ADP binding
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 15 - 190 | 2.4e-60 | TIR domain |
| TIR_2 | PF13676 | 18 - 109 | 1.4e-08 | TIR domain |
| NB-ARC | PF00931 | 194 - 365 | 2.1e-15 | NB-ARC domain |
| ATPase_2 | PF01637 | 199 - 308 | 1.5e-06 | ATPase domain predominantly from Archaea |
| WHD_ROQ1 | PF23282 | 432 - 501 | 1.4e-11 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_3 | PF07725 | 604 - 623 | 4.6e-07 | Leucine Rich Repeat |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 78 |
| Acc36I | ACCTGC | 2 cut(s) | 647, 1729 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2689 |
| AccI | GTMKAC | 2 cut(s) | 1344, 2868 |
| AccII | CGCG | 3 cut(s) | 48, 1191, 2100 |
| AciI | CCGC | 5 cut(s) | 46, 1191, 1442, 1724, 2961 |
| AclWI | GGATC | 5 cut(s) | 215, 326, 377, 996, 1938 |
| AcoI | YGGCCR | 1 cut(s) | 2527 |
| AcsI | RAATTY | 6 cut(s) | 362, 1808, 1912, 2133, 2257, 2903 |
| AcuI | CTGAAG | 1 cut(s) | 3131 |
| AcyI | GRCGYC | 1 cut(s) | 75 |
| AfaI | GTAC | 3 cut(s) | 1075, 1576, 2798 |
| AfeI | AGCGCT | 1 cut(s) | 2493 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1174, 1518, 2689 |
| AflIII | ACRYGT | 1 cut(s) | 2098 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 74, 3073 |
| AhlI | ACTAGT | 1 cut(s) | 1577 |
| AjnI | CCWGG | 5 cut(s) | 35, 958, 2413, 2587, 3083 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1880, 1912 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2072, 2104 |
| Alw21I | GWGCWC | 4 cut(s) | 225, 465, 1851, 2412 |
| Alw26I | GTCTC | 6 cut(s) | 33, 404, 1169, 2231, 2453, 2815 |
| AlwI | GGATC | 5 cut(s) | 215, 326, 377, 996, 1938 |
| Ama87I | CYCGRG | 2 cut(s) | 1397, 1844 |
| Aor51HI | AGCGCT | 1 cut(s) | 2493 |
| AoxI | GGCC | 2 cut(s) | 2527, 2663 |
| ApeKI | GCWGC | 5 cut(s) | 265, 784, 916, 2382, 2910 |
| ApoI | RAATTY | 6 cut(s) | 362, 1808, 1912, 2133, 2257, 2903 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 3120 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 801, 1494, 2328 |
| AspLEI | GCGC | 2 cut(s) | 2494, 2807 |
| AspS9I | GGNCC | 5 cut(s) | 68, 650, 956, 1905, 2958 |
| AsuC2I | CCSGG | 1 cut(s) | 1928 |
| AsuHPI | GGTGA | 1 cut(s) | 2497 |
| AsuII | TTCGAA | 3 cut(s) | 521, 2190, 2901 |
| AvaI | CYCGRG | 2 cut(s) | 1397, 1844 |
| AvaII | GGWCC | 5 cut(s) | 68, 650, 956, 1905, 2958 |
| BalI | TGGCCA | 1 cut(s) | 2529 |
| BanII | GRGCYC | 2 cut(s) | 1512, 2412 |
