Leucine Rich Repeat
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 14 - 188 | 1.5e-57 | TIR domain |
| TIR_2 | PF13676 | 17 - 109 | 1.4e-11 | TIR domain |
| NB-ARC | PF00931 | 190 - 365 | 5.9e-13 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 433 - 503 | 1e-16 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_3 | PF07725 | 609 - 628 | 3.5e-07 | Leucine Rich Repeat |
| LRR_13 | PF23286 | 700 - 761 | 1.1e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| C-JID | PF20160 | 864 - 907 | 6.5e-06 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 51 |
| AbsI | CCTCGAGG | 1 cut(s) | 1737 |
| Acc16I | TGCGCA | 1 cut(s) | 1667 |
| AccB1I | GGYRCC | 1 cut(s) | 1099 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1999 |
| AccII | CGCG | 3 cut(s) | 81, 503, 1191 |
| AccIII | TCCGGA | 1 cut(s) | 1942 |
| AclI | AACGTT | 1 cut(s) | 729 |
| AclWI | GGATC | 4 cut(s) | 977, 1212, 1615, 1953 |
| AcoI | YGGCCR | 1 cut(s) | 516 |
| AcsI | RAATTY | 4 cut(s) | 110, 273, 356, 2530 |
| AcyI | GRCGYC | 1 cut(s) | 48 |
| AfaI | GTAC | 5 cut(s) | 532, 773, 1593, 2740, 2922 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 387, 672, 1999, 2122 |
| AflIII | ACRYGT | 1 cut(s) | 2287 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1977 |
| AhlI | ACTAGT | 1 cut(s) | 1238 |
| AjnI | CCWGG | 3 cut(s) | 958, 1516, 2593 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 497, 529, 543, 575, 1578, 1610 |
| Alw21I | GWGCWC | 1 cut(s) | 183 |
| Alw26I | GTCTC | 9 cut(s) | 395, 935, 1169, 1544, 1964, 1970, 2238, 2759, 2780 |
| AlwI | GGATC | 4 cut(s) | 977, 1212, 1615, 1953 |
| Ama87I | CYCGRG | 2 cut(s) | 1737, 1967 |
| Aor13HI | TCCGGA | 1 cut(s) | 1942 |
| AoxI | GGCC | 1 cut(s) | 516 |
| ApeKI | GCWGC | 5 cut(s) | 422, 2262, 2563, 2783, 2889 |
| ApoI | RAATTY | 4 cut(s) | 110, 273, 356, 2530 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1894, 1926 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 75, 2340, 2479 |
| AspLEI | GCGC | 2 cut(s) | 1191, 1668 |
| AspS9I | GGNCC | 3 cut(s) | 641, 956, 2113 |
| AsuC2I | CCSGG | 1 cut(s) | 352 |
| AsuHPI | GGTGA | 7 cut(s) | 229, 710, 911, 1352, 1873, 2615, 2774 |
| AsuII | TTCGAA | 1 cut(s) | 2162 |
| AvaI | CYCGRG | 2 cut(s) | 1737, 1967 |
| AvaII | GGWCC | 3 cut(s) | 641, 956, 2113 |
| BalI | TGGCCA | 1 cut(s) | 518 |
| BanI | GGYRCC | 1 cut(s) | 1099 |
