AT1G54920

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0004748
Physical Location & Seq
Forward (+)
20470678 .. 20475193
4516 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G54920.1

Sequence Viewer

Length: 2301 bp
ATGAACGGCCTCGATTTCTTCTTCTCCCCCTCGCCAATTGTCGATACATCCACAGGAAACAACGGCGGGGATGATGATTGGGGAGATTTCGTCGACTCTTCCGATGCTTTCGATTCAGATCGCAACGGTGCTGATTCATCACATAATCGGATCGAGTCGGAGAAGAAGAGTCAGGCGAATTGGGTTACTTCTCGTGGTCCAGTGCCACTCTCTGTGTTCGGAGAAGAAGAAGAAGACGATACAGAATCAAGTGCGTCGGTTCCATCGTTTGGATTCTCATTCGATTCGTTTTCCAGTAAACGCAATGATAGCAACGGATCTGTGAATAGAGTAGTGGATTCGAATACAAATCATACTGTTGAAATTAGTGGTTTGATCCCAAATCTGTATAGAAAGAACGGACATAGTGATAACAATCATGGGAATTCAGGTGGATTCAATGTAGATCTCTCAAGTTCGAATCGTAAAATCGAGAATTCAGCTGTTAGCTTGGAGACGAATCCTTTGAATTTGGGTACAGAAAGGTCTGTCAAGGCGAGCAATGTGCTGAATTCAAGTACTATTGAGGTCACATTGGATCCAAATTATTCAGATTTGGGATTTGCCGATAAAAGTGACGATGATCTTGATGGTTGGGAGTTTAAGACTGCTGAGTCTATGTTTGGAACTCTTGGTGGAAGTTATAAGGAGGAACGAGAGAAAGCGGTCCAGAATACAGCGGATGTAAGTTCAGGTGTTTGGAGTTCACCTGCTATAAATGGAACAGGTCCAAATTTTGATACTGCTAAAGTAGATGCAGTTAAGTTAGTGGCTGAACGGGAAAATGGAGATGATGACCCTTGGGACAATGGCGGATGGGAGTTTAAGGTTGCTGAAGCGAAAGAGCCAAAGCGCGATTTAACTAACAAGGAATCTAACGGCTGGGGGTTCGGATTTGGTTTTGAACCCGTTTCTAAACTTGAAACAACCAACTCTTTTCAATCAAGTGTTGAGAAAGAGACGAAAAAGATGGAAAATGGCTCGATTTCCTTTCCAAGCAATGGAGATGTGAATTCTGGAGGAACTTCTTGGGCCTTTAAGCAGCCATCTTTGGAAATTGGAAACGAGAAAGAGGAAAAGGAAGTACAGACAGGCAAGCCCAAGGGAGTCTTGCCATTGTCCTTTTTCGAGGATGAGAAATCGGAAACCTCTGACACTTTGGTTCATGAAGATAGTTTTGTTTTAGCCAGCGATTTTCCTGTGAGAGAGAAAACTAAGGCTCCAAGTCCAACTGTGTCCATCAGTGACTTAATATCCAGATTATACAGTCAGGTGGAGGAGAAGAATGCTGTTAATATTTTAGAAAACTCTGCAACTGCTTCTAATGAAGTAAATGGTGAGGATGATTCATGGGAATTTCAGGGCCCCAAAATGCCCATAACAGATTCAGGCATAGCAGAAGGTGCTGATGATTTTGACAGTACTTGGGAGTTTCAAGGGCCTTCTCCAGCCTTGAAAATGTCTGACGTCACAGAAGTTGTCGATGAGTTTGACGATGATTCATGGGAGTTTCAAGGTCCAACACAGCCTGTGAAAGATTCCATGTCGAGGATAGGAGATAATGGTTTGTGGGAATATAAACATAGTTCTGTCGAAAATGAAGTTGGGAATCAATCCTCTGTTCCAAATGGTTTTGGAGAATTGCATGATAAAACAGTAATTCGGATAGAGCCTAATGATTACCAAGATCTCTTTCATAAGCTGAAGATTGAATTATACCACATTGCTCTATATCATCTCGAGAAATTAAAGGAAGCTCGTGACAAGGCTGCGGATTCTGATGAAGTTCAAAAATGCGACAGTGAAATCGAGGATCTGCAAAACTTGCTGAACAATGATGTTTTGATCAGTGGAGTCAACCTAGAAAGTCTTCAACCAGGATCTTCTGGCATGACTGAACTTTATAAGGCTCTCCAGGAGCCAAAGTTTCGAGAACTTGATTCAGAAGATCTCCTGACAGAGAGATTGTTATCAGCAGAGAAGGACTGGAAATCAACAATCGAACTACTCAAACACGCCACACTGACCCTGAAGATCATAAACTTGGGTTCTCTTGAGCAACAGTCGAAATACGCTTCAACTTGGTTTGAAATTTCTTCGACCTGTGCTCAAGAATTGCGACATGCTGCATCCATTTGGAAGCAGGTGATTAAAAATGATGTCCAAGAAGAAATCCTATCTAAACCTCAAGAGCTATGCTCTCTCAGTGGGAGAAATTTACAGAGTAGTAAAAATTCTGAGAGCATCAACCAGATTATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