| BauI | CACGAG | 1 cut(s) | 1539 |
| BbsI | GAAGAC | 9 cut(s) | 6, 43, 404, 564, 1736, 1778, 2395, 3003, 3107 |
| Bbv12I | GWGCWC | 4 cut(s) | 225, 465, 1851, 2412 |
| BbvCI | CCTCAGC | 1 cut(s) | 92 |
| BbvI | GCAGC | 5 cut(s) | 252, 771, 928, 2369, 2922 |
| BccI | CCATC | 9 cut(s) | 176, 343, 617, 821, 1253, 1691, 1896, 2005, 2788 |
| BceAI | ACGGC | 1 cut(s) | 2782 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 202, 236, 1646, 1680 |
| BciT130I | CCWGG | 5 cut(s) | 37, 960, 2415, 2589, 3085 |
| BciVI | GTATCC | 3 cut(s) | 1271, 2098, 3091 |
| BclI | TGATCA | 3 cut(s) | 142, 1351, 2614 |
| BcnI | CCSGG | 1 cut(s) | 1928 |
| BcoDI | GTCTC | 6 cut(s) | 33, 404, 1169, 2231, 2453, 2815 |
| BcuI | ACTAGT | 1 cut(s) | 1577 |
| BfaI | CTAG | 9 cut(s) | 269, 705, 1047, 1160, 1232, 1578, 2093, 2432, 2987 |
| BfmI | CTRYAG | 3 cut(s) | 654, 2383, 2604 |
| BfoI | RGCGCY | 2 cut(s) | 2495, 2808 |
| BfuAI | ACCTGC | 2 cut(s) | 647, 1729 |
| BfuI | GTATCC | 3 cut(s) | 1271, 2098, 3091 |
| BglII | AGATCT | 2 cut(s) | 2952, 3106 |
| BisI | GCNGC | 5 cut(s) | 266, 785, 917, 2383, 2911 |
| BlsI | GCNGC | 5 cut(s) | 267, 786, 918, 2384, 2912 |
| Bme1390I | CCNGG | 6 cut(s) | 37, 960, 1928, 2415, 2589, 3085 |
| Bme18I | GGWCC | 5 cut(s) | 68, 650, 956, 1905, 2958 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 74, 3073 |
| BmeT110I | CYCGRG | 2 cut(s) | 1397, 1844 |
| BmgT120I | GGNCC | 5 cut(s) | 68, 650, 956, 1905, 2958 |
| BmiI | GGNNCC | 1 cut(s) | 1907 |
| BmrFI | CCNGG | 6 cut(s) | 37, 960, 1928, 2415, 2589, 3085 |
| BmrI | ACTGGG | 2 cut(s) | 484, 1219 |
| BmuI | ACTGGG | 2 cut(s) | 484, 1219 |
| BpiI | GAAGAC | 9 cut(s) | 6, 43, 404, 564, 1736, 1778, 2395, 3003, 3107 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1849, 1881, 2481, 2513 |
| BpmI | CTGGAG | 6 cut(s) | 58, 477, 1876, 1973, 2477, 2898 |
| Bpu10I | CCTNAGC | 1 cut(s) | 92 |
| Bpu14I | TTCGAA | 3 cut(s) | 521, 2190, 2901 |
| BpuEI | CTTGAG | 3 cut(s) | 944, 1868, 2104 |
| BpuMI | CCSGG | 1 cut(s) | 1928 |
| Bsa29I | ATCGAT | 1 cut(s) | 1257 |
| BsaAI | YACGTR | 1 cut(s) | 104 |
| BsaBI | GATNNNNATC | 2 cut(s) | 212, 1962 |
| BsaHI | GRCGYC | 1 cut(s) | 75 |
| BsaI | GGTCTC | 3 cut(s) | 33, 1169, 2453 |
| BsaJI | CCNNGG | 4 cut(s) | 64, 981, 2413, 3095 |
| BsaWI | WCCGGW | 1 cut(s) | 356 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1174, 1518, 2689 |
