AT1G56510

negative regulation of Rho guanyl-nucleotide exchange factor activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0001561
Physical Location & Seq
Forward (+)
21167565 .. 21173632
6068 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G56510.1

Sequence Viewer

Length: 3024 bp
ATGGCTTCTTCTTCTTCCTCACCTCGCAACTGGAGATACAATGTCTTCACGAGCTTCCATGGACCAGACGTCCGTATTAAATTTCTCAGTCATTTACGTCAACAGTTTGTCTACAATGGAATTACAATGTTCGATGACAACGGGATCGAAAGAAGCCAAATTATCGCTCCAGCTCTCAAAAAAGCCATTGGAGAATCAAGGGTCGCGATTGTATTGCTCTCGAAGAACTATGCTTCTTCCAGTTGGTGTTTGGATGAGCTATTGGAGATTTTAAAGTGCAAAGAATATATAGGACAAATAGTGATGACTGTCTTCTACGAAGTTGATCCTTCTCACGTGCGCAAACAAACCGGAGATTTTGGGATTGCTTTCAAAGAAACTTGTGCTCATAAAACAGAGGAGGAGAGGAGCAAATGGAGCCAAGCTTTGACCTATGTGGGCAACATAGCCGGAGAAGACTTCATACACTGGAAAGATGAAGCAAAAATGATAGAGAAGATAGCAAGAGATGTTTCGACTAAAATAAATGTCACACCGTGTCGGGATTTTGATGACATGGTTGGACTAGAAAGACATTTGAAGGAAATGGTGTCTTTGCTAGATTTAGACAAAGAAGGAGTTAAGATGGTTGGAATCTCTGGTCCTGCAGGCATTGGTAAGAGTACCATTGCCAAAGCTTTACATAGTCGACACTCTAGTACGTTTCAACATAATTGTTTTGTGGACAATCTTTGGGAAAACTATAAGATTTGTACTGGTGAGCATGGTGTGAAGTTGCGCTTACATGAGCAATTTGTTTCAAAAATTTTGAAACAAAATGGTTTGGAACTAACTCATTTAAGTGTGATAAAAGATAGGCTACAAGACAAGAAGGTTCTTATCATTCTTGATGATGTGGAGAGTTTAGCTCAACTTGAGACTTTGGCTGATATGACGTGGTTTGGTCCTGGAAGTAGGGTCATAGTAACGACTGAAAACAAAGAGATTTTGCAGCAACATGGTATCGGTGATATATACCAAGTTGGATATCCATCAGAAAGCGAAGCACTAACGATCTTCTGTCTATCTGCTTTTAAACAAGCCTCTCCACCTGATGGGTTTATGGATCTTGCGGATGAAGTTGTAAGAATTTGTGATAAGCTTCCATTGGCTCTGTGTGTTTTAGGGTCGTCATTGCTGCGAAAGAGCCAGACTGACTGGGAGGATGAACTGCCAAGGTTGAGAAACTGTCTTGACGGAATTGAGAGTGTATTGAAAGTGGGCTTTGAGAGTTTAAATGAGAAAGACCAAGCTCTATTTCTCTACATTACAGTCTTCTTCAATTATGAATGTGCTGATCATGTGACGTTGATGCTAGCGAAATCTAACTTGAATGTTAGACTTGGGTTGAAAAACCTAGCTAATAGGTATCTCATACATATAGATCACGACCAAAAAAAAAGAGTGGTAGTGCATCGTTTGCTACGAGTAATGGCTATACAAGTTTGTACCAAACAAAAGCCTTGGAAAAGCCAGATTCTAGTAGATGCCGAAAAGATAGCTTATGTTCTTGAAGAAGCAACGGGTAATCGATCTATTAAAGGTGTATCATTTGACACAGCGGAGATCGACGAATTAATGATAAGCCCAAAGGCTTTTGAAAAAATGTGCAATCTTTTGTTCCTGAAAGTCTACGATGCGGGGTGGCATACCGGAAAAAGAAAATTGGACATTCCAGAGGATATTAAGTTTCCACGTACCATACGGTTATTTCATTGGGATGCCTACTCAGGAAAGAGGCTTCCTAGTAGCTTTTTTGCAGAAAATCTTGTTGAAGTCAATATGCAAGATAGCGAGCTCCAGAAGCTATGGGAAGGAACTCAGTGCCTTGCCAATCTCAAGAAGATAGATCTTTCAAGGTCATCTTGTTTGACGGAACTTCCAGATCTTTCAAATGCTACAAATCTGGAGGACTTGTATGTGGGTTCTTGCACTGCTTTGGTAGAGCTTCCATCTTCGATTGGGAATCTTCATAAACTAGCTCATATAATGATGTATTCTTGCGAAAGTCTAGAAGTCATTCCATCTCTCATCAACTTGACATCTCTTACCTTCCTCAACATGAATAAATGCTCAAGATTGAGAAGATTCCCAGATATCCCCACCAGCATAGAGGACGTCCAAGTAACAGGTACAACTCTAGAGGAATTGCCTGCATCACTTACGCATTGCTCTGGTCTTCAGACTATTAAGATAAGTGGAAGTGTAAATCTCAAGATCTTCTACACAGAGCTCCCCGTGAGTGTAAGCCATATAAATATAAGCAACAGTGGTATTGAGTGGATTACAGAAGATTGCATCAAAGGTCTTCATAATCTACACGACCTTTGTCTATCAGGCTGCAAAAGACTCGTGTCACTGCCAGAGCTTCCTCGTTCGCTGAAAATTCTACAAGCAGACGATTGTGATTCACTAGAGAGTTTAAATGGCCATTTAAACACTCCAAATGCAGAGCTATATTTCGCTAACTGCTTCAAATTGGATGCAGAAGCACGACGAGCGATAATTCAGCAATCGTTTGTTAGCGGGTGGGCTCTCTTACCAGGATTAGAAGTACCTCCAGAGTTCGGCCACCGAGCCAGAGGAAATTCCTTAATAATTCCTTATTCTGCTTCCAACAGATTTAAGGTTTGTGTCGTGATGTCACTTAACCATCATCAACCCTTCGAATTAGTTCCTAGAAACCTATTATATCGTTGGACAGTCATAGGCGACTCAGTGAGCTCTGATGAAAAGACGTTTCACCTTTCACATATGTTCAACGCCGACTCAGTGAACTCCAAGTTACAAAAGCCACATCTGTTCATATTTCACTCTTGCTTGCCATTCATATTTCACTCGTGCTTGCCATTCATATTTGACATTAGCAATATAATGCTCGAATTCAGCAGCGAATACAAAGATTTCGACATCCTTGAATGTGGTGTTCAGATCTTGACGGATGAAACAGATGAAAGAAACATTTGGGGTTCTCTAGTATTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002682 GO:0002683 GO:0002684 GO:0002685 GO:0002686 GO:0002687 GO:0002688 GO:0002690 GO:0002691 GO:0002693 GO:0002694 GO:0002695 GO:0003008 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0007162 GO:0007275 GO:0007517 GO:0007519 GO:0007600 GO:0007605 GO:0008150 GO:0009888 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010646 GO:0010648 GO:0010830 GO:0010831 GO:0014706 GO:0014902 GO:0014904 GO:0022407 GO:0022408 GO:0022603 GO:0023051 GO:0023057 GO:0030154 GO:0030155 GO:0030175 GO:0030334 GO:0030335 GO:0030336 GO:0031344 GO:0031346 GO:0032091 GO:0032101 GO:0032103 GO:0032501 GO:0032502 GO:0032878 GO:0032879 GO:0032880 GO:0034097 GO:0035023 GO:0035024 GO:0040012 GO:0040013 GO:0040017 GO:0042221 GO:0042692 GO:0042995 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043393 GO:0044087 GO:0044089 GO:0044092 GO:0044093 GO:0044424 GO:0044464 GO:0045595 GO:0045597 GO:0045661 GO:0045663 GO:0046578 GO:0046580 GO:0048468 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0048731 GO:0048741 GO:0048747 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050863 GO:0050865 GO:0050866 