Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0009217

Physical Location & Seq

Genomic Coordinates Reverse (-)

1575215 .. 1584769

Gene Structure 9555 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G017000.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2763 bp

ATGGTACCTTCGGGGCCGCCCACTCCAATTGGTGGTGCCCAGTCTGTTTCACCTTCACTCTTGCGTACGAATTCTGGAATGCTGGGAGGTCAAGGTGGTTCACTACCTTCCCAGTCAGGTTTTCCCCCGCTTGTCTCACCACGTAATCAATATGGTAACATGAATATGCTTGGCAATGTAACCAACGTGTCTTCTCTCCTTAATCAGTCTTATGGAAATGGGATTCCAAATTCGGGGCTTTCTGGTCCTGGTAGCAGCCAACGTGGGGGTATGGATACCGGTGCTGAATCAGATCCACTTTCTAATGTTGGCAATGGAATGGGTTTTAGTGCGCCTTCTTCGTCATATGTTGCATCAAACATGGCTAATCCTGGTACATCTGGTCAAGGTCAGGGCCAACAATTTTCAAACCCTTCTGGTAACCAACTATTGACAGATCAACAGCAGCAGCAACTTGAAACACATAATTTCCAGCATGGTCAGCAGCCAATGCAACAGTTCTCTGCCCCTCACAACACACAGCAGCAGCAACATCAATTTCAGGCTATTCGAGGAGGCTTAGCTGGTGTTGGACCAGTCAAGTTGGAGCCCCAATTGACAAATGATCAACATGGACAGCAGCAGCAGCAGCAGCAGTTGCAGTCTTTGAGGAGTCTTGGTCCAGTGAAATTGGAACCCCAACAACTTCAGACCATGAGAAGCTTGCCACCTGTAAAATTGGAACCGCAGAATTCTGATCAGTCATTGTTTTTGCATCAACAGCAGCAACAACAGCAACAACAGCAGCAACAGCAGCAACAACAACAGTTCCTCCACATGTCAAGGCCGTCTTCTCAGGCTGCTGCTGCACAGATTAACATTTTGCATCAACAGAGATTCTTGCAGCTACAACAACAACACCAGCAACAGCAACTCTTGAAAGCAATGCCTCAGCAACGCCCCCAATTACAGCAACAGTTTCCACAGCAGAATCTGCCTATGAGGTCTCCTGCGAAACCGGTATATGAGCCTGGAATGTGTGCTCGGCGTTTGACACATTATATGTATCAGCAACAACATAGGCCTGAAGACAATAATATTGAGTTTTGGAGAAAATTTGTTGCTGAGTATTTTGTACCTCATGCCAAGAAGAAGTGGTGTGTTTCTATGTATGGAACTGGTCGGCAAACAACTGGCGTTTTTCCTCAGGATGTGTGGCATTGTGAGATATGCAATCGCAAGCCTGGACGTGGCTTTGAAGCGACTGTTGAGGTGCTTCCCAGGCTTTTTAAAATCAAGTATGAAAGTGGTACTTTGGAGGAGCTTCTTTATGTTGATATGCCACGCGAATATCATAATTCATCTGGTCAGATTGTACTGGACTATGCTAAAGCAATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGGGATGGTCAACTTCGGATTGTATTCTCTCCAGATCTAAAGATATGCTCTTGGGAATTTTGTGCAAGGCGCCATGAAGAGCTTATCCCGCGAAGATTACTGATACCTCAGGTTAGTCAGCTTGGTGCTGCAGCTCAGAAATACCAGGCTGCTACTCAAAATGCATCATCCAATTTATCTCTTCCAGAGATACAAAATAATTGCAATATGTTTGTATCATCAGCTCGGCAGTTAGCGAAAACCTTGGAAGTGCCATTAGTAAATGATTTAGGTTATACAAAGAGATATGTAAGGTGTCTTCAGATTTCAGAAGTGGTTAATAGTATGAAAGACTTGATTGATTACAGCCGAGAGACAGGGACTGGACCTATGGAGAGCTTGGCCAAGTTTCCTCGAAGGACGAGTGCTTCATCTGGGTTTCACGGTCAAACACAACAGTCCGAGGAGCAAATGCAGCAGCAGCAACAGCAACAACAGCAACAACAACCGATGGGCCAGAATCCAAACTCCGATCCAAGCTCTGTCCAGGCCACGACTATGCAACTTGCTGCCAGTAATGGTATGGCTAGTGTAAATAATGTTCTGAACGCAGCATCCACCTCTACCTCTGCAAGCACCATTGTTGGGCTCCTCCATCAAAATTCCATGAATTCCAGACAGCAAAGCTCAATGAATAATGCAAACAGTCCCTATGGAGGAAATTCTGTTCAGATTCCATCCCCTGGTTCTTCTAGTACAATCCCACAGACGCAACCAAACCCCTCTCCATTCCAGTCACCAACACCCTCGTCAAACAATCCCTCTCAAACATCTCATTGTGCCTTGACAGCTGCCAATCACATGAGTGCAACAAATTCACCAGCAAATATATCCATGCAACAGCCAACCATTTCCGGTGAGGCTGATCCAAGCGATTCCCAGAGCTCTGTCCAGAAAATAATACACGAAATGATGATGTCCAACCAGCTGAATGGCGCGGGCAGTATGGTTGGCGTGGGTTCTCTGGGAAACGATGTGAAAAATGTTAATGGGATTTTGTCAACAAGCAACAACACAGGAATGAATGGCGGCAACTGTCTGTCAGGGAATGGCATGACTAACAGTAGTAACTCGGGTATTGGGGGTGCTGGATTTGGGAGTATGGGTGGACTTGGTCAGCCTTCCATGGGTAATGGAATAAGAAGTGCAATGGGAAATAATTCTGTTATGAATGGAAGGGTGGGAATGGCATCAATGGCTCGAGAACAAAGTATGCATCATCAACAACAGGATATGGGGAACCAGCTACTTAGTGGGCTTGGAGCGGTTAACGGCTTTAACAATCTTCAATTTGATTGGAAACATTCCCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001666 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0006950 GO:0006974 GO:0006979 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009624 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009909 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010154 GO:0010243 GO:0010272 GO:0014070 GO:0022414 GO:0032501 GO:0032502 GO:0033554 GO:0035670 GO:0036293 GO:0042221 GO:0042493 GO:0043207 GO:0046677 GO:0046898 GO:0046982 GO:0046983 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048580 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060090 GO:0060992 GO:0061458 GO:0065007 GO:0070482 GO:0071216 GO:0071217 GO:0071496 GO:0090567 GO:0097159 GO:0097305 GO:0099402 GO:1901363 GO:1901654 GO:1901698 GO:1901700 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LIM_bind

Protein Analysis

921

Amino Acids

100.15

Weight (kDa)

8.79

Isoelectric Point (pI)

60.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009217)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G43850 AT1G43850
fragaria_vesca	FvH4_2g14890
malus_domestica	MD05G1012000.v1.1 MD10G1012000.v1.1
prunus_persica	Prupe.8G017000_v2.0.a1 Prupe.8G017000_v2.0.a1 Prupe.8G017000_v2.0.a1
pyrus_communis	pycom05g00700 pycom10g00760
rosa_chinensis	RchiOBHm_Chr6g0277461
rosa_laevigata	RLG00000013299
rosa_multiflora	Rmu_co8465657.1_g000001 Rmu_sc0003910.1_g000012
rosa_roxburghii	Rroxscaffold_7G00191290
rosa_rugosa	Rorug06G0108400 Rorug06G0108500
rosa_samantha	Rh6AG219300 Rh6BG223200 Rh6CG225700 Rh6DG216000
rosa_wichuraiana	Rw6G019200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	4
AccB1I	GGYRCC	3 cut(s)	4, 35, 1479
