Rh3DG061700

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0004748
Physical Location & Seq
Forward (+)
4136752 .. 4142705
5954 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG061700.1

Sequence Viewer

Length: 2568 bp
ATGGCGGACGACGACGACGACGGCTTCGGAGACTTCACTTTCGTCTCCGCCGCCGCCGCCTTCAATCCCAATCCCACCACCACCCAACGACAATCGGCCGCCTCCGACGACGATTGGGGCGATTTCGTAACCGTCGCCGCGCCTCCGATCAAAACCCCCGTCGTTAACGGATTCGCACCCGCTCCGGCCCAAACACCGCCCGACCCGTTCGGGTTTTTCAACGTAACTAACGGCGCTGCAGCAGCGCCGTTAACGTCAGCCGGGTCGGATCCAATCCGGGTCGAGATGAAGGCCGAAGGGGTCAGTAAGACGAGGCAGTGGAAGAAGCCGATGGGAGCTTTGCCGTTGTCGTTGTTTGGGGAAGAGGAGAGAGATGAGCAGGTGAATCAGGATTTGACTGAGAATGAGGGATTTGGGAAAAAGGGATCGAATTTGAATGGGAGTAGCGGTGGGATTGATGTTTTGATATCGAATTTGTATGTTGAGAACGGTTCGAATCGGAATTCTGGTTCGGGTGGTATTGATTTTAGCAAGAGCGGGTTGAATTTGAGGTCGAATGGGGTGGATTCGAAGCTTGGTGGTTTGATTCCGAGCCAAAATGGGAAGCTGGATGGTGGTGATTTGAGTTCGAATGGTTTGAAATTTTTTGAGGGTGTAGATTTGAATGGGAGCTCAAATTCAAGTGTGCTGAAGATGAATGTGGAAGAAGGGAATGGGGATTTTGACGAGGACGATGATGATGGTTGGGAATTCAAAGCTGCAGAACCAGAGAACCGGGTTGGCAATGAGAATTCTAAGGAACGAGGAATTTTGGAAGTAGCAGAGTCAAAAGCAGAATCAAGTACACTTGTAAACGGGGGAATACAGGAACATACTGGAGGAACTGGATTTTATGGGGGGTTTGGTATTCATGAGTTTAATAATGTGTCTGTTGCATCTAATGGAACTTCTCATGGAAATGGTGAATGGGGTTTTTCATTTGACTTCAAGCCACGCCCTGTAACTCAAGATAATTTCTTCTCGGAAACATACTCGAAAAGCAAGCAGAGCAATGCTGCAACTGTATCCAATTCTTCCGGAGTTGATGATAATGTGTGGGGATTCAAGGATGCACTTTCGGAAACTGGATCAGAACATAAGTCGGAAGATGCTAAGGCTGCTACTCCTGCTGGTTTAGAATTGCATACATTAGATGGTGCTGGTGCTGGTCCTCGTAATGATTTTTTTGCTGGGTCGGATTGGATTTCTCACCAGTCTTCTGAAAGTAGCTTTGCATTTCCTTTCATCCCAAATTCTGGCAATAAAGATGGTGTAATCTCAGATTCCTATTCCAGTGGCAAGAAAGATGACATAGTAACAGGATTGAGCTTTGCACCGGATAATAACCATATTGAGTCAGAAGACAATTTTTGGGAATTTAAGGATGCATTTTCAGAATCTGGATCTAAGCTTGAGGGGGAGTTGGTGGTTGCCAGTAATTCTCCTACCAATATAAAACCATCAACAATGGGTGGAGAAAATCAGCACAGTGAGGTAACATTGAATAATCATCGGCAAGCTTTACCCTTGTCCATTTTTGGAGACGAAGAACTAGAGACTGATGATTCCTCAGTCCATCAAGATATTTCTACTCAGACAGCTGCTTCCCACCAGATCAATACTGCCAAAAGCCCTGCTACCAATGTATCCATCACTGATCTCATATCAAGCTTATACAGTCAAGTGGAACAGAACACTTCTAAACTTCATACGCCAAAAGAAACTGAAAGTACTATGCATCCTGTGACGACAGTGTTAGACTCTGATTTTGTTGGTGATGAAGTGGAACAGAACACTTCTAAACTTCATACGCCAAAAGAAACTGAAAGTACTATGCATCCTGTGACGACAGTGTTAGACTCTGATTTTGTTGGTGATGATGCTGATGATGACTCCTGGGAGTTTAAGGATGCTGTTTCAAAAGATCAAGACCCAACTTCTATTGCCAATCTTGAAGATTCACTTAAACATTCTTGTACTAAAATCCAGCTGGATGACTTTGTGGAATTGTATTGCAAGTTGAAGAATGAATCATATTTTCTTGCACTCTACCATCTTGACCAGAAAAAGAAAGCTCAAGGTAGTGCTTCTCTTTCTGGTGAGGATGCAACAGAGGCTCTGGATAAGGAAATCCAGAAACTTTATAATGAACTGCCTCAAGACAACATGAGATTAGATCAGTTCCAGTCAGGGAATCCTTCACCAAGAAATGAATGCCTTAACGAACTTCATAAAGCTCTGCAGGAACTGAAGTTCCAAGTCCTTGAGTCAGAATATCAATTATCACAAAGATTGTCCTTGGCAGAGAAGGATTTGATATCGGCAATTGAACTTCTAAGACATGCAGCAGCCATATTAAGGATTCTTAGACTCAGATCAGCTGAGGAGCAATCTAGGTACATTGCTGCATGGTCTCAAATGGTCTCCATATGTGCTGAAGAGCTGAAACATGGCTCTTTAATTTGGATGCAATTATTAGAAAAGAATGTTCAGAAGCAGATGTTATCTGAACCTCGAGGTACTACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

855

Amino Acids

92.61

Weight (kDa)

4.51

Isoelectric Point (pI)

35.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SYNRG_C PF25999 807 - 854 3.3e-11 Synergin gamma, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2184
AarI CACCTGC 1 cut(s) 370
AbsI CCTCGAGG 1 cut(s) 2553
Acc36I ACCTGC 1 cut(s) 370
AccB7I CCANNNNNTGG 1 cut(s) 1295
AccBSI CCGCTC 2 cut(s) 182, 537
AccII CGCG 1 cut(s) 140
AccIII TCCGGA 1 cut(s) 1076
AclWI GGATC 5 cut(s) 263, 276, 433, 1135, 1450
AcoI YGGCCR 1 cut(s) 96
AcuI CTGAAG 3 cut(s) 710, 2309, 2496
AfaI GTAC 6 cut(s) 844, 1771, 1870, 2017, 2438, 2560
AfiI CCNNNNNNNGG 2 cut(s) 1295, 2397
AjnI CCWGG 1 cut(s) 1934
AloI GAACNNNNNNTCC 6 cut(s) 493, 525, 2276, 2277, 2308, 2309
Alw21I GWGCWC 1 cut(s) 674
Alw26I GTCTC 6 cut(s) 24, 49, 1575, 1589, 2457, 2467
AlwI GGATC 5 cut(s) 263, 276, 433, 1135, 1450
AlwNI CAGNNNCTG 2 cut(s) 1439, 2287
Ama87I CYCGRG 1 cut(s) 2553
Aor13HI TCCGGA 1 cut(s) 1076
AoxI GGCC 3 cut(s) 96, 186, 291
AspLEI GCGC 3 cut(s) 142, 236, 247
AspS9I GGNCC 2 cut(s) 187, 1208
AsuC2I CCSGG 3 cut(s) 262, 278, 776
AsuHPI GGTGA 8 cut(s) 394, 629, 974, 1241, 1826, 1925, 2150, 2232
AsuII TTCGAA 3 cut(s) 494, 569, 629
AvaI CYCGRG 1 cut(s) 2553
AvaII GGWCC 1 cut(s) 1208
BaeI ACNNNNGTAYC 2 cut(s) 1668, 1701
BamHI GGATCC 1 cut(s) 268
BanII GRGCYC 1 cut(s) 674
BbsI GAAGAC 2 cut(s) 1248, 1407
Bbv12I GWGCWC 1 cut(s) 674
BbvCI CCTCAGC 1 cut(s) 2421
BccI CCATC 9 cut(s) 325, 605, 734, 1187, 1301, 1507, 1623, 1697, 2100
BceAI ACGGC 4 cut(s) 37, 232, 247, 328
BciT130I CCWGG 1 cut(s) 1936
BciVI GTATCC 2 cut(s) 1075, 1696
BcnI CCSGG 3 cut(s) 262, 278, 776
BcoDI GTCTC 6 cut(s) 24, 49, 1575, 1589, 2457, 2467
BfaI CTAG 2 cut(s) 1592, 2433
BfmI CTRYAG 3 cut(s) 237, 759, 2279