GO:0050868 GO:0050877 GO:0050896 GO:0050920 GO:0050921 GO:0050954 GO:0051056 GO:0051058 GO:0051094 GO:0051098 GO:0051099 GO:0051100 GO:0051128 GO:0051130 GO:0051146 GO:0051147 GO:0051149 GO:0051153 GO:0051155 GO:0051249 GO:0051250 GO:0051270 GO:0051271 GO:0051272 GO:0051489 GO:0051491 GO:0051716 GO:0055001 GO:0055002 GO:0060142 GO:0060143 GO:0060341 GO:0060491 GO:0060537 GO:0060538 GO:0061061 GO:0065007 GO:0065009 GO:0070887 GO:0071310 GO:0071345 GO:0071622 GO:0071624 GO:0071889 GO:0090022 GO:0090023 GO:0098858 GO:0120025 GO:0120032 GO:0120034 GO:0120035 GO:1901739 GO:1901741 GO:1902531 GO:1902532 GO:1902622 GO:1902624 GO:1903037 GO:1903038 GO:1903827 GO:1903828 GO:1903903 GO:1903904 GO:1904424 GO:1904475 GO:1904476 GO:1905097 GO:1905098 GO:1905871 GO:1905872 GO:1990868 GO:1990869 GO:2000114 GO:2000145 GO:2000146 GO:2000147 GO:2000389 GO:2000391 GO:2000401 GO:2000402 GO:2000404 GO:2000405 GO:2001106 GO:2001107
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 NB-ARC PL48 TIR

Protein Analysis

1007

Amino Acids

113.98

Weight (kDa)

5.96

Isoelectric Point (pI)

45.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 13 - 188 9.2e-56 TIR domain
TIR_2 PF13676 15 - 110 2.1e-08 TIR domain
NB-ARC PF00931 196 - 360 8.8e-14 NB-ARC domain
WHD_ROQ1 PF23282 426 - 492 3.5e-11 Disease resistance protein Roq1-like, winged-helix domain
LRR_3 PF07725 602 - 621 1.4e-07 Leucine Rich Repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 72, 2160
Acc16I TGCGCA 1 cut(s) 341
AccB7I CCANNNNNTGG 1 cut(s) 1094
AccI GTMKAC 3 cut(s) 111, 688, 1671
AccII CGCG 1 cut(s) 206
AciI CCGC 4 cut(s) 1112, 1601, 1679, 2565
AclWI GGATC 3 cut(s) 152, 320, 1113
AcoI YGGCCR 2 cut(s) 2467, 2608
AcsI RAATTY 6 cut(s) 80, 804, 1128, 2424, 2626, 2921
AcuI CTGAAG 1 cut(s) 2204
AcvI CACGTG 1 cut(s) 337
AcyI GRCGYC 2 cut(s) 69, 2157
AdeI CACNNNGTG 1 cut(s) 537
AfaI GTAC 7 cut(s) 664, 700, 754, 1489, 1738, 2173, 2595
AfiI CCNNNNNNNGG 2 cut(s) 1094, 2606
AhdI GACNNNNNGTC 1 cut(s) 68
AjiI CACGTC 1 cut(s) 936
AjnI CCWGG 2 cut(s) 946, 2581
AjuI GAANNNNNNNTTGG 2 cut(s) 1281, 1313
Alw21I GWGCWC 4 cut(s) 388, 1839, 2274, 2765
Alw26I GTCTC 1 cut(s) 911
AlwI GGATC 3 cut(s) 152, 320, 1113
AoxI GGCC 2 cut(s) 2467, 2608
ApeKI GCWGC 4 cut(s) 991, 1177, 2379, 2928