AccB7I	CCANNNNNTGG	2 cut(s)	32, 2132
AccBSI	CCGCTC	1 cut(s)	2714
AccII	CGCG	3 cut(s)	1326, 1501, 2387
AciI	CCGC	7 cut(s)	17, 128, 725, 1499, 2387, 2478, 2714
AclWI	GGATC	3 cut(s)	287, 1916, 2309
AcoI	YGGCCR	1 cut(s)	1791
AcsI	RAATTY	9 cut(s)	70, 229, 730, 1094, 1466, 2050, 2059, 2110, 2263
AcuI	CTGAAG	3 cut(s)	671, 1086, 1694
AcyI	GRCGYC	1 cut(s)	1480
AfaI	GTAC	7 cut(s)	6, 67, 376, 1116, 1291, 1356, 2146
AfiI	CCNNNNNNNGG	8 cut(s)	32, 233, 265, 1229, 2034, 2105, 2132, 2576
AflIII	ACRYGT	2 cut(s)	186, 816
AgeI	ACCGGT	2 cut(s)	278, 997
AgsI	TTSAA	5 cut(s)	408, 458, 919, 1238, 2738
AjiI	CACGTC	1 cut(s)	1229
AjnI	CCWGG	8 cut(s)	247, 370, 1009, 1222, 1259, 1554, 1935, 2131
AleI	CACNNNNGTG	1 cut(s)	2253
AloI	GAACNNNNNNTCC	4 cut(s)	1988, 2020, 2100, 2132
Alw21I	GWGCWC	2 cut(s)	1024, 2336
Alw26I	GTCTC	3 cut(s)	139, 990, 1757
AlwI	GGATC	3 cut(s)	287, 1916, 2309
AlwNI	CAGNNNCTG	2 cut(s)	973, 1772
Ama87I	CYCGRG	2 cut(s)	2521, 2649
AoxI	GGCC	7 cut(s)	14, 394, 824, 1061, 1791, 1903, 1938
ApoI	RAATTY	9 cut(s)	70, 229, 730, 1094, 1466, 2050, 2059, 2110, 2263
AsiGI	ACCGGT	2 cut(s)	278, 997
Asp700I	GAANNNNTTC	1 cut(s)	2608
Asp718I	GGTACC	1 cut(s)	4
AspLEI	GCGC	3 cut(s)	334, 1482, 2387
AspS9I	GGNCC	7 cut(s)	14, 245, 394, 572, 659, 1775, 1903
AsuHPI	GGTGA	5 cut(s)	42, 129, 2178, 2259, 2318
AvaI	CYCGRG	2 cut(s)	2521, 2649
AvaII	GGWCC	4 cut(s)	245, 572, 659, 1775
AxyI	CCTNAGG	2 cut(s)	1185, 1518
BaeGI	GKGCMC	1 cut(s)	40
BalI	TGGCCA	1 cut(s)	1793
BanI	GGYRCC	3 cut(s)	4, 35, 1479
BanII	GRGCYC	3 cut(s)	591, 2040, 2336
BarI	GAAGNNNNNNTAC	2 cut(s)	1692, 1724
BbsI	GAAGAC	4 cut(s)	183, 822, 1074, 1700
Bbv12I	GWGCWC	2 cut(s)	1024, 2336
BbvCI	CCTCAGC	1 cut(s)	930
BccI	CCATC	4 cut(s)	1409, 1894, 2052, 2134
BceAI	ACGGC	2 cut(s)	811, 2737
BciT130I	CCWGG	8 cut(s)	249, 372, 1011, 1224, 1261, 1556, 1937, 2133
BciVI	GTATCC	1 cut(s)	268
BclI	TGATCA	2 cut(s)	604, 736
BcoDI	GTCTC	3 cut(s)	139, 990, 1757
BfaI	CTAG	2 cut(s)	1977, 2142
BfmI	CTRYAG	1 cut(s)	1539
BfoI	RGCGCY	1 cut(s)	1483
BfuI	GTATCC	1 cut(s)	268
BglII	AGATCT	1 cut(s)	1444
BlpI	GCTNAGC	1 cut(s)	559
Bme1390I	CCNGG	8 cut(s)	249, 372, 1011, 1224, 1261, 1556, 1937, 2133
Bme18I	GGWCC	4 cut(s)	245, 572, 659, 1775
BmeT110I	CYCGRG	2 cut(s)	2521, 2649
BmgBI	CACGTC	1 cut(s)	1229
BmgT120I	GGNCC	7 cut(s)	14, 245, 394, 572, 659, 1775, 1903
BmiI	GGNNCC	9 cut(s)	6, 15, 37, 588, 675, 723, 1481, 2039, 2690
