AT5G41740

Disease resistance protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
16688626 .. 16693119
4494 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G41740.2

Sequence Viewer

Length: 3141 bp
ATGGCTTCTTCTTCTTCTTCATCTTCTTCGTCTCACATAAGGAGACACCATGTCTTTTCGCGCTTCCACGGTCCAGATGTCCGTAAAGGGTTTCTCAGTCATTTACACAGTCTCTTTGCAAGCAAAGGTATCACGACTTTCAATGATCAGAATATCGAGAGAGGCCAGACGATCGGACCTGAGCTCATACAAGGGATTAAAGAAGCTAGAGTCTCGATCGTTGTGCTCTCGAAGAATTACGCTTCTTCCAGCTGGTGTTTAGATGAACTTGTGGAAATCTTGAAGTGCAAAGAAGCTTTGGGGCAGATTGTGATGACGAGTGGAGTGTTCGGGAAAGCTTTTGAGAAGACTTGTCAAGGGAAAAATGAGGAGGTGAAGATCCGATGGAGAAATGCTTTGGCACATGTCGCTACCATTGCTGGGGAACACTCTCTTAATTGGGATAATGAAGCAAAGATGATCCAAAAGATTGCTACAGATGTTTCAGACAAACTGAATCTCACACCGTCGAGGGATTTTGAGGGGATGGTAGGGATGGAAGCTCACTTGAAAAGATTGAACTCTTTGTTATGCCTGGAAAGTGATGAAGTCAAGATGATTGGAATTTGGGGTCCAGCGGGAATTGGTAAGACTACCATTGCTAGAGCTTTATTCGACGACAGACTCTCTAGCAGTTTTCAACATAAATGTTTTATGGGGAACCTCAAGGGAAGTATTAAGGGTGTTGCTGACCATGATTCCAAGTTGAGGTTGCAAAAGCAACTTCTGTCTAAGATTTTTAAGGAAGAGAATATGAAGATACATCATTTAGGCGCAATACGAGAAAGGCTACACGATCAAAGAGTGCTCATCATTCTTGACGATGTAGATGATCTAAAGCAATTAGAGGTATTGGCTAAAGAAATCTCTTGGTTTGGTTCTGGAAGCCGAATCATCGGTACCACAGAAGATAAGAAGATTTTGAAGGCACATGGGATTCACAATATCTACCGTGTGGATTTTCCATCGAAGAAAGACGCTCTTGAGATCTTATGTCTCTCTGCATTCAAACAAAGCTCTATACCAGATGGTTTTGAAGAGCTTGCCAATAAAGTAGCTAAGCTTTGCAGCAACCTTCCATTAGGCCTTTGTGTCGTGGGTGCATCTTTGCGTGGGGAGGGCAATCAAGAGTGGGAACGTCTATTATCTAGGATCGAATCTAGTCTTGATAGGGATATCGATGACATATTACGAATCGGATATGACAGATTGTTGACGAATGATAAATCTCTATTCCTTCACATTGCATGCTTCTTCAACTATGCAAAGGTTGATAATGTGACAGCCTTGTTAGCTGACAGTAACTTGGATGTTGGAAATGGTTTCAATACCCTAGCCGATAGATCTCTCGTGCGTATATCTACCTATGATGATGGGATATCTGTGCTTTCTGATAGTAACTTGGATATAGTTCTTGAACAGTCTAAGGAGCCCGGGAAACGTGAATTTATAATTGAGCCAGAAGAGATTCGTGATGTACTGACAAATGAAACAGGTACTGGATCAGTCATTGGTATATCATTTGATACATCCAATATCGGAGAGGTTTCTGTAAGTAAGGATGCTTTTGAAGGAATGCGAAATCTCCGTTTCCTAAGAATCTATAGGTTGTTAGGTGGTGAAGTTACTTTGCAAATACCAGAAGATATGGATTATATACCTCGTCTTAGGTTACTATATTGGGATCGCTATCCAAGAAAAAGTCTTCCTCGGAGATTCAAGCCGGAACGTCTCGTGGAACTCCATATGCCACGCAGCAATCTCGAGCTGCTCTGGGGAGGAATCGAGCCCCTTCCTAATCTCAAGATCATAAATCTGAACCGATCCTATAGGTTGAAAGAAATCCCAAATCTTTCGAAAGCCACTAATCTCGAGAGATTGACACTTGAGAGCTGCTTAAGTTTGGTGGAGCTTCCCTCTTCTATTTCTAATCTACACAAACTGGAGATTCTAGATGTTAAATTCTGCTCTATGCTACAAGTTATTCCCACCAACATCAACTTAGCATCTCTTGAGAGACTCGACGTGAGTGGTTGCTCACGATTGAGAACTTTTCCAGATATCTCCAGTAACATCAAGACACTCATTTTCGGAAATATAAAGATAGAAGATGTCCCTCCATCAGTTGGATGTTGGTCTCGTCTTGATCAACTTCACATTAGCAGCCGAAGCCTCAAGAGATTGATGCATGTACCACCATGTATAACTTTGCTATCTCTGAGAGGTAGTGGTATAGAGAGGATTACAGATTGCGTCATAGGTCTCACTCGTCTACATTGGCTGAATGTCGATAGCTGCAGAAAACTCAAGTCAATTCTGGGTCTCCCCTCCTCCCTCAAGGTCCTAGATGCAAATGATTGTGTATCACTCAAGAGAGTACGCTTCTCTTTCCATAACCCAATGCACACACTCGATTTCAACAACTGTTTGAAACTGGATGAAGAAGCAAAAAGAGGAATCATACAACGATCAGTGTCCAGGTACATATGCTTACCATGTAAAAAGATCCCTGAAGAGTTCACTCACAAAGCAACAGGCAAATCCATAACCATCCCTCTGGCACCTGGTACTCTCTCTGCTTCCTCAAGGTTTAAGGCTTCCATTCTCATTTTGCCAGTTGAGAGCTACGAAACTGAAGGTATAAGTTGTAGTATAAGAACCAAAGGAGGTGTTGAAGTTCATTGCTGCGAGCTTCCATATCACTTTTTGCGTGTTCGGTCAGAACACCTGTTTATATTTCATGGTGACTTGTTTCCCCAAGGAAACAAATACCATGAAGTGGATGTGACTATGAGCGAGATTACATTTGAGTTCAGCCACACTAAAATCGGTGACAAGATTATTGAGTGTGGTGTACAGATCATGACAGAGGGAGCTGAGGGTGACAGTAGCAGGGAATTGGAAGTTTTGAAACTGAGAGTAGCAGCAGCCCAGTTGGGAGATTTGTTGGGAAATTTGAATTTGGAGGCAACAACAATCACCACACAGATGGAAATGGAGATGGAAACTATGAAGCAGAAGGTTCCAAGTTCTCTCAAGATGAAAACATCAAAACCAGCAAACGTTGGTTTTATGAGTTGGCTTCGGAAGCTTGGTCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1046

Amino Acids

117.44

Weight (kDa)

8.26

Isoelectric Point (pI)

43.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 16 - 178 3.2e-45 TIR domain
TIR_2 PF13676 29 - 98 4.8e-08 TIR domain
NB-ARC PF00931 180 - 352 1.5e-16 NB-ARC domain
WHD_ROQ1 PF23282 420 - 471 5.1e-12 Disease resistance protein Roq1-like, winged-helix domain
LRR_13 PF23286 611 - 805 3.8e-11 Disease resistance protein RPS4B-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1490
Acc65I GGTACC 1 cut(s) 938
AccB1I GGYRCC 2 cut(s) 938, 2599
AccB7I CCANNNNNTGG 2 cut(s) 2165, 2818
AccI GTMKAC 1 cut(s) 2311
AccII CGCG 1 cut(s) 61
AciI CCGC 1 cut(s) 617
AclI AACGTT 1 cut(s) 3102
AclWI GGATC 7 cut(s) 373, 454, 1199, 1549, 1731, 1857, 2539
AcsI RAATTY 5 cut(s) 603, 1484, 2000, 2992, 2998
AcuI CTGAAG 2 cut(s) 2571, 2694
AfaI GTAC 8 cut(s) 940, 1518, 1537, 2232, 2418, 2522, 2608, 2895
