RchiOBHm_Chr3g0454571

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0004748
Physical Location & Seq
Forward (+)
4638342 .. 4643837
5496 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ42157

Sequence Viewer

Length: 2574 bp
ATGGGAGCTTTGCCGTTGTCGTTGTTTGGGGAAGAGGAGAGAGACGAGCAGGTGAATCAGGATTTGACTGAGAATGAGGGATTTGGGAAAAAGGGATCGAATTTGAATGGGAGTAGCGGTGGGATTGATGATTTGATATCGAATTTGTATGTCCAGAACGGTTCGAATCGGGATTCTGGTTCGGGTGGTATTGATTTTAGCAAGAGCGGGTTGAATTTGAGGTCGAATGGGGTGGATTCGAAGCTTGCTGGTTTGATTCCGAGCCAAAATGGGAAGCTGGATGGTGGTGATTTGAGTTCGAATGGTTTGAAATTTTTTGAAGGTGTAGATTTGAATGGGAGCTCGAATTCAAGTGTGTTGAAGATGAATGTGGAAGAAGGGAATGGGGATTTTGACGAGGACGATGATGATGGTTGGGAATTCAAAGCTGCTGAACCAGAGAACCGGGTTGGCAATGAGAATTCTAAGGAACGAGGAATTTTGGAAGTAGCAGAATCAAGTACACTTGTAAACGGGGGAATACAGGAACATACTGGAGGAACTGGATTTTCTGGGGGGTTTGGTATTCATGAGTTTAATAATGTGTCTGTTGCATCTAATGGAACTTCTCATGGAAATGGTGAATGGGGTTTTTCATTTGACTTCAAGCCACGCCCTGTAATTCAAGATAATTTCTTCTCGGAAACATACTCGAAAAGCAAGCAGAGCAATGCTGCAACTGTATCCAATTCTTCCGGAGTTGATGATAATGTGTGGGGATTCAAGGATGCATTTTCGGAAACTGGATCAGAACATAAGTCGGAAGATGCTAAGGCTGCTACTCCTGCTGGTGTAGAATTGCATACATTAGATGGTGCTGGTGCTGGTCCTCGTAATGATTTTTTTGCTGGGTCGGATTGGATTTCTCACCAGTCTTCTGAAAGTAGCTTTGCATTTCCTTTCATCCCAAATTCTGGCAATAAAGATGGTGTAATCTCAGATTCCTATTCCAGTGGCAAGAAAGATGACATAGTAACAGGATTGAGCTTTCCTCCAGATACTAACCATATTGAGTCAGAAGACAACTTTTGGGAATTTAAGGATGCATTTTCAGAATCTGGATCTAAGCTTGAGGGGGAGTTGGTGGTTGCCAGTAATTCTCCTACCAATATAAAACCATCAGCAATGGGTGGAGAAAATCAGCACAGTGAGGTAACATTGAATAATCATCGGCAAGCTTTACCCTTGTCCATTTTTGGAGGCGAAGAACTAGAGACTGATGATTCCTCAGTCCATCAAGATATTTCTACTCAGACAGCTGCTTCCCAGCAGATAAATACTGCCAAAAGCCCTGCTACCAATGTATCCATCACTGATCTCATATCAAGCTTATACAGTCAAGTGGAACAGAACACTTCTAAACTTCATACGCCAAAAGAAACTGAAAGTACTATGCATCCTGTGACGACAGTGTTAGACTCTGATTTTGTTGGTGATGATGCTGATGATGACTCCTGGAAGTTTAAGGATGCTGTTTCAAAAGATCGAGACCCAACTTCTATTGCCAATCTTGAAGATTCACTTAAACATTCTTGTACTAAAATCCAGCTGGATGACTTTGTGGAATTGTATTGCAAGTTGAAGAATGAATCATATTTTCTTGCACTCTACCATCTTGACCAGAAAAAGAAAGCTCAAGGTCGTGCTTCTCTTTCTGGTGAGGATGCAACAGAGGCTCTGGATAAGGAAATCCAGAAACTTTATAATGAACTGCCTCAAGACAACATGAGATTAGATCAGTTCCAGTCAGGGAATCCTTCGCCAAGAAATGAATGCCTTAACGAACTTCATAAAGCTCTGCAGGAACTGAAGTTCCAAGTCCTTGAGTCAGAATATCAATTGTCACAAAGATTGTCCTTGGCAGAGAAGGATTTGATATCGGCAATTGAACTTCTAAGACATGCAGCAGCCATATTAAGGATTCTGAGACTCAGATCAGCTGAGGAGCAATCTAGGTACATTGCTGCATGGTCTCAAATGGTCTCCATATGTGCTGAAGAGCTGAAACATGGCTCTTTAATTTGGATGCAATTATTAGAAAAGAATGTTCAGAAGCAGATGCTATCTGAACCTCGAGGCAAGCAGTATATCATTGCTCTGGGAGAAATTTACCGGGTAGTTTTAGTTCTTGGAGCCTCAATTAAACTATACAGCCCTTGGATTCTATTACAGTCCTCAGATTGTTCTAGCTTGTTTGGTCTTCTAAACGAGTGTTCTACTCTATGGTCAAGTTCAGGACTTGATGAAGCTCTCAGAAGTATTTCAGATGTTGATGATCTCAAATATGACGGAAATGTTAATGCATTATTGGATTCCTTAACGTCTATTAATCATCTCGACACATTTTCACTCCAAAACCATTTTTTGAGTGGACAACAAGCTATATGTTCGCTGTCACTTTTAACTGCAGGAGCTGTGCCAGGTATTAAAATGGTGGCGTGGAATGAGGTACACTATTTATTGACACTCGCAAACTTGTGGATAAATTTAATTGGTGGTGAACCCCCACGGTTGCCGCACTTCAGTTTAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

857

Amino Acids

93.38

Weight (kDa)

4.62

Isoelectric Point (pI)

38.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SYNRG_C PF25999 660 - 851 2.3e-61 Synergin gamma, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1743
AarI CACCTGC 1 cut(s) 40
AbsI CCTCGAGG 1 cut(s) 2112
Acc36I ACCTGC 1 cut(s) 40
AccB7I CCANNNNNTGG 1 cut(s) 953
AccBSI CCGCTC 1 cut(s) 207
AccIII TCCGGA 1 cut(s) 734
AciI CCGC 3 cut(s) 117, 207, 2555
AclWI GGATC 3 cut(s) 103, 793, 1108
AcuI CTGAAG 3 cut(s) 1868, 2055, 2545
AfaI GTAC 5 cut(s) 502, 1429, 1576, 1997, 2490
AfiI CCNNNNNNNGG 2 cut(s) 953, 1956
AjnI CCWGG 2 cut(s) 1493, 2458
AloI GAACNNNNNNTCC 4 cut(s) 1835, 1836, 1867, 1868
Alw21I GWGCWC 1 cut(s) 344
Alw26I GTCTC 6 cut(s) 36, 1247, 1521, 1960, 2016, 2026
AlwI GGATC 3 cut(s) 103, 793, 1108
AlwNI CAGNNNCTG 3 cut(s) 1097, 1846, 2453
Ama87I CYCGRG 1 cut(s) 2112
Aor13HI TCCGGA 1 cut(s) 734
ApeKI GCWGC 7 cut(s) 428, 713, 815, 1298, 1943, 1946, 2003
ArsI GACNNNNNNTTYG 2 cut(s) 1448, 1480
AseI ATTAAT 1 cut(s) 2367
Asp700I GAANNNNTTC 1 cut(s) 2299
AspS9I GGNCC 1 cut(s) 866
AsuC2I CCSGG 2 cut(s) 446, 2153
AsuHPI GGTGA 7 cut(s) 64, 299, 632, 899, 1484, 1709, 2549
AsuII TTCGAA 3 cut(s) 164, 239, 299
AvaI CYCGRG 1 cut(s) 2112