BmrFI	CCNGG	8 cut(s)	249, 372, 1011, 1224, 1261, 1556, 1937, 2133
BmrI	ACTGGG	2 cut(s)	34, 106
BmsI	GCATC	7 cut(s)	362, 763, 874, 1583, 2012, 2648, 2674
BmuI	ACTGGG	2 cut(s)	34, 106
BpiI	GAAGAC	4 cut(s)	183, 822, 1074, 1700
BpmI	CTGGAG	1 cut(s)	1425
Bpu10I	CCTNAGC	1 cut(s)	930
Bpu1102I	GCTNAGC	1 cut(s)	559
BsaAI	YACGTR	1 cut(s)	143
BsaHI	GRCGYC	1 cut(s)	1480
BsaI	GGTCTC	1 cut(s)	990
BsaJI	CCNNGG	5 cut(s)	1259, 1653, 1851, 2131, 2574
BsaWI	WCCGGW	3 cut(s)	278, 997, 2303
BsaXI	ACNNNNNCTCC	6 cut(s)	643, 673, 795, 825, 2539, 2569
Bsc4I	CCNNNNNNNGG	8 cut(s)	32, 233, 265, 1229, 2034, 2105, 2132, 2576
Bse118I	RCCGGY	2 cut(s)	278, 997
Bse21I	CCTNAGG	2 cut(s)	1185, 1518
Bse3DI	GCAATG	4 cut(s)	181, 319, 930, 2604
BseBI	CCWGG	8 cut(s)	249, 372, 1011, 1224, 1261, 1556, 1937, 2133
BseDI	CCNNGG	5 cut(s)	1259, 1653, 1851, 2131, 2574
BseGI	GGATG	5 cut(s)	1195, 1420, 1577, 2003, 2126
BseLI	CCNNNNNNNGG	8 cut(s)	32, 233, 265, 1229, 2034, 2105, 2132, 2576
BseMI	GCAATG	4 cut(s)	181, 319, 930, 2604
BseMII	CTCAG	6 cut(s)	848, 944, 1095, 1199, 1532, 1559
BseRI	GAGGAG	5 cut(s)	567, 664, 1313, 1868, 2030
BseSI	GKGCMC	1 cut(s)	40
BseYI	CCCAGC	1 cut(s)	82
BsgI	GTGCAG	1 cut(s)	831
Bsh1236I	CGCG	3 cut(s)	1326, 1501, 2387
BshFI	GGCC	7 cut(s)	16, 396, 826, 1063, 1793, 1905, 1940
BshNI	GGYRCC	3 cut(s)	4, 35, 1479
BshTI	ACCGGT	2 cut(s)	278, 997
BsiHKAI	GWGCWC	2 cut(s)	1024, 2336
BsiHKCI	CYCGRG	2 cut(s)	2521, 2649
BsiSI	CCGG	3 cut(s)	279, 998, 2304
BsiWI	CGTACG	1 cut(s)	65
BslFI	GGGAC	2 cut(s)	1783, 2082
BslI	CCNNNNNNNGG	8 cut(s)	32, 233, 265, 1229, 2034, 2105, 2132, 2576
BsmAI	GTCTC	3 cut(s)	139, 990, 1757
BsmFI	GGGAC	2 cut(s)	1783, 2082
BsmI	GAATGC	1 cut(s)	84
BsnI	GGCC	7 cut(s)	16, 396, 826, 1063, 1793, 1905, 1940
Bso31I	GGTCTC	1 cut(s)	990
BsoBI	CYCGRG	2 cut(s)	2521, 2649
Bsp1286I	GDGCHC	5 cut(s)	40, 591, 1024, 2040, 2336
Bsp143I	GATC	7 cut(s)	292, 436, 604, 736, 1444, 1921, 2314
Bsp1720I	GCTNAGC	1 cut(s)	559
Bsp19I	CCATGG	1 cut(s)	2574
BspACI	CCGC	7 cut(s)	17, 128, 725, 1499, 2387, 2478, 2714
BspANI	GGCC	7 cut(s)	16, 396, 826, 1063, 1793, 1905, 1940
BspCNI	CTCAG	6 cut(s)	847, 943, 1096, 1198, 1531, 1558
BspFNI	CGCG	3 cut(s)	1326, 1501, 2387
BspLI	GGNNCC	9 cut(s)	6, 15, 37, 588, 675, 723, 1481, 2039, 2690
BspMAI	CTGCAG	1 cut(s)	1543
BspPI	GGATC	3 cut(s)	287, 1916, 2309
BspQI	GCTCTTC	1 cut(s)	1482
BspT107I	GGYRCC	3 cut(s)	4, 35, 1479