AfiI CCNNNNNNNGG 4 cut(s) 420, 747, 2165, 2818
AflII CTTAAG 1 cut(s) 1936
AflIII ACRYGT 1 cut(s) 403
AhdI GACNNNNNGTC 1 cut(s) 50
AjiI CACGTC 1 cut(s) 2065
AjnI CCWGG 3 cut(s) 573, 2516, 2602
Alw21I GWGCWC 3 cut(s) 186, 228, 849
AlwI GGATC 7 cut(s) 373, 454, 1199, 1549, 1731, 1857, 2539
AlwNI CAGNNNCTG 1 cut(s) 1538
Ama87I CYCGRG 3 cut(s) 1472, 1802, 1910
AoxI GGCC 2 cut(s) 163, 1123
ApeKI GCWGC 9 cut(s) 1107, 1794, 1807, 1932, 2202, 2334, 2724, 2963, 2966
ApoI RAATTY 5 cut(s) 603, 1484, 2000, 2992, 2998
Asp700I GAANNNNTTC 1 cut(s) 1506
Asp718I GGTACC 1 cut(s) 938
AspLEI GCGC 2 cut(s) 63, 815
AspS9I GGNCC 4 cut(s) 71, 176, 611, 2380
AsuC2I CCSGG 2 cut(s) 1473, 1474
AsuHPI GGTGA 6 cut(s) 385, 1670, 2795, 2882, 2933, 3010
AsuII TTCGAA 1 cut(s) 1895
AvaI CYCGRG 3 cut(s) 1472, 1802, 1910
AvaII GGWCC 4 cut(s) 71, 176, 611, 2380
BanI GGYRCC 2 cut(s) 938, 2599
BanII GRGCYC 3 cut(s) 186, 1473, 1830
BauI CACGAG 2 cut(s) 1388, 1772
BbsI GAAGAC 2 cut(s) 353, 1736
Bbv12I GWGCWC 3 cut(s) 186, 228, 849
BbvCI CCTCAGC 1 cut(s) 2916
BbvI GCAGC 9 cut(s) 1119, 1794, 1806, 1919, 2214, 2321, 2711, 2975, 2978
BcgI CGANNNNNNTGC 4 cut(s) 205, 239, 1783, 1817
BciT130I CCWGG 3 cut(s) 575, 2518, 2604
BclI TGATCA 2 cut(s) 145, 2185
BcnI CCSGG 2 cut(s) 1473, 1474
BfaI CTAG 8 cut(s) 207, 642, 669, 1188, 1200, 1373, 1991, 2384
BfmI CTRYAG 4 cut(s) 474, 1642, 1867, 2335
BfrI CTTAAG 1 cut(s) 1936
BglII AGATCT 2 cut(s) 1026, 1382
BisI GCNGC 9 cut(s) 1108, 1795, 1808, 1933, 2203, 2335, 2725, 2964, 2967
BlpI GCTNAGC 1 cut(s) 1098
BlsI GCNGC 9 cut(s) 1109, 1796, 1809, 1934, 2204, 2336, 2726, 2965, 2968
Bme1390I CCNGG 5 cut(s) 575, 1473, 1474, 2518, 2604
Bme18I GGWCC 4 cut(s) 71, 176, 611, 2380
BmeRI GACNNNNNGTC 1 cut(s) 50
BmeT110I CYCGRG 3 cut(s) 1472, 1802, 1910
BmgBI CACGTC 1 cut(s) 2065
BmgT120I GGNCC 4 cut(s) 71, 176, 611, 2380
BmiI GGNNCC 6 cut(s) 612, 701, 940, 1470, 2601, 3063
BmrFI CCNGG 5 cut(s) 575, 1473, 1474, 2518, 2604
BmrI ACTGGG 1 cut(s) 2965
BmsI GCATC 5 cut(s) 1151, 1591, 2054, 2214, 2377
BmuI ACTGGG 1 cut(s) 2965
BpiI GAAGAC 2 cut(s) 353, 1736
BplI GAGNNNNNCTC 2 cut(s) 1940, 1972
BpmI CTGGAG 2 cut(s) 2003, 2089
