TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 15 - 189 | 4.3e-61 | TIR domain |
| TIR_2 | PF13676 | 17 - 112 | 2.9e-10 | TIR domain |
| NB-ARC | PF00931 | 192 - 362 | 2.4e-12 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 430 - 502 | 1.5e-11 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_3 | PF07725 | 604 - 623 | 1.5e-10 | Leucine Rich Repeat |
| LRR_13 | PF23286 | 625 - 843 | 1.7e-07 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 2733 |
| AatII | GACGTC | 2 cut(s) | 78, 2056 |
| Acc36I | ACCTGC | 2 cut(s) | 1580, 2608 |
| AccI | GTMKAC | 1 cut(s) | 2056 |
| AccII | CGCG | 2 cut(s) | 2201, 2536 |
| AciI | CCGC | 6 cut(s) | 79, 784, 1074, 1183, 2199, 3075 |
| AclWI | GGATC | 5 cut(s) | 158, 215, 1588, 1679, 2532 |
| AcsI | RAATTY | 5 cut(s) | 2192, 2629, 2888, 3011, 3263 |
| AcuI | CTGAAG | 2 cut(s) | 1143, 3227 |
| AcvI | CACGTG | 1 cut(s) | 1027 |
| AcyI | GRCGYC | 2 cut(s) | 75, 2053 |
| AfaI | GTAC | 5 cut(s) | 330, 670, 696, 2598, 2787 |
| AfeI | AGCGCT | 1 cut(s) | 1636 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 475 |
| AflIII | ACRYGT | 2 cut(s) | 386, 2362 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 74 |
| AjiI | CACGTC | 2 cut(s) | 29, 2397 |
| AjnI | CCWGG | 3 cut(s) | 35, 952, 2584 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1290, 1322 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2834, 2866 |
| Alw21I | GWGCWC | 4 cut(s) | 394, 1716, 2578, 2886 |
| Alw26I | GTCTC | 2 cut(s) | 2030, 2171 |
| Alw44I | GTGCAC | 1 cut(s) | 1712 |
| AlwI | GGATC | 5 cut(s) | 158, 215, 1588, 1679, 2532 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2511 |
| Ama87I | CYCGRG | 1 cut(s) | 1844 |
| Aor51HI | AGCGCT | 1 cut(s) | 1636 |
| ApaLI | GTGCAC | 1 cut(s) | 1712 |
| ApeKI | GCWGC | 3 cut(s) | 1118, 1870, 2895 |
| ApoI | RAATTY | 5 cut(s) | 2192, 2629, 2888, 3011, 3263 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2765, 2797 |
| AspLEI | GCGC | 3 cut(s) | 1442, 1637, 2536 |
| AspS9I | GGNCC | 3 cut(s) | 68, 647, 950 |
| AsuC2I | CCSGG | 1 cut(s) | 2846 |
| AsuHPI | GGTGA | 2 cut(s) | 2068, 2851 |
| AvaI | CYCGRG | 1 cut(s) | 1844 |
| AvaII | GGWCC | 3 cut(s) | 68, 647, 950 |
| BaeGI | GKGCMC | 1 cut(s) | 1716 |
| BanII | GRGCYC | 1 cut(s) | 2578 |
| BauI | CACGAG | 3 cut(s) | 55, 1774, 2284 |
| BbrPI | CACGTG | 1 cut(s) | 1027 |
| BbsI | GAAGAC | 4 cut(s) | 43, 310, 1315, 2342 |
| Bbv12I | GWGCWC | 4 cut(s) | 394, 1716, 2578, 2886 |
| BbvI | GCAGC | 3 cut(s) | 1105, 1857, 2907 |
| BciT130I | CCWGG | 3 cut(s) | 37, 954, 2586 |
| BclI | TGATCA | 2 cut(s) | 142, 2692 |
| BcnI | CCSGG | 1 cut(s) | 2846 |