BfoI RGCGCY 2 cut(s) 237, 248
BfuAI ACCTGC 1 cut(s) 370
BfuI GTATCC 2 cut(s) 1075, 1696
BmcAI AGTACT 2 cut(s) 1771, 1870
Bme1390I CCNGG 4 cut(s) 262, 278, 776, 1936
Bme18I GGWCC 1 cut(s) 1208
BmeT110I CYCGRG 1 cut(s) 2553
BmgT120I GGNCC 2 cut(s) 187, 1208
BmiI GGNNCC 1 cut(s) 270
BmrFI CCNGG 4 cut(s) 262, 278, 776, 1936
BpiI GAAGAC 2 cut(s) 1248, 1407
BpmI CTGGAG 1 cut(s) 897
Bpu10I CCTNAGC 2 cut(s) 1152, 2421
Bpu14I TTCGAA 3 cut(s) 494, 569, 629
BpuEI CTTGAG 5 cut(s) 990, 1472, 2100, 2181, 2324
BpuMI CCSGG 3 cut(s) 262, 278, 776
BsaI GGTCTC 2 cut(s) 2457, 2467
BsaJI CCNNGG 2 cut(s) 1935, 2337
BsaWI WCCGGW 2 cut(s) 1076, 1375
BsaXI ACNNNNNCTCC 2 cut(s) 433, 463
Bsc4I CCNNNNNNNGG 2 cut(s) 1295, 2397
Bse1I ACTGG 7 cut(s) 880, 889, 1129, 1252, 1332, 1473, 2224
Bse3DI GCAATG 3 cut(s) 790, 1057, 2439
BseAI TCCGGA 1 cut(s) 1076
BseBI CCWGG 1 cut(s) 1936
BseDI CCNNGG 2 cut(s) 1935, 2337
BseLI CCNNNNNNNGG 2 cut(s) 1295, 2397
BseMI GCAATG 3 cut(s) 790, 1057, 2439
BseMII CTCAG 6 cut(s) 390, 1332, 1623, 1646, 2412, 2425
BseNI ACTGG 7 cut(s) 880, 889, 1129, 1252, 1332, 1473, 2224
BseRI GAGGAG 2 cut(s) 380, 2438
BseX3I CGGCCG 1 cut(s) 96
BseYI CCCAGC 1 cut(s) 1229
Bsh1236I CGCG 1 cut(s) 140
Bsh1285I CGRYCG 1 cut(s) 99
BshFI GGCC 3 cut(s) 98, 188, 293
BsiEI CGRYCG 1 cut(s) 99
BsiHKAI GWGCWC 1 cut(s) 674
BsiHKCI CYCGRG 1 cut(s) 2553
BsiSI CCGG 6 cut(s) 185, 261, 277, 775, 1077, 1376
BslI CCNNNNNNNGG 2 cut(s) 1295, 2397
BsmAI GTCTC 6 cut(s) 24, 49, 1575, 1589, 2457, 2467
BsmBI CGTCTC 2 cut(s) 49, 1575
BsmI GAATGC 1 cut(s) 2258
BsnI GGCC 3 cut(s) 98, 188, 293
Bso31I GGTCTC 2 cut(s) 2457, 2467
BsoBI CYCGRG 1 cut(s) 2553
Bsp119I TTCGAA 3 cut(s) 494, 569, 629
Bsp1286I GDGCHC 1 cut(s) 674
Bsp13I TCCGGA 1 cut(s) 1076
BspANI GGCC 3 cut(s) 98, 188, 293
BspCNI CTCAG 6 cut(s) 391, 1331, 1622, 1645, 2413, 2424
BspEI TCCGGA 1 cut(s) 1076
BspFNI CGCG 1 cut(s) 140
BspHI TCATGA 1 cut(s) 910
BspLI GGNNCC 1 cut(s) 270
BspMAI CTGCAG 3 cut(s) 241, 763, 2283
BspMI ACCTGC 1 cut(s) 370
BspPI GGATC 5 cut(s) 263, 276, 433, 1135, 1450
BspQI GCTCTTC 1 cut(s) 2472
BspT104I TTCGAA 3 cut(s) 494, 569, 629
BspTNI GGTCTC 2 cut(s) 2457, 2467
BsrBI CCGCTC 2 cut(s) 182, 537
BsrDI GCAATG 3 cut(s) 790, 1057, 2439
BsrI ACTGG 7 cut(s) 880, 889, 1129, 1252, 1332, 1473, 2224
BssECI CCNNGG 2 cut(s) 1935, 2337
BssT1I CCWWGG 1 cut(s) 2337