Bpu10I CCTNAGC 2 cut(s) 180, 2916
Bpu1102I GCTNAGC 1 cut(s) 1098
Bpu14I TTCGAA 1 cut(s) 1895
BpuMI CCSGG 2 cut(s) 1473, 1474
Bsa29I ATCGAT 1 cut(s) 1218
BsaBI GATNNNNATC 1 cut(s) 1728
BsaI GGTCTC 3 cut(s) 2181, 2306, 2366
BsaJI CCNNGG 4 cut(s) 67, 1472, 1748, 2797
Bsc4I CCNNNNNNNGG 4 cut(s) 420, 747, 2165, 2818
Bse1I ACTGG 6 cut(s) 1543, 1986, 2106, 2478, 2654, 2971
Bse3DI GCAATG 4 cut(s) 414, 636, 1281, 2719
Bse8I GATNNNNATC 1 cut(s) 1728
BseBI CCWGG 3 cut(s) 575, 2518, 2604
BseCI ATCGAT 1 cut(s) 1218
BseDI CCNNGG 4 cut(s) 67, 1472, 1748, 2797
BseGI GGATG 9 cut(s) 531, 540, 1354, 1568, 1606, 2174, 2482, 2589, 2827
BseJI GATNNNNATC 1 cut(s) 1728
BseLI CCNNNNNNNGG 4 cut(s) 420, 747, 2165, 2818
BseMI GCAATG 4 cut(s) 414, 636, 1281, 2719
BseMII CTCAG 5 cut(s) 109, 171, 2249, 2907, 2945
BseNI ACTGG 6 cut(s) 1543, 1986, 2106, 2478, 2654, 2971
BseRI GAGGAG 2 cut(s) 383, 2359
BseXI GCAGC 9 cut(s) 1119, 1794, 1806, 1919, 2214, 2321, 2711, 2975, 2978
BseYI CCCAGC 1 cut(s) 419
Bsh1236I CGCG 1 cut(s) 61
Bsh1285I CGRYCG 2 cut(s) 174, 219
BshFI GGCC 2 cut(s) 165, 1125
BshNI GGYRCC 2 cut(s) 938, 2599
BshVI ATCGAT 1 cut(s) 1218
BsiEI CGRYCG 2 cut(s) 174, 219
BsiHKAI GWGCWC 3 cut(s) 186, 228, 849
BsiHKCI CYCGRG 3 cut(s) 1472, 1802, 1910
BsiSI CCGG 2 cut(s) 1473, 1763
BslFI GGGAC 1 cut(s) 2138
BslI CCNNNNNNNGG 4 cut(s) 420, 747, 2165, 2818
BsmBI CGTCTC 2 cut(s) 36, 1775
BsmFI GGGAC 1 cut(s) 2138
BsmI GAATGC 2 cut(s) 1043, 1620
BsnI GGCC 2 cut(s) 165, 1125
Bso31I GGTCTC 3 cut(s) 2181, 2306, 2366
BsoBI CYCGRG 3 cut(s) 1472, 1802, 1910
Bsp119I TTCGAA 1 cut(s) 1895
Bsp1286I GDGCHC 5 cut(s) 186, 228, 849, 1473, 1830
Bsp1407I TGTACA 1 cut(s) 2893
Bsp1720I GCTNAGC 1 cut(s) 1098
BspACI CCGC 1 cut(s) 617
BspANI GGCC 2 cut(s) 165, 1125
BspCNI CTCAG 5 cut(s) 108, 172, 2250, 2908, 2946
BspDI ATCGAT 1 cut(s) 1218
BspFNI CGCG 1 cut(s) 61
BspHI TCATGA 1 cut(s) 2901
BspLI GGNNCC 6 cut(s) 612, 701, 940, 1470, 2601, 3063
BspMAI CTGCAG 1 cut(s) 2339
BspPI GGATC 7 cut(s) 373, 454, 1199, 1549, 1731, 1857, 2539
BspQI GCTCTTC 1 cut(s) 1071
BspT104I TTCGAA 1 cut(s) 1895
BspT107I GGYRCC 2 cut(s) 938, 2599
BspTI CTTAAG 1 cut(s) 1936
