Rh3AG060000

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
OG0004748
Physical Location & Seq
Forward (+)
4169054 .. 4174331
5278 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG060000.1

Sequence Viewer

Length: 3015 bp
ATGGCGGACGACGACGACGACGGCTTCGGAGACTTCACTTTCGTCTCCGCCGCCGCCGCCTTCAATCCCAATCCCACCACCACCCAACGACAATCGGCCGCCTCCGACGACGATTGGGGCGATTTCGTAACCGTCGCCGCGCCTCCGATCAAAACCCCCGTCGTTAACGGATTCGCACCCGCTCCGGCCCAAACACCGCCCGACCCCTTCGGGTTTTTCAACGTAACTAACGGCGCCGCAGCAGCGCCGTTAACGTCAGCCGGGTCGGATCCAATCCGGGTCGAGGCGAAGGCCGAAGGGGTCAGTAAGACGAGGCAGTGGAAGAAGCCGATGGGAGCCTTGCCGTTGTCGTTGTTTGGGGAAGAGGAGAGAGATGAGCAGGTGAATCAGGATTTGACTGAGAATGAGGGATTTGGGAAAAAGGGATCGAATTTGAATGGGAGTAGCGGTGGGATTGATGATTTGATATCGAATTTGTATGTTGAGAACGGTTCGAATGGGGATTCTGGTTCGGGTGGTATTGATTTTAGCAAGAGCGGGTTGAATTTGAGGTCGAATGGGGTGGATTCGAAGCTTGGTGGTTTGATTCCGAGCCAAAATGGGAAGCTGGATGGTGGTGATTTGAGTTCGAATGGTTTGAAATTTTTTGAGGGTGTAGATTTGAATGGGAGCTCAAATTCAAGTGTGTTGAAGATGAATGTGGAAGAAGGGAATGGGGATTTTGACGAGGACGATGATGATGGTTGGGAATTCAAAGCTGCTGAACCAGAGAACCGGGTTGGCAATGAGAATTCTAAGGAACGAGGAATTTTGGAAGTAGCAGAGTCAAAAGCAGAATCAAGTACACTTGTAAACGGGGGAATACAGGAACATACTGGAGGAACTGGATTTTATGGGGGGTTTGGTATTCATGAGTTTAATAATGTGTCTGTTGCATCTAATGGAACTTCTCATGGAAATGGTGAATGGGGTTTTTCATTTGACTTCAAGCCACGCCCTGTAACTCAAGATAATTTCTTCTCGGAAACATACTCGAAAAGCAAGCAGAGCAATGCTGCAACTGTATCCAATTCTTCTGGAGTTGATGATAATGTGTGGGGATTCAAGGATGCACTTTCGGAAACTGGATCAGAACATAAGTCGGAAGATGCTAAGGCTGCTACTACTGCTGGTTTAGAATTGCATACATTAGATGGTGCTGGTGCTGGTCCTCGTAATGATTTTTTTGCTGGATCGGATTGGATTTCTCACCAGTCTTCTGAAAGTAGCTTTGCATTTCCTTTCATCCCAAATTCTGGCAATAAAGATGGTGTAATCTCAGATTCCTATTCCAGTGGCAAGAAAGATGACATAGTAACAGGATTGAGCTTTCCTCCAGATAATAACCATATTGAGTCAGAAGACAATTTTTGGGAATTTAAGGATGCATTTTCAGAATCTGGATCTAAGCTTGAGGGGGAGTTGGTGGTTGCCAGTAATTCTCCTACCAATATAAAACCATCAGCAATGGGTGGAGAAAATCAGCACAGTGAGGTAACATTGAATAATCATCGGCAAGCTTTACCCTTGTCCATTTTTGGAGACGAAGAACTAGAGACTGATGATTCCTCAGTCCATCAAGATATTTCTACTCAGACAGCTGCTTCCCACCAGATCAATACTGCCAAAAGCCCTGCTACCAATGTATCCATCACTGATCTCATATCAAGCTTATACAGTCAAGTGGAACAGAACACTTCTAAACTTCATACGCCAAAAGAAACTGAAAGTACTATGCATCCTGTGACGACAATGTTAGACTCTGATTTTGTTGGTGATGAAGTGGAACAGAACACTTCTAAACTTCATACGCCAAAAGAAACTGAAAGTACTATGCATCCTGTGACGACAGTGTTAGACTCTGATTTTGTTGGTGATGATGCTGATGATGACTCCTGGGAGTTTAAGGATGATGTTTCAAAAGATCGAGACCCAACTTCTATTGCCAATCTTGAAGATTCACTTAAACATTCTTGTACTAAAATCCAGCTGGATGACTTTGTGGAATTGTATTGCAAGTTGAAGAATGAATCATATTTTCTTGCACTCTACCATCTTGACCAGAAAAAGAAAGCTCAAGGTAGTGCTTCTCTTTCTGGTGAGGATGCAACAGAGGCTCTGGATAAGGAAATCCAGAAACTTTATAATGAACTGCCTCAAGACAACATGAGATTAGATCAGTTCCAGTCAGGGAATCCTTCACCAAGAAATGAATGCCTTAACGAACTTCATAAAGCTCTGCAGGAACTGAAGTTCCAAGTCCTTGAGTCAGAATATCAATTATCACAAAGATTGTCCTTGGCAGAGAAGGATTTGATATCGGCAATTGAACTTCTAAGACATGCAGCAGCCATATTAAGGATTCTTAGACTCAGATCAGCTGAGGAGCAATCTAGGTACATTGCTGCATGGTCTCAAATGGTCTCCATATGTGCTGAAGAGCTGAAACATGGCTCTTTAATTTGGATGCAATTATTAGAAAAGAATGTTCAGAAGCAGATGTTATCTGAACCTCGAGGCAAGCAGTATGTCATTGCTCTGGGAGAAATTTACCGGGTAGTTTTAGTTCTTGGAGCCTCAATTAAACTATACAGCCCTTGGATTCTATTACAGTCCTCAGATTGTTCTAGCTTGTTTGGTCTTCTAAACGAGTGTTCTACTCTATGGTCAAGTTCAGGACTTGATGAAGCTCTCAGAAGTATTTCAGATGTTGATGATCTCAAATATGACGGAAATGTTAATGCATTATTGGATTCCTTAACGTCTATTAATCATCTCGACACATTTTCACTCCAAAACCATTTTTTGAGTGGACAACAAGCTATATGTTCGCTGTCACTTTTAACTGCAGGAGCTGTGCCAGATATTAAAATGGTGGCGTGGAATGAGGTACACTATTTATTGACACTCGCAAACTTGTGGATAAATTTAATTGGTGGTGAACCCCCACGGTTGCCGCACTTCAGTTTAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1004

Amino Acids

108.91

Weight (kDa)

4.51

Isoelectric Point (pI)

37.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SYNRG_C PF25999 807 - 998 6.5e-61 Synergin gamma, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2184
AarI CACCTGC 1 cut(s) 370
AbsI CCTCGAGG 1 cut(s) 2553
Acc36I ACCTGC 1 cut(s) 370
AccB1I GGYRCC 1 cut(s) 233
AccB7I CCANNNNNTGG 1 cut(s) 1295
AccBSI CCGCTC 2 cut(s) 182, 537
AccII CGCG 1 cut(s) 140
AclWI GGATC 6 cut(s) 263, 276, 433, 1135, 1240, 1450
AcoI YGGCCR 1 cut(s) 96
AcuI CTGAAG 3 cut(s) 2309, 2496, 2986
AcyI GRCGYC 1 cut(s) 234
AfaI GTAC 6 cut(s) 844, 1771, 1870, 2017, 2438, 2931
AfiI CCNNNNNNNGG 3 cut(s) 283, 1295, 2397
AjnI CCWGG 1 cut(s) 1934
AloI GAACNNNNNNTCC 4 cut(s) 2276, 2277, 2308, 2309
Alw21I GWGCWC 1 cut(s) 674
Alw26I GTCTC 7 cut(s) 24, 49, 1575, 1589, 1962, 2457, 2467
AlwI GGATC 6 cut(s) 263, 276, 433, 1135, 1240, 1450
AlwNI CAGNNNCTG 3 cut(s) 1439, 2287, 2894
Ama87I CYCGRG 1 cut(s) 2553
AoxI GGCC 3 cut(s) 96, 186, 291
ApeKI GCWGC 9 cut(s) 239, 242, 758, 1055, 1157, 1640, 2384, 2387, 2444
AseI ATTAAT 1 cut(s) 2808
Asp700I GAANNNNTTC 1 cut(s) 2740
AspLEI GCGC 3 cut(s) 142, 236, 247