Bst2UI CCWGG 1 cut(s) 1936
Bst4CI ACNGT 7 cut(s) 133, 491, 1063, 1529, 1718, 1792, 1891
Bst6I CTCTTC 2 cut(s) 357, 2472
BstBI TTCGAA 3 cut(s) 494, 569, 629
BstC8I GCNNGC 2 cut(s) 1043, 1557
BstFNI CGCG 1 cut(s) 140
BstH2I RGCGCY 2 cut(s) 237, 248
BstHHI GCGC 3 cut(s) 142, 236, 247
BstMAI GTCTC 6 cut(s) 24, 49, 1575, 1589, 2457, 2467
BstMCI CGRYCG 1 cut(s) 99
BstMWI GCNNNNNNNGC 6 cut(s) 56, 242, 1047, 1157, 1166, 2153
BstNI CCWGG 1 cut(s) 1936
BstNSI RCATGY 1 cut(s) 2384
BstSCI CCNGG 4 cut(s) 260, 276, 774, 1934
BstSFI CTRYAG 3 cut(s) 237, 759, 2279
BstUI CGCG 1 cut(s) 140
BstV2I GAAGAC 2 cut(s) 1248, 1407
BstX2I RGATCY 2 cut(s) 268, 1442
BstYI RGATCY 2 cut(s) 268, 1442
BstZI CGGCCG 1 cut(s) 96
BsuI GTATCC 2 cut(s) 1075, 1696
BsuRI GGCC 3 cut(s) 98, 188, 293
BtsI GCAGTG 1 cut(s) 323
BtsIMutI CAGTG 6 cut(s) 323, 1339, 1534, 1692, 1797, 1896
BveI ACCTGC 1 cut(s) 370
Cac8I GCNNGC 2 cut(s) 1043, 1557
CaiI CAGNNNCTG 2 cut(s) 1439, 2287
CciI TCATGA 1 cut(s) 910
CfoI GCGC 3 cut(s) 142, 236, 247
Cfr13I GGNCC 2 cut(s) 187, 1208
Csp6I GTAC 6 cut(s) 843, 1770, 1869, 2016, 2437, 2559
CviAII CATG 6 cut(s) 911, 953, 2206, 2381, 2448, 2489
CviQI GTAC 6 cut(s) 843, 1770, 1869, 2016, 2437, 2559
EaeI YGGCCR 1 cut(s) 96
EagI CGGCCG 1 cut(s) 96
Eam1104I CTCTTC 2 cut(s) 357, 2472
EarI CTCTTC 2 cut(s) 357, 2472
EciI GGCGGA 2 cut(s) 20, 37
Ecl136II GAGCTC 1 cut(s) 672
EclXI CGGCCG 1 cut(s) 96
Eco130I CCWWGG 1 cut(s) 2337
Eco24I GRGCYC 1 cut(s) 674
Eco31I GGTCTC 2 cut(s) 2457, 2467
Eco32I GATATC 2 cut(s) 468, 2358
Eco47I GGWCC 1 cut(s) 1208
Eco52I CGGCCG 1 cut(s) 96
Eco53kI GAGCTC 1 cut(s) 672
Eco57I CTGAAG 3 cut(s) 710, 2309, 2496
Eco88I CYCGRG 1 cut(s) 2553
EcoICRI GAGCTC 1 cut(s) 672
EcoRI GAATTC 3 cut(s) 502, 749, 790
EcoRII CCWGG 1 cut(s) 1934
EcoRV GATATC 2 cut(s) 468, 2358
EcoT14I CCWWGG 1 cut(s) 2337
EcoT22I ATGCAT 3 cut(s) 1429, 1779, 1878
EcoT38I GRGCYC 1 cut(s) 674
ErhI CCWWGG 1 cut(s) 2337
Esp3I CGTCTC 2 cut(s) 49, 1575
FaeI CATG 6 cut(s) 914, 956, 2209, 2384, 2451, 2492
FalI AAGNNNNNCTT 2 cut(s) 1986, 2018
FatI CATG 6 cut(s) 910, 952, 2205, 2380, 2447, 2488
FauI CCCGC 2 cut(s) 187, 530
FauNDI CATATG 1 cut(s) 2468
FriOI GRGCYC 1 cut(s) 674
FspBI CTAG 2 cut(s) 1592, 2433
GlaI GCGC 3 cut(s) 141, 235, 246
GsaI CCCAGC 1 cut(s) 1233
GsuI CTGGAG 1 cut(s) 897