ApoI RAATTY 6 cut(s) 80, 804, 1128, 2424, 2626, 2921
AseI ATTAAT 1 cut(s) 1616
Asp700I GAANNNNTTC 2 cut(s) 2058, 2712
AspLEI GCGC 2 cut(s) 342, 780
AspS9I GGNCC 3 cut(s) 62, 641, 944
AsuHPI GGTGA 4 cut(s) 12, 770, 1019, 2774
AsuII TTCGAA 1 cut(s) 2706
AsuNHI GCTAGC 1 cut(s) 1354
AvaII GGWCC 3 cut(s) 62, 641, 944
BalI TGGCCA 1 cut(s) 2469
BanII GRGCYC 4 cut(s) 1839, 2274, 2575, 2765
BarI GAAGNNNNNNTAC 2 cut(s) 447, 479
BauI CACGAG 3 cut(s) 49, 2390, 2878
BbrPI CACGTG 1 cut(s) 337
BbsI GAAGAC 6 cut(s) 37, 304, 462, 1306, 2210, 2339
Bbv12I GWGCWC 4 cut(s) 388, 1839, 2274, 2765
BbvI GCAGC 4 cut(s) 1003, 1164, 2366, 2940
BccI CCATC 6 cut(s) 619, 1039, 1088, 1999, 2071, 2700
BcgI CGANNNNNNTGC 4 cut(s) 196, 230, 2371, 2405
BciT130I CCWGG 2 cut(s) 948, 2583
BclI TGATCA 1 cut(s) 1336
BcoDI GTCTC 1 cut(s) 911
BfmI CTRYAG 1 cut(s) 645
BglII AGATCT 4 cut(s) 1888, 1924, 2256, 2970
BisI GCNGC 4 cut(s) 992, 1178, 2380, 2929
BlsI GCNGC 4 cut(s) 993, 1179, 2381, 2930
Bme1390I CCNGG 2 cut(s) 948, 2583
Bme18I GGWCC 3 cut(s) 62, 641, 944
BmeRI GACNNNNNGTC 1 cut(s) 68
BmgBI CACGTC 1 cut(s) 936
BmgT120I GGNCC 3 cut(s) 62, 641, 944
BmiI GGNNCC 1 cut(s) 419
BmrFI CCNGG 2 cut(s) 948, 2583
BmrI ACTGGG 1 cut(s) 1207
BmsI GCATC 8 cut(s) 1341, 1462, 1516, 1666, 1750, 2204, 2346, 2512
BmtI GCTAGC 1 cut(s) 1358
BmuI ACTGGG 1 cut(s) 1207
BoxI GACNNNNGTC 2 cut(s) 2367, 2392
BpiI GAAGAC 6 cut(s) 37, 304, 462, 1306, 2210, 2339
BplI GAGNNNNNCTC 2 cut(s) 892, 924
BpmI CTGGAG 5 cut(s) 52, 153, 1823, 1967, 2583
Bpu14I TTCGAA 1 cut(s) 2706
BpuEI CTTGAG 4 cut(s) 935, 1862, 2098, 2237
Bsa29I ATCGAT 1 cut(s) 1570
BsaAI YACGTR 2 cut(s) 337, 1736
BsaBI GATNNNNATC 1 cut(s) 1030
BsaHI GRCGYC 2 cut(s) 69, 2157
BsaJI CCNNGG 3 cut(s) 58, 1214, 1502
BsaWI WCCGGW 2 cut(s) 350, 1691
BsaXI ACNNNNNCTCC 2 cut(s) 1940, 1970
Bsc4I CCNNNNNNNGG 2 cut(s) 1094, 2606
Bse1I ACTGG 5 cut(s) 35, 240, 473, 760, 1202
Bse3DI GCAATG 3 cut(s) 666, 1172, 2206
Bse8I GATNNNNATC 1 cut(s) 1030
BseBI CCWGG 2 cut(s) 948, 2583
BseCI ATCGAT 1 cut(s) 1570
BseDI CCNNGG 3 cut(s) 58, 1214, 1502
BseGI GGATG 7 cut(s) 259, 1120, 1210, 1765, 2527, 2949, 2986
BseJI GATNNNNATC 1 cut(s) 1030
BseLI CCNNNNNNNGG 2 cut(s) 1094, 2606
BseMI GCAATG 3 cut(s) 666, 1172, 2206