BspTNI	GGTCTC	1 cut(s)	990
BsrBI	CCGCTC	1 cut(s)	2714
BsrDI	GCAATG	4 cut(s)	181, 319, 930, 2604
BsrFI	RCCGGY	2 cut(s)	278, 997
BssAI	RCCGGY	2 cut(s)	278, 997
BssECI	CCNNGG	5 cut(s)	1259, 1653, 1851, 2131, 2574
BssMI	GATC	7 cut(s)	292, 436, 604, 736, 1444, 1921, 2314
BssNI	GRCGYC	1 cut(s)	1480
BssT1I	CCWWGG	2 cut(s)	1653, 2574
Bst2UI	CCWGG	8 cut(s)	249, 372, 1011, 1224, 1261, 1556, 1937, 2133
Bst4CI	ACNGT	9 cut(s)	498, 807, 957, 1246, 1835, 1848, 2096, 2486, 2513
Bst6I	CTCTTC	2 cut(s)	1482, 1596
BstACI	GRCGYC	1 cut(s)	1480
BstAPI	GCANNNNNTGC	3 cut(s)	490, 637, 973
BstBAI	YACGTR	1 cut(s)	143
BstC8I	GCNNGC	4 cut(s)	704, 1220, 2023, 2389
BstDEI	CTNAG	8 cut(s)	559, 834, 930, 1104, 1185, 1518, 1545, 2699
BstDSI	CCRYGG	1 cut(s)	2574
BstEII	GGTNACC	1 cut(s)	419
BstF5I	GGATG	5 cut(s)	1195, 1420, 1577, 2003, 2126
BstFNI	CGCG	3 cut(s)	1326, 1501, 2387
BstH2I	RGCGCY	1 cut(s)	1483
BstHHI	GCGC	3 cut(s)	334, 1482, 2387
BstKTI	GATC	7 cut(s)	295, 439, 607, 739, 1447, 1924, 2317
BstMAI	GTCTC	3 cut(s)	139, 990, 1757
BstMBI	GATC	7 cut(s)	292, 436, 604, 736, 1444, 1921, 2314
BstNI	CCWGG	8 cut(s)	249, 372, 1011, 1224, 1261, 1556, 1937, 2133
BstNSI	RCATGY	1 cut(s)	820
BstPI	GGTNACC	1 cut(s)	419
BstSCI	CCNGG	8 cut(s)	247, 370, 1009, 1222, 1259, 1554, 1935, 2131
BstSFI	CTRYAG	1 cut(s)	1539
BstSLI	GKGCMC	1 cut(s)	40
BstUI	CGCG	3 cut(s)	1326, 1501, 2387
BstV2I	GAAGAC	4 cut(s)	183, 822, 1074, 1700
BstX2I	RGATCY	2 cut(s)	292, 1444
BstXI	CCANNNNNNTGG	1 cut(s)	2381
BstYI	RGATCY	2 cut(s)	292, 1444
Bsu36I	CCTNAGG	2 cut(s)	1185, 1518
BsuI	GTATCC	1 cut(s)	268
BsuRI	GGCC	7 cut(s)	16, 396, 826, 1063, 1793, 1905, 1940
BtgI	CCRYGG	1 cut(s)	2574
BtrI	CACGTC	1 cut(s)	1229
BtsCI	GGATG	5 cut(s)	1195, 1420, 1577, 2003, 2126
BtsIMutI	CAGTG	1 cut(s)	669
Cac8I	GCNNGC	4 cut(s)	704, 1220, 2023, 2389
CaiI	CAGNNNCTG	2 cut(s)	973, 1772
CfoI	GCGC	3 cut(s)	334, 1482, 2387
Cfr10I	RCCGGY	2 cut(s)	278, 997
Cfr13I	GGNCC	7 cut(s)	14, 245, 394, 572, 659, 1775, 1903
CseI	GACGC	1 cut(s)	2167
Csp6I	GTAC	7 cut(s)	5, 66, 375, 1115, 1290, 1355, 2145
CspAI	ACCGGT	2 cut(s)	278, 997
CspCI	CAANNNNNGTGG	2 cut(s)	10, 45
CviQI	GTAC	7 cut(s)	5, 66, 375, 1115, 1290, 1355, 2145
DdeI	CTNAG	8 cut(s)	559, 834, 930, 1104, 1185, 1518, 1545, 2699
DinI	GGCGCC	1 cut(s)	1481
DpnI	GATC	7 cut(s)	294, 438, 606, 738, 1446, 1923, 2316
DpnII	GATC	7 cut(s)	292, 436, 604, 736, 1444, 1921, 2314
DraI	TTTAAA	1 cut(s)	1270