766

Amino Acids

84.46

Weight (kDa)

4.43

Isoelectric Point (pI)

45.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SYNRG_C PF25999 698 - 743 1.7e-10 Synergin gamma, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 684, 1944
AarI CACCTGC 2 cut(s) 757, 2173
AasI GACNNNNNNGTC 1 cut(s) 652
AatII GACGTC 1 cut(s) 1509
Acc36I ACCTGC 2 cut(s) 757, 2173
AccB7I CCANNNNNTGG 2 cut(s) 269, 1040
AccI GTMKAC 1 cut(s) 93
AccII CGCG 1 cut(s) 894
AciI CCGC 5 cut(s) 66, 704, 719, 852, 1811
AclWI GGATC 7 cut(s) 158, 325, 370, 572, 585, 1860, 1927
AcuI CTGAAG 3 cut(s) 894, 1763, 2090
AcyI GRCGYC 1 cut(s) 1506
AfaI GTAC 4 cut(s) 517, 559, 1125, 1462
AfiI CCNNNNNNNGG 3 cut(s) 269, 1040, 1587
AjnI CCWGG 2 cut(s) 1915, 1953
AjuI GAANNNNNNNTTGG 4 cut(s) 1626, 1658, 1716, 1748
AluBI AGCT 5 cut(s) 482, 489, 1741, 1796, 2233
AluI AGCT 5 cut(s) 482, 489, 1741, 1796, 2233
Alw21I GWGCWC 1 cut(s) 2149
Alw26I GTCTC 2 cut(s) 488, 992
AlwI GGATC 7 cut(s) 158, 325, 370, 572, 585, 1860, 1927
Ama87I CYCGRG 1 cut(s) 1778
AoxI GGCC 4 cut(s) 7, 1071, 1402, 1478
ApaI GGGCCC 1 cut(s) 1406
ApeKI GCWGC 3 cut(s) 1081, 1808, 2165
ArsI GACNNNNNNTTYG 2 cut(s) 487, 519
Asp700I GAANNNNTTC 1 cut(s) 1908
AspLEI GCGC 1 cut(s) 894
AspS9I GGNCC 8 cut(s) 197, 706, 767, 1071, 1402, 1403, 1478, 1556
AsuHPI GGTGA 3 cut(s) 738, 1388, 2197
AsuII TTCGAA 2 cut(s) 341, 458
AvaI CYCGRG 1 cut(s) 1778
AvaII GGWCC 4 cut(s) 197, 706, 767, 1556
BaeGI GKGCMC 1 cut(s) 1406
BamHI GGATCC 1 cut(s) 577
BanII GRGCYC 1 cut(s) 1406
BauI CACGAG 2 cut(s) 192, 1797
BbsI GAAGAC 2 cut(s) 240, 1901
Bbv12I GWGCWC 1 cut(s) 2149
BbvI GCAGC 3 cut(s) 1093, 1795, 2152
BccI CCATC 6 cut(s) 271, 623, 849, 1003, 1093, 1286
BceAI ACGGC 3 cut(s) 22, 79, 934
BcgI CGANNNNNNTGC 2 cut(s) 526, 560
BciT130I CCWGG 2 cut(s) 1917, 1955
BclI TGATCA 1 cut(s) 1884
BcoDI GTCTC 2 cut(s) 488, 992
BfaI CTAG 1 cut(s) 1901
BfuAI ACCTGC 2 cut(s) 757, 2173
BglII AGATCT 3 cut(s) 445, 1726, 1987
BisI GCNGC 3 cut(s) 1082, 1809, 2166
BlsI GCNGC 3 cut(s) 1083, 1810, 2167