AspS9I GGNCC 2 cut(s) 187, 1208
AsuC2I CCSGG 4 cut(s) 262, 278, 776, 2594
AsuHPI GGTGA 9 cut(s) 394, 629, 974, 1241, 1826, 1925, 2150, 2232, 2990
AsuII TTCGAA 3 cut(s) 494, 569, 629
AvaI CYCGRG 1 cut(s) 2553
AvaII GGWCC 1 cut(s) 1208
BaeI ACNNNNGTAYC 2 cut(s) 1668, 1701
BamHI GGATCC 1 cut(s) 268
BanI GGYRCC 1 cut(s) 233
BanII GRGCYC 1 cut(s) 674
BbsI GAAGAC 3 cut(s) 1248, 1407, 2672
Bbv12I GWGCWC 1 cut(s) 674
BbvCI CCTCAGC 1 cut(s) 2421
BbvI GCAGC 9 cut(s) 251, 254, 745, 1042, 1144, 1627, 2396, 2399, 2431
BccI CCATC 9 cut(s) 325, 605, 734, 1187, 1301, 1507, 1623, 1697, 2100
BceAI ACGGC 4 cut(s) 37, 232, 247, 328
BciT130I CCWGG 1 cut(s) 1936
BciVI GTATCC 2 cut(s) 1075, 1696
BcnI CCSGG 4 cut(s) 262, 278, 776, 2594
BcoDI GTCTC 7 cut(s) 24, 49, 1575, 1589, 1962, 2457, 2467
BfaI CTAG 3 cut(s) 1592, 2433, 2667
BfmI CTRYAG 2 cut(s) 2279, 2886
BfoI RGCGCY 2 cut(s) 237, 248
BfuAI ACCTGC 1 cut(s) 370
BfuI GTATCC 2 cut(s) 1075, 1696
BmcAI AGTACT 2 cut(s) 1771, 1870
Bme1390I CCNGG 5 cut(s) 262, 278, 776, 1936, 2594
Bme18I GGWCC 1 cut(s) 1208
BmeT110I CYCGRG 1 cut(s) 2553
BmgT120I GGNCC 2 cut(s) 187, 1208
BmiI GGNNCC 4 cut(s) 235, 270, 337, 2614
BmrFI CCNGG 5 cut(s) 262, 278, 776, 1936, 2594
BmsI GCATC 9 cut(s) 944, 1099, 1138, 1414, 1786, 1885, 1909, 2134, 2496
BpiI GAAGAC 3 cut(s) 1248, 1407, 2672
BplI GAGNNNNNCTC 2 cut(s) 1357, 1389
BpmI CTGGAG 3 cut(s) 897, 1098, 1359
Bpu10I CCTNAGC 2 cut(s) 1152, 2421
Bpu14I TTCGAA 3 cut(s) 494, 569, 629
BpuEI CTTGAG 5 cut(s) 990, 1472, 2100, 2181, 2324
BpuMI CCSGG 4 cut(s) 262, 278, 776, 2594
BsaHI GRCGYC 1 cut(s) 234
BsaI GGTCTC 3 cut(s) 1962, 2457, 2467
BsaJI CCNNGG 4 cut(s) 1935, 2337, 2636, 2987
BsaXI ACNNNNNCTCC 2 cut(s) 433, 463
Bsc4I CCNNNNNNNGG 3 cut(s) 283, 1295, 2397
Bse1I ACTGG 7 cut(s) 880, 889, 1129, 1252, 1332, 1473, 2224
Bse3DI GCAATG 5 cut(s) 790, 1057, 1512, 2439, 2571
BseBI CCWGG 1 cut(s) 1936
BseDI CCNNGG 4 cut(s) 1935, 2337, 2636, 2987
BseLI CCNNNNNNNGG 3 cut(s) 283, 1295, 2397
BseMI GCAATG 5 cut(s) 790, 1057, 1512, 2439, 2571
BseMII CTCAG 8 cut(s) 390, 1332, 1623, 1646, 2412, 2425, 2670, 2746
BseNI ACTGG 7 cut(s) 880, 889, 1129, 1252, 1332, 1473, 2224
BseRI GAGGAG 2 cut(s) 380, 2438
BseX3I CGGCCG 1 cut(s) 96
BseXI GCAGC 9 cut(s) 251, 254, 745, 1042, 1144, 1627, 2396, 2399, 2431
Bsh1236I CGCG 1 cut(s) 140
Bsh1285I CGRYCG 1 cut(s) 99
BshFI GGCC 3 cut(s) 98, 188, 293
BshNI GGYRCC 1 cut(s) 233
BsiEI CGRYCG 1 cut(s) 99
BsiHKAI GWGCWC 1 cut(s) 674
BsiHKCI CYCGRG 1 cut(s) 2553
BsiSI CCGG 5 cut(s) 185, 261, 277, 775, 2593
BslI CCNNNNNNNGG 3 cut(s) 283, 1295, 2397
BsmAI GTCTC 7 cut(s) 24, 49, 1575, 1589, 1962, 2457, 2467
BsmBI CGTCTC 2 cut(s) 49, 1575
BsmI GAATGC 1 cut(s) 2258
BsnI GGCC 3 cut(s) 98, 188, 293
Bso31I GGTCTC 3 cut(s) 1962, 2457, 2467
BsoBI CYCGRG 1 cut(s) 2553
Bsp119I TTCGAA 3 cut(s) 494, 569, 629
Bsp1286I GDGCHC 1 cut(s) 674
BspANI GGCC 3 cut(s) 98, 188, 293
BspCNI CTCAG 8 cut(s) 391, 1331, 1622, 1645, 2413, 2424, 2669, 2745
BspFNI CGCG 1 cut(s) 140
BspHI TCATGA 1 cut(s) 910
BspLI GGNNCC 4 cut(s) 235, 270, 337, 2614
BspMAI CTGCAG 2 cut(s) 2283, 2890
BspMI ACCTGC 1 cut(s) 370
BspPI GGATC 6 cut(s) 263, 276, 433, 1135, 1240, 1450
BspQI GCTCTTC 1 cut(s) 2472
BspT104I TTCGAA 3 cut(s) 494, 569, 629
BspT107I GGYRCC 1 cut(s) 233
BspTNI GGTCTC 3 cut(s) 1962, 2457, 2467
BsrBI CCGCTC 2 cut(s) 182, 537
BsrDI GCAATG 5 cut(s) 790, 1057, 1512, 2439, 2571
BsrI ACTGG 7 cut(s) 880, 889, 1129, 1252, 1332, 1473, 2224
BssECI CCNNGG 4 cut(s) 1935, 2337, 2636, 2987
BssNI GRCGYC 1 cut(s) 234
BssT1I CCWWGG 2 cut(s) 2337, 2636
Bst2UI CCWGG 1 cut(s) 1936
Bst4CI ACNGT 8 cut(s) 133, 491, 1063, 1529, 1718, 1891, 2652, 2991
Bst6I CTCTTC 2 cut(s) 357, 2472
BstACI GRCGYC 1 cut(s) 234
BstBI TTCGAA 3 cut(s) 494, 569, 629
BstC8I GCNNGC 3 cut(s) 1043, 1557, 2561
BstDSI CCRYGG 1 cut(s) 2987
BstFNI CGCG 1 cut(s) 140
BstH2I RGCGCY 2 cut(s) 237, 248
BstHHI GCGC 3 cut(s) 142, 236, 247
BstMAI GTCTC 7 cut(s) 24, 49, 1575, 1589, 1962, 2457, 2467
BstMCI CGRYCG 1 cut(s) 99
BstMWI GCNNNNNNNGC 6 cut(s) 56, 242, 1047, 1157, 1166, 2153
BstNI CCWGG 1 cut(s) 1936
BstNSI RCATGY 1 cut(s) 2384
BstSCI CCNGG 5 cut(s) 260, 276, 774, 1934, 2592
BstSFI CTRYAG 2 cut(s) 2279, 2886
BstUI CGCG 1 cut(s) 140
BstV1I GCAGC 9 cut(s) 251, 254, 745, 1042, 1144, 1627, 2396, 2399, 2431
BstV2I GAAGAC 3 cut(s) 1248, 1407, 2672
BstX2I RGATCY 2 cut(s) 268, 1442
BstYI RGATCY 2 cut(s) 268, 1442
BstZI CGGCCG 1 cut(s) 96
BsuI GTATCC 2 cut(s) 1075, 1696
BsuRI GGCC 3 cut(s) 98, 188, 293
BtgI CCRYGG 1 cut(s) 2987