| BanII | GRGCYC | 2 cut(s) | 183, 1404 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 35, 67 |
| BauI | CACGAG | 1 cut(s) | 2900 |
| BbsI | GAAGAC | 3 cut(s) | 43, 1627, 1665 |
| Bbv12I | GWGCWC | 1 cut(s) | 183 |
| BbvI | GCAGC | 5 cut(s) | 434, 2249, 2575, 2795, 2901 |
| BccI | CCATC | 7 cut(s) | 337, 619, 674, 2224, 2531, 2657, 2661 |
| BceAI | ACGGC | 1 cut(s) | 176 |
| BciT130I | CCWGG | 3 cut(s) | 960, 1518, 2595 |
| BcnI | CCSGG | 1 cut(s) | 352 |
| BcoDI | GTCTC | 9 cut(s) | 395, 935, 1169, 1544, 1964, 1970, 2238, 2759, 2780 |
| BcuI | ACTAGT | 1 cut(s) | 1238 |
| BfaI | CTAG | 6 cut(s) | 27, 1223, 1239, 1982, 2072, 2657 |
| BglII | AGATCT | 3 cut(s) | 207, 1065, 2359 |
| BisI | GCNGC | 8 cut(s) | 423, 438, 688, 766, 2263, 2564, 2784, 2890 |
| BlsI | GCNGC | 8 cut(s) | 424, 439, 689, 767, 2264, 2565, 2785, 2891 |
| BmcAI | AGTACT | 1 cut(s) | 1593 |
| Bme1390I | CCNGG | 4 cut(s) | 352, 960, 1518, 2595 |
| Bme18I | GGWCC | 3 cut(s) | 641, 956, 2113 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1977 |
| BmeT110I | CYCGRG | 2 cut(s) | 1737, 1967 |
| BmgT120I | GGNCC | 3 cut(s) | 641, 956, 2113 |
| BmiI | GGNNCC | 8 cut(s) | 6, 642, 643, 1101, 1403, 1879, 2607, 2641 |
| BmrFI | CCNGG | 4 cut(s) | 352, 960, 1518, 2595 |
| BmsI | GCATC | 6 cut(s) | 1836, 2111, 2120, 2712, 2836, 2926 |
| BpiI | GAAGAC | 3 cut(s) | 43, 1627, 1665 |
| BpmI | CTGGAG | 1 cut(s) | 2633 |
| Bpu10I | CCTNAGC | 1 cut(s) | 931 |
| Bpu14I | TTCGAA | 1 cut(s) | 2162 |
| BpuEI | CTTGAG | 5 cut(s) | 1082, 1883, 2129, 2258, 2489 |
| BpuMI | CCSGG | 1 cut(s) | 352 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1785 |
| BsaHI | GRCGYC | 1 cut(s) | 48 |
| BsaI | GGTCTC | 2 cut(s) | 1169, 2238 |
| BsaJI | CCNNGG | 1 cut(s) | 64 |
| BsaWI | WCCGGW | 1 cut(s) | 1942 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 387, 672, 1999, 2122 |
| Bse3DI | GCAATG | 2 cut(s) | 1320, 2573 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1785 |
| BseAI | TCCGGA | 1 cut(s) | 1942 |
| BseBI | CCWGG | 3 cut(s) | 960, 1518, 2595 |
| BseDI | CCNNGG | 1 cut(s) | 64 |
| BseGI | GGATG | 8 cut(s) | 265, 329, 630, 1123, 2135, 2649, 2703, 2872 |
| BseJI | GATNNNNATC | 1 cut(s) | 1785 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 387, 672, 1999, 2122 |
| BseMI | GCAATG | 2 cut(s) | 1320, 2573 |
| BseMII | CTCAG | 3 cut(s) | 106, 1608, 2859 |
| BseRI | GAGGAG | 3 cut(s) | 305, 310, 2649 |