EaeI	YGGCCR	1 cut(s)	1791
Eam1104I	CTCTTC	2 cut(s)	1482, 1596
EarI	CTCTTC	2 cut(s)	1482, 1596
Ecl136II	GAGCTC	1 cut(s)	2334
Eco130I	CCWWGG	2 cut(s)	1653, 2574
Eco147I	AGGCCT	1 cut(s)	1063
Eco24I	GRGCYC	3 cut(s)	591, 2040, 2336
Eco31I	GGTCTC	1 cut(s)	990
Eco47I	GGWCC	4 cut(s)	245, 572, 659, 1775
Eco53kI	GAGCTC	1 cut(s)	2334
Eco57I	CTGAAG	3 cut(s)	671, 1086, 1694
Eco81I	CCTNAGG	2 cut(s)	1185, 1518
Eco88I	CYCGRG	2 cut(s)	2521, 2649
Eco91I	GGTNACC	1 cut(s)	419
EcoICRI	GAGCTC	1 cut(s)	2334
EcoO65I	GGTNACC	1 cut(s)	419
EcoRI	GAATTC	3 cut(s)	70, 730, 2059
EcoRII	CCWGG	8 cut(s)	247, 370, 1009, 1222, 1259, 1554, 1935, 2131
EcoT14I	CCWWGG	2 cut(s)	1653, 2574
EcoT22I	ATGCAT	2 cut(s)	1576, 2667
EcoT38I	GRGCYC	3 cut(s)	591, 2040, 2336
EgeI	GGCGCC	1 cut(s)	1481
EheI	GGCGCC	1 cut(s)	1481
ErhI	CCWWGG	2 cut(s)	1653, 2574
FalI	AAGNNNNNCTT	4 cut(s)	814, 846, 1276, 1308
FaqI	GGGAC	2 cut(s)	1783, 2082
FauI	CCCGC	3 cut(s)	135, 1506, 2380
FauNDI	CATATG	1 cut(s)	346
FbaI	TGATCA	2 cut(s)	604, 736
FokI	GGATG	5 cut(s)	1202, 1427, 1564, 1990, 2113
FriOI	GRGCYC	3 cut(s)	591, 2040, 2336
FspBI	CTAG	2 cut(s)	1977, 2142
GlaI	GCGC	3 cut(s)	333, 1481, 2386
GsaI	CCCAGC	1 cut(s)	86
GsuI	CTGGAG	1 cut(s)	1425
HaeII	RGCGCY	1 cut(s)	1483
HaeIII	GGCC	7 cut(s)	16, 396, 826, 1063, 1793, 1905, 1940
HapII	CCGG	3 cut(s)	279, 998, 2304
HgaI	GACGC	1 cut(s)	2167
HhaI	GCGC	3 cut(s)	334, 1482, 2387
Hin1I	GRCGYC	1 cut(s)	1480
Hin6I	GCGC	3 cut(s)	332, 1480, 2385
HinP1I	GCGC	3 cut(s)	332, 1480, 2385
HincII	GTYRAC	3 cut(s)	1421, 2451, 2719
HindII	GTYRAC	3 cut(s)	1421, 2451, 2719
HindIII	AAGCTT	1 cut(s)	700
HinfI	GANTC	8 cut(s)	223, 287, 652, 876, 970, 1909, 2122, 2324
HpaI	GTTAAC	1 cut(s)	2719
HpaII	CCGG	3 cut(s)	279, 998, 2304
HphI	GGTGA	5 cut(s)	42, 129, 2178, 2259, 2318
Hpy166II	GTNNAC	5 cut(s)	101, 1421, 2451, 2558, 2719
Hpy188III	TCNNGA	9 cut(s)	75, 916, 1187, 1412, 1442, 1595, 2064, 2341, 2651
Hpy8I	GTNNAC	5 cut(s)	101, 1421, 2451, 2558, 2719
HpyAV	CCTTC	8 cut(s)	18, 63, 117, 345, 423, 1800, 2580, 2619
HpyCH4III	ACNGT	9 cut(s)	498, 807, 957, 1246, 1835, 1848, 2096, 2486, 2513
HpyCH4IV	ACGT	4 cut(s)	142, 186, 262, 1228
HpyF3I	CTNAG	8 cut(s)	559, 834, 930, 1104, 1185, 1518, 1545, 2699
HpySE526I	ACGT	4 cut(s)	142, 186, 262, 1228
Hsp92I	GRCGYC	1 cut(s)	1480
HspAI	GCGC	3 cut(s)	332, 1480, 2385
KasI	GGCGCC	1 cut(s)	1479
KpnI	GGTACC	1 cut(s)	8
Ksp22I	TGATCA	2 cut(s)	604, 736