AvaII GGWCC 1 cut(s) 866
BaeI ACNNNNGTAYC 2 cut(s) 1326, 1359
BanII GRGCYC 1 cut(s) 344
BbsI GAAGAC 3 cut(s) 906, 1065, 2231
Bbv12I GWGCWC 1 cut(s) 344
BbvCI CCTCAGC 1 cut(s) 1980
BbvI GCAGC 7 cut(s) 415, 700, 802, 1285, 1955, 1958, 1990
BccI CCATC 8 cut(s) 275, 404, 845, 959, 1165, 1281, 1355, 1659
BciT130I CCWGG 2 cut(s) 1495, 2460
BciVI GTATCC 2 cut(s) 733, 1354
BcnI CCSGG 2 cut(s) 446, 2153
BcoDI GTCTC 6 cut(s) 36, 1247, 1521, 1960, 2016, 2026
BfaI CTAG 3 cut(s) 1250, 1992, 2226
BfmI CTRYAG 2 cut(s) 1838, 2445
BfuAI ACCTGC 1 cut(s) 40
BfuI GTATCC 2 cut(s) 733, 1354
BisI GCNGC 8 cut(s) 429, 714, 816, 1299, 1944, 1947, 2004, 2555
BlsI GCNGC 8 cut(s) 430, 715, 817, 1300, 1945, 1948, 2005, 2556
BmcAI AGTACT 1 cut(s) 1429
Bme1390I CCNGG 4 cut(s) 446, 1495, 2153, 2460
Bme18I GGWCC 1 cut(s) 866
BmeT110I CYCGRG 1 cut(s) 2112
BmgT120I GGNCC 1 cut(s) 866
BmiI GGNNCC 1 cut(s) 2173
BmrFI CCNGG 4 cut(s) 446, 1495, 2153, 2460
BpiI GAAGAC 3 cut(s) 906, 1065, 2231
BplI GAGNNNNNCTC 2 cut(s) 1015, 1047
BpmI CTGGAG 2 cut(s) 555, 1017
Bpu10I CCTNAGC 2 cut(s) 810, 1980
Bpu14I TTCGAA 3 cut(s) 164, 239, 299
BpuEI CTTGAG 4 cut(s) 1130, 1659, 1740, 1883
BpuMI CCSGG 2 cut(s) 446, 2153
BsaI GGTCTC 3 cut(s) 1521, 2016, 2026
BsaJI CCNNGG 3 cut(s) 1896, 2195, 2546
BsaWI WCCGGW 1 cut(s) 734
BsaXI ACNNNNNCTCC 2 cut(s) 103, 133
Bsc4I CCNNNNNNNGG 2 cut(s) 953, 1956
Bse1I ACTGG 7 cut(s) 538, 547, 787, 910, 990, 1131, 1783
Bse3DI GCAATG 5 cut(s) 460, 715, 1170, 1998, 2130
BseAI TCCGGA 1 cut(s) 734
BseBI CCWGG 2 cut(s) 1495, 2460
BseDI CCNNGG 3 cut(s) 1896, 2195, 2546
BseGI GGATG 9 cut(s) 286, 772, 942, 1087, 1435, 1513, 1597, 1708, 2070
BseLI CCNNNNNNNGG 2 cut(s) 953, 1956
BseMI GCAATG 5 cut(s) 460, 715, 1170, 1998, 2130
BseMII CTCAG 9 cut(s) 60, 990, 1281, 1304, 1955, 1971, 1984, 2229, 2305
BseNI ACTGG 7 cut(s) 538, 547, 787, 910, 990, 1131, 1783
BseRI GAGGAG 2 cut(s) 50, 1997
BseXI GCAGC 7 cut(s) 415, 700, 802, 1285, 1955, 1958, 1990
BseYI CCCAGC 2 cut(s) 887, 1305
BsiHKAI GWGCWC 1 cut(s) 344
BsiHKCI CYCGRG 1 cut(s) 2112
BsiSI CCGG 3 cut(s) 445, 735, 2152