| BseXI | GCAGC | 5 cut(s) | 434, 2249, 2575, 2795, 2901 |
| BseYI | CCCAGC | 1 cut(s) | 56 |
| Bsh1236I | CGCG | 3 cut(s) | 81, 503, 1191 |
| BshFI | GGCC | 1 cut(s) | 518 |
| BshNI | GGYRCC | 1 cut(s) | 1099 |
| BsiHKAI | GWGCWC | 1 cut(s) | 183 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1737, 1967 |
| BsiSI | CCGG | 2 cut(s) | 351, 1943 |
| BslFI | GGGAC | 2 cut(s) | 627, 2276 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 387, 672, 1999, 2122 |
| BsmAI | GTCTC | 9 cut(s) | 395, 935, 1169, 1544, 1964, 1970, 2238, 2759, 2780 |
| BsmBI | CGTCTC | 2 cut(s) | 2759, 2780 |
| BsmFI | GGGAC | 2 cut(s) | 627, 2276 |
| BsmI | GAATGC | 2 cut(s) | 1504, 1829 |
| BsnI | GGCC | 1 cut(s) | 518 |
| Bso31I | GGTCTC | 2 cut(s) | 1169, 2238 |
| BsoBI | CYCGRG | 2 cut(s) | 1737, 1967 |
| Bsp119I | TTCGAA | 1 cut(s) | 2162 |
| Bsp1286I | GDGCHC | 2 cut(s) | 183, 1404 |
| Bsp13I | TCCGGA | 1 cut(s) | 1942 |
| Bsp1407I | TGTACA | 1 cut(s) | 2920 |
| Bsp68I | TCGCGA | 1 cut(s) | 503 |
| BspANI | GGCC | 1 cut(s) | 518 |
| BspCNI | CTCAG | 3 cut(s) | 105, 1609, 2858 |
| BspEI | TCCGGA | 1 cut(s) | 1942 |
| BspFNI | CGCG | 3 cut(s) | 81, 503, 1191 |
| BspHI | TCATGA | 1 cut(s) | 1638 |
| BspLI | GGNNCC | 8 cut(s) | 6, 642, 643, 1101, 1403, 1879, 2607, 2641 |
| BspPI | GGATC | 4 cut(s) | 977, 1212, 1615, 1953 |
| BspT104I | TTCGAA | 1 cut(s) | 2162 |
| BspT107I | GGYRCC | 1 cut(s) | 1099 |
| BspTNI | GGTCTC | 2 cut(s) | 1169, 2238 |
| BsrDI | GCAATG | 2 cut(s) | 1320, 2573 |
| BsrGI | TGTACA | 1 cut(s) | 2920 |
| BssECI | CCNNGG | 1 cut(s) | 64 |
| BssNI | GRCGYC | 1 cut(s) | 48 |
| BssSI | CACGAG | 1 cut(s) | 2900 |
| Bst2BI | CACGAG | 1 cut(s) | 2900 |
| Bst2UI | CCWGG | 3 cut(s) | 960, 1518, 2595 |
| Bst4CI | ACNGT | 6 cut(s) | 537, 715, 2495, 2627, 2743, 2877 |
| BstACI | GRCGYC | 1 cut(s) | 48 |
| BstAUI | TGTACA | 1 cut(s) | 2920 |
| BstBI | TTCGAA | 1 cut(s) | 2162 |
| BstC8I | GCNNGC | 5 cut(s) | 1514, 1758, 1890, 2587, 2701 |
| BstDEI | CTNAG | 7 cut(s) | 92, 204, 931, 1384, 1617, 1682, 2845 |
| BstF5I | GGATG | 8 cut(s) | 265, 329, 630, 1123, 2135, 2649, 2703, 2872 |
| BstFNI | CGCG | 3 cut(s) | 81, 503, 1191 |
| BstHHI | GCGC | 2 cut(s) | 1191, 1668 |
| BstMAI | GTCTC | 9 cut(s) | 395, 935, 1169, 1544, 1964, 1970, 2238, 2759, 2780 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 30, 446, 874, 1197, 2595 |