| Bse1I | ACTGG | 6 cut(s) | 479, 953, 1214, 2138, 2383, 2460 |
| Bse3DI | GCAATG | 5 cut(s) | 450, 675, 1320, 1371, 2399 |
| Bse8I | GATNNNNATC | 2 cut(s) | 212, 1962 |
| BseBI | CCWGG | 5 cut(s) | 37, 960, 2415, 2589, 3085 |
| BseCI | ATCGAT | 1 cut(s) | 1257 |
| BseDI | CCNNGG | 4 cut(s) | 64, 981, 2413, 3095 |
| BseGI | GGATG | 9 cut(s) | 265, 628, 1393, 1907, 1997, 2043, 2120, 2301, 2679 |
| BseJI | GATNNNNATC | 2 cut(s) | 212, 1962 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1174, 1518, 2689 |
| BseMI | GCAATG | 5 cut(s) | 450, 675, 1320, 1371, 2399 |
| BseMII | CTCAG | 2 cut(s) | 106, 1880 |
| BseNI | ACTGG | 6 cut(s) | 479, 953, 1214, 2138, 2383, 2460 |
| BseRI | GAGGAG | 4 cut(s) | 422, 1307, 2486, 2804 |
| BseXI | GCAGC | 5 cut(s) | 252, 771, 928, 2369, 2922 |
| BsgI | GTGCAG | 1 cut(s) | 304 |
| Bsh1236I | CGCG | 3 cut(s) | 48, 1191, 2100 |
| Bsh1285I | CGRYCG | 1 cut(s) | 216 |
| BshFI | GGCC | 2 cut(s) | 2529, 2665 |
| BshVI | ATCGAT | 1 cut(s) | 1257 |
| BsiEI | CGRYCG | 1 cut(s) | 216 |
| BsiHKAI | GWGCWC | 4 cut(s) | 225, 465, 1851, 2412 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1397, 1844 |
| BsiSI | CCGG | 2 cut(s) | 357, 1928 |
| BslFI | GGGAC | 3 cut(s) | 158, 1891, 3057 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1174, 1518, 2689 |
| BsmAI | GTCTC | 6 cut(s) | 33, 404, 1169, 2231, 2453, 2815 |
| BsmBI | CGTCTC | 1 cut(s) | 2231 |
| BsmFI | GGGAC | 3 cut(s) | 158, 1891, 3057 |
| BsmI | GAATGC | 2 cut(s) | 1325, 1716 |
| BsnI | GGCC | 2 cut(s) | 2529, 2665 |
| Bso31I | GGTCTC | 3 cut(s) | 33, 1169, 2453 |
| BsoBI | CYCGRG | 2 cut(s) | 1397, 1844 |
| Bsp119I | TTCGAA | 3 cut(s) | 521, 2190, 2901 |
| Bsp1286I | GDGCHC | 5 cut(s) | 225, 465, 1512, 1851, 2412 |
| Bsp1407I | TGTACA | 2 cut(s) | 1073, 2796 |
| Bsp19I | CCATGG | 1 cut(s) | 64 |
| BspACI | CCGC | 5 cut(s) | 46, 1191, 1442, 1724, 2961 |
| BspANI | GGCC | 2 cut(s) | 2529, 2665 |
| BspCNI | CTCAG | 2 cut(s) | 105, 1879 |
| BspDI | ATCGAT | 1 cut(s) | 1257 |
| BspFNI | CGCG | 3 cut(s) | 48, 1191, 2100 |
| BspLI | GGNNCC | 1 cut(s) | 1907 |
| BspMAI | CTGCAG | 3 cut(s) | 658, 2387, 2608 |
| BspMI | ACCTGC | 2 cut(s) | 647, 1729 |
| BspPI | GGATC | 5 cut(s) | 215, 326, 377, 996, 1938 |
| BspQI | GCTCTTC | 1 cut(s) | 2355 |
| BspT104I | TTCGAA | 3 cut(s) | 521, 2190, 2901 |
| BspTNI | GGTCTC | 3 cut(s) | 33, 1169, 2453 |
| BsrDI | GCAATG | 5 cut(s) | 450, 675, 1320, 1371, 2399 |