BslI CCNNNNNNNGG 2 cut(s) 953, 1956
BsmAI GTCTC 6 cut(s) 36, 1247, 1521, 1960, 2016, 2026
BsmBI CGTCTC 1 cut(s) 36
BsmI GAATGC 1 cut(s) 1817
Bso31I GGTCTC 3 cut(s) 1521, 2016, 2026
BsoBI CYCGRG 1 cut(s) 2112
Bsp119I TTCGAA 3 cut(s) 164, 239, 299
Bsp1286I GDGCHC 1 cut(s) 344
Bsp13I TCCGGA 1 cut(s) 734
Bsp143I GATC 8 cut(s) 95, 785, 1100, 1354, 1522, 1774, 1973, 2314
BspACI CCGC 3 cut(s) 117, 207, 2555
BspCNI CTCAG 9 cut(s) 61, 989, 1280, 1303, 1956, 1972, 1983, 2228, 2304
BspEI TCCGGA 1 cut(s) 734
BspHI TCATGA 1 cut(s) 568
BspLI GGNNCC 1 cut(s) 2173
BspMAI CTGCAG 2 cut(s) 1842, 2449
BspMI ACCTGC 1 cut(s) 40
BspPI GGATC 3 cut(s) 103, 793, 1108
BspQI GCTCTTC 1 cut(s) 2031
BspT104I TTCGAA 3 cut(s) 164, 239, 299
BspTNI GGTCTC 3 cut(s) 1521, 2016, 2026
BsrBI CCGCTC 1 cut(s) 207
BsrDI GCAATG 5 cut(s) 460, 715, 1170, 1998, 2130
BsrI ACTGG 7 cut(s) 538, 547, 787, 910, 990, 1131, 1783
BssECI CCNNGG 3 cut(s) 1896, 2195, 2546
BssMI GATC 8 cut(s) 95, 785, 1100, 1354, 1522, 1774, 1973, 2314
BssT1I CCWWGG 2 cut(s) 1896, 2195
Bst2UI CCWGG 2 cut(s) 1495, 2460
Bst4CI ACNGT 7 cut(s) 161, 721, 1187, 1376, 1450, 2211, 2550
Bst6I CTCTTC 2 cut(s) 27, 2031
BstBI TTCGAA 3 cut(s) 164, 239, 299
BstC8I GCNNGC 4 cut(s) 246, 701, 1215, 2120
BstDSI CCRYGG 1 cut(s) 2546
BstF5I GGATG 9 cut(s) 286, 772, 942, 1087, 1435, 1513, 1597, 1708, 2070
BstKTI GATC 8 cut(s) 98, 788, 1103, 1357, 1525, 1777, 1976, 2317
BstMAI GTCTC 6 cut(s) 36, 1247, 1521, 1960, 2016, 2026
BstMBI GATC 8 cut(s) 95, 785, 1100, 1354, 1522, 1774, 1973, 2314
BstMWI GCNNNNNNNGC 4 cut(s) 705, 815, 824, 1712
BstNI CCWGG 2 cut(s) 1495, 2460
BstNSI RCATGY 1 cut(s) 1943
BstSCI CCNGG 4 cut(s) 444, 1493, 2151, 2458
BstSFI CTRYAG 2 cut(s) 1838, 2445
BstV1I GCAGC 7 cut(s) 415, 700, 802, 1285, 1955, 1958, 1990
BstV2I GAAGAC 3 cut(s) 906, 1065, 2231
BstX2I RGATCY 1 cut(s) 1100
BstYI RGATCY 1 cut(s) 1100
BsuI GTATCC 2 cut(s) 733, 1354
BtgI CCRYGG 1 cut(s) 2546
BtsCI GGATG 9 cut(s) 286, 772, 942, 1087, 1435, 1513, 1597, 1708, 2070
BtsIMutI CAGTG 4 cut(s) 997, 1192, 1350, 1455