| BcoDI | GTCTC | 2 cut(s) | 2030, 2171 |
| BfaI | CTAG | 7 cut(s) | 546, 821, 911, 1485, 1902, 2415, 2868 |
| BfmI | CTRYAG | 3 cut(s) | 651, 2682, 2979 |
| BfoI | RGCGCY | 2 cut(s) | 1443, 1638 |
| BfuAI | ACCTGC | 2 cut(s) | 1580, 2608 |
| BglII | AGATCT | 1 cut(s) | 2937 |
| BisI | GCNGC | 3 cut(s) | 1119, 1871, 2896 |
| BlsI | GCNGC | 3 cut(s) | 1120, 1872, 2897 |
| Bme1390I | CCNGG | 4 cut(s) | 37, 954, 2586, 2846 |
| Bme18I | GGWCC | 3 cut(s) | 68, 647, 950 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 74 |
| BmeT110I | CYCGRG | 1 cut(s) | 1844 |
| BmgBI | CACGTC | 2 cut(s) | 29, 2397 |
| BmgT120I | GGNCC | 3 cut(s) | 68, 647, 950 |
| BmiI | GGNNCC | 1 cut(s) | 425 |
| BmrFI | CCNGG | 4 cut(s) | 37, 954, 2586, 2846 |
| BmrI | ACTGGG | 1 cut(s) | 484 |
| BmsI | GCATC | 4 cut(s) | 913, 1756, 2105, 2349 |
| BmuI | ACTGGG | 1 cut(s) | 484 |
| BpiI | GAAGAC | 4 cut(s) | 43, 310, 1315, 2342 |
| BpmI | CTGGAG | 5 cut(s) | 58, 378, 477, 1973, 2477 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1638, 1748 |
| BpuEI | CTTGAG | 1 cut(s) | 2243 |
| BpuMI | CCSGG | 1 cut(s) | 2846 |
| BsaAI | YACGTR | 2 cut(s) | 1027, 2363 |
| BsaBI | GATNNNNATC | 1 cut(s) | 212 |
| BsaHI | GRCGYC | 2 cut(s) | 75, 2053 |
| BsaJI | CCNNGG | 4 cut(s) | 64, 1511, 1688, 3170 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 475 |
| Bse1I | ACTGG | 6 cut(s) | 246, 361, 479, 1208, 1702, 2460 |
| Bse3DI | GCAATG | 5 cut(s) | 672, 1178, 1314, 2044, 2399 |
| Bse8I | GATNNNNATC | 1 cut(s) | 212 |
| BseBI | CCWGG | 3 cut(s) | 37, 954, 2586 |
| BseDI | CCNNGG | 4 cut(s) | 64, 1511, 1688, 3170 |
| BseGI | GGATG | 8 cut(s) | 265, 331, 1355, 1771, 1997, 2120, 2800, 2953 |
| BseJI | GATNNNNATC | 1 cut(s) | 212 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 475 |
| BseMI | GCAATG | 5 cut(s) | 672, 1178, 1314, 2044, 2399 |
| BseMII | CTCAG | 3 cut(s) | 106, 1880, 2772 |
| BseNI | ACTGG | 6 cut(s) | 246, 361, 479, 1208, 1702, 2460 |
| BseRI | GAGGAG | 2 cut(s) | 419, 1739 |
| BseSI | GKGCMC | 1 cut(s) | 1716 |
| BseXI | GCAGC | 3 cut(s) | 1105, 1857, 2907 |
| BseYI | CCCAGC | 1 cut(s) | 175 |
| BsgI | GTGCAG | 1 cut(s) | 2586 |
| Bsh1236I | CGCG | 2 cut(s) | 2201, 2536 |
| BsiHKAI | GWGCWC | 4 cut(s) | 394, 1716, 2578, 2886 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1844 |
| BsiSI | CCGG | 2 cut(s) | 1832, 2846 |
| BslFI | GGGAC | 1 cut(s) | 491 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 475 |
| BsmAI | GTCTC | 2 cut(s) | 2030, 2171 |
| BsmBI | CGTCTC | 1 cut(s) | 2030 |
| BsmFI | GGGAC | 1 cut(s) | 491 |
| BsmI | GAATGC | 2 cut(s) | 1659, 1979 |
| BsoBI | CYCGRG | 1 cut(s) | 1844 |
| Bsp1286I | GDGCHC | 4 cut(s) | 394, 1716, 2578, 2886 |
| Bsp19I | CCATGG | 1 cut(s) | 64 |
| BspACI | CCGC | 6 cut(s) | 79, 784, 1074, 1183, 2199, 3075 |
| BspCNI | CTCAG | 3 cut(s) | 105, 1879, 2771 |
| BspFNI | CGCG | 2 cut(s) | 2201, 2536 |
| BspHI | TCATGA | 1 cut(s) | 739 |
| BspLI | GGNNCC | 1 cut(s) | 425 |
| BspMAI | CTGCAG | 2 cut(s) | 655, 2983 |
| BspMI | ACCTGC | 2 cut(s) | 1580, 2608 |
| BspPI | GGATC | 5 cut(s) | 158, 215, 1588, 1679, 2532 |
| BsrDI | GCAATG | 5 cut(s) | 672, 1178, 1314, 2044, 2399 |
| BsrI | ACTGG | 6 cut(s) | 246, 361, 479, 1208, 1702, 2460 |
| BssECI | CCNNGG | 4 cut(s) | 64, 1511, 1688, 3170 |
| BssNI | GRCGYC | 2 cut(s) | 75, 2053 |
| BssSI | CACGAG | 3 cut(s) | 55, 1774, 2284 |
| BssT1I | CCWWGG | 2 cut(s) | 64, 1511 |
| Bst2BI | CACGAG | 3 cut(s) | 55, 1774, 2284 |
| Bst2UI | CCWGG | 3 cut(s) | 37, 954, 2586 |
| Bst6I | CTCTTC | 1 cut(s) | 3170 |
| BstACI | GRCGYC | 2 cut(s) | 75, 2053 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1468 |
| BstBAI | YACGTR | 2 cut(s) | 1027, 2363 |
| BstC8I | GCNNGC | 6 cut(s) | 655, 1365, 1841, 1875, 2440, 2574 |
| BstDEI | CTNAG | 8 cut(s) | 92, 627, 1638, 1748, 1866, 2032, 2207, 2758 |
| BstDSI | CCRYGG | 2 cut(s) | 64, 1688 |
| BstF5I | GGATG | 8 cut(s) | 265, 331, 1355, 1771, 1997, 2120, 2800, 2953 |
| BstFNI | CGCG | 2 cut(s) | 2201, 2536 |
| BstH2I | RGCGCY | 2 cut(s) | 1443, 1638 |
| BstHHI | GCGC | 3 cut(s) | 1442, 1637, 2536 |
| BstMAI | GTCTC | 2 cut(s) | 2030, 2171 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 1127, 1468, 1849, 2218, 2540 |
| BstNI | CCWGG | 3 cut(s) | 37, 954, 2586 |
| BstNSI | RCATGY | 4 cut(s) | 390, 1166, 1343, 1831 |
| BstSCI | CCNGG | 4 cut(s) | 35, 952, 2584, 2844 |
| BstSFI | CTRYAG | 3 cut(s) | 651, 2682, 2979 |
| BstSLI | GKGCMC | 1 cut(s) | 1716 |
| BstUI | CGCG | 2 cut(s) | 2201, 2536 |
| BstV1I | GCAGC | 3 cut(s) | 1105, 1857, 2907 |
| BstV2I | GAAGAC | 4 cut(s) | 43, 310, 1315, 2342 |
| BstX2I | RGATCY | 1 cut(s) | 2937 |
| BstYI | RGATCY | 1 cut(s) | 2937 |
| BtgI | CCRYGG | 2 cut(s) | 64, 1688 |
| BtgZI | GCGATG | 2 cut(s) | 154, 436 |
| BtrI | CACGTC | 2 cut(s) | 29, 2397 |
| BtsCI | GGATG | 8 cut(s) | 265, 331, 1355, 1771, 1997, 2120, 2800, 2953 |
| BtsI | GCAGTG | 1 cut(s) | 2254 |
| BtsIMutI | CAGTG | 8 cut(s) | 975, 1018, 2254, 2320, 2453, 2603, 2769, 3145 |
| BveI | ACCTGC | 2 cut(s) | 1580, 2608 |
| Cac8I | GCNNGC | 6 cut(s) | 655, 1365, 1841, 1875, 2440, 2574 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2511 |
| CciI | TCATGA | 1 cut(s) | 739 |
| CfoI | GCGC | 3 cut(s) | 1442, 1637, 2536 |
| Cfr13I | GGNCC | 3 cut(s) | 68, 647, 950 |
| CseI | GACGC | 4 cut(s) | 1946, 2190, 3043, 3069 |