| BsrGI | TGTACA | 2 cut(s) | 1073, 2796 |
| BsrI | ACTGG | 6 cut(s) | 479, 953, 1214, 2138, 2383, 2460 |
| BssECI | CCNNGG | 4 cut(s) | 64, 981, 2413, 3095 |
| BssNI | GRCGYC | 1 cut(s) | 75 |
| BssSI | CACGAG | 1 cut(s) | 1539 |
| BssT1I | CCWWGG | 1 cut(s) | 64 |
| Bst2BI | CACGAG | 1 cut(s) | 1539 |
| Bst2UI | CCWGG | 5 cut(s) | 37, 960, 2415, 2589, 3085 |
| Bst4CI | ACNGT | 3 cut(s) | 111, 316, 2464 |
| Bst6I | CTCTTC | 2 cut(s) | 2355, 2587 |
| BstACI | GRCGYC | 1 cut(s) | 75 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 592, 2210 |
| BstAUI | TGTACA | 2 cut(s) | 1073, 2796 |
| BstBAI | YACGTR | 1 cut(s) | 104 |
| BstBI | TTCGAA | 3 cut(s) | 521, 2190, 2901 |
| BstC8I | GCNNGC | 6 cut(s) | 1122, 1413, 1841, 2202, 2604, 2884 |
| BstDEI | CTNAG | 6 cut(s) | 92, 1268, 1748, 1866, 1874, 2306 |
| BstDSI | CCRYGG | 2 cut(s) | 64, 981 |
| BstEII | GGTNACC | 1 cut(s) | 2981 |
| BstF5I | GGATG | 9 cut(s) | 265, 628, 1393, 1907, 1997, 2043, 2120, 2301, 2679 |
| BstFNI | CGCG | 3 cut(s) | 48, 1191, 2100 |
| BstH2I | RGCGCY | 2 cut(s) | 2495, 2808 |
| BstHHI | GCGC | 2 cut(s) | 2494, 2807 |
| BstMAI | GTCTC | 6 cut(s) | 33, 404, 1169, 2231, 2453, 2815 |
| BstMCI | CGRYCG | 1 cut(s) | 216 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 592, 1003, 2210, 2491, 2540 |
| BstNI | CCWGG | 5 cut(s) | 37, 960, 2415, 2589, 3085 |
| BstNSI | RCATGY | 1 cut(s) | 2204 |
| BstPI | GGTNACC | 1 cut(s) | 2981 |
| BstSCI | CCNGG | 6 cut(s) | 35, 958, 1926, 2413, 2587, 3083 |
| BstSFI | CTRYAG | 3 cut(s) | 654, 2383, 2604 |
| BstSNI | TACGTA | 1 cut(s) | 104 |
| BstUI | CGCG | 3 cut(s) | 48, 1191, 2100 |
| BstV1I | GCAGC | 5 cut(s) | 252, 771, 928, 2369, 2922 |
| BstV2I | GAAGAC | 9 cut(s) | 6, 43, 404, 564, 1736, 1778, 2395, 3003, 3107 |
| BstX2I | RGATCY | 5 cut(s) | 207, 331, 1930, 2952, 3106 |
| BstYI | RGATCY | 5 cut(s) | 207, 331, 1930, 2952, 3106 |
| Bsu15I | ATCGAT | 1 cut(s) | 1257 |
| BsuI | GTATCC | 3 cut(s) | 1271, 2098, 3091 |
| BsuRI | GGCC | 2 cut(s) | 2529, 2665 |
| BsuTUI | ATCGAT | 1 cut(s) | 1257 |
| BtgI | CCRYGG | 2 cut(s) | 64, 981 |
| BtgZI | GCGATG | 1 cut(s) | 1566 |
| BtsCI | GGATG | 9 cut(s) | 265, 628, 1393, 1907, 1997, 2043, 2120, 2301, 2679 |
| BtsIMutI | CAGTG | 1 cut(s) | 2453 |
| BveI | ACCTGC | 2 cut(s) | 647, 1729 |
| Cac8I | GCNNGC | 6 cut(s) | 1122, 1413, 1841, 2202, 2604, 2884 |
| CfoI | GCGC | 2 cut(s) | 2494, 2807 |