BveI ACCTGC 1 cut(s) 40
Cac8I GCNNGC 4 cut(s) 246, 701, 1215, 2120
CaiI CAGNNNCTG 3 cut(s) 1097, 1846, 2453
CciI TCATGA 1 cut(s) 568
Cfr13I GGNCC 1 cut(s) 866
Csp6I GTAC 5 cut(s) 501, 1428, 1575, 1996, 2489
CviAII CATG 6 cut(s) 569, 611, 1765, 1940, 2007, 2048
CviQI GTAC 5 cut(s) 501, 1428, 1575, 1996, 2489
DpnI GATC 8 cut(s) 97, 787, 1102, 1356, 1524, 1776, 1975, 2316
DpnII GATC 8 cut(s) 95, 785, 1100, 1354, 1522, 1774, 1973, 2314
Eam1104I CTCTTC 2 cut(s) 27, 2031
EarI CTCTTC 2 cut(s) 27, 2031
Ecl136II GAGCTC 1 cut(s) 342
Eco130I CCWWGG 2 cut(s) 1896, 2195
Eco24I GRGCYC 1 cut(s) 344
Eco31I GGTCTC 3 cut(s) 1521, 2016, 2026
Eco32I GATATC 2 cut(s) 138, 1917
Eco47I GGWCC 1 cut(s) 866
Eco53kI GAGCTC 1 cut(s) 342
Eco57I CTGAAG 3 cut(s) 1868, 2055, 2545
Eco88I CYCGRG 1 cut(s) 2112
EcoICRI GAGCTC 1 cut(s) 342
EcoRI GAATTC 3 cut(s) 346, 419, 460
EcoRII CCWGG 2 cut(s) 1493, 2458
EcoRV GATATC 2 cut(s) 138, 1917
EcoT14I CCWWGG 2 cut(s) 1896, 2195
EcoT22I ATGCAT 4 cut(s) 772, 1087, 1437, 2344
EcoT38I GRGCYC 1 cut(s) 344
ErhI CCWWGG 2 cut(s) 1896, 2195
Esp3I CGTCTC 1 cut(s) 36
FaeI CATG 6 cut(s) 572, 614, 1768, 1943, 2010, 2051
FalI AAGNNNNNCTT 2 cut(s) 1545, 1577
FatI CATG 6 cut(s) 568, 610, 1764, 1939, 2006, 2047
FauI CCCGC 1 cut(s) 200
FauNDI CATATG 1 cut(s) 2027
Fnu4HI GCNGC 8 cut(s) 429, 714, 816, 1299, 1944, 1947, 2004, 2555
FokI GGATG 9 cut(s) 293, 779, 929, 1094, 1422, 1520, 1604, 1715, 2077
FriOI GRGCYC 1 cut(s) 344
Fsp4HI GCNGC 8 cut(s) 429, 714, 816, 1299, 1944, 1947, 2004, 2555
FspBI CTAG 3 cut(s) 1250, 1992, 2226
GluI GCNGC 8 cut(s) 429, 714, 816, 1299, 1944, 1947, 2004, 2555
GsaI CCCAGC 2 cut(s) 891, 1309
GsuI CTGGAG 2 cut(s) 555, 1017
HapII CCGG 3 cut(s) 445, 735, 2152
Hin1II CATG 6 cut(s) 572, 614, 1768, 1943, 2010, 2051
HindIII AAGCTT 4 cut(s) 242, 1106, 1215, 1366
HpaII CCGG 3 cut(s) 445, 735, 2152
HphI GGTGA 7 cut(s) 64, 299, 632, 899, 1484, 1709, 2549
Hpy166II GTNNAC 5 cut(s) 503, 511, 2411, 2491, 2540
Hpy8I GTNNAC 5 cut(s) 503, 511, 2411, 2491, 2540
HpyAV CCTTC 4 cut(s) 314, 371, 1806, 1900