| Csp6I | GTAC | 5 cut(s) | 329, 669, 695, 2597, 2786 |
| CviQI | GTAC | 5 cut(s) | 329, 669, 695, 2597, 2786 |
| DdeI | CTNAG | 8 cut(s) | 92, 627, 1638, 1748, 1866, 2032, 2207, 2758 |
| DraI | TTTAAA | 1 cut(s) | 2478 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2733 |
| DriI | GACNNNNNGTC | 1 cut(s) | 74 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2733 |
| Eam1104I | CTCTTC | 1 cut(s) | 3170 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 74 |
| EarI | CTCTTC | 1 cut(s) | 3170 |
| Ecl136II | GAGCTC | 1 cut(s) | 2576 |
| Eco130I | CCWWGG | 2 cut(s) | 64, 1511 |
| Eco24I | GRGCYC | 1 cut(s) | 2578 |
| Eco32I | GATATC | 2 cut(s) | 2101, 3127 |
| Eco47I | GGWCC | 3 cut(s) | 68, 647, 950 |
| Eco47III | AGCGCT | 1 cut(s) | 1636 |
| Eco53kI | GAGCTC | 1 cut(s) | 2576 |
| Eco57I | CTGAAG | 2 cut(s) | 1143, 3227 |
| Eco72I | CACGTG | 1 cut(s) | 1027 |
| Eco88I | CYCGRG | 1 cut(s) | 1844 |
| EcoICRI | GAGCTC | 1 cut(s) | 2576 |
| EcoRI | GAATTC | 2 cut(s) | 2888, 3011 |
| EcoRII | CCWGG | 3 cut(s) | 35, 952, 2584 |
| EcoRV | GATATC | 2 cut(s) | 2101, 3127 |
| EcoT14I | CCWWGG | 2 cut(s) | 64, 1511 |
| EcoT22I | ATGCAT | 1 cut(s) | 1771 |
| EcoT38I | GRGCYC | 1 cut(s) | 2578 |
| ErhI | CCWWGG | 2 cut(s) | 64, 1511 |
| Esp3I | CGTCTC | 1 cut(s) | 2030 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 783, 815, 2458, 2490 |
| FaqI | GGGAC | 1 cut(s) | 491 |
| FauI | CCCGC | 2 cut(s) | 1176, 2206 |
| FauNDI | CATATG | 1 cut(s) | 2835 |
| FbaI | TGATCA | 2 cut(s) | 142, 2692 |
| FblI | GTMKAC | 1 cut(s) | 2056 |
| Fnu4HI | GCNGC | 3 cut(s) | 1119, 1871, 2896 |
| FokI | GGATG | 8 cut(s) | 272, 318, 1342, 1778, 1984, 2127, 2807, 2960 |
| FriOI | GRGCYC | 1 cut(s) | 2578 |
| Fsp4HI | GCNGC | 3 cut(s) | 1119, 1871, 2896 |
| FspBI | CTAG | 7 cut(s) | 546, 821, 911, 1485, 1902, 2415, 2868 |
| GlaI | GCGC | 3 cut(s) | 1441, 1636, 2535 |
| GluI | GCNGC | 3 cut(s) | 1119, 1871, 2896 |
| GsaI | CCCAGC | 1 cut(s) | 179 |
| GsuI | CTGGAG | 5 cut(s) | 58, 378, 477, 1973, 2477 |
| HaeII | RGCGCY | 2 cut(s) | 1443, 1638 |
| HapII | CCGG | 2 cut(s) | 1832, 2846 |
| HgaI | GACGC | 4 cut(s) | 1946, 2190, 3043, 3069 |
| HhaI | GCGC | 3 cut(s) | 1442, 1637, 2536 |
| Hin1I | GRCGYC | 2 cut(s) | 75, 2053 |
| Hin6I | GCGC | 3 cut(s) | 1440, 1635, 2534 |
| HinP1I | GCGC | 3 cut(s) | 1440, 1635, 2534 |
| HincII | GTYRAC | 1 cut(s) | 435 |
| HindII | GTYRAC | 1 cut(s) | 435 |
| HindIII | AAGCTT | 4 cut(s) | 1050, 1133, 1750, 2408 |
| HpaII | CCGG | 2 cut(s) | 1832, 2846 |
| HphI | GGTGA | 2 cut(s) | 2068, 2851 |
| Hpy188I | TCNGA | 9 cut(s) | 340, 523, 1201, 3067, 3085, 3148, 3160, 3171, 3207 |
