Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004063

Physical Location & Seq

Genomic Coordinates Reverse (-)

25287356 .. 25296988

Gene Structure 9633 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G67500.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5673 bp

ATGGCTGATTCTCAATCCGGTTCCAATGTTTTCAGTTTACGGATAGTTTCAATCGATTATTACATGGCTTCTCCAATCCCTGGTTATAATATTTGCTACAGTAGCTTCCAAGGTAGTGAGGTAAATGAAGTCCCTGTTATAAGGATATACGGCTCTACACCTGCTGGTCAGAAGACTTGCTTGCACATTCATCGTGCTTTACCATATCTCTATATTCCGTGCTCAGAAATTCCACTTGAGCATCATAAAGGAGTGGATGGAAGTACACTTGCTTTATCCCTTGAGTTAGAGAAGGCTCTAAAGCTTAAGGGAAATGCTGCTTCAAAAAGGCAACATATCCATGATTGTGAGATTGTAAGAGCAAAGAAGTTTTATGGGTACCACTCAACAGAGGAGGCTTTTGTGAAGATTTATCTTAGCTACCATCCACCCGATGTGGCTCGTGCTGCCAGTCTTCTTCTGGCAGGTGCTGTTCTTGGTAAAAGTTTGCAGCCTTACGAGTCTCATATTCCCTTTATTCTCCAGTTTCTGGTTGATTATAATTTGTATGGAATGGGTCATGTGCATATATCAAAGATGAAGTTCCGTAGCCCAGTGCCTCACCATTTCCGGCCAAGGAGATTTGATTTGGATGATTGTCCGGGACAAAGGATTGACGAAGTGGCTATTACAAAGGCAAATTCAAGTGCTGCTGCAAGCGTCAGTTTTCCTGTTTGGAGCTTGTCAACAATCCCAGGTCAGTGGATGTGGAATCTCTCTGAAGAATCTGATACACCGTTGAGCCAGAGCCAGCATAGGCACCAACACCATTACAGACGTCAGAGTCTCTGTGAACTTGAGGGAGATGCTACTAGTAGTGATATTCTCAATCAACAGTTTAAAATGTACAACTCCCTTTCACAAGCCCAGTCTGATACTAACATGGTTCAGTCGCTTGTGGCAATTTGGGAGGAGGAGTATGAAAGGACTGGTGTGCATGATGCACCTATACCTCCTGATCCTGGTAAACCCTCTGCAGCTGATGTGTTGCAGACTATGTCAGATTATGTTGGGTTTGGGAATATGCTTAAAGAAATGCTAAACAAAGTTGAATTGTCTCCGCCTGGTATGAAGCCTACTGCAGTATCTTCAGCTGGTCCAGATATGCATGCCAAACCTGAAATTACTGATCTACAGGCTTTGAATCATATGGTTGGTACATGCAGTGAGTTTCCTGCATCAGAACAGCTTTCTCCACTTGGCGAGAAGAGTGAAGAAGCATCAATGGAAAATGATGAATATATGAAAACACCCACGGACAGAGATACACCTGCTCAAATACAAGATGCTGAAGCCTTGGGTCTCTTTAAGTGGTTTGCCTCATCTCAGGCTGCAGAGGACATAAACTCAGATGATGAGATTCTCCGGGAAACTATCCTTAGTCCTCTTTTGCCTTTAGCGTCTATTAACAAGGTTCTTGAAATGGCTAGTACAGATTATGTGAGCCAATCCCAAAAGGAATGTCAAGACATTCTTGATTCTCAGGAAAATCTTCCAGACTTTGGGAGTTCGACTAAGAGAGCTTTACCTAGTAATCCTGATAGCCAGAATCTTAGAACTTCATCCGACAAACAATCTCTTGAAATAGAAGTCGCTAGTGATGTTCCAGATAGCTCCACTTCAAATGGAGCAAGCGAAAATTCATTCCGGAGATACAGAAAGAGTGATTTACATACGAGTGAAGTAATGGAGTATAAGAACAGGAGCTTCTCTAAGAGCAACAAGCCTAGCAACTCAGTATGGGGACCTTTACCTTTTACACTGACCAAAAATCTTCAGAAGGACTTTGACAGTACAAATGCTAGTGATAAACTTGGTTTAACAAAGATTAGTTCTTACCCCATGAATGAGATGACAGACAATTATATTGTTCCAGTCAAAGAACATCAAGCAGATGTTTGTAATACAATTGACAGAAACGTTTTGGCTGGATGTTCTCTGCGGGACTTGATGAGAAAAAAACGGTTATGCCATGGAGAATCGCCTGTTTCACAGCATATGAAGTCTAGGAAGGTTAGAGATTCCCGACACGGGGAAAAAAATGAGTGCACCTTGAGATGTGAGGCCAAAAAACAAGGTCCTGCTCTTTCTGCAGAATTTAGCGAATTTGTTTGTGGCGATACTCCAAATTTATCTCCTATAGATTCTGGAAATTGCGAGTGTAATATATCCACTGAGTCATCTGAACTTCATTCTGTTGATAGATGTTCAGCTAAAGAGACAGCAAGTCAAAACAGTGATGAAGTTTTAAGGAATTTGTCATCTACCACTGTTCCATTTGGTAAGGATCCACAAACTGTGGAATCAGGAACACTAGTGTCTAGCAATATACATGTTGGGATTGAAATAGATAGTGTCCAAAAATCGGGGAGGGAGCAAGAGTCAACTGCCAATGAAACTGATGAGACGGGAAGATTAATATGCCTAACCTTAAGCAAGAAGCCTCCTTCTCTCGATTGCCTAAGTGCTGGACTGCAGGATTCTGCACATTCTCATGAAATTCATGCCAGGGAAAAACAGCATGATGAATATGAGGGAAATTCCAACGACATCCCGTTTTTTCCCTTGGAGGACAACAAGGAGGAAAAGAAACACTTTTTCCAAGGAACTTCCCTTGGTATTCCCTTGCATCATCTCAATGACGGCTCCAATCTTTACCTACTGACCCCTGCCTTTTCACCCCCTTCTGTGGATTCTGTTTTACAATGGATATCGAATGACAAAGGAGACTCTAATATTGATTCAGAAAAACAACCATTACGAGATAATCATAATGATCGTGGAGCAAGTTTCACTGATCTTGCTTCTGCATCTAATGTGGTGTCTGTGTCTGAGCACGTGGAGCAGCATAATAACCTTTTTGTGAATTCAGAATCAAATGCTTATACAGAGTCGGAGATAGATCTGAAACCCAAAGGAACGTTTCTTAATCTTAACTTGCAGGCCAGTGTTTCCCAAGAGCTGTCTCAGATTTCAGGCCCTGATGGGAAATCTGGGCCCACTCCCTTAAGTCAAATGGGATTCCGAGATCCTGCGAGCATGGGTGCGGGGCAACAGCTTACAATTCTGAGTATAGAGGTTCATGCAGAGTCTAGAGGGGACCTGCGACCTGATCCACGATTTGATTCTGTCAATGTTATAGCTCTCGTCGTGCAGAATGACGATAGTTTTGTAGCTGAAGTATTTGTGCTTTTATTTAGTCCAGATAGCATTGATCAGAGAAATGTTGATGGCCTATCTGGATGCAAGTTGTCTGTATTCCTTGAAGAGAGGCAACTATTCAGATATTTTATTGAGACTTTATGTAAATGGGATCCAGATGTTCTTCTGGGCTGGGATATACAGGGCGGATCCATTGGTTTTCTAGCTGAAAGAGCTGCACAGCTTGGTATAAGATTTCTCAATAATATATCTAGGACGCCATCTCCGACCACAACAAACAATTCAGATAATAAGAGAAAACTTGGTAATAATCTGCTGCCAGATCCGTTGGTAGCTAATCCTGCTCAAGTAGAAGAAGTGGTAATTGAGGACGAGTGGGGCCGCACACATGCTAGTGGTGTTCATGTTGGAGGTAGAATTGTTCTCAATGCATGGCGTTTGATTCGCGGGGAAGTTAAACTCAACATGTACACGATTGAAGCTGTGTCAGAGGCTGTTTTGAGGCAGAAGGTTCCATCAATCCCCTATAAGGTATTGACAGAATGGTTTTCAAGTGGTCCTGCGGGTGCAAGATATAGATGCATAGAATATGTGATTCGGCGAGCAAATTTGAACCTTGAGATAATGAGCCAACTTGACATGATAAATCGTACGTCAGAACTTGCTCGTGTTTTTGGTATAGACTTTTTCTCAGTTCTCTCCCGAGGTTCACAGTACAGAGTGGAATCCATGCTTCTGAGATTAGCACATACACAAAATTATCTTGCTATTTCTCCAGGAAACCAACAGGTTGCCTCTCAGCCAGCTATGGAATGTGTACCTCTTGTGATGGAACCAGAATCTGCCTTTTACGATGATCCTGTTATTGTGTTGGATTTTCAATCTCTTTACCCTTCAATGATTATAGCATATAATCTGTGCTTTTCTACATGTCTCGGAAAACTTGCACATTTGAAGATGAACACCCTTGGGGTCAGCTCATACTCTCTAGACCTCGATGTTCTTCAGGATTTAAATCAGATCCTACAGACCCCAAACAGTGTGATGTACGTGCCACCAGAGGTGCGTAGAGGAATTTTACCTAGGCTGCTAGAGGAGATTCTGTCTACAAGAATAATGGTGAAAAAAGCAATGAAAAAGTTGACTCCTTCAGAAGCAGTTCTTCACCGGATATTTAATGCGAGGCAGCTTGCTTTAAAGCTGATAGCAAATGTGACTTATGGTTATACTGCTGCTGGCTTCAGTGGTCGAATGCCTTGTGCAGAGCTGGCAGATAGTATTGTCCAGTGTGGTCGTAGCACACTTGAGAAGGCTATTTCATTCGTCAATGCCAATGATAATTGGAACGCTAGAGTTGTATATGGTGACACTGATAGTATGTTTGTCCTCCTAAAAGGACGAACTGTAAAAGAAGCTTTTGTAGTCGGACAAGAGATTGCATCTGCAATAACTGAAATGAACCCACACCCAGTCACTTTAAAGATGGAGAAAGTCTATCACCCTTGTTTCCTTCTTACGAAGAAGCGTTATGTTGGGTACAGTTATGAAAGTCCCAATCAGAGAGAGCCTATATTTGATGCAAAAGGTATTGAAACTGTTCGAAGAGACACTTGTGAAGCTGTTGCGAAAACTATGGAGCAATCGTTGAGACTCTTTTTTGAACAGAAGAACATCTCTAAGGTTAAGTCGTACTTGTATAGACAGTGGAAGCGGATACTATCAGGGAGAGTGTCTCTTCAAGATTTTATCTTTGCAAAAGAAGTTCGGTTGGGTACTTACAGCACAAGAGACTCTTCACTCCTTCCTCCAGCAGCTATTGTGGCAACCAAATCAATGAAAGCAGACCCTCGGACAGAGCCACGCTATGCTGAACGAGTGCCTTATGTTGTGATTCATGGGGAGCCAGGAGCTCGACTTGTTGATATGGTTGTTGATCCACTGGTTCTTTTGGACGTCGATACACCCTACCGACTGAATGACTTATACTACATCAACAAACAAATTATACCAGCTTTGCAAAGGGTATTTGGACTCGTGGGTGCAGACTTAAACCAGTGGTTTTTGGAGATGCCCCGTCTCACCAGAAGCTCCCTTGGTCAACGTCCCTTAAACTCTAAAAACTCACACAAAACAAGGATTGATTATTTTTATCTATCGAAACATTGCATCTTGTGTGGGGAAGTTGTTCAAGAATCTGCTCAACTATGCAACCGGTGCCTTCAAAATAAAAGTGCTGCTGCTGCAACCATTGTTTGGAAGACTTCAAAGTTGGAGAGAGAGATGCAACACCTAGCCACGATATGCAGACACTGTGGTGGGGGAGACTGGGTGGTGCAAAGCGGAGTGAAATGCAATTCCCTTGCGTGCTCAGTCTTTTACGAGAGACGGAAAGTTCAGAAAGAGCTTCGTGGCCTCTCCTCCATTGCTACTGAGAGTGAGCTTTACCCTAAATGCATGGCTGAGTGGTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000731 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006301 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009987 GO:0010225 GO:0016035 GO:0018130 GO:0019438 GO:0019985 GO:0032991 GO:0033554 GO:0034641 GO:0034644 GO:0034645 GO:0034654 GO:0042276 GO:0042575 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044446 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0061695 GO:0071214 GO:0071478 GO:0071482 GO:0071494 GO:0071704 GO:0071897 GO:0090304 GO:0104004 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko01100 ko01524 ko03460 map01100 map01524 map03460