BtsI GCAGTG 1 cut(s) 323
BtsIMutI CAGTG 5 cut(s) 323, 1339, 1534, 1692, 1896
BveI ACCTGC 1 cut(s) 370
Cac8I GCNNGC 3 cut(s) 1043, 1557, 2561
CaiI CAGNNNCTG 3 cut(s) 1439, 2287, 2894
CciI TCATGA 1 cut(s) 910
CfoI GCGC 3 cut(s) 142, 236, 247
Cfr13I GGNCC 2 cut(s) 187, 1208
Csp6I GTAC 6 cut(s) 843, 1770, 1869, 2016, 2437, 2930
CviAII CATG 6 cut(s) 911, 953, 2206, 2381, 2448, 2489
CviQI GTAC 6 cut(s) 843, 1770, 1869, 2016, 2437, 2930
DinI GGCGCC 1 cut(s) 235
EaeI YGGCCR 1 cut(s) 96
EagI CGGCCG 1 cut(s) 96
Eam1104I CTCTTC 2 cut(s) 357, 2472
EarI CTCTTC 2 cut(s) 357, 2472
EciI GGCGGA 2 cut(s) 20, 37
Ecl136II GAGCTC 1 cut(s) 672
EclXI CGGCCG 1 cut(s) 96
Eco130I CCWWGG 2 cut(s) 2337, 2636
Eco24I GRGCYC 1 cut(s) 674
Eco31I GGTCTC 3 cut(s) 1962, 2457, 2467
Eco32I GATATC 2 cut(s) 468, 2358
Eco47I GGWCC 1 cut(s) 1208
Eco52I CGGCCG 1 cut(s) 96
Eco53kI GAGCTC 1 cut(s) 672
Eco57I CTGAAG 3 cut(s) 2309, 2496, 2986
Eco88I CYCGRG 1 cut(s) 2553
EcoICRI GAGCTC 1 cut(s) 672
EcoRI GAATTC 2 cut(s) 749, 790
EcoRII CCWGG 1 cut(s) 1934
EcoRV GATATC 2 cut(s) 468, 2358
EcoT14I CCWWGG 2 cut(s) 2337, 2636
EcoT22I ATGCAT 4 cut(s) 1429, 1779, 1878, 2785
EcoT38I GRGCYC 1 cut(s) 674
EgeI GGCGCC 1 cut(s) 235
EheI GGCGCC 1 cut(s) 235
ErhI CCWWGG 2 cut(s) 2337, 2636
Esp3I CGTCTC 2 cut(s) 49, 1575
FaeI CATG 6 cut(s) 914, 956, 2209, 2384, 2451, 2492
FalI AAGNNNNNCTT 2 cut(s) 1986, 2018
FatI CATG 6 cut(s) 910, 952, 2205, 2380, 2447, 2488
FauI CCCGC 2 cut(s) 187, 530
FauNDI CATATG 1 cut(s) 2468
FriOI GRGCYC 1 cut(s) 674
FspBI CTAG 3 cut(s) 1592, 2433, 2667
GlaI GCGC 3 cut(s) 141, 235, 246
GsuI CTGGAG 3 cut(s) 897, 1098, 1359
HaeII RGCGCY 2 cut(s) 237, 248
HaeIII GGCC 3 cut(s) 98, 188, 293
HapII CCGG 5 cut(s) 185, 261, 277, 775, 2593
HhaI GCGC 3 cut(s) 142, 236, 247
Hin1I GRCGYC 1 cut(s) 234
Hin1II CATG 6 cut(s) 914, 956, 2209, 2384, 2451, 2492
Hin6I GCGC 3 cut(s) 140, 234, 245
HinP1I GCGC 3 cut(s) 140, 234, 245
HincII GTYRAC 2 cut(s) 166, 252
HindII GTYRAC 2 cut(s) 166, 252
HindIII AAGCTT 4 cut(s) 572, 1448, 1557, 1708
HpaI GTTAAC 2 cut(s) 166, 252
HpaII CCGG 5 cut(s) 185, 261, 277, 775, 2593
HphI GGTGA 9 cut(s) 394, 629, 974, 1241, 1826, 1925, 2150, 2232, 2990
Hpy166II GTNNAC 7 cut(s) 166, 252, 845, 853, 2852, 2932, 2981