BspTNI GGTCTC 3 cut(s) 2181, 2306, 2366
BsrDI GCAATG 4 cut(s) 414, 636, 1281, 2719
BsrGI TGTACA 1 cut(s) 2893
BsrI ACTGG 6 cut(s) 1543, 1986, 2106, 2478, 2654, 2971
BssECI CCNNGG 4 cut(s) 67, 1472, 1748, 2797
BssSI CACGAG 2 cut(s) 1388, 1772
BssT1I CCWWGG 1 cut(s) 2797
Bst2BI CACGAG 2 cut(s) 1388, 1772
Bst2UI CCWGG 3 cut(s) 575, 2518, 2604
Bst4CI ACNGT 8 cut(s) 71, 110, 507, 992, 1340, 1461, 2465, 2927
Bst6I CTCTTC 5 cut(s) 780, 1071, 1497, 1963, 2547
BstAFI CTTAAG 1 cut(s) 1936
BstAUI TGTACA 1 cut(s) 2893
BstBI TTCGAA 1 cut(s) 1895
BstC8I GCNNGC 4 cut(s) 121, 1083, 1288, 2729
BstDSI CCRYGG 1 cut(s) 67
BstF5I GGATG 9 cut(s) 531, 540, 1354, 1568, 1606, 2174, 2482, 2589, 2827
BstFNI CGCG 1 cut(s) 61
BstHHI GCGC 2 cut(s) 63, 815
BstMCI CGRYCG 2 cut(s) 174, 219
BstMWI GCNNNNNNNGC 5 cut(s) 407, 416, 1331, 2208, 3127
BstNI CCWGG 3 cut(s) 575, 2518, 2604
BstNSI RCATGY 3 cut(s) 407, 1290, 2231
BstSCI CCNGG 5 cut(s) 573, 1471, 1472, 2516, 2602
BstSFI CTRYAG 4 cut(s) 474, 1642, 1867, 2335
BstUI CGCG 1 cut(s) 61
BstV1I GCAGC 9 cut(s) 1119, 1794, 1806, 1919, 2214, 2321, 2711, 2975, 2978
BstV2I GAAGAC 2 cut(s) 353, 1736
BstX2I RGATCY 4 cut(s) 378, 1026, 1382, 2544
BstXI CCANNNNNNTGG 2 cut(s) 2596, 3028
BstYI RGATCY 4 cut(s) 378, 1026, 1382, 2544
Bsu15I ATCGAT 1 cut(s) 1218
BsuRI GGCC 2 cut(s) 165, 1125
BsuTUI ATCGAT 1 cut(s) 1218
BtgI CCRYGG 1 cut(s) 67
BtrI CACGTC 1 cut(s) 2065
BtsCI GGATG 9 cut(s) 531, 540, 1354, 1568, 1606, 2174, 2482, 2589, 2827
BtsIMutI CAGTG 1 cut(s) 2517
Cac8I GCNNGC 4 cut(s) 121, 1083, 1288, 2729
CaiI CAGNNNCTG 1 cut(s) 1538
CciI TCATGA 1 cut(s) 2901
CfoI GCGC 2 cut(s) 63, 815
Cfr13I GGNCC 4 cut(s) 71, 176, 611, 2380
Cfr9I CCCGGG 1 cut(s) 1472
ClaI ATCGAT 1 cut(s) 1218
CseI GACGC 2 cut(s) 1025, 2281
CsiI ACCWGGT 1 cut(s) 2602
Csp6I GTAC 8 cut(s) 939, 1517, 1536, 2231, 2417, 2521, 2607, 2894
CviQI GTAC 8 cut(s) 939, 1517, 1536, 2231, 2417, 2521, 2607, 2894
DriI GACNNNNNGTC 1 cut(s) 50
Eam1104I CTCTTC 5 cut(s) 780, 1071, 1497, 1963, 2547
Eam1105I GACNNNNNGTC 1 cut(s) 50
EarI CTCTTC 5 cut(s) 780, 1071, 1497, 1963, 2547
Ecl136II GAGCTC 1 cut(s) 184
Eco130I CCWWGG 1 cut(s) 2797