HpyCH4III ACNGT 7 cut(s) 161, 721, 1187, 1376, 1450, 2211, 2550
HpyCH4IV ACGT 1 cut(s) 2360
HpyF10VI GCNNNNNNNGC 4 cut(s) 705, 815, 824, 1712
HpySE526I ACGT 1 cut(s) 2360
Hsp92II CATG 6 cut(s) 572, 614, 1768, 1943, 2010, 2051
Kpn2I TCCGGA 1 cut(s) 734
Kzo9I GATC 8 cut(s) 95, 785, 1100, 1354, 1522, 1774, 1973, 2314
LguI GCTCTTC 1 cut(s) 2031
LmnI GCTCC 5 cut(s) 5, 339, 1984, 2171, 2450
Lsp1109I GCAGC 7 cut(s) 415, 700, 802, 1285, 1955, 1958, 1990
MaeI CTAG 3 cut(s) 1250, 1992, 2226
MaeII ACGT 1 cut(s) 2360
MaeIII GTNAC 5 cut(s) 1012, 1192, 1441, 1881, 2433
MalI GATC 8 cut(s) 97, 787, 1102, 1356, 1524, 1776, 1975, 2316
MbiI CCGCTC 1 cut(s) 207
MboI GATC 8 cut(s) 95, 785, 1100, 1354, 1522, 1774, 1973, 2314
MfeI CAATTG 2 cut(s) 1877, 1923
MflI RGATCY 1 cut(s) 1100
MhlI GDGCHC 1 cut(s) 344
MlyI GAGTC 5 cut(s) 1061, 1451, 1484, 1874, 1962
MmeI TCCRAC 2 cut(s) 780, 873
Mph1103I ATGCAT 4 cut(s) 772, 1087, 1437, 2344
MroI TCCGGA 1 cut(s) 734
MroXI GAANNNNTTC 1 cut(s) 2299
MslI CAYNNNNRTG 1 cut(s) 615
MspA1I CMGCKG 3 cut(s) 1298, 1588, 1979
MspI CCGG 3 cut(s) 445, 735, 2152
MspR9I CCNGG 4 cut(s) 446, 1495, 2153, 2460
MunI CAATTG 2 cut(s) 1877, 1923
Mva1269I GAATGC 1 cut(s) 1817
MvaI CCWGG 2 cut(s) 1495, 2460
MwoI GCNNNNNNNGC 4 cut(s) 705, 815, 824, 1712
NciI CCSGG 2 cut(s) 446, 2153
NdeI CATATG 1 cut(s) 2027
NdeII GATC 8 cut(s) 95, 785, 1100, 1354, 1522, 1774, 1973, 2314
NlaIII CATG 6 cut(s) 572, 614, 1768, 1943, 2010, 2051
NlaIV GGNNCC 1 cut(s) 2173
NmuCI GTSAC 3 cut(s) 1441, 1881, 2433
NsiI ATGCAT 4 cut(s) 772, 1087, 1437, 2344
NspI RCATGY 1 cut(s) 1943
NspV TTCGAA 3 cut(s) 164, 239, 299
PaeR7I CTCGAG 1 cut(s) 2112
PagI TCATGA 1 cut(s) 568
PaqCI CACCTGC 1 cut(s) 40
PciSI GCTCTTC 1 cut(s) 2031
PctI GAATGC 1 cut(s) 1817
PdmI GAANNNNTTC 1 cut(s) 2299
PflMI CCANNNNNTGG 1 cut(s) 953
PfoI TCCNGGA 1 cut(s) 1493
PkrI GCNGC 8 cut(s) 430, 715, 817, 1300, 1945, 1948, 2005, 2556
PleI GAGTC 5 cut(s) 1060, 1451, 1484, 1873, 1962
PpsI GAGTC 5 cut(s) 1060, 1451, 1484, 1873, 1962
PshBI ATTAAT 1 cut(s) 2367
PsiI TTATAA 1 cut(s) 1743
Psp124BI GAGCTC 1 cut(s) 344
