcoT38I	GRGCYC	2 cut(s)	82, 1974
ErhI	CCWWGG	4 cut(s)	586, 1220, 2085, 2478
Esp3I	CGTCTC	2 cut(s)	410, 1045
FalI	AAGNNNNNCTT	2 cut(s)	1548, 1580
FaqI	GGGAC	3 cut(s)	513, 1201, 1213
FauI	CCCGC	1 cut(s)	2544
FbaI	TGATCA	2 cut(s)	535, 1864
FokI	GGATG	5 cut(s)	1100, 1930, 1961, 2128, 2554
FriOI	GRGCYC	2 cut(s)	82, 1974
FspBI	CTAG	4 cut(s)	587, 1533, 2070, 2256
GlaI	GCGC	1 cut(s)	329
GsuI	CTGGAG	2 cut(s)	1006, 1277
HaeIII	GGCC	9 cut(s)	623, 638, 883, 961, 1245, 1317, 1550, 1713, 2409
HapII	CCGG	2 cut(s)	740, 1493
HgaI	GACGC	5 cut(s)	297, 427, 824, 914, 1027
HhaI	GCGC	1 cut(s)	330
Hin6I	GCGC	1 cut(s)	328
HinP1I	GCGC	1 cut(s)	328
HincII	GTYRAC	1 cut(s)	2567
HindII	GTYRAC	1 cut(s)	2567
HinfI	GANTC	5 cut(s)	257, 1226, 1481, 2252, 2493
HpaII	CCGG	2 cut(s)	740, 1493
HphI	GGTGA	4 cut(s)	50, 2058, 2205, 2246
Hpy166II	GTNNAC	2 cut(s)	2416, 2567
Hpy188I	TCNGA	9 cut(s)	13, 262, 667, 891, 1446, 1618, 1704, 2007, 2058
Hpy8I	GTNNAC	2 cut(s)	2416, 2567
Hpy99I	CGWCG	2 cut(s)	281, 313
HpyAV	CCTTC	9 cut(s)	63, 99, 117, 1163, 1630, 1725, 1746, 1987, 2356
HpyCH4III	ACNGT	8 cut(s)	472, 936, 1100, 1203, 1843, 1862, 2510, 2564
HpyCH4IV	ACGT	3 cut(s)	276, 1126, 1190
HpySE526I	ACGT	3 cut(s)	276, 1126, 1190
HspAI	GCGC	1 cut(s)	328
Kpn2I	TCCGGA	1 cut(s)	1492
KpnI	GGTACC	2 cut(s)	8, 2085
Ksp22I	TGATCA	2 cut(s)	535, 1864
KspI	CCGCGG	1 cut(s)	1160
Kzo9I	GATC	6 cut(s)	535, 1342, 1433, 1611, 1864, 2554
LguI	GCTCTTC	2 cut(s)	1380, 1494
LmnI	GCTCC	7 cut(s)	77, 85, 175, 514, 1018, 1495, 2594
LweI	GCATC	5 cut(s)	1303, 1535, 1952, 1971, 2049
MaeI	CTAG	4 cut(s)	587, 1533, 2070, 2256
MaeII	ACGT	3 cut(s)	276, 1126, 1190
MaeIII	GTNAC	3 cut(s)	137, 1109, 2510
MalI	GATC	6 cut(s)	537, 1344, 1435, 1613, 1866, 2556
MboI	GATC	6 cut(s)	535, 1342, 1433, 1611, 1864, 2554
MfeI	CAATTG	1 cut(s)	1538
MflI	RGATCY	3 cut(s)	1342, 1611, 2554
MhlI	GDGCHC	4 cut(s)	82, 922, 1375, 1974
MlsI	TGGCCA	3 cut(s)	1245, 1317, 2409
MluI	ACGCGT	1 cut(s)	2628
MluNI	TGGCCA	3 cut(s)	1245, 1317, 2409
MlyI	GAGTC	3 cut(s)	266, 1235, 2261
MmeI	TCCRAC	4 cut(s)	582, 709, 883, 2162
Mox20I	TGGCCA	3 cut(s)	1245, 1317, 2409
MroI	TCCGGA	1 cut(s)	1492
MroXI	GAANNNNTTC	3 cut(s)	45, 1152, 2606
MscI	TGGCCA	3 cut(s)	1245, 1317, 2409
MseI	TTAA	8 cut(s)	303, 507, 597, 1167, 1173, 1347, 1929, 2190
MslI	CAYNNNNRTG	1 cut(s)	2007
Msp20I	TGGCCA	3 cut(s)	1245, 1317, 2409
MspA1I	CMGCKG	1 cut(s)	1159
MspCI	CTTAAG	1 cut(s)	1346
MspI	CCGG	2 cut(s)	740, 1493
MspR9I	CCNGG	9 cut(s)	222, 519, 741, 909, 1122, 1256, 1360, 1553, 1731
MunI	CAATTG	1 cut(s)	1538
Mva1269I	GAATGC	2 cut(s)	172, 2014
MvaI	CCWGG	8 cut(s)	222, 519, 909, 1122, 1256, 1360, 1553, 1731
MvnI	CGCG	4 cut(s)	124, 328, 1159, 2630
NciI	CCSGG	1 cut(s)	741
NcoI	CCATGG	2 cut(s)	2085, 2478
NdeII	GATC	6 cut(s)	535, 1342, 1433, 1611, 1864, 2554
NlaIV	GGNNCC	9 cut(s)	6, 501, 516, 606, 654, 2083, 2091, 2203, 2556
NmeAIII	GCCGAG	1 cut(s)	1354
NspV	TTCGAA	3 cut(s)	362, 530, 1324
PagI	TCATGA	1 cut(s)	2523