| Cfr13I | GGNCC | 5 cut(s) | 68, 650, 956, 1905, 2958 |
| ClaI | ATCGAT | 1 cut(s) | 1257 |
| CseI | GACGC | 4 cut(s) | 37, 1649, 2089, 3080 |
| Csp6I | GTAC | 3 cut(s) | 1074, 1575, 2797 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2506, 2541 |
| CviQI | GTAC | 3 cut(s) | 1074, 1575, 2797 |
| DdeI | CTNAG | 6 cut(s) | 92, 1268, 1748, 1866, 1874, 2306 |
| DraI | TTTAAA | 1 cut(s) | 1648 |
| DriI | GACNNNNNGTC | 2 cut(s) | 74, 3073 |
| EaeI | YGGCCR | 1 cut(s) | 2527 |
| Eam1104I | CTCTTC | 2 cut(s) | 2355, 2587 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 74, 3073 |
| EarI | CTCTTC | 2 cut(s) | 2355, 2587 |
| EciI | GGCGGA | 1 cut(s) | 1457 |
| Ecl136II | GAGCTC | 1 cut(s) | 2410 |
| Eco105I | TACGTA | 1 cut(s) | 104 |
| Eco130I | CCWWGG | 1 cut(s) | 64 |
| Eco147I | AGGCCT | 1 cut(s) | 2665 |
| Eco24I | GRGCYC | 2 cut(s) | 1512, 2412 |
| Eco31I | GGTCTC | 3 cut(s) | 33, 1169, 2453 |
| Eco47I | GGWCC | 5 cut(s) | 68, 650, 956, 1905, 2958 |
| Eco47III | AGCGCT | 1 cut(s) | 2493 |
| Eco53kI | GAGCTC | 1 cut(s) | 2410 |
| Eco57I | CTGAAG | 1 cut(s) | 3131 |
| Eco88I | CYCGRG | 2 cut(s) | 1397, 1844 |
| Eco91I | GGTNACC | 1 cut(s) | 2981 |
| EcoICRI | GAGCTC | 1 cut(s) | 2410 |
| EcoO65I | GGTNACC | 1 cut(s) | 2981 |
| EcoRI | GAATTC | 1 cut(s) | 2903 |
| EcoRII | CCWGG | 5 cut(s) | 35, 958, 2413, 2587, 3083 |
| EcoT14I | CCWWGG | 1 cut(s) | 64 |
| EcoT22I | ATGCAT | 2 cut(s) | 1716, 2206 |
| EcoT38I | GRGCYC | 2 cut(s) | 1512, 2412 |
| ErhI | CCWWGG | 1 cut(s) | 64 |
| Esp3I | CGTCTC | 1 cut(s) | 2231 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 786, 818, 2567, 2599, 2725, 2757 |
| FaqI | GGGAC | 3 cut(s) | 158, 1891, 3057 |
| FauI | CCCGC | 1 cut(s) | 1717 |
| FauNDI | CATATG | 2 cut(s) | 1078, 1105 |
| FbaI | TGATCA | 3 cut(s) | 142, 1351, 2614 |
| FblI | GTMKAC | 2 cut(s) | 1344, 2868 |
| Fnu4HI | GCNGC | 5 cut(s) | 266, 785, 917, 2383, 2911 |
| FokI | GGATG | 9 cut(s) | 272, 635, 1400, 1914, 1984, 2050, 2127, 2288, 2666 |
| FriOI | GRGCYC | 2 cut(s) | 1512, 2412 |
| Fsp4HI | GCNGC | 5 cut(s) | 266, 785, 917, 2383, 2911 |
| FspBI | CTAG | 9 cut(s) | 269, 705, 1047, 1160, 1232, 1578, 2093, 2432, 2987 |
| GlaI | GCGC | 2 cut(s) | 2493, 2806 |
| GluI | GCNGC | 5 cut(s) | 266, 785, 917, 2383, 2911 |
| GsuI | CTGGAG | 6 cut(s) | 58, 477, 1876, 1973, 2477, 2898 |
| HaeII | RGCGCY | 2 cut(s) | 2495, 2808 |