KspAI	GTTAAC	1 cut(s)	2719
Kzo9I	GATC	7 cut(s)	292, 436, 604, 736, 1444, 1921, 2314
LguI	GCTCTTC	1 cut(s)	1482
LmnI	GCTCC	5 cut(s)	586, 1300, 1855, 2043, 2711
LweI	GCATC	7 cut(s)	362, 763, 874, 1583, 2012, 2648, 2674
MaeI	CTAG	2 cut(s)	1977, 2142
MaeII	ACGT	4 cut(s)	142, 186, 262, 1228
MaeIII	GTNAC	5 cut(s)	155, 178, 419, 2184, 2516
MalI	GATC	7 cut(s)	294, 438, 606, 738, 1446, 1923, 2316
MbiI	CCGCTC	1 cut(s)	2714
MboI	GATC	7 cut(s)	292, 436, 604, 736, 1444, 1921, 2314
MfeI	CAATTG	2 cut(s)	27, 593
MflI	RGATCY	2 cut(s)	292, 1444
MhlI	GDGCHC	5 cut(s)	40, 591, 1024, 2040, 2336
MlsI	TGGCCA	1 cut(s)	1793
MluNI	TGGCCA	1 cut(s)	1793
Mly113I	GGCGCC	1 cut(s)	1480
MlyI	GAGTC	1 cut(s)	661
MmeI	TCCRAC	3 cut(s)	550, 564, 2394
Mox20I	TGGCCA	1 cut(s)	1793
Mph1103I	ATGCAT	2 cut(s)	1576, 2667
MroXI	GAANNNNTTC	1 cut(s)	2608
MscI	TGGCCA	1 cut(s)	1793
MseI	TTAA	7 cut(s)	201, 855, 1269, 1728, 2436, 2718, 2727
MslI	CAYNNNNRTG	4 cut(s)	164, 1946, 2253, 2468
Msp20I	TGGCCA	1 cut(s)	1793
MspA1I	CMGCKG	2 cut(s)	2240, 2377
MspI	CCGG	3 cut(s)	279, 998, 2304
MspR9I	CCNGG	8 cut(s)	249, 372, 1011, 1224, 1261, 1556, 1937, 2133
MunI	CAATTG	2 cut(s)	27, 593
Mva1269I	GAATGC	1 cut(s)	84
MvaI	CCWGG	8 cut(s)	249, 372, 1011, 1224, 1261, 1556, 1937, 2133
MvnI	CGCG	3 cut(s)	1326, 1501, 2387
NarI	GGCGCC	1 cut(s)	1480
NcoI	CCATGG	1 cut(s)	2574
NdeI	CATATG	1 cut(s)	346
NdeII	GATC	7 cut(s)	292, 436, 604, 736, 1444, 1921, 2314
NlaIV	GGNNCC	9 cut(s)	6, 15, 37, 588, 675, 723, 1481, 2039, 2690
NmeAIII	GCCGAG	3 cut(s)	1003, 1615, 1784
NmuCI	GTSAC	1 cut(s)	2184
NsiI	ATGCAT	2 cut(s)	1576, 2667
NspI	RCATGY	1 cut(s)	820
OliI	CACNNNNGTG	1 cut(s)	2253
PaeR7I	CTCGAG	1 cut(s)	2649
PceI	AGGCCT	1 cut(s)	1063
PciI	ACATGT	1 cut(s)	816
PciSI	GCTCTTC	1 cut(s)	1482
PctI	GAATGC	1 cut(s)	84
PdmI	GAANNNNTTC	1 cut(s)	2608
PfeI	GAWTC	7 cut(s)	223, 287, 876, 970, 1909, 2122, 2324
Pfl23II	CGTACG	1 cut(s)	65
PflFI	GACNNNGTC	1 cut(s)	2562
PflMI	CCANNNNNTGG	2 cut(s)	32, 2132
PinAI	ACCGGT	2 cut(s)	278, 997
PleI	GAGTC	1 cut(s)	660
PluTI	GGCGCC	1 cut(s)	1483
PpsI	GAGTC	1 cut(s)	660
Ppu21I	YACGTR	1 cut(s)	143
PscI	ACATGT	1 cut(s)	816
Psp124BI	GAGCTC	1 cut(s)	2336
Psp6I	CCWGG	8 cut(s)	247, 370, 1009, 1222, 1259, 1554, 1935, 2131
PspEI	GGTNACC	1 cut(s)	419
PspFI	CCCAGC	1 cut(s)	82
PspGI	CCWGG	8 cut(s)	247, 370, 1009, 1222, 1259, 1554, 1935, 2131
PspLI	CGTACG	1 cut(s)	65