Eco147I AGGCCT 1 cut(s) 1125
Eco24I GRGCYC 3 cut(s) 186, 1473, 1830
Eco31I GGTCTC 3 cut(s) 2181, 2306, 2366
Eco32I GATATC 3 cut(s) 1216, 1419, 2101
Eco47I GGWCC 4 cut(s) 71, 176, 611, 2380
Eco53kI GAGCTC 1 cut(s) 184
Eco57I CTGAAG 2 cut(s) 2571, 2694
Eco88I CYCGRG 3 cut(s) 1472, 1802, 1910
EcoICRI GAGCTC 1 cut(s) 184
EcoO109I RGGNCCY 1 cut(s) 2380
EcoRII CCWGG 3 cut(s) 573, 2516, 2602
EcoRV GATATC 3 cut(s) 1216, 1419, 2101
EcoT14I CCWWGG 1 cut(s) 2797
EcoT22I ATGCAT 1 cut(s) 2229
EcoT38I GRGCYC 3 cut(s) 186, 1473, 1830
ErhI CCWWGG 1 cut(s) 2797
Esp3I CGTCTC 2 cut(s) 36, 1775
FalI AAGNNNNNCTT 2 cut(s) 1005, 1037
FaqI GGGAC 1 cut(s) 2138
FauI CCCGC 1 cut(s) 610
FauNDI CATATG 2 cut(s) 1785, 2525
FbaI TGATCA 2 cut(s) 145, 2185
FblI GTMKAC 1 cut(s) 2311
Fnu4HI GCNGC 9 cut(s) 1108, 1795, 1808, 1933, 2203, 2335, 2725, 2964, 2967
FokI GGATG 9 cut(s) 538, 547, 1361, 1555, 1613, 2181, 2489, 2576, 2834
FriOI GRGCYC 3 cut(s) 186, 1473, 1830
Fsp4HI GCNGC 9 cut(s) 1108, 1795, 1808, 1933, 2203, 2335, 2725, 2964, 2967
FspBI CTAG 8 cut(s) 207, 642, 669, 1188, 1200, 1373, 1991, 2384
GlaI GCGC 2 cut(s) 62, 814
GluI GCNGC 9 cut(s) 1108, 1795, 1808, 1933, 2203, 2335, 2725, 2964, 2967
GsaI CCCAGC 1 cut(s) 423
GsuI CTGGAG 2 cut(s) 2003, 2089
HaeIII GGCC 2 cut(s) 165, 1125
HapII CCGG 2 cut(s) 1473, 1763
HgaI GACGC 2 cut(s) 1025, 2281
HhaI GCGC 2 cut(s) 63, 815
Hin6I GCGC 2 cut(s) 61, 813
HinP1I GCGC 2 cut(s) 61, 813
HincII GTYRAC 1 cut(s) 1254
HindII GTYRAC 1 cut(s) 1254
HindIII AAGCTT 4 cut(s) 294, 336, 1100, 3128
HpaII CCGG 2 cut(s) 1473, 1763
HphI GGTGA 6 cut(s) 385, 1670, 2795, 2882, 2933, 3010
Hpy166II GTNNAC 4 cut(s) 1254, 2312, 2559, 2894
Hpy8I GTNNAC 4 cut(s) 1254, 2312, 2559, 2894
Hpy99I CGWCG 3 cut(s) 511, 659, 2066
HpyAV CCTTC 7 cut(s) 958, 1124, 1286, 1604, 1841, 2669, 3052
HpyCH4III ACNGT 8 cut(s) 71, 110, 507, 992, 1340, 1461, 2465, 2927
HpyCH4IV ACGT 5 cut(s) 1177, 1480, 1768, 2064, 3102
HpyF10VI GCNNNNNNNGC 5 cut(s) 407, 416, 1331, 2208, 3127
HpySE526I ACGT 5 cut(s) 1177, 1480, 1768, 2064, 3102
HspAI GCGC 2 cut(s) 61, 813
KpnI GGTACC 1 cut(s) 942
Ksp22I TGATCA 2 cut(s) 145, 2185
LguI GCTCTTC 1 cut(s) 1071