PaqCI	CACCTGC	2 cut(s)	482, 2222
PceI	AGGCCT	1 cut(s)	961
PciSI	GCTCTTC	2 cut(s)	1380, 1494
PcsI	WCGNNNNNNNCGW	1 cut(s)	1306
PctI	GAATGC	2 cut(s)	172, 2014
PdmI	GAANNNNTTC	3 cut(s)	45, 1152, 2606
PfeI	GAWTC	2 cut(s)	1481, 2493
PflMI	CCANNNNNTGG	2 cut(s)	385, 1910
PfoI	TCCNGGA	1 cut(s)	1254
PleI	GAGTC	3 cut(s)	265, 1234, 2260
PpsI	GAGTC	3 cut(s)	265, 1234, 2260
PpuMI	RGGWCCY	2 cut(s)	500, 1639
Psp124BI	GAGCTC	1 cut(s)	82
Psp5II	RGGWCCY	2 cut(s)	500, 1639
Psp6I	CCWGG	8 cut(s)	220, 517, 907, 1120, 1254, 1358, 1551, 1729
PspGI	CCWGG	8 cut(s)	220, 517, 907, 1120, 1254, 1358, 1551, 1729
PspN4I	GGNNCC	9 cut(s)	6, 501, 516, 606, 654, 2083, 2091, 2203, 2556
PspPI	GGNCC	7 cut(s)	500, 637, 1549, 1639, 1673, 1712, 1733
PspPPI	RGGWCCY	2 cut(s)	500, 1639
PsrI	GAACNNNNNNTAC	2 cut(s)	208, 240
PstNI	CAGNNNCTG	2 cut(s)	1484, 1940
PsuI	RGATCY	3 cut(s)	1342, 1611, 2554
RsaI	GTAC	7 cut(s)	6, 127, 555, 944, 1007, 1560, 2083
RsaNI	GTAC	7 cut(s)	5, 126, 554, 943, 1006, 1559, 2082
RseI	CAYNNNNRTG	1 cut(s)	2007
SacI	GAGCTC	1 cut(s)	82
SacII	CCGCGG	1 cut(s)	1160
SapI	GCTCTTC	2 cut(s)	1380, 1494
SaqAI	TTAA	8 cut(s)	303, 507, 597, 1167, 1173, 1347, 1929, 2190
Sau3AI	GATC	6 cut(s)	535, 1342, 1433, 1611, 1864, 2554
Sau96I	GGNCC	7 cut(s)	500, 637, 1549, 1639, 1673, 1712, 1733
ScaI	AGTACT	1 cut(s)	1007
SchI	GAGTC	3 cut(s)	266, 1235, 2261
ScrFI	CCNGG	9 cut(s)	222, 519, 741, 909, 1122, 1256, 1360, 1553, 1731
SduI	GDGCHC	4 cut(s)	82, 922, 1375, 1974
SfaNI	GCATC	5 cut(s)	1303, 1535, 1952, 1971, 2049
Sfr303I	CCGCGG	1 cut(s)	1160
SfuI	TTCGAA	3 cut(s)	362, 530, 1324
SgrBI	CCGCGG	1 cut(s)	1160
SinI	GGWCC	4 cut(s)	500, 1639, 1673, 1733
SmiMI	CAYNNNNRTG	1 cut(s)	2007
SmlI	CTYRAG	1 cut(s)	1346
SmoI	CTYRAG	1 cut(s)	1346
SseBI	AGGCCT	1 cut(s)	961
SspI	AATATT	1 cut(s)	2437
SspMI	CTAG	4 cut(s)	587, 1533, 2070, 2256
SstI	GAGCTC	1 cut(s)	82
StuI	AGGCCT	1 cut(s)	961
StyD4I	CCNGG	9 cut(s)	220, 517, 739, 907, 1120, 1254, 1358, 1551, 1729
StyI	CCWWGG	4 cut(s)	586, 1220, 2085, 2478
TaaI	ACNGT	8 cut(s)	472, 936, 1100, 1203, 1843, 1862, 2510, 2564
TaiI	ACGT	3 cut(s)	279, 1129, 1193
TaqI	TCGA	8 cut(s)	56, 311, 362, 467, 530, 978, 1324, 1680
TatI	WGTACW	3 cut(s)	553, 942, 1005
TauI	GCSGC	3 cut(s)	19, 1162, 1381
TfiI	GAWTC	2 cut(s)	1481, 2493
Tru1I	TTAA	8 cut(s)	303, 507, 597, 1167, 1173, 1347, 1929, 2190
Tru9I	TTAA	8 cut(s)	303, 507, 597, 1167, 1173, 1347, 1929, 2190
TscAI	CASTG	7 cut(s)	477, 903, 1060, 1103, 1731, 1867, 2604
TspGWI	ACGGA	3 cut(s)	415, 2505, 2544
TspRI	CASTG	7 cut(s)	477, 903, 1060, 1103, 1731, 1867, 2604
Van91I	CCANNNNNTGG	2 cut(s)	385, 1910
Vha464I	CTTAAG	1 cut(s)	1346
VpaK11BI	GGWCC	4 cut(s)	500, 1639, 1673, 1733
XapI	RAATTY	7 cut(s)	615, 631, 868, 992, 1234, 1364, 1984
XcmI	CCANNNNNNNNNTGG	2 cut(s)	631, 1238
XmaJI	CCTAGG	1 cut(s)	586
XmnI	GAANNNNTTC	3 cut(s)	45, 1152, 2606
XspI	CTAG	4 cut(s)	587, 1533, 2070, 2256
ZrmI	AGTACT	1 cut(s)	1007

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.