BseMII CTCAG 5 cut(s) 100, 1782, 1874, 2769, 2823
BseNI ACTGG 5 cut(s) 35, 240, 473, 760, 1202
BseRI GAGGAG 3 cut(s) 413, 416, 421
BseXI GCAGC 4 cut(s) 1003, 1164, 2366, 2940
Bsh1236I CGCG 1 cut(s) 206
BshFI GGCC 2 cut(s) 2469, 2610
BshVI ATCGAT 1 cut(s) 1570
BsiHKAI GWGCWC 4 cut(s) 388, 1839, 2274, 2765
BsiSI CCGG 3 cut(s) 351, 450, 1692
BslI CCNNNNNNNGG 2 cut(s) 1094, 2606
BsmAI GTCTC 1 cut(s) 911
BsnI GGCC 2 cut(s) 2469, 2610
Bsp119I TTCGAA 1 cut(s) 2706
Bsp1286I GDGCHC 5 cut(s) 388, 1839, 2274, 2575, 2765
Bsp19I CCATGG 1 cut(s) 58
Bsp68I TCGCGA 1 cut(s) 206
BspACI CCGC 4 cut(s) 1112, 1601, 1679, 2565
BspANI GGCC 2 cut(s) 2469, 2610
BspCNI CTCAG 5 cut(s) 99, 1781, 1873, 2768, 2822
BspDI ATCGAT 1 cut(s) 1570
BspFNI CGCG 1 cut(s) 206
BspLI GGNNCC 1 cut(s) 419
BspMAI CTGCAG 1 cut(s) 649
BspOI GCTAGC 1 cut(s) 1358
BspPI GGATC 3 cut(s) 152, 320, 1113
BspT104I TTCGAA 1 cut(s) 2706
BsrDI GCAATG 3 cut(s) 666, 1172, 2206
BsrI ACTGG 5 cut(s) 35, 240, 473, 760, 1202
BssECI CCNNGG 3 cut(s) 58, 1214, 1502
BssNI GRCGYC 2 cut(s) 69, 2157
BssSI CACGAG 3 cut(s) 49, 2390, 2878
BssT1I CCWWGG 3 cut(s) 58, 1214, 1502
Bst2BI CACGAG 3 cut(s) 49, 2390, 2878
Bst2UI CCWGG 2 cut(s) 948, 2583
Bst4CI ACNGT 8 cut(s) 105, 310, 537, 1229, 1312, 1746, 2309, 2743
BstACI GRCGYC 2 cut(s) 69, 2157
BstAPI GCANNNNNTGC 1 cut(s) 1459
BstBAI YACGTR 2 cut(s) 337, 1736
BstBI TTCGAA 1 cut(s) 2706
BstC8I GCNNGC 6 cut(s) 649, 1356, 1835, 2193, 2861, 2885
BstDEI CTNAG 5 cut(s) 86, 1768, 1860, 2755, 2809
BstDSI CCRYGG 1 cut(s) 58
BstF5I GGATG 7 cut(s) 259, 1120, 1210, 1765, 2527, 2949, 2986
BstFNI CGCG 1 cut(s) 206
BstHHI GCGC 2 cut(s) 342, 780
BstMAI GTCTC 1 cut(s) 911
BstMWI GCNNNNNNNGC 4 cut(s) 417, 1459, 1843, 2537
BstNI CCWGG 2 cut(s) 948, 2583
BstPAI GACNNNNGTC 2 cut(s) 2367, 2392
BstSCI CCNGG 2 cut(s) 946, 2581
BstSFI CTRYAG 1 cut(s) 645
BstUI CGCG 1 cut(s) 206
BstV1I GCAGC 4 cut(s) 1003, 1164, 2366, 2940
BstV2I GAAGAC 6 cut(s) 37, 304, 462, 1306, 2210, 2339
BstX2I RGATCY 5 cut(s) 1105, 1888, 1924, 2256, 2970
BstYI RGATCY 5 cut(s) 1105, 1888, 1924, 2256, 2970
Bsu15I ATCGAT 1 cut(s) 1570
BsuRI GGCC 2 cut(s) 2469, 2610
BsuTUI ATCGAT 1 cut(s) 1570
BtgI CCRYGG 1 cut(s) 58
BtrI CACGTC 1 cut(s) 936
BtsCI GGATG 7 cut(s) 259, 1120, 1210, 1765, 2527, 2949, 2986