| BstNI | CCWGG | 3 cut(s) | 960, 1518, 2595 |
| BstNSI | RCATGY | 4 cut(s) | 1329, 1666, 2291, 2589 |
| BstSCI | CCNGG | 4 cut(s) | 350, 958, 1516, 2593 |
| BstUI | CGCG | 3 cut(s) | 81, 503, 1191 |
| BstV1I | GCAGC | 5 cut(s) | 434, 2249, 2575, 2795, 2901 |
| BstV2I | GAAGAC | 3 cut(s) | 43, 1627, 1665 |
| BstX2I | RGATCY | 5 cut(s) | 207, 1065, 1620, 1945, 2359 |
| BstYI | RGATCY | 5 cut(s) | 207, 1065, 1620, 1945, 2359 |
| BsuRI | GGCC | 1 cut(s) | 518 |
| BtgZI | GCGATG | 2 cut(s) | 652, 2764 |
| BtsCI | GGATG | 8 cut(s) | 265, 329, 630, 1123, 2135, 2649, 2703, 2872 |
| BtsI | GCAGTG | 1 cut(s) | 2411 |
| BtsIMutI | CAGTG | 1 cut(s) | 2411 |
| BtuMI | TCGCGA | 1 cut(s) | 503 |
| Cac8I | GCNNGC | 5 cut(s) | 1514, 1758, 1890, 2587, 2701 |
| CciI | TCATGA | 1 cut(s) | 1638 |
| CfoI | GCGC | 2 cut(s) | 1191, 1668 |
| Cfr13I | GGNCC | 3 cut(s) | 641, 956, 2113 |
| CseI | GACGC | 1 cut(s) | 1894 |
| Csp6I | GTAC | 5 cut(s) | 531, 772, 1592, 2739, 2921 |
| CviQI | GTAC | 5 cut(s) | 531, 772, 1592, 2739, 2921 |
| DdeI | CTNAG | 7 cut(s) | 92, 204, 931, 1384, 1617, 1682, 2845 |
| DraI | TTTAAA | 2 cut(s) | 279, 606 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1977 |
| EaeI | YGGCCR | 1 cut(s) | 516 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1977 |
| EciI | GGCGGA | 1 cut(s) | 2018 |
| Ecl136II | GAGCTC | 1 cut(s) | 181 |
| Eco24I | GRGCYC | 2 cut(s) | 183, 1404 |
| Eco31I | GGTCTC | 2 cut(s) | 1169, 2238 |
| Eco47I | GGWCC | 3 cut(s) | 641, 956, 2113 |
| Eco53kI | GAGCTC | 1 cut(s) | 181 |
| Eco88I | CYCGRG | 2 cut(s) | 1737, 1967 |
| EcoICRI | GAGCTC | 1 cut(s) | 181 |
| EcoO109I | RGGNCCY | 2 cut(s) | 641, 2113 |
| EcoRII | CCWGG | 3 cut(s) | 958, 1516, 2593 |
| EcoT22I | ATGCAT | 3 cut(s) | 1464, 1851, 2941 |
| EcoT38I | GRGCYC | 2 cut(s) | 183, 1404 |
| Esp3I | CGTCTC | 2 cut(s) | 2759, 2780 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 410, 442, 1578, 1610 |
| FaqI | GGGAC | 2 cut(s) | 627, 2276 |
| FauI | CCCGC | 2 cut(s) | 442, 652 |
| FauNDI | CATATG | 2 cut(s) | 576, 1185 |
| Fnu4HI | GCNGC | 8 cut(s) | 423, 438, 688, 766, 2263, 2564, 2784, 2890 |
| FokI | GGATG | 8 cut(s) | 272, 316, 637, 1130, 2142, 2636, 2690, 2879 |
| FriOI | GRGCYC | 2 cut(s) | 183, 1404 |
| Fsp4HI | GCNGC | 8 cut(s) | 423, 438, 688, 766, 2263, 2564, 2784, 2890 |
| FspBI | CTAG | 6 cut(s) | 27, 1223, 1239, 1982, 2072, 2657 |