HaeII RGCGCY 2 cut(s) 237, 248
HaeIII GGCC 3 cut(s) 98, 188, 293
HapII CCGG 6 cut(s) 185, 261, 277, 775, 1077, 1376
HhaI GCGC 3 cut(s) 142, 236, 247
Hin1II CATG 6 cut(s) 914, 956, 2209, 2384, 2451, 2492
Hin6I GCGC 3 cut(s) 140, 234, 245
HinP1I GCGC 3 cut(s) 140, 234, 245
HincII GTYRAC 2 cut(s) 166, 252
HindII GTYRAC 2 cut(s) 166, 252
HindIII AAGCTT 4 cut(s) 572, 1448, 1557, 1708
HpaI GTTAAC 2 cut(s) 166, 252
HpaII CCGG 6 cut(s) 185, 261, 277, 775, 1077, 1376
HphI GGTGA 8 cut(s) 394, 629, 974, 1241, 1826, 1925, 2150, 2232
Hpy166II GTNNAC 4 cut(s) 166, 252, 845, 853
Hpy8I GTNNAC 4 cut(s) 166, 252, 845, 853
Hpy99I CGWCG 8 cut(s) 14, 17, 20, 23, 110, 113, 137, 164
HpyAV CCTTC 6 cut(s) 70, 283, 290, 701, 2247, 2341
HpyCH4III ACNGT 7 cut(s) 133, 491, 1063, 1529, 1718, 1792, 1891
HpyCH4IV ACGT 2 cut(s) 222, 254
HpyF10VI GCNNNNNNNGC 6 cut(s) 56, 242, 1047, 1157, 1166, 2153
HpySE526I ACGT 2 cut(s) 222, 254
Hsp92II CATG 6 cut(s) 914, 956, 2209, 2384, 2451, 2492
HspAI GCGC 3 cut(s) 140, 234, 245
Kpn2I TCCGGA 1 cut(s) 1076
KspAI GTTAAC 2 cut(s) 166, 252
LguI GCTCTTC 1 cut(s) 2472
LmnI GCTCC 4 cut(s) 187, 335, 669, 2425
MaeI CTAG 2 cut(s) 1592, 2433
MaeII ACGT 2 cut(s) 222, 254
MaeIII GTNAC 7 cut(s) 127, 223, 1000, 1354, 1534, 1783, 1882
MbiI CCGCTC 2 cut(s) 182, 537
MfeI CAATTG 1 cut(s) 2364
MflI RGATCY 2 cut(s) 268, 1442
MhlI GDGCHC 1 cut(s) 674
MlyI GAGTC 7 cut(s) 833, 1403, 1793, 1892, 1925, 2315, 2403
MmeI TCCRAC 4 cut(s) 129, 246, 1122, 1215
Mph1103I ATGCAT 3 cut(s) 1429, 1779, 1878
MroI TCCGGA 1 cut(s) 1076
MseI TTAA 9 cut(s) 165, 251, 918, 1419, 1944, 2004, 2259, 2396, 2498
MslI CAYNNNNRTG 1 cut(s) 957
MspA1I CMGCKG 3 cut(s) 1640, 2029, 2420
MspI CCGG 6 cut(s) 185, 261, 277, 775, 1077, 1376
MspR9I CCNGG 4 cut(s) 262, 278, 776, 1936
MunI CAATTG 1 cut(s) 2364
Mva1269I GAATGC 1 cut(s) 2258
MvaI CCWGG 1 cut(s) 1936
MvnI CGCG 1 cut(s) 140
MwoI GCNNNNNNNGC 6 cut(s) 56, 242, 1047, 1157, 1166, 2153
NciI CCSGG 3 cut(s) 262, 278, 776
NdeI CATATG 1 cut(s) 2468
NlaIII CATG 6 cut(s) 914, 956, 2209, 2384, 2451, 2492
NlaIV GGNNCC 1 cut(s) 270
NmuCI GTSAC 2 cut(s) 1783, 1882
NsiI ATGCAT 3 cut(s) 1429, 1779, 1878
NspI RCATGY 1 cut(s) 2384
NspV TTCGAA 3 cut(s) 494, 569, 629
PaeR7I CTCGAG 1 cut(s) 2553
PagI TCATGA 1 cut(s) 910
PaqCI CACCTGC 1 cut(s) 370
PciSI GCTCTTC 1 cut(s) 2472