| HaeIII | GGCC | 2 cut(s) | 2529, 2665 |
| HapII | CCGG | 2 cut(s) | 357, 1928 |
| HgaI | GACGC | 4 cut(s) | 37, 1649, 2089, 3080 |
| HhaI | GCGC | 2 cut(s) | 2494, 2807 |
| Hin1I | GRCGYC | 1 cut(s) | 75 |
| Hin6I | GCGC | 2 cut(s) | 2492, 2805 |
| HinP1I | GCGC | 2 cut(s) | 2492, 2805 |
| HincII | GTYRAC | 3 cut(s) | 1018, 1345, 2869 |
| HindII | GTYRAC | 3 cut(s) | 1018, 1345, 2869 |
| HindIII | AAGCTT | 3 cut(s) | 429, 1056, 1118 |
| HpaI | GTTAAC | 1 cut(s) | 1018 |
| HpaII | CCGG | 2 cut(s) | 357, 1928 |
| HphI | GGTGA | 1 cut(s) | 2497 |
| Hpy166II | GTNNAC | 8 cut(s) | 107, 350, 907, 1018, 1345, 2797, 2869, 3067 |
| Hpy8I | GTNNAC | 8 cut(s) | 107, 350, 907, 1018, 1345, 2797, 2869, 3067 |
| Hpy99I | CGWCG | 6 cut(s) | 1346, 1349, 2556, 2559, 2870, 3135 |
| HpyAV | CCTTC | 8 cut(s) | 386, 1163, 1208, 1439, 1568, 1912, 2569, 2676 |
| HpyCH4III | ACNGT | 3 cut(s) | 111, 316, 2464 |
| HpyCH4IV | ACGT | 6 cut(s) | 75, 103, 1341, 2865, 3063, 3133 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 592, 1003, 2210, 2491, 2540 |
| HpyF3I | CTNAG | 6 cut(s) | 92, 1268, 1748, 1866, 1874, 2306 |
| HpySE526I | ACGT | 6 cut(s) | 75, 103, 1341, 2865, 3063, 3133 |
| Hsp92I | GRCGYC | 1 cut(s) | 75 |
| HspAI | GCGC | 2 cut(s) | 2492, 2805 |
| Ksp22I | TGATCA | 3 cut(s) | 142, 1351, 2614 |
| KspAI | GTTAAC | 1 cut(s) | 1018 |
| LguI | GCTCTTC | 1 cut(s) | 2355 |
| LmnI | GCTCC | 9 cut(s) | 188, 423, 626, 1003, 1092, 2415, 2427, 2499, 2879 |
| Lsp1109I | GCAGC | 5 cut(s) | 252, 771, 928, 2369, 2922 |
| MaeI | CTAG | 9 cut(s) | 269, 705, 1047, 1160, 1232, 1578, 2093, 2432, 2987 |
| MaeII | ACGT | 6 cut(s) | 75, 103, 1341, 2865, 3063, 3133 |
| MfeI | CAATTG | 1 cut(s) | 2208 |
| MflI | RGATCY | 5 cut(s) | 207, 331, 1930, 2952, 3106 |
| MhlI | GDGCHC | 5 cut(s) | 225, 465, 1512, 1851, 2412 |
| MlsI | TGGCCA | 1 cut(s) | 2529 |
| MluI | ACGCGT | 1 cut(s) | 2098 |
| MluNI | TGGCCA | 1 cut(s) | 2529 |
| MlyI | GAGTC | 2 cut(s) | 693, 1281 |
| MmeI | TCCRAC | 5 cut(s) | 424, 1067, 1255, 2575, 3096 |
| Mox20I | TGGCCA | 1 cut(s) | 2529 |
| Mph1103I | ATGCAT | 2 cut(s) | 1716, 2206 |
| MroXI | GAANNNNTTC | 3 cut(s) | 801, 1494, 2328 |
| MscI | TGGCCA | 1 cut(s) | 2529 |
| MseI | TTAA | 9 cut(s) | 138, 378, 471, 1017, 1647, 1800, 2270, 2291, 3012 |
| MslI | CAYNNNNRTG | 4 cut(s) | 247, 418, 849, 1290 |
| Msp20I | TGGCCA | 1 cut(s) | 2529 |
| MspA1I | CMGCKG | 1 cut(s) | 2359 |