| FspI | TGCGCA | 1 cut(s) | 1667 |
| GlaI | GCGC | 2 cut(s) | 1190, 1667 |
| GluI | GCNGC | 8 cut(s) | 423, 438, 688, 766, 2263, 2564, 2784, 2890 |
| GsaI | CCCAGC | 1 cut(s) | 60 |
| GsuI | CTGGAG | 1 cut(s) | 2633 |
| HaeIII | GGCC | 1 cut(s) | 518 |
| HapII | CCGG | 2 cut(s) | 351, 1943 |
| HgaI | GACGC | 1 cut(s) | 1894 |
| HhaI | GCGC | 2 cut(s) | 1191, 1668 |
| Hin1I | GRCGYC | 1 cut(s) | 48 |
| Hin6I | GCGC | 2 cut(s) | 1189, 1666 |
| HinP1I | GCGC | 2 cut(s) | 1189, 1666 |
| HindIII | AAGCTT | 2 cut(s) | 1305, 1865 |
| HpaII | CCGG | 2 cut(s) | 351, 1943 |
| HphI | GGTGA | 7 cut(s) | 229, 710, 911, 1352, 1873, 2615, 2774 |
| Hpy166II | GTNNAC | 4 cut(s) | 533, 791, 2575, 2921 |
| Hpy188I | TCNGA | 7 cut(s) | 65, 173, 334, 348, 374, 1585, 1618 |
| Hpy8I | GTNNAC | 4 cut(s) | 533, 791, 2575, 2921 |
| Hpy99I | CGWCG | 2 cut(s) | 2390, 2553 |
| HpyAV | CCTTC | 9 cut(s) | 380, 412, 1221, 1325, 1815, 1868, 1979, 2022, 2120 |
| HpyCH4III | ACNGT | 6 cut(s) | 537, 715, 2495, 2627, 2743, 2877 |
| HpyCH4IV | ACGT | 5 cut(s) | 48, 618, 729, 1525, 2385 |
| HpyCH4V | TGCA | 8 cut(s) | 285, 1047, 1325, 1462, 1849, 1892, 2703, 2939 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 30, 446, 874, 1197, 2595 |
| HpyF3I | CTNAG | 7 cut(s) | 92, 204, 931, 1384, 1617, 1682, 2845 |
| HpySE526I | ACGT | 5 cut(s) | 48, 618, 729, 1525, 2385 |
| Hsp92I | GRCGYC | 1 cut(s) | 48 |
| HspAI | GCGC | 2 cut(s) | 1189, 1666 |
| KflI | GGGWCCC | 1 cut(s) | 641 |
| Kpn2I | TCCGGA | 1 cut(s) | 1942 |
| LmnI | GCTCC | 4 cut(s) | 10, 178, 1407, 2005 |
| Lsp1109I | GCAGC | 5 cut(s) | 434, 2249, 2575, 2795, 2901 |
| LweI | GCATC | 6 cut(s) | 1836, 2111, 2120, 2712, 2836, 2926 |
| MaeI | CTAG | 6 cut(s) | 27, 1223, 1239, 1982, 2072, 2657 |
| MaeII | ACGT | 5 cut(s) | 48, 618, 729, 1525, 2385 |
| MaeIII | GTNAC | 9 cut(s) | 130, 698, 976, 1379, 1470, 1556, 2409, 2621, 2818 |
| MflI | RGATCY | 5 cut(s) | 207, 1065, 1620, 1945, 2359 |
| MhlI | GDGCHC | 2 cut(s) | 183, 1404 |
| MlsI | TGGCCA | 1 cut(s) | 518 |
| MluNI | TGGCCA | 1 cut(s) | 518 |
| MlyI | GAGTC | 1 cut(s) | 1402 |
| MmeI | TCCRAC | 2 cut(s) | 17, 1429 |
| Mox20I | TGGCCA | 1 cut(s) | 518 |
| Mph1103I | ATGCAT | 3 cut(s) | 1464, 1851, 2941 |
| MroI | TCCGGA | 1 cut(s) | 1942 |
| MroXI | GAANNNNTTC | 3 cut(s) | 75, 2340, 2479 |
| MscI | TGGCCA | 1 cut(s) | 518 |