BmcAI AGTACT 2 cut(s) 559, 1462
Bme1390I CCNGG 2 cut(s) 1917, 1955
Bme18I GGWCC 4 cut(s) 197, 706, 767, 1556
BmeT110I CYCGRG 1 cut(s) 1778
BmgT120I GGNCC 8 cut(s) 197, 706, 767, 1071, 1402, 1403, 1478, 1556
BmiI GGNNCC 6 cut(s) 261, 579, 1260, 1404, 1405, 1959
BmrFI CCNGG 2 cut(s) 1917, 1955
BmsI GCATC 4 cut(s) 94, 784, 2177, 2292
BpiI GAAGAC 2 cut(s) 240, 1901
BplI GAGNNNNNCTC 2 cut(s) 2222, 2254
BpmI CTGGAG 3 cut(s) 1077, 1470, 1937
Bpu14I TTCGAA 2 cut(s) 341, 458
BpuEI CTTGAG 4 cut(s) 436, 2114, 2133, 2211
BsaBI GATNNNNATC 3 cut(s) 117, 414, 2008
BsaHI GRCGYC 1 cut(s) 1506
BsaJI CCNNGG 2 cut(s) 839, 1140
BsaXI ACNNNNNCTCC 6 cut(s) 75, 105, 1243, 1273, 1949, 1979
Bsc4I CCNNNNNNNGG 3 cut(s) 269, 1040, 1587
Bse1I ACTGG 3 cut(s) 200, 294, 2030
Bse3DI GCAATG 4 cut(s) 310, 547, 1045, 1761
Bse8I GATNNNNATC 3 cut(s) 117, 414, 2008
BseBI CCWGG 2 cut(s) 1917, 1955
BseDI CCNNGG 2 cut(s) 839, 1140
BseGI GGATG 7 cut(s) 47, 76, 727, 860, 1177, 1387, 2168
BseJI GATNNNNATC 3 cut(s) 117, 414, 2008
BseLI CCNNNNNNNGG 3 cut(s) 269, 1040, 1587
BseMI GCAATG 4 cut(s) 310, 547, 1045, 1761
BseMII CTCAG 3 cut(s) 642, 2257, 2268
BseNI ACTGG 3 cut(s) 200, 294, 2030
BseRI GAGGAG 1 cut(s) 1331
BseSI GKGCMC 1 cut(s) 1406
BseXI GCAGC 3 cut(s) 1093, 1795, 2152
BseYI CCCAGC 1 cut(s) 921
Bsh1236I CGCG 1 cut(s) 894
BshFI GGCC 4 cut(s) 9, 1073, 1404, 1480
BsiHKAI GWGCWC 1 cut(s) 2149
BsiHKCI CYCGRG 1 cut(s) 1778
BslFI GGGAC 1 cut(s) 857
BslI CCNNNNNNNGG 3 cut(s) 269, 1040, 1587
BsmAI GTCTC 2 cut(s) 488, 992
BsmBI CGTCTC 2 cut(s) 488, 992
BsmFI GGGAC 1 cut(s) 857
BsmI GAATGC 1 cut(s) 1330
BsnI GGCC 4 cut(s) 9, 1073, 1404, 1480
BsoBI CYCGRG 1 cut(s) 1778
Bsp119I TTCGAA 2 cut(s) 341, 458
Bsp120I GGGCCC 1 cut(s) 1402
Bsp1286I GDGCHC 2 cut(s) 1406, 2149
BspACI CCGC 5 cut(s) 66, 704, 719, 852, 1811
BspANI GGCC 4 cut(s) 9, 1073, 1404, 1480
BspCNI CTCAG 3 cut(s) 643, 2256, 2269
BspFNI CGCG 1 cut(s) 894
BspHI TCATGA 1 cut(s) 1204
BspLI GGNNCC 6 cut(s) 261, 579, 1260, 1404, 1405, 1959
BspMI ACCTGC 2 cut(s) 757, 2173
BspPI GGATC 7 cut(s) 158, 325, 370, 572, 585, 1860, 1927
BspT104I TTCGAA 2 cut(s) 341, 458
BsrDI GCAATG 4 cut(s) 310, 547, 1045, 1761
BsrI ACTGG 3 cut(s) 200, 294, 2030
BssECI CCNNGG 2 cut(s) 839, 1140
BssNI GRCGYC 1 cut(s) 1506
BssSI CACGAG 2 cut(s) 192, 1797
BssT1I CCWWGG 2 cut(s) 839, 1140