Psp6I CCWGG 2 cut(s) 1493, 2458
PspFI CCCAGC 2 cut(s) 887, 1305
PspGI CCWGG 2 cut(s) 1493, 2458
PspN4I GGNNCC 1 cut(s) 2173
PspPI GGNCC 1 cut(s) 866
PspXI VCTCGAGB 1 cut(s) 2112
PsrI GAACNNNNNNTAC 2 cut(s) 2148, 2180
PstI CTGCAG 2 cut(s) 1842, 2449
PstNI CAGNNNCTG 3 cut(s) 1097, 1846, 2453
PsuI RGATCY 1 cut(s) 1100
PvuII CAGCTG 3 cut(s) 1298, 1588, 1979
RsaI GTAC 5 cut(s) 502, 1429, 1576, 1997, 2490
RsaNI GTAC 5 cut(s) 501, 1428, 1575, 1996, 2489
RseI CAYNNNNRTG 1 cut(s) 615
SacI GAGCTC 1 cut(s) 344
SapI GCTCTTC 1 cut(s) 2031
SatI GCNGC 8 cut(s) 429, 714, 816, 1299, 1944, 1947, 2004, 2555
Sau3AI GATC 8 cut(s) 95, 785, 1100, 1354, 1522, 1774, 1973, 2314
Sau96I GGNCC 1 cut(s) 866
ScaI AGTACT 1 cut(s) 1429
SchI GAGTC 5 cut(s) 1061, 1451, 1484, 1874, 1962
ScrFI CCNGG 4 cut(s) 446, 1495, 2153, 2460
SduI GDGCHC 1 cut(s) 344
SfcI CTRYAG 2 cut(s) 1838, 2445
Sfr274I CTCGAG 1 cut(s) 2112
SfuI TTCGAA 3 cut(s) 164, 239, 299
SinI GGWCC 1 cut(s) 866
SlaI CTCGAG 1 cut(s) 2112
SmiMI CAYNNNNRTG 1 cut(s) 615
SmlI CTYRAG 5 cut(s) 1109, 1674, 1755, 1862, 2112
SmoI CTYRAG 5 cut(s) 1109, 1674, 1755, 1862, 2112
SsiI CCGC 3 cut(s) 117, 207, 2555
SspMI CTAG 3 cut(s) 1250, 1992, 2226
SstI GAGCTC 1 cut(s) 344
StyD4I CCNGG 4 cut(s) 444, 1493, 2151, 2458
StyI CCWWGG 2 cut(s) 1896, 2195
TaaI ACNGT 7 cut(s) 161, 721, 1187, 1376, 1450, 2211, 2550
TaiI ACGT 1 cut(s) 2363
TatI WGTACW 3 cut(s) 500, 1427, 1574
TauI GCSGC 1 cut(s) 2557
TscAI CASTG 4 cut(s) 997, 1192, 1357, 1455
TseFI GTSAC 3 cut(s) 1441, 1881, 2433
TseI GCWGC 7 cut(s) 428, 713, 815, 1298, 1943, 1946, 2003
Tsp45I GTSAC 3 cut(s) 1441, 1881, 2433
TspGWI ACGGA 1 cut(s) 2343
TspRI CASTG 4 cut(s) 997, 1192, 1357, 1455
Van91I CCANNNNNTGG 1 cut(s) 953
VpaK11BI GGWCC 1 cut(s) 866
VspI ATTAAT 1 cut(s) 2367
XceI RCATGY 1 cut(s) 1943
XcmI CCANNNNNNNNNTGG 1 cut(s) 2405
XhoI CTCGAG 1 cut(s) 2112
XmnI GAANNNNTTC 1 cut(s) 2299
XspI CTAG 3 cut(s) 1250, 1992, 2226
ZrmI AGTACT 1 cut(s) 1429
Zsp2I ATGCAT 4 cut(s) 772, 1087, 1437, 2344
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.