| MseI | TTAA | 7 cut(s) | 278, 605, 1268, 2135, 2687, 2694, 2841 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1118 |
| Msp20I | TGGCCA | 1 cut(s) | 518 |
| MspA1I | CMGCKG | 1 cut(s) | 647 |
| MspI | CCGG | 2 cut(s) | 351, 1943 |
| MspR9I | CCNGG | 4 cut(s) | 352, 960, 1518, 2595 |
| MssI | GTTTAAAC | 1 cut(s) | 606 |
| Mva1269I | GAATGC | 2 cut(s) | 1504, 1829 |
| MvaI | CCWGG | 3 cut(s) | 960, 1518, 2595 |
| MvnI | CGCG | 3 cut(s) | 81, 503, 1191 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 30, 446, 874, 1197, 2595 |
| NciI | CCSGG | 1 cut(s) | 352 |
| NdeI | CATATG | 2 cut(s) | 576, 1185 |
| NlaIV | GGNNCC | 8 cut(s) | 6, 642, 643, 1101, 1403, 1879, 2607, 2641 |
| NmuCI | GTSAC | 5 cut(s) | 698, 1379, 2409, 2621, 2818 |
| NruI | TCGCGA | 1 cut(s) | 503 |
| NsbI | TGCGCA | 1 cut(s) | 1667 |
| NsiI | ATGCAT | 3 cut(s) | 1464, 1851, 2941 |
| NspI | RCATGY | 4 cut(s) | 1329, 1666, 2291, 2589 |
| NspV | TTCGAA | 1 cut(s) | 2162 |
| PaeI | GCATGC | 1 cut(s) | 2589 |
| PaeR7I | CTCGAG | 2 cut(s) | 1737, 1967 |
| PagI | TCATGA | 1 cut(s) | 1638 |
| PciI | ACATGT | 1 cut(s) | 2287 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 615 |
| PctI | GAATGC | 2 cut(s) | 1504, 1829 |
| PdmI | GAANNNNTTC | 3 cut(s) | 75, 2340, 2479 |
| PflFI | GACNNNGTC | 1 cut(s) | 2816 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1999 |
| PfoI | TCCNGGA | 1 cut(s) | 958 |
| PkrI | GCNGC | 8 cut(s) | 424, 439, 689, 767, 2264, 2565, 2785, 2891 |
| PleI | GAGTC | 1 cut(s) | 1401 |
| PmeI | GTTTAAAC | 1 cut(s) | 606 |
| PpsI | GAGTC | 1 cut(s) | 1401 |
| PpuMI | RGGWCCY | 2 cut(s) | 641, 2113 |
| PscI | ACATGT | 1 cut(s) | 2287 |
| Psp124BI | GAGCTC | 1 cut(s) | 183 |
| Psp1406I | AACGTT | 1 cut(s) | 729 |
| Psp5II | RGGWCCY | 2 cut(s) | 641, 2113 |
| Psp6I | CCWGG | 3 cut(s) | 958, 1516, 2593 |
| PspFI | CCCAGC | 1 cut(s) | 56 |
| PspGI | CCWGG | 3 cut(s) | 958, 1516, 2593 |
| PspN4I | GGNNCC | 8 cut(s) | 6, 642, 643, 1101, 1403, 1879, 2607, 2641 |
| PspPI | GGNCC | 3 cut(s) | 641, 956, 2113 |
| PspPPI | RGGWCCY | 2 cut(s) | 641, 2113 |
| PspXI | VCTCGAGB | 1 cut(s) | 1737 |
| PsuI | RGATCY | 5 cut(s) | 207, 1065, 1620, 1945, 2359 |
| PsyI | GACNNNGTC | 1 cut(s) | 2816 |
| RruI | TCGCGA | 1 cut(s) | 503 |
| RsaI | GTAC | 5 cut(s) | 532, 773, 1593, 2740, 2922 |
| RsaNI | GTAC | 5 cut(s) | 531, 772, 1592, 2739, 2921 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1118 |