| MspI | CCGG | 2 cut(s) | 357, 1928 |
| MspR9I | CCNGG | 6 cut(s) | 37, 960, 1928, 2415, 2589, 3085 |
| MunI | CAATTG | 1 cut(s) | 2208 |
| Mva1269I | GAATGC | 2 cut(s) | 1325, 1716 |
| MvaI | CCWGG | 5 cut(s) | 37, 960, 2415, 2589, 3085 |
| MvnI | CGCG | 3 cut(s) | 48, 1191, 2100 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 592, 1003, 2210, 2491, 2540 |
| NciI | CCSGG | 1 cut(s) | 1928 |
| NcoI | CCATGG | 1 cut(s) | 64 |
| NdeI | CATATG | 2 cut(s) | 1078, 1105 |
| NlaIV | GGNNCC | 1 cut(s) | 1907 |
| NmuCI | GTSAC | 5 cut(s) | 872, 976, 1624, 2101, 2756 |
| NsiI | ATGCAT | 2 cut(s) | 1716, 2206 |
| NspI | RCATGY | 1 cut(s) | 2204 |
| NspV | TTCGAA | 3 cut(s) | 521, 2190, 2901 |
| PaeI | GCATGC | 1 cut(s) | 2204 |
| PaeR7I | CTCGAG | 1 cut(s) | 1844 |
| PceI | AGGCCT | 1 cut(s) | 2665 |
| PciSI | GCTCTTC | 1 cut(s) | 2355 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 209 |
| PctI | GAATGC | 2 cut(s) | 1325, 1716 |
| PdmI | GAANNNNTTC | 3 cut(s) | 801, 1494, 2328 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2689 |
| PfoI | TCCNGGA | 3 cut(s) | 958, 1926, 3083 |
| PkrI | GCNGC | 5 cut(s) | 267, 786, 918, 2384, 2912 |
| Ple19I | CGATCG | 1 cut(s) | 216 |
| PleI | GAGTC | 2 cut(s) | 693, 1280 |
| PpsI | GAGTC | 2 cut(s) | 693, 1280 |
| Ppu21I | YACGTR | 1 cut(s) | 104 |
| Psp124BI | GAGCTC | 1 cut(s) | 2412 |
| Psp6I | CCWGG | 5 cut(s) | 35, 958, 2413, 2587, 3083 |
| PspEI | GGTNACC | 1 cut(s) | 2981 |
| PspGI | CCWGG | 5 cut(s) | 35, 958, 2413, 2587, 3083 |
| PspN4I | GGNNCC | 1 cut(s) | 1907 |
| PspPI | GGNCC | 5 cut(s) | 68, 650, 956, 1905, 2958 |
| PspXI | VCTCGAGB | 1 cut(s) | 1844 |
| PstI | CTGCAG | 3 cut(s) | 658, 2387, 2608 |
| PsuI | RGATCY | 5 cut(s) | 207, 331, 1930, 2952, 3106 |
| PvuI | CGATCG | 1 cut(s) | 216 |
| PvuII | CAGCTG | 1 cut(s) | 2359 |
| RsaI | GTAC | 3 cut(s) | 1075, 1576, 2798 |
| RsaNI | GTAC | 3 cut(s) | 1074, 1575, 2797 |
| RseI | CAYNNNNRTG | 4 cut(s) | 247, 418, 849, 1290 |
| SacI | GAGCTC | 1 cut(s) | 2412 |
| SalI | GTCGAC | 2 cut(s) | 1343, 2867 |
| SapI | GCTCTTC | 1 cut(s) | 2355 |
| SaqAI | TTAA | 9 cut(s) | 138, 378, 471, 1017, 1647, 1800, 2270, 2291, 3012 |
| SatI | GCNGC | 5 cut(s) | 266, 785, 917, 2383, 2911 |
| Sau96I | GGNCC | 5 cut(s) | 68, 650, 956, 1905, 2958 |
| SbfI | CCTGCAGG | 1 cut(s) | 658 |
| SchI | GAGTC | 2 cut(s) | 693, 1281 |
| ScrFI | CCNGG | 6 cut(s) | 37, 960, 1928, 2415, 2589, 3085 |