BtsI GCAGTG 2 cut(s) 1971, 2396
BtsIMutI CAGTG 7 cut(s) 466, 1868, 1971, 2314, 2396, 2763, 2817
BtuMI TCGCGA 1 cut(s) 206
Cac8I GCNNGC 6 cut(s) 649, 1356, 1835, 2193, 2861, 2885
CfoI GCGC 2 cut(s) 342, 780
Cfr13I GGNCC 3 cut(s) 62, 641, 944
ClaI ATCGAT 1 cut(s) 1570
Csp6I GTAC 7 cut(s) 663, 699, 753, 1488, 1737, 2172, 2594
CviAII CATG 7 cut(s) 59, 556, 764, 785, 998, 1340, 2101
CviQI GTAC 7 cut(s) 663, 699, 753, 1488, 1737, 2172, 2594
DdeI CTNAG 5 cut(s) 86, 1768, 1860, 2755, 2809
DraI TTTAAA 5 cut(s) 273, 1075, 1275, 2463, 2475
DraIII CACNNNGTG 1 cut(s) 537
DriI GACNNNNNGTC 1 cut(s) 68
EaeI YGGCCR 2 cut(s) 2467, 2608
Eam1105I GACNNNNNGTC 1 cut(s) 68
Ecl136II GAGCTC 3 cut(s) 1837, 2272, 2763
Eco130I CCWWGG 3 cut(s) 58, 1214, 1502
Eco24I GRGCYC 4 cut(s) 1839, 2274, 2575, 2765
Eco32I GATATC 2 cut(s) 1028, 2137
Eco47I GGWCC 3 cut(s) 62, 641, 944
Eco53kI GAGCTC 3 cut(s) 1837, 2272, 2763
Eco57I CTGAAG 1 cut(s) 2204
Eco72I CACGTG 1 cut(s) 337
EcoICRI GAGCTC 3 cut(s) 1837, 2272, 2763
EcoRI GAATTC 1 cut(s) 2921
EcoRII CCWGG 2 cut(s) 946, 2581
EcoRV GATATC 2 cut(s) 1028, 2137
EcoT14I CCWWGG 3 cut(s) 58, 1214, 1502
EcoT38I GRGCYC 4 cut(s) 1839, 2274, 2575, 2765
ErhI CCWWGG 3 cut(s) 58, 1214, 1502
FaeI CATG 7 cut(s) 62, 559, 767, 788, 1001, 1343, 2104
FalI AAGNNNNNCTT 4 cut(s) 764, 796, 1888, 1920
FatI CATG 7 cut(s) 58, 555, 763, 784, 997, 1339, 2100
FauI CCCGC 2 cut(s) 1672, 2558
FauNDI CATATG 1 cut(s) 2793
FbaI TGATCA 1 cut(s) 1336
FblI GTMKAC 3 cut(s) 111, 688, 1671
Fnu4HI GCNGC 4 cut(s) 992, 1178, 2380, 2929
FokI GGATG 7 cut(s) 266, 1127, 1217, 1772, 2534, 2936, 2993
FriOI GRGCYC 4 cut(s) 1839, 2274, 2575, 2765
Fsp4HI GCNGC 4 cut(s) 992, 1178, 2380, 2929
FspI TGCGCA 1 cut(s) 341
GlaI GCGC 2 cut(s) 341, 779
GluI GCNGC 4 cut(s) 992, 1178, 2380, 2929
GsuI CTGGAG 5 cut(s) 52, 153, 1823, 1967, 2583
HaeIII GGCC 2 cut(s) 2469, 2610
HapII CCGG 3 cut(s) 351, 450, 1692
HhaI GCGC 2 cut(s) 342, 780
Hin1I GRCGYC 2 cut(s) 69, 2157
Hin1II CATG 7 cut(s) 62, 559, 767, 788, 1001, 1343, 2104
Hin6I GCGC 2 cut(s) 340, 778
HinP1I GCGC 2 cut(s) 340, 778
HincII GTYRAC 2 cut(s) 101, 689
HindII GTYRAC 2 cut(s) 101, 689
HindIII AAGCTT 3 cut(s) 423, 675, 1139
HinfI GANTC 9 cut(s) 194, 633, 1516, 2005, 2127, 2388, 2447, 2753, 2807