Bst2BI CACGAG 2 cut(s) 192, 1797
Bst2UI CCWGG 2 cut(s) 1917, 1955
Bst4CI ACNGT 8 cut(s) 128, 358, 1273, 1307, 1460, 1696, 1841, 2103
Bst6I CTCTTC 2 cut(s) 103, 161
BstACI GRCGYC 1 cut(s) 1506
BstAPI GCANNNNNTGC 2 cut(s) 1442, 1864
BstBI TTCGAA 2 cut(s) 341, 458
BstC8I GCNNGC 3 cut(s) 538, 1136, 1228
BstDEI CTNAG 4 cut(s) 651, 1254, 2243, 2277
BstF5I GGATG 7 cut(s) 47, 76, 727, 860, 1177, 1387, 2168
BstFNI CGCG 1 cut(s) 894
BstHHI GCGC 1 cut(s) 894
BstMAI GTCTC 2 cut(s) 488, 992
BstMWI GCNNNNNNNGC 3 cut(s) 309, 1442, 1864
BstNI CCWGG 2 cut(s) 1917, 1955
BstNSI RCATGY 1 cut(s) 2165
BstSCI CCNGG 2 cut(s) 1915, 1953
BstSLI GKGCMC 1 cut(s) 1406
BstUI CGCG 1 cut(s) 894
BstV1I GCAGC 3 cut(s) 1093, 1795, 2152
BstV2I GAAGAC 2 cut(s) 240, 1901
BstX2I RGATCY 7 cut(s) 317, 445, 577, 1726, 1852, 1919, 1987
BstYI RGATCY 7 cut(s) 317, 445, 577, 1726, 1852, 1919, 1987
BsuRI GGCC 4 cut(s) 9, 1073, 1404, 1480
BtsCI GGATG 7 cut(s) 47, 76, 727, 860, 1177, 1387, 2168
BtsIMutI CAGTG 6 cut(s) 207, 1288, 1846, 1894, 2060, 2251
BveI ACCTGC 2 cut(s) 757, 2173
Cac8I GCNNGC 3 cut(s) 538, 1136, 1228
CciI TCATGA 1 cut(s) 1204
CfoI GCGC 1 cut(s) 894
Cfr13I GGNCC 8 cut(s) 197, 706, 767, 1071, 1402, 1403, 1478, 1556
CseI GACGC 1 cut(s) 243
Csp6I GTAC 4 cut(s) 516, 558, 1124, 1461
CviAII CATG 8 cut(s) 419, 1205, 1389, 1542, 1582, 1685, 1930, 2162
CviQI GTAC 4 cut(s) 516, 558, 1124, 1461
DdeI CTNAG 4 cut(s) 651, 1254, 2243, 2277
DrdI GACNNNNNNGTC 1 cut(s) 652
DseDI GACNNNNNNGTC 1 cut(s) 652
Eam1104I CTCTTC 2 cut(s) 103, 161
EarI CTCTTC 2 cut(s) 103, 161
EciI GGCGGA 1 cut(s) 867
Eco130I CCWWGG 2 cut(s) 839, 1140
Eco24I GRGCYC 1 cut(s) 1406
Eco47I GGWCC 4 cut(s) 197, 706, 767, 1556
Eco57I CTGAAG 3 cut(s) 894, 1763, 2090
Eco88I CYCGRG 1 cut(s) 1778
EcoO109I RGGNCCY 3 cut(s) 1402, 1403, 1478
EcoRI GAATTC 4 cut(s) 424, 475, 550, 1051
EcoRII CCWGG 2 cut(s) 1915, 1953
EcoT14I CCWWGG 2 cut(s) 839, 1140
EcoT38I GRGCYC 1 cut(s) 1406
ErhI CCWWGG 2 cut(s) 839, 1140
Esp3I CGTCTC 2 cut(s) 488, 992
FaeI CATG 8 cut(s) 422, 1208, 1392, 1545, 1585, 1688, 1933, 2165
FalI AAGNNNNNCTT 2 cut(s) 1133, 1165
FaqI GGGAC 1 cut(s) 857
FatI CATG 8 cut(s) 418, 1204, 1388, 1541, 1581, 1684, 1929, 2161
FauI CCCGC 1 cut(s) 59
FbaI TGATCA 1 cut(s) 1884
FblI GTMKAC 1 cut(s) 93
Fnu4HI GCNGC 3 cut(s) 1082, 1809, 2166