| Hpy99I | CGWCG | 3 cut(s) | 33, 1820, 3059 |
| HpyAV | CCTTC | 7 cut(s) | 345, 746, 871, 1565, 1796, 1853, 1912 |
| HpyCH4IV | ACGT | 7 cut(s) | 28, 75, 1026, 1605, 2053, 2362, 2396 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 1127, 1468, 1849, 2218, 2540 |
| HpyF3I | CTNAG | 8 cut(s) | 92, 627, 1638, 1748, 1866, 2032, 2207, 2758 |
| HpySE526I | ACGT | 7 cut(s) | 28, 75, 1026, 1605, 2053, 2362, 2396 |
| Hsp92I | GRCGYC | 2 cut(s) | 75, 2053 |
| HspAI | GCGC | 3 cut(s) | 1440, 1635, 2534 |
| Ksp22I | TGATCA | 2 cut(s) | 142, 2692 |
| LmnI | GCTCC | 5 cut(s) | 406, 423, 623, 1954, 3077 |
| Lsp1109I | GCAGC | 3 cut(s) | 1105, 1857, 2907 |
| LweI | GCATC | 4 cut(s) | 913, 1756, 2105, 2349 |
| MaeI | CTAG | 7 cut(s) | 546, 821, 911, 1485, 1902, 2415, 2868 |
| MaeII | ACGT | 7 cut(s) | 28, 75, 1026, 1605, 2053, 2362, 2396 |
| MaeIII | GTNAC | 6 cut(s) | 786, 970, 1351, 2202, 2290, 3024 |
| MflI | RGATCY | 1 cut(s) | 2937 |
| MhlI | GDGCHC | 4 cut(s) | 394, 1716, 2578, 2886 |
| MlyI | GAGTC | 3 cut(s) | 605, 916, 2237 |
| MmeI | TCCRAC | 3 cut(s) | 249, 616, 2093 |
| Mph1103I | ATGCAT | 1 cut(s) | 1771 |
| MseI | TTAA | 7 cut(s) | 114, 1055, 1397, 1625, 2477, 2636, 3261 |
| MslI | CAYNNNNRTG | 2 cut(s) | 846, 2425 |
| MspA1I | CMGCKG | 1 cut(s) | 1870 |
| MspI | CCGG | 2 cut(s) | 1832, 2846 |
| MspR9I | CCNGG | 4 cut(s) | 37, 954, 2586, 2846 |
| Mva1269I | GAATGC | 2 cut(s) | 1659, 1979 |
| MvaI | CCWGG | 3 cut(s) | 37, 954, 2586 |
| MvnI | CGCG | 2 cut(s) | 2201, 2536 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 1127, 1468, 1849, 2218, 2540 |
| NciI | CCSGG | 1 cut(s) | 2846 |
| NcoI | CCATGG | 1 cut(s) | 64 |
| NdeI | CATATG | 1 cut(s) | 2835 |
| NlaIV | GGNNCC | 1 cut(s) | 425 |
| NmuCI | GTSAC | 3 cut(s) | 970, 1351, 2202 |
| NsiI | ATGCAT | 1 cut(s) | 1771 |
| NspI | RCATGY | 4 cut(s) | 390, 1166, 1343, 1831 |
| PaeR7I | CTCGAG | 1 cut(s) | 1844 |
| PagI | TCATGA | 1 cut(s) | 739 |
| PciI | ACATGT | 1 cut(s) | 386 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 2402, 2533 |
| PctI | GAATGC | 2 cut(s) | 1659, 1979 |
| PfoI | TCCNGGA | 1 cut(s) | 952 |
| PkrI | GCNGC | 3 cut(s) | 1120, 1872, 2897 |
| PleI | GAGTC | 3 cut(s) | 604, 915, 2236 |
| PmaCI | CACGTG | 1 cut(s) | 1027 |
| PmlI | CACGTG | 1 cut(s) | 1027 |
| PpsI | GAGTC | 3 cut(s) | 604, 915, 2236 |
| Ppu21I | YACGTR | 2 cut(s) | 1027, 2363 |
| PscI | ACATGT | 1 cut(s) | 386 |
| Psp124BI | GAGCTC | 1 cut(s) | 2578 |
| Psp6I | CCWGG | 3 cut(s) | 35, 952, 2584 |
| PspCI | CACGTG | 1 cut(s) | 1027 |
| PspFI | CCCAGC | 1 cut(s) | 175 |
| PspGI | CCWGG | 3 cut(s) | 35, 952, 2584 |
| PspN4I | GGNNCC | 1 cut(s) | 425 |