HpaII CCGG 3 cut(s) 351, 450, 1692
HphI GGTGA 4 cut(s) 12, 770, 1019, 2774
Hpy166II GTNNAC 6 cut(s) 101, 112, 689, 724, 1672, 2815
Hpy188I TCNGA 5 cut(s) 1036, 2223, 2767, 2970, 3023
Hpy8I GTNNAC 6 cut(s) 101, 112, 689, 724, 1672, 2815
Hpy99I CGWCG 2 cut(s) 1613, 2538
HpyAV CCTTC 7 cut(s) 339, 574, 608, 865, 1847, 2101, 2713
HpyCH4III ACNGT 8 cut(s) 105, 310, 537, 1229, 1312, 1746, 2309, 2743
HpyCH4IV ACGT 9 cut(s) 69, 97, 336, 701, 935, 1346, 1735, 2157, 2777
HpyF10VI GCNNNNNNNGC 4 cut(s) 417, 1459, 1843, 2537
HpyF3I CTNAG 5 cut(s) 86, 1768, 1860, 2755, 2809
HpySE526I ACGT 9 cut(s) 69, 97, 336, 701, 935, 1346, 1735, 2157, 2777
Hsp92I GRCGYC 2 cut(s) 69, 2157
Hsp92II CATG 7 cut(s) 62, 559, 767, 788, 1001, 1343, 2104
HspAI GCGC 2 cut(s) 340, 778
Ksp22I TGATCA 1 cut(s) 1336
LmnI GCTCC 5 cut(s) 172, 408, 417, 1842, 2277
Lsp1109I GCAGC 4 cut(s) 1003, 1164, 2366, 2940
LweI GCATC 8 cut(s) 1341, 1462, 1516, 1666, 1750, 2204, 2346, 2512
MaeII ACGT 9 cut(s) 69, 97, 336, 701, 935, 1346, 1735, 2157, 2777
MaeIII GTNAC 7 cut(s) 529, 964, 1342, 2164, 2394, 2682, 2823
MflI RGATCY 5 cut(s) 1105, 1888, 1924, 2256, 2970
MhlI GDGCHC 5 cut(s) 388, 1839, 2274, 2575, 2765
MlsI TGGCCA 1 cut(s) 2469
MluNI TGGCCA 1 cut(s) 2469
MlyI GAGTC 3 cut(s) 2382, 2747, 2801
MmeI TCCRAC 5 cut(s) 541, 610, 1003, 2679, 2717
Mox20I TGGCCA 1 cut(s) 2469
MroXI GAANNNNTTC 2 cut(s) 2058, 2712
MscI TGGCCA 1 cut(s) 2469
MslI CAYNNNNRTG 2 cut(s) 840, 1758
Msp20I TGGCCA 1 cut(s) 2469
MspA1I CMGCKG 1 cut(s) 1601
MspI CCGG 3 cut(s) 351, 450, 1692
MspR9I CCNGG 2 cut(s) 948, 2583
MvaI CCWGG 2 cut(s) 948, 2583
MvnI CGCG 1 cut(s) 206
MwoI GCNNNNNNNGC 4 cut(s) 417, 1459, 1843, 2537
NcoI CCATGG 1 cut(s) 58
NdeI CATATG 1 cut(s) 2793
NheI GCTAGC 1 cut(s) 1354
NlaIII CATG 7 cut(s) 62, 559, 767, 788, 1001, 1343, 2104
NlaIV GGNNCC 1 cut(s) 419
NmuCI GTSAC 4 cut(s) 529, 1342, 2394, 2682
NruI TCGCGA 1 cut(s) 206
NsbI TGCGCA 1 cut(s) 341
NspV TTCGAA 1 cut(s) 2706
PcsI WCGNNNNNNNCGW 1 cut(s) 1462
PdmI GAANNNNTTC 2 cut(s) 2058, 2712
PfeI GAWTC 6 cut(s) 194, 633, 1516, 2005, 2127, 2447
PflMI CCANNNNNTGG 1 cut(s) 1094
PfoI TCCNGGA 1 cut(s) 946
PkrI GCNGC 4 cut(s) 993, 1179, 2381, 2930
PleI GAGTC 3 cut(s) 2382, 2747, 2801
PmaCI CACGTG 1 cut(s) 337