FokI GGATG 7 cut(s) 34, 83, 734, 867, 1184, 1394, 2155
FriOI GRGCYC 1 cut(s) 1406
Fsp4HI GCNGC 3 cut(s) 1082, 1809, 2166
FspBI CTAG 1 cut(s) 1901
GlaI GCGC 1 cut(s) 893
GluI GCNGC 3 cut(s) 1082, 1809, 2166
GsaI CCCAGC 1 cut(s) 925
GsuI CTGGAG 3 cut(s) 1077, 1470, 1937
HaeIII GGCC 4 cut(s) 9, 1073, 1404, 1480
HgaI GACGC 1 cut(s) 243
HhaI GCGC 1 cut(s) 894
Hin1I GRCGYC 1 cut(s) 1506
Hin1II CATG 8 cut(s) 422, 1208, 1392, 1545, 1585, 1688, 1933, 2165
Hin6I GCGC 1 cut(s) 892
HinP1I GCGC 1 cut(s) 892
HincII GTYRAC 2 cut(s) 94, 1897
HindII GTYRAC 2 cut(s) 94, 1897
HphI GGTGA 3 cut(s) 738, 1388, 2197
Hpy166II GTNNAC 4 cut(s) 94, 299, 746, 1897
Hpy8I GTNNAC 4 cut(s) 94, 299, 746, 1897
Hpy99I CGWCG 2 cut(s) 95, 259
HpyAV CCTTC 3 cut(s) 1433, 1491, 2014
HpyCH4III ACNGT 8 cut(s) 128, 358, 1273, 1307, 1460, 1696, 1841, 2103
HpyCH4IV ACGT 1 cut(s) 1506
HpyCH4V TGCA 5 cut(s) 797, 1352, 1684, 1858, 2168
HpyF10VI GCNNNNNNNGC 3 cut(s) 309, 1442, 1864
HpyF3I CTNAG 4 cut(s) 651, 1254, 2243, 2277
HpySE526I ACGT 1 cut(s) 1506
Hsp92I GRCGYC 1 cut(s) 1506
Hsp92II CATG 8 cut(s) 422, 1208, 1392, 1545, 1585, 1688, 1933, 2165
HspAI GCGC 1 cut(s) 892
Ksp22I TGATCA 1 cut(s) 1884
LmnI GCTCC 2 cut(s) 1264, 1957
Lsp1109I GCAGC 3 cut(s) 1093, 1795, 2152
LweI GCATC 4 cut(s) 94, 784, 2177, 2292
MaeI CTAG 1 cut(s) 1901
MaeII ACGT 1 cut(s) 1506
MaeIII GTNAC 6 cut(s) 184, 568, 614, 1283, 1507, 1799
MfeI CAATTG 1 cut(s) 36
MflI RGATCY 7 cut(s) 317, 445, 577, 1726, 1852, 1919, 1987
MhlI GDGCHC 2 cut(s) 1406, 2149
MlyI GAGTC 6 cut(s) 89, 164, 178, 662, 1155, 1902
MmeI TCCRAC 3 cut(s) 138, 1292, 1583
MroXI GAANNNNTTC 1 cut(s) 1908
MseI TTAA 9 cut(s) 642, 801, 864, 899, 1077, 1289, 1332, 1787, 2190
MspA1I CMGCKG 2 cut(s) 482, 719
MspR9I CCNGG 2 cut(s) 1917, 1955
MunI CAATTG 1 cut(s) 36
Mva1269I GAATGC 1 cut(s) 1330
MvaI CCWGG 2 cut(s) 1917, 1955
MvnI CGCG 1 cut(s) 894
MwoI GCNNNNNNNGC 3 cut(s) 309, 1442, 1864
NlaIII CATG 8 cut(s) 422, 1208, 1392, 1545, 1585, 1688, 1933, 2165
NlaIV GGNNCC 6 cut(s) 261, 579, 1260, 1404, 1405, 1959
NmuCI GTSAC 5 cut(s) 568, 614, 1283, 1507, 1799
NspI RCATGY 1 cut(s) 2165
NspV TTCGAA 2 cut(s) 341, 458
PaeR7I CTCGAG 1 cut(s) 1778
PagI TCATGA 1 cut(s) 1204
PaqCI CACCTGC 2 cut(s) 757, 2173
PcsI WCGNNNNNNNCGW 2 cut(s) 99, 263
PctI GAATGC 1 cut(s) 1330