| SdaI | CCTGCAGG | 1 cut(s) | 658 |
| SduI | GDGCHC | 5 cut(s) | 225, 465, 1512, 1851, 2412 |
| SfcI | CTRYAG | 3 cut(s) | 654, 2383, 2604 |
| Sfr274I | CTCGAG | 1 cut(s) | 1844 |
| SfuI | TTCGAA | 3 cut(s) | 521, 2190, 2901 |
| SgrDI | CGTCGACG | 1 cut(s) | 1343 |
| SinI | GGWCC | 5 cut(s) | 68, 650, 956, 1905, 2958 |
| SlaI | CTCGAG | 1 cut(s) | 1844 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 247, 418, 849, 1290 |
| SmlI | CTYRAG | 4 cut(s) | 923, 1844, 1883, 2119 |
| SmoI | CTYRAG | 4 cut(s) | 923, 1844, 1883, 2119 |
| SnaBI | TACGTA | 1 cut(s) | 104 |
| SpeI | ACTAGT | 1 cut(s) | 1577 |
| SphI | GCATGC | 1 cut(s) | 2204 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 658 |
| SseBI | AGGCCT | 1 cut(s) | 2665 |
| SsiI | CCGC | 5 cut(s) | 46, 1191, 1442, 1724, 2961 |
| SspI | AATATT | 2 cut(s) | 739, 2687 |
| SspMI | CTAG | 9 cut(s) | 269, 705, 1047, 1160, 1232, 1578, 2093, 2432, 2987 |
| SstI | GAGCTC | 1 cut(s) | 2412 |
| StuI | AGGCCT | 1 cut(s) | 2665 |
| StyD4I | CCNGG | 6 cut(s) | 35, 958, 1926, 2413, 2587, 3083 |
| StyI | CCWWGG | 1 cut(s) | 64 |
| TaaI | ACNGT | 3 cut(s) | 111, 316, 2464 |
| TaiI | ACGT | 6 cut(s) | 78, 106, 1344, 2868, 3066, 3136 |
| TaqII | GACCGA | 1 cut(s) | 15 |
| TatI | WGTACW | 2 cut(s) | 1073, 2796 |
| Tru1I | TTAA | 9 cut(s) | 138, 378, 471, 1017, 1647, 1800, 2270, 2291, 3012 |
| Tru9I | TTAA | 9 cut(s) | 138, 378, 471, 1017, 1647, 1800, 2270, 2291, 3012 |
| TscAI | CASTG | 1 cut(s) | 2460 |
| TseFI | GTSAC | 5 cut(s) | 872, 976, 1624, 2101, 2756 |
| TseI | GCWGC | 5 cut(s) | 265, 784, 916, 2382, 2910 |
| Tsp45I | GTSAC | 5 cut(s) | 872, 976, 1624, 2101, 2756 |
| TspDTI | ATGAA | 8 cut(s) | 498, 954, 2006, 2093, 2251, 2268, 2342, 2668 |
| TspGWI | ACGGA | 9 cut(s) | 68, 335, 339, 998, 1105, 1157, 1534, 2198, 2551 |
| TspRI | CASTG | 1 cut(s) | 2460 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2689 |
| VpaK11BI | GGWCC | 5 cut(s) | 68, 650, 956, 1905, 2958 |
| XapI | RAATTY | 6 cut(s) | 362, 1808, 1912, 2133, 2257, 2903 |
| XbaI | TCTAGA | 1 cut(s) | 2431 |
| XceI | RCATGY | 1 cut(s) | 2204 |
| XhoI | CTCGAG | 1 cut(s) | 1844 |
| XmiI | GTMKAC | 2 cut(s) | 1344, 2868 |
| XmnI | GAANNNNTTC | 3 cut(s) | 801, 1494, 2328 |
| XspI | CTAG | 9 cut(s) | 269, 705, 1047, 1160, 1232, 1578, 2093, 2432, 2987 |
| ZraI | GACGTC | 1 cut(s) | 76 |
| Zsp2I | ATGCAT | 2 cut(s) | 1716, 2206 |