PcsI WCGNNNNNNNCGW 2 cut(s) 15, 117
PctI GAATGC 1 cut(s) 2258
PflMI CCANNNNNTGG 1 cut(s) 1295
PleI GAGTC 7 cut(s) 832, 1402, 1793, 1892, 1925, 2314, 2403
PpsI GAGTC 7 cut(s) 832, 1402, 1793, 1892, 1925, 2314, 2403
PsiI TTATAA 1 cut(s) 2184
Psp124BI GAGCTC 1 cut(s) 674
Psp6I CCWGG 1 cut(s) 1934
PspFI CCCAGC 1 cut(s) 1229
PspGI CCWGG 1 cut(s) 1934
PspN4I GGNNCC 1 cut(s) 270
PspPI GGNCC 2 cut(s) 187, 1208
PspXI VCTCGAGB 1 cut(s) 2553
PstI CTGCAG 3 cut(s) 241, 763, 2283
PstNI CAGNNNCTG 2 cut(s) 1439, 2287
PsuI RGATCY 2 cut(s) 268, 1442
PvuII CAGCTG 3 cut(s) 1640, 2029, 2420
RsaI GTAC 6 cut(s) 844, 1771, 1870, 2017, 2438, 2560
RsaNI GTAC 6 cut(s) 843, 1770, 1869, 2016, 2437, 2559
RseI CAYNNNNRTG 1 cut(s) 957
SacI GAGCTC 1 cut(s) 674
SapI GCTCTTC 1 cut(s) 2472
SaqAI TTAA 9 cut(s) 165, 251, 918, 1419, 1944, 2004, 2259, 2396, 2498
Sau96I GGNCC 2 cut(s) 187, 1208
ScaI AGTACT 2 cut(s) 1771, 1870
SchI GAGTC 7 cut(s) 833, 1403, 1793, 1892, 1925, 2315, 2403
ScrFI CCNGG 4 cut(s) 262, 278, 776, 1936
SduI GDGCHC 1 cut(s) 674
SfcI CTRYAG 3 cut(s) 237, 759, 2279
Sfr274I CTCGAG 1 cut(s) 2553
SfuI TTCGAA 3 cut(s) 494, 569, 629
SinI GGWCC 1 cut(s) 1208
SlaI CTCGAG 1 cut(s) 2553
SmiMI CAYNNNNRTG 1 cut(s) 957
SmlI CTYRAG 6 cut(s) 1005, 1451, 2115, 2196, 2303, 2553
SmoI CTYRAG 6 cut(s) 1005, 1451, 2115, 2196, 2303, 2553
SspMI CTAG 2 cut(s) 1592, 2433
SstI GAGCTC 1 cut(s) 674
StyD4I CCNGG 4 cut(s) 260, 276, 774, 1934
StyI CCWWGG 1 cut(s) 2337
TaaI ACNGT 7 cut(s) 133, 491, 1063, 1529, 1718, 1792, 1891
TaiI ACGT 2 cut(s) 225, 257
TaqI TCGA 9 cut(s) 282, 428, 470, 494, 554, 569, 629, 1034, 2554
TatI WGTACW 4 cut(s) 842, 1769, 1868, 2015
TauI GCSGC 5 cut(s) 53, 56, 59, 101, 140
Tru1I TTAA 9 cut(s) 165, 251, 918, 1419, 1944, 2004, 2259, 2396, 2498
Tru9I TTAA 9 cut(s) 165, 251, 918, 1419, 1944, 2004, 2259, 2396, 2498
TscAI CASTG 6 cut(s) 323, 1339, 1534, 1699, 1797, 1896
TseFI GTSAC 2 cut(s) 1783, 1882
Tsp45I GTSAC 2 cut(s) 1783, 1882
TspGWI ACGGA 1 cut(s) 183
TspRI CASTG 6 cut(s) 323, 1339, 1534, 1699, 1797, 1896
Van91I CCANNNNNTGG 1 cut(s) 1295
VpaK11BI GGWCC 1 cut(s) 1208
XceI RCATGY 1 cut(s) 2384
XhoI CTCGAG 1 cut(s) 2553
XspI CTAG 2 cut(s) 1592, 2433
ZrmI AGTACT 2 cut(s) 1771, 1870
Zsp2I ATGCAT 3 cut(s) 1429, 1779, 1878
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.