| SacI | GAGCTC | 1 cut(s) | 183 |
| SaqAI | TTAA | 7 cut(s) | 278, 605, 1268, 2135, 2687, 2694, 2841 |
| SatI | GCNGC | 8 cut(s) | 423, 438, 688, 766, 2263, 2564, 2784, 2890 |
| Sau96I | GGNCC | 3 cut(s) | 641, 956, 2113 |
| ScaI | AGTACT | 1 cut(s) | 1593 |
| SchI | GAGTC | 1 cut(s) | 1402 |
| ScrFI | CCNGG | 4 cut(s) | 352, 960, 1518, 2595 |
| SduI | GDGCHC | 2 cut(s) | 183, 1404 |
| SfaNI | GCATC | 6 cut(s) | 1836, 2111, 2120, 2712, 2836, 2926 |
| Sfr274I | CTCGAG | 2 cut(s) | 1737, 1967 |
| SfuI | TTCGAA | 1 cut(s) | 2162 |
| SinI | GGWCC | 3 cut(s) | 641, 956, 2113 |
| SlaI | CTCGAG | 2 cut(s) | 1737, 1967 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1118 |
| SmlI | CTYRAG | 7 cut(s) | 1061, 1737, 1898, 1967, 2108, 2273, 2468 |
| SmoI | CTYRAG | 7 cut(s) | 1061, 1737, 1898, 1967, 2108, 2273, 2468 |
| SpeI | ACTAGT | 1 cut(s) | 1238 |
| SphI | GCATGC | 1 cut(s) | 2589 |
| SspI | AATATT | 4 cut(s) | 816, 1266, 2734, 2928 |
| SspMI | CTAG | 6 cut(s) | 27, 1223, 1239, 1982, 2072, 2657 |
| SstI | GAGCTC | 1 cut(s) | 183 |
| StyD4I | CCNGG | 4 cut(s) | 350, 958, 1516, 2593 |
| TaaI | ACNGT | 6 cut(s) | 537, 715, 2495, 2627, 2743, 2877 |
| TaiI | ACGT | 5 cut(s) | 51, 621, 732, 1528, 2388 |
| TaqII | GACCGA | 1 cut(s) | 446 |
| TatI | WGTACW | 4 cut(s) | 771, 1591, 2738, 2920 |
| TauI | GCSGC | 3 cut(s) | 440, 690, 768 |
| Tru1I | TTAA | 7 cut(s) | 278, 605, 1268, 2135, 2687, 2694, 2841 |
| Tru9I | TTAA | 7 cut(s) | 278, 605, 1268, 2135, 2687, 2694, 2841 |
| TscAI | CASTG | 1 cut(s) | 2418 |
| TseFI | GTSAC | 5 cut(s) | 698, 1379, 2409, 2621, 2818 |
| TseI | GCWGC | 5 cut(s) | 422, 2262, 2563, 2783, 2889 |
| Tsp45I | GTSAC | 5 cut(s) | 698, 1379, 2409, 2621, 2818 |
| TspGWI | ACGGA | 3 cut(s) | 1157, 2336, 2924 |
| TspRI | CASTG | 1 cut(s) | 2418 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2816 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1999 |
| VpaK11BI | GGWCC | 3 cut(s) | 641, 956, 2113 |
| XapI | RAATTY | 4 cut(s) | 110, 273, 356, 2530 |
| XbaI | TCTAGA | 2 cut(s) | 1981, 2656 |
| XceI | RCATGY | 4 cut(s) | 1329, 1666, 2291, 2589 |
| XhoI | CTCGAG | 2 cut(s) | 1737, 1967 |
| XmnI | GAANNNNTTC | 3 cut(s) | 75, 2340, 2479 |
| XspI | CTAG | 6 cut(s) | 27, 1223, 1239, 1982, 2072, 2657 |
| ZraI | GACGTC | 1 cut(s) | 49 |
| ZrmI | AGTACT | 1 cut(s) | 1593 |
| Zsp2I | ATGCAT | 3 cut(s) | 1464, 1851, 2941 |