LmnI GCTCC 3 cut(s) 1468, 1948, 2912
Lsp1109I GCAGC 9 cut(s) 1119, 1794, 1806, 1919, 2214, 2321, 2711, 2975, 2978
LweI GCATC 5 cut(s) 1151, 1591, 2054, 2214, 2377
MabI ACCWGGT 1 cut(s) 2602
MaeI CTAG 8 cut(s) 207, 642, 669, 1188, 1200, 1373, 1991, 2384
MaeII ACGT 5 cut(s) 1177, 1480, 1768, 2064, 3102
MflI RGATCY 4 cut(s) 378, 1026, 1382, 2544
MhlI GDGCHC 5 cut(s) 186, 228, 849, 1473, 1830
MlyI GAGTC 3 cut(s) 219, 657, 2052
MmeI TCCRAC 2 cut(s) 1333, 2146
Mph1103I ATGCAT 1 cut(s) 2229
MroXI GAANNNNTTC 1 cut(s) 1506
MseI TTAA 7 cut(s) 198, 435, 717, 780, 1937, 1998, 2631
MslI CAYNNNNRTG 1 cut(s) 3026
MspA1I CMGCKG 2 cut(s) 252, 617
MspCI CTTAAG 1 cut(s) 1936
MspI CCGG 2 cut(s) 1473, 1763
MspR9I CCNGG 5 cut(s) 575, 1473, 1474, 2518, 2604
Mva1269I GAATGC 2 cut(s) 1043, 1620
MvaI CCWGG 3 cut(s) 575, 2518, 2604
MvnI CGCG 1 cut(s) 61
MwoI GCNNNNNNNGC 5 cut(s) 407, 416, 1331, 2208, 3127
NciI CCSGG 2 cut(s) 1473, 1474
NdeI CATATG 2 cut(s) 1785, 2525
NlaIV GGNNCC 6 cut(s) 612, 701, 940, 1470, 2601, 3063
NmuCI GTSAC 5 cut(s) 1318, 2783, 2824, 2870, 2921
NsiI ATGCAT 1 cut(s) 2229
NspI RCATGY 3 cut(s) 407, 1290, 2231
NspV TTCGAA 1 cut(s) 1895
PaeI GCATGC 1 cut(s) 1290
PaeR7I CTCGAG 2 cut(s) 1802, 1910
PagI TCATGA 1 cut(s) 2901
PceI AGGCCT 1 cut(s) 1125
PciI ACATGT 1 cut(s) 403
PciSI GCTCTTC 1 cut(s) 1071
PctI GAATGC 2 cut(s) 1043, 1620
PdmI GAANNNNTTC 1 cut(s) 1506
PflMI CCANNNNNTGG 2 cut(s) 2165, 2818
PkrI GCNGC 9 cut(s) 1109, 1796, 1809, 1934, 2204, 2336, 2726, 2965, 2968
Ple19I CGATCG 2 cut(s) 174, 219
PleI GAGTC 3 cut(s) 218, 657, 2052
PpsI GAGTC 3 cut(s) 218, 657, 2052
PpuMI RGGWCCY 1 cut(s) 2380
PscI ACATGT 1 cut(s) 403
PsiI TTATAA 1 cut(s) 1490
Psp124BI GAGCTC 1 cut(s) 186
Psp1406I AACGTT 1 cut(s) 3102
Psp5II RGGWCCY 1 cut(s) 2380
Psp6I CCWGG 3 cut(s) 573, 2516, 2602
PspFI CCCAGC 1 cut(s) 419
PspGI CCWGG 3 cut(s) 573, 2516, 2602
PspN4I GGNNCC 6 cut(s) 612, 701, 940, 1470, 2601, 3063
PspPI GGNCC 4 cut(s) 71, 176, 611, 2380
PspPPI RGGWCCY 1 cut(s) 2380
PstI CTGCAG 1 cut(s) 2339
PstNI CAGNNNCTG 1 cut(s) 1538
PsuI RGATCY 4 cut(s) 378, 1026, 1382, 2544
PvuI CGATCG 2 cut(s) 174, 219
PvuII CAGCTG 1 cut(s) 252