Hpy8I GTNNAC 7 cut(s) 166, 252, 845, 853, 2852, 2932, 2981
Hpy99I CGWCG 8 cut(s) 14, 17, 20, 23, 110, 113, 137, 164
HpyAV CCTTC 7 cut(s) 70, 217, 283, 290, 701, 2247, 2341
HpyCH4III ACNGT 8 cut(s) 133, 491, 1063, 1529, 1718, 1891, 2652, 2991
HpyCH4IV ACGT 3 cut(s) 222, 254, 2801
HpyF10VI GCNNNNNNNGC 6 cut(s) 56, 242, 1047, 1157, 1166, 2153
HpySE526I ACGT 3 cut(s) 222, 254, 2801
Hsp92I GRCGYC 1 cut(s) 234
Hsp92II CATG 6 cut(s) 914, 956, 2209, 2384, 2451, 2492
HspAI GCGC 3 cut(s) 140, 234, 245
KasI GGCGCC 1 cut(s) 233
KspAI GTTAAC 2 cut(s) 166, 252
LguI GCTCTTC 1 cut(s) 2472
LmnI GCTCC 6 cut(s) 187, 335, 669, 2425, 2612, 2891
Lsp1109I GCAGC 9 cut(s) 251, 254, 745, 1042, 1144, 1627, 2396, 2399, 2431
LweI GCATC 9 cut(s) 944, 1099, 1138, 1414, 1786, 1885, 1909, 2134, 2496
MaeI CTAG 3 cut(s) 1592, 2433, 2667
MaeII ACGT 3 cut(s) 222, 254, 2801
MaeIII GTNAC 8 cut(s) 127, 223, 1000, 1354, 1534, 1783, 1882, 2874
MbiI CCGCTC 2 cut(s) 182, 537
MfeI CAATTG 1 cut(s) 2364
MflI RGATCY 2 cut(s) 268, 1442
MhlI GDGCHC 1 cut(s) 674
Mly113I GGCGCC 1 cut(s) 234
MlyI GAGTC 7 cut(s) 833, 1403, 1793, 1892, 1925, 2315, 2403
MmeI TCCRAC 3 cut(s) 129, 246, 1122
Mph1103I ATGCAT 4 cut(s) 1429, 1779, 1878, 2785
MroXI GAANNNNTTC 1 cut(s) 2740
MslI CAYNNNNRTG 1 cut(s) 957
MspA1I CMGCKG 3 cut(s) 1640, 2029, 2420
MspI CCGG 5 cut(s) 185, 261, 277, 775, 2593
MspR9I CCNGG 5 cut(s) 262, 278, 776, 1936, 2594
MunI CAATTG 1 cut(s) 2364
Mva1269I GAATGC 1 cut(s) 2258
MvaI CCWGG 1 cut(s) 1936
MvnI CGCG 1 cut(s) 140
MwoI GCNNNNNNNGC 6 cut(s) 56, 242, 1047, 1157, 1166, 2153
NarI GGCGCC 1 cut(s) 234
NciI CCSGG 4 cut(s) 262, 278, 776, 2594
NdeI CATATG 1 cut(s) 2468
NlaIII CATG 6 cut(s) 914, 956, 2209, 2384, 2451, 2492
NlaIV GGNNCC 4 cut(s) 235, 270, 337, 2614
NmuCI GTSAC 3 cut(s) 1783, 1882, 2874
NsiI ATGCAT 4 cut(s) 1429, 1779, 1878, 2785
NspI RCATGY 1 cut(s) 2384
NspV TTCGAA 3 cut(s) 494, 569, 629
PaeR7I CTCGAG 1 cut(s) 2553
PagI TCATGA 1 cut(s) 910
PaqCI CACCTGC 1 cut(s) 370
PciSI GCTCTTC 1 cut(s) 2472
PcsI WCGNNNNNNNCGW 2 cut(s) 15, 117
PctI GAATGC 1 cut(s) 2258
PdmI GAANNNNTTC 1 cut(s) 2740
PflMI CCANNNNNTGG 1 cut(s) 1295
PleI GAGTC 7 cut(s) 832, 1402, 1793, 1892, 1925, 2314, 2403
PluTI GGCGCC 1 cut(s) 237
PpsI GAGTC 7 cut(s) 832, 1402, 1793, 1892, 1925, 2314, 2403