PdmI GAANNNNTTC 1 cut(s) 1908
PflMI CCANNNNNTGG 2 cut(s) 269, 1040
PfoI TCCNGGA 1 cut(s) 1953
PkrI GCNGC 3 cut(s) 1083, 1810, 2167
PleI GAGTC 6 cut(s) 89, 163, 177, 661, 1154, 1901
PpsI GAGTC 6 cut(s) 89, 163, 177, 661, 1154, 1901
PsiI TTATAA 2 cut(s) 684, 1944
Psp6I CCWGG 2 cut(s) 1915, 1953
PspFI CCCAGC 1 cut(s) 921
PspGI CCWGG 2 cut(s) 1915, 1953
PspN4I GGNNCC 6 cut(s) 261, 579, 1260, 1404, 1405, 1959
PspOMI GGGCCC 1 cut(s) 1402
PspPI GGNCC 8 cut(s) 197, 706, 767, 1071, 1402, 1403, 1478, 1556
PsuI RGATCY 7 cut(s) 317, 445, 577, 1726, 1852, 1919, 1987
PvuII CAGCTG 1 cut(s) 482
RsaI GTAC 4 cut(s) 517, 559, 1125, 1462
RsaNI GTAC 4 cut(s) 516, 558, 1124, 1461
SalI GTCGAC 1 cut(s) 92
SaqAI TTAA 9 cut(s) 642, 801, 864, 899, 1077, 1289, 1332, 1787, 2190
SatI GCNGC 3 cut(s) 1082, 1809, 2166
Sau96I GGNCC 8 cut(s) 197, 706, 767, 1071, 1402, 1403, 1478, 1556
ScaI AGTACT 2 cut(s) 559, 1462
SchI GAGTC 6 cut(s) 89, 164, 178, 662, 1155, 1902
ScrFI CCNGG 2 cut(s) 1917, 1955
SduI GDGCHC 2 cut(s) 1406, 2149
SfaNI GCATC 4 cut(s) 94, 784, 2177, 2292
Sfr274I CTCGAG 1 cut(s) 1778
SfuI TTCGAA 2 cut(s) 341, 458
SinI GGWCC 4 cut(s) 197, 706, 767, 1556
SlaI CTCGAG 1 cut(s) 1778
SmlI CTYRAG 5 cut(s) 451, 1778, 2093, 2148, 2226
SmoI CTYRAG 5 cut(s) 451, 1778, 2093, 2148, 2226
SsiI CCGC 5 cut(s) 66, 704, 719, 852, 1811
SspI AATATT 1 cut(s) 1336
SspMI CTAG 1 cut(s) 1901
StyD4I CCNGG 2 cut(s) 1915, 1953
StyI CCWWGG 2 cut(s) 839, 1140
TaaI ACNGT 8 cut(s) 128, 358, 1273, 1307, 1460, 1696, 1841, 2103
TaiI ACGT 1 cut(s) 1509
TatI WGTACW 3 cut(s) 557, 1123, 1460
Tru1I TTAA 9 cut(s) 642, 801, 864, 899, 1077, 1289, 1332, 1787, 2190
Tru9I TTAA 9 cut(s) 642, 801, 864, 899, 1077, 1289, 1332, 1787, 2190
TscAI CASTG 6 cut(s) 207, 1288, 1846, 1894, 2067, 2251
TseFI GTSAC 5 cut(s) 568, 614, 1283, 1507, 1799
TseI GCWGC 3 cut(s) 1081, 1808, 2165
Tsp45I GTSAC 5 cut(s) 568, 614, 1283, 1507, 1799
TspGWI ACGGA 2 cut(s) 330, 414
TspRI CASTG 6 cut(s) 207, 1288, 1846, 1894, 2067, 2251
Van91I CCANNNNNTGG 2 cut(s) 269, 1040
VpaK11BI GGWCC 4 cut(s) 197, 706, 767, 1556
XceI RCATGY 1 cut(s) 2165
XhoI CTCGAG 1 cut(s) 1778
XmiI GTMKAC 1 cut(s) 93
XmnI GAANNNNTTC 1 cut(s) 1908
XspI CTAG 1 cut(s) 1901
ZraI GACGTC 1 cut(s) 1507
ZrmI AGTACT 2 cut(s) 559, 1462
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.