PmlI CACGTG 1 cut(s) 337
PpsI GAGTC 3 cut(s) 2382, 2747, 2801
Ppu21I YACGTR 2 cut(s) 337, 1736
PshAI GACNNNNGTC 2 cut(s) 2367, 2392
PshBI ATTAAT 1 cut(s) 1616
Psp124BI GAGCTC 3 cut(s) 1839, 2274, 2765
Psp6I CCWGG 2 cut(s) 946, 2581
PspCI CACGTG 1 cut(s) 337
PspGI CCWGG 2 cut(s) 946, 2581
PspN4I GGNNCC 1 cut(s) 419
PspPI GGNCC 3 cut(s) 62, 641, 944
PstI CTGCAG 1 cut(s) 649
PsuI RGATCY 5 cut(s) 1105, 1888, 1924, 2256, 2970
RruI TCGCGA 1 cut(s) 206
RsaI GTAC 7 cut(s) 664, 700, 754, 1489, 1738, 2173, 2595
RsaNI GTAC 7 cut(s) 663, 699, 753, 1488, 1737, 2172, 2594
RseI CAYNNNNRTG 2 cut(s) 840, 1758
SacI GAGCTC 3 cut(s) 1839, 2274, 2765
SalI GTCGAC 1 cut(s) 687
SatI GCNGC 4 cut(s) 992, 1178, 2380, 2929
Sau96I GGNCC 3 cut(s) 62, 641, 944
SbfI CCTGCAGG 1 cut(s) 649
SchI GAGTC 3 cut(s) 2382, 2747, 2801
ScrFI CCNGG 2 cut(s) 948, 2583
SdaI CCTGCAGG 1 cut(s) 649
SduI GDGCHC 5 cut(s) 388, 1839, 2274, 2575, 2765
SfaNI GCATC 8 cut(s) 1341, 1462, 1516, 1666, 1750, 2204, 2346, 2512
SfcI CTRYAG 1 cut(s) 645
SfuI TTCGAA 1 cut(s) 2706
SinI GGWCC 3 cut(s) 62, 641, 944
SmiMI CAYNNNNRTG 2 cut(s) 840, 1758
SmlI CTYRAG 4 cut(s) 914, 1877, 2113, 2252
SmoI CTYRAG 4 cut(s) 914, 1877, 2113, 2252
Sse8387I CCTGCAGG 1 cut(s) 649
SsiI CCGC 4 cut(s) 1112, 1601, 1679, 2565
SstI GAGCTC 3 cut(s) 1839, 2274, 2765
StyD4I CCNGG 2 cut(s) 946, 2581
StyI CCWWGG 3 cut(s) 58, 1214, 1502
TaaI ACNGT 8 cut(s) 105, 310, 537, 1229, 1312, 1746, 2309, 2743
TaiI ACGT 9 cut(s) 72, 100, 339, 704, 938, 1349, 1738, 2160, 2780
TatI WGTACW 1 cut(s) 752
TfiI GAWTC 6 cut(s) 194, 633, 1516, 2005, 2127, 2447
TscAI CASTG 7 cut(s) 473, 1868, 1978, 2314, 2403, 2763, 2817
TseFI GTSAC 4 cut(s) 529, 1342, 2394, 2682
TseI GCWGC 4 cut(s) 991, 1177, 2379, 2928
Tsp45I GTSAC 4 cut(s) 529, 1342, 2394, 2682
TspGWI ACGGA 4 cut(s) 62, 1251, 1928, 2993
TspRI CASTG 7 cut(s) 473, 1868, 1978, 2314, 2403, 2763, 2817
Van91I CCANNNNNTGG 1 cut(s) 1094
VpaK11BI GGWCC 3 cut(s) 62, 641, 944
VspI ATTAAT 1 cut(s) 1616
XapI RAATTY 6 cut(s) 80, 804, 1128, 2424, 2626, 2921
XbaI TCTAGA 2 cut(s) 2050, 2179
XcmI CCANNNNNNNNNTGG 1 cut(s) 247
XmiI GTMKAC 3 cut(s) 111, 688, 1671
XmnI GAANNNNTTC 2 cut(s) 2058, 2712
ZraI GACGTC 2 cut(s) 70, 2158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.