PshBI ATTAAT 1 cut(s) 2808
PsiI TTATAA 1 cut(s) 2184
Psp124BI GAGCTC 1 cut(s) 674
Psp6I CCWGG 1 cut(s) 1934
PspGI CCWGG 1 cut(s) 1934
PspN4I GGNNCC 4 cut(s) 235, 270, 337, 2614
PspPI GGNCC 2 cut(s) 187, 1208
PspXI VCTCGAGB 1 cut(s) 2553
PsrI GAACNNNNNNTAC 2 cut(s) 2589, 2621
PstI CTGCAG 2 cut(s) 2283, 2890
PstNI CAGNNNCTG 3 cut(s) 1439, 2287, 2894
PsuI RGATCY 2 cut(s) 268, 1442
PvuII CAGCTG 3 cut(s) 1640, 2029, 2420
RsaI GTAC 6 cut(s) 844, 1771, 1870, 2017, 2438, 2931
RsaNI GTAC 6 cut(s) 843, 1770, 1869, 2016, 2437, 2930
RseI CAYNNNNRTG 1 cut(s) 957
SacI GAGCTC 1 cut(s) 674
SapI GCTCTTC 1 cut(s) 2472
Sau96I GGNCC 2 cut(s) 187, 1208
ScaI AGTACT 2 cut(s) 1771, 1870
SchI GAGTC 7 cut(s) 833, 1403, 1793, 1892, 1925, 2315, 2403
ScrFI CCNGG 5 cut(s) 262, 278, 776, 1936, 2594
SduI GDGCHC 1 cut(s) 674
SfaNI GCATC 9 cut(s) 944, 1099, 1138, 1414, 1786, 1885, 1909, 2134, 2496
SfcI CTRYAG 2 cut(s) 2279, 2886
SfoI GGCGCC 1 cut(s) 235
Sfr274I CTCGAG 1 cut(s) 2553
SfuI TTCGAA 3 cut(s) 494, 569, 629
SinI GGWCC 1 cut(s) 1208
SlaI CTCGAG 1 cut(s) 2553
SmiMI CAYNNNNRTG 1 cut(s) 957
SmlI CTYRAG 6 cut(s) 1005, 1451, 2115, 2196, 2303, 2553
SmoI CTYRAG 6 cut(s) 1005, 1451, 2115, 2196, 2303, 2553
SspDI GGCGCC 1 cut(s) 233
SspMI CTAG 3 cut(s) 1592, 2433, 2667
SstI GAGCTC 1 cut(s) 674
StyD4I CCNGG 5 cut(s) 260, 276, 774, 1934, 2592
StyI CCWWGG 2 cut(s) 2337, 2636
TaaI ACNGT 8 cut(s) 133, 491, 1063, 1529, 1718, 1891, 2652, 2991
TaiI ACGT 3 cut(s) 225, 257, 2804
TatI WGTACW 4 cut(s) 842, 1769, 1868, 2015
TauI GCSGC 7 cut(s) 53, 56, 59, 101, 140, 239, 2998
TscAI CASTG 5 cut(s) 323, 1339, 1534, 1699, 1896
TseFI GTSAC 3 cut(s) 1783, 1882, 2874
TseI GCWGC 9 cut(s) 239, 242, 758, 1055, 1157, 1640, 2384, 2387, 2444
Tsp45I GTSAC 3 cut(s) 1783, 1882, 2874
TspGWI ACGGA 2 cut(s) 183, 2784
TspRI CASTG 5 cut(s) 323, 1339, 1534, 1699, 1896
Van91I CCANNNNNTGG 1 cut(s) 1295
VpaK11BI GGWCC 1 cut(s) 1208
VspI ATTAAT 1 cut(s) 2808
XceI RCATGY 1 cut(s) 2384
XcmI CCANNNNNNNNNTGG 1 cut(s) 2846
XhoI CTCGAG 1 cut(s) 2553
XmnI GAANNNNTTC 1 cut(s) 2740
XspI CTAG 3 cut(s) 1592, 2433, 2667
ZrmI AGTACT 2 cut(s) 1771, 1870
Zsp2I ATGCAT 4 cut(s) 1429, 1779, 1878, 2785
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.