| PspPI | GGNCC | 3 cut(s) | 68, 647, 950 |
| PstI | CTGCAG | 2 cut(s) | 655, 2983 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2511 |
| PsuI | RGATCY | 1 cut(s) | 2937 |
| PvuII | CAGCTG | 1 cut(s) | 1870 |
| RsaI | GTAC | 5 cut(s) | 330, 670, 696, 2598, 2787 |
| RsaNI | GTAC | 5 cut(s) | 329, 669, 695, 2597, 2786 |
| RseI | CAYNNNNRTG | 2 cut(s) | 846, 2425 |
| SacI | GAGCTC | 1 cut(s) | 2578 |
| SaqAI | TTAA | 7 cut(s) | 114, 1055, 1397, 1625, 2477, 2636, 3261 |
| SatI | GCNGC | 3 cut(s) | 1119, 1871, 2896 |
| Sau96I | GGNCC | 3 cut(s) | 68, 647, 950 |
| SbfI | CCTGCAGG | 1 cut(s) | 655 |
| SchI | GAGTC | 3 cut(s) | 605, 916, 2237 |
| ScrFI | CCNGG | 4 cut(s) | 37, 954, 2586, 2846 |
| SdaI | CCTGCAGG | 1 cut(s) | 655 |
| SduI | GDGCHC | 4 cut(s) | 394, 1716, 2578, 2886 |
| SfaNI | GCATC | 4 cut(s) | 913, 1756, 2105, 2349 |
| SfcI | CTRYAG | 3 cut(s) | 651, 2682, 2979 |
| Sfr274I | CTCGAG | 1 cut(s) | 1844 |
| SinI | GGWCC | 3 cut(s) | 68, 647, 950 |
| SlaI | CTCGAG | 1 cut(s) | 1844 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 846, 2425 |
| SmlI | CTYRAG | 2 cut(s) | 1844, 2258 |
| SmoI | CTYRAG | 2 cut(s) | 1844, 2258 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 655 |
| SsiI | CCGC | 6 cut(s) | 79, 784, 1074, 1183, 2199, 3075 |
| SspI | AATATT | 1 cut(s) | 1404 |
| SspMI | CTAG | 7 cut(s) | 546, 821, 911, 1485, 1902, 2415, 2868 |
| SstI | GAGCTC | 1 cut(s) | 2578 |
| StyD4I | CCNGG | 4 cut(s) | 35, 952, 2584, 2844 |
| StyI | CCWWGG | 2 cut(s) | 64, 1511 |
| TaiI | ACGT | 7 cut(s) | 31, 78, 1029, 1608, 2056, 2365, 2399 |
| TatI | WGTACW | 3 cut(s) | 328, 694, 2785 |
| Tru1I | TTAA | 7 cut(s) | 114, 1055, 1397, 1625, 2477, 2636, 3261 |
| Tru9I | TTAA | 7 cut(s) | 114, 1055, 1397, 1625, 2477, 2636, 3261 |
| TscAI | CASTG | 8 cut(s) | 982, 1018, 2254, 2320, 2460, 2610, 2776, 3145 |
| TseFI | GTSAC | 3 cut(s) | 970, 1351, 2202 |
| TseI | GCWGC | 3 cut(s) | 1118, 1870, 2895 |
| Tsp45I | GTSAC | 3 cut(s) | 970, 1351, 2202 |
| TspGWI | ACGGA | 5 cut(s) | 200, 339, 1677, 2807, 2960 |
| TspRI | CASTG | 8 cut(s) | 982, 1018, 2254, 2320, 2460, 2610, 2776, 3145 |
| VneI | GTGCAC | 1 cut(s) | 1712 |
| VpaK11BI | GGWCC | 3 cut(s) | 68, 647, 950 |
| XapI | RAATTY | 5 cut(s) | 2192, 2629, 2888, 3011, 3263 |
| XbaI | TCTAGA | 1 cut(s) | 910 |
| XceI | RCATGY | 4 cut(s) | 390, 1166, 1343, 1831 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 253 |
| XhoI | CTCGAG | 1 cut(s) | 1844 |
| XmiI | GTMKAC | 1 cut(s) | 2056 |
| XspI | CTAG | 7 cut(s) | 546, 821, 911, 1485, 1902, 2415, 2868 |
| ZraI | GACGTC | 2 cut(s) | 76, 2054 |
| Zsp2I | ATGCAT | 1 cut(s) | 1771 |