PspN4I	GGNNCC	9 cut(s)	6, 15, 37, 588, 675, 723, 1481, 2039, 2690
PspPI	GGNCC	7 cut(s)	14, 245, 394, 572, 659, 1775, 1903
PsrI	GAACNNNNNNTAC	2 cut(s)	1974, 2006
PstI	CTGCAG	1 cut(s)	1543
PstNI	CAGNNNCTG	2 cut(s)	973, 1772
PsuI	RGATCY	2 cut(s)	292, 1444
PsyI	GACNNNGTC	1 cut(s)	2562
PvuII	CAGCTG	2 cut(s)	2240, 2377
RsaI	GTAC	7 cut(s)	6, 67, 376, 1116, 1291, 1356, 2146
RsaNI	GTAC	7 cut(s)	5, 66, 375, 1115, 1290, 1355, 2145
RseI	CAYNNNNRTG	4 cut(s)	164, 1946, 2253, 2468
SacI	GAGCTC	1 cut(s)	2336
SapI	GCTCTTC	1 cut(s)	1482
SaqAI	TTAA	7 cut(s)	201, 855, 1269, 1728, 2436, 2718, 2727
Sau3AI	GATC	7 cut(s)	292, 436, 604, 736, 1444, 1921, 2314
Sau96I	GGNCC	7 cut(s)	14, 245, 394, 572, 659, 1775, 1903
SchI	GAGTC	1 cut(s)	661
ScrFI	CCNGG	8 cut(s)	249, 372, 1011, 1224, 1261, 1556, 1937, 2133
SduI	GDGCHC	5 cut(s)	40, 591, 1024, 2040, 2336
SfaNI	GCATC	7 cut(s)	362, 763, 874, 1583, 2012, 2648, 2674
SfcI	CTRYAG	1 cut(s)	1539
SfoI	GGCGCC	1 cut(s)	1481
Sfr274I	CTCGAG	1 cut(s)	2649
SinI	GGWCC	4 cut(s)	245, 572, 659, 1775
SlaI	CTCGAG	1 cut(s)	2649
SmiMI	CAYNNNNRTG	4 cut(s)	164, 1946, 2253, 2468
SmlI	CTYRAG	1 cut(s)	2649
SmoI	CTYRAG	1 cut(s)	2649
SseBI	AGGCCT	1 cut(s)	1063
SsiI	CCGC	7 cut(s)	17, 128, 725, 1499, 2387, 2478, 2714
SspDI	GGCGCC	1 cut(s)	1479
SspI	AATATT	1 cut(s)	1078
SspMI	CTAG	2 cut(s)	1977, 2142
SstI	GAGCTC	1 cut(s)	2336
StuI	AGGCCT	1 cut(s)	1063
StyD4I	CCNGG	8 cut(s)	247, 370, 1009, 1222, 1259, 1554, 1935, 2131
StyI	CCWWGG	2 cut(s)	1653, 2574
TaaI	ACNGT	9 cut(s)	498, 807, 957, 1246, 1835, 1848, 2096, 2486, 2513
TaiI	ACGT	4 cut(s)	145, 189, 265, 1231
TaqI	TCGA	3 cut(s)	550, 1804, 2650
TatI	WGTACW	2 cut(s)	1354, 2144
TauI	GCSGC	2 cut(s)	19, 2481
TfiI	GAWTC	7 cut(s)	223, 287, 876, 970, 1909, 2122, 2324
Tru1I	TTAA	7 cut(s)	201, 855, 1269, 1728, 2436, 2718, 2727
Tru9I	TTAA	7 cut(s)	201, 855, 1269, 1728, 2436, 2718, 2727
TscAI	CASTG	1 cut(s)	669
TseFI	GTSAC	1 cut(s)	2184
Tsp45I	GTSAC	1 cut(s)	2184
TspRI	CASTG	1 cut(s)	669
Tth111I	GACNNNGTC	1 cut(s)	2562
Van91I	CCANNNNNTGG	2 cut(s)	32, 2132
VpaK11BI	GGWCC	4 cut(s)	245, 572, 659, 1775
XapI	RAATTY	9 cut(s)	70, 229, 730, 1094, 1466, 2050, 2059, 2110, 2263
XceI	RCATGY	1 cut(s)	820
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1969, 2699
XhoI	CTCGAG	1 cut(s)	2649
XmnI	GAANNNNTTC	1 cut(s)	2608
XspI	CTAG	2 cut(s)	1977, 2142
Zsp2I	ATGCAT	2 cut(s)	1576, 2667

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.