RsaI GTAC 8 cut(s) 940, 1518, 1537, 2232, 2418, 2522, 2608, 2895
RsaNI GTAC 8 cut(s) 939, 1517, 1536, 2231, 2417, 2521, 2607, 2894
RseI CAYNNNNRTG 1 cut(s) 3026
SacI GAGCTC 1 cut(s) 186
SapI GCTCTTC 1 cut(s) 1071
SaqAI TTAA 7 cut(s) 198, 435, 717, 780, 1937, 1998, 2631
SatI GCNGC 9 cut(s) 1108, 1795, 1808, 1933, 2203, 2335, 2725, 2964, 2967
Sau96I GGNCC 4 cut(s) 71, 176, 611, 2380
SchI GAGTC 3 cut(s) 219, 657, 2052
ScrFI CCNGG 5 cut(s) 575, 1473, 1474, 2518, 2604
SduI GDGCHC 5 cut(s) 186, 228, 849, 1473, 1830
SexAI ACCWGGT 1 cut(s) 2602
SfaNI GCATC 5 cut(s) 1151, 1591, 2054, 2214, 2377
SfcI CTRYAG 4 cut(s) 474, 1642, 1867, 2335
Sfr274I CTCGAG 2 cut(s) 1802, 1910
SfuI TTCGAA 1 cut(s) 1895
SinI GGWCC 4 cut(s) 71, 176, 611, 2380
SlaI CTCGAG 2 cut(s) 1802, 1910
SmaI CCCGGG 1 cut(s) 1474
SmiMI CAYNNNNRTG 1 cut(s) 3026
SphI GCATGC 1 cut(s) 1290
SseBI AGGCCT 1 cut(s) 1125
SsiI CCGC 1 cut(s) 617
SspMI CTAG 8 cut(s) 207, 642, 669, 1188, 1200, 1373, 1991, 2384
SstI GAGCTC 1 cut(s) 186
StuI AGGCCT 1 cut(s) 1125
StyD4I CCNGG 5 cut(s) 573, 1471, 1472, 2516, 2602
StyI CCWWGG 1 cut(s) 2797
TaaI ACNGT 8 cut(s) 71, 110, 507, 992, 1340, 1461, 2465, 2927
TaiI ACGT 5 cut(s) 1180, 1483, 1771, 2067, 3105
TaqII GACCGA 1 cut(s) 2745
TatI WGTACW 2 cut(s) 1516, 2893
Tru1I TTAA 7 cut(s) 198, 435, 717, 780, 1937, 1998, 2631
Tru9I TTAA 7 cut(s) 198, 435, 717, 780, 1937, 1998, 2631
TscAI CASTG 1 cut(s) 2517
TseFI GTSAC 5 cut(s) 1318, 2783, 2824, 2870, 2921
TseI GCWGC 9 cut(s) 1107, 1794, 1807, 1932, 2202, 2334, 2724, 2963, 2966
Tsp45I GTSAC 5 cut(s) 1318, 2783, 2824, 2870, 2921
TspGWI ACGGA 2 cut(s) 71, 1616
TspMI CCCGGG 1 cut(s) 1472
TspRI CASTG 1 cut(s) 2517
Van91I CCANNNNNTGG 2 cut(s) 2165, 2818
Vha464I CTTAAG 1 cut(s) 1936
VpaK11BI GGWCC 4 cut(s) 71, 176, 611, 2380
XapI RAATTY 5 cut(s) 603, 1484, 2000, 2992, 2998
XbaI TCTAGA 1 cut(s) 1990
XceI RCATGY 3 cut(s) 407, 1290, 2231
XhoI CTCGAG 2 cut(s) 1802, 1910
XmaI CCCGGG 1 cut(s) 1472
XmiI GTMKAC 1 cut(s) 2311
XmnI GAANNNNTTC 1 cut(s) 1506
XspI CTAG 8 cut(s) 207, 642, 669, 1188, 1200, 1373, 1991, 2384
Zsp2I ATGCAT 1 cut(s) 2229
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.