Pfam Domains

Protein Families

DNA_pol_B DNA_pol_B_exo1 RVT_2 zf-C4pol zf-RanBP

Protein Analysis

1890

Amino Acids

210.85

Weight (kDa)

5.83

Isoelectric Point (pI)

49.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
REV3_N	PF24065	11 - 64	3.5e-18	DNA polymerase zeta catalytic subunit, N-terminal
POL3_N	PF24055	66 - 145	3.7e-20	DNA polymerase delta catalytic subunit-like, N-terminal domain
DNA_pol_B_exo1	PF03104	1056 - 1190	6.2e-09	DNA polymerase family B, exonuclease domain
DNA_pol_B	PF00136	1321 - 1768	8.8e-101	DNA polymerase family B
zf-C4pol	PF14260	1814 - 1887	2.5e-14	C4-type zinc-finger of DNA polymerase delta

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0004063)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67500 AT1G67500 AT1G67500 AT1G67500 AT1G67500 AT1G67500 AT1G67500
fragaria_vesca	FvH4_6g06120 FvH4_6g06120 FvH4_6g06120 FvH4_6g06120 FvH4_6g06120
malus_domestica	MD05G1053400.v1.1 MD05G1053600.v1.1 MD05G1053700.v1.1 MD12G1217900.v1.1
prunus_persica	Prupe.6G324000_v2.0.a1 Prupe.6G324000_v2.0.a1 Prupe.6G324000_v2.0.a1
pyrus_communis	pycom05g04420 pycom12g20340
rosa_chinensis	RchiOBHm_Chr3g0455131
rosa_laevigata	RLG00000025385
rosa_multiflora	Rmu_co8200746.1_g000001 Rmu_sc0041669.1_g000001
rosa_roxburghii	Rroxscaffold_6G00424540
rosa_rugosa	Rorug01G0381700 Rorug03G0004000
rosa_samantha	Rh3AG064900 Rh3BG066900 Rh3CG065300 Rh3DG066800
rosa_wichuraiana	Rw3G005080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	87, 140, 540
AarI	CACCTGC	3 cut(s)	169, 455, 1318
AasI	GACNNNNNNGTC	1 cut(s)	822
AatII	GACGTC	2 cut(s)	820, 5157
Acc36I	ACCTGC	4 cut(s)	169, 455, 1318, 3150
Acc65I	GGTACC	1 cut(s)	378
AccB1I	GGYRCC	3 cut(s)	378, 798, 5415
AccB7I	CCANNNNNTGG	4 cut(s)	80, 529, 1541, 5454
AccI	GTMKAC	1 cut(s)	4307
AccII	CGCG	1 cut(s)	3648
AccIII	TCCGGA	1 cut(s)	1686
AciI	CCGC	9 cut(s)	1100, 1981, 3086, 3387, 3583, 3648, 3764, 4912, 5541
AclI	AACGTT	2 cut(s)	1959, 2960
AcoI	YGGCCR	1 cut(s)	611
AcuI	CTGAAG	8 cut(s)	780, 1113, 1350, 1799, 3237, 4190, 4335, 4426
AcvI	CACGTG	1 cut(s)	2878
AcyI	GRCGYC	3 cut(s)	817, 3458, 5154
AflII	CTTAAG	3 cut(s)	305, 2470, 3046
AflIII	ACRYGT	3 cut(s)	2371, 3666, 4130
AgeI	ACCGGT	1 cut(s)	5412
AhdI	GACNNNNNGTC	1 cut(s)	2265
AhlI	ACTAGT	2 cut(s)	851, 2353
AjnI	CCWGG	7 cut(s)	79, 733, 1000, 1102, 2546, 3976, 5104
AleI	CACNNNNGTG	1 cut(s)	5514
Alw21I	GWGCWC	5 cut(s)	224, 2090, 2877, 5113, 5570
Alw44I	GTGCAC	1 cut(s)	2086
AlwNI	CAGNNNCTG	6 cut(s)	470, 529, 3020, 3695, 4043, 5511
Ama87I	CYCGRG	1 cut(s)	3903
Aor13HI	TCCGGA	1 cut(s)	1686
AoxI	GGCC	8 cut(s)	611, 2103, 2982, 3016, 3035, 3271, 3580, 5611
ApaI	GGGCCC	1 cut(s)	3039
ApaLI	GTGCAC	1 cut(s)	2086
ArsI	GACNNNNNNTTYG	4 cut(s)	1486, 1518, 3191, 3223
AseI	ATTAAT	1 cut(s)	2456
AsiGI	ACCGGT	1 cut(s)	5412
Asp700I	GAANNNNTTC	4 cut(s)	1530, 4359, 4797, 5385
Asp718I	GGTACC	1 cut(s)	378
AspA2I	CCTAGG	1 cut(s)	4283
AspS9I	GGNCC	9 cut(s)	1136, 1784, 2117, 3017, 3035, 3036, 3139, 3580, 3758
AsuC2I	CCSGG	2 cut(s)	642, 1406
AsuHPI	GGTGA	7 cut(s)	593, 2709, 4333, 4358, 4577, 4691, 5272
AsuII	TTCGAA	1 cut(s)	4801
AvaI	CYCGRG	1 cut(s)	3903
AvaII	GGWCC	5 cut(s)	1136, 1784, 2117, 3139, 3758
AvrII	CCTAGG	1 cut(s)	4283
BaeGI	GKGCMC	2 cut(s)	2090, 3039
BaeI	ACNNNNGTAYC	2 cut(s)	1107, 1140
BamHI	GGATCC	3 cut(s)	2326, 3352, 3389
BanI	GGYRCC	3 cut(s)	378, 798, 5415
BanII	GRGCYC	2 cut(s)	3039, 5113
BauI	CACGAG	3 cut(s)	441, 3867, 5234
BbrPI	CACGTG	1 cut(s)	2878
BbsI	GAAGAC	3 cut(s)	179, 446, 5465
Bbv12I	GWGCWC	5 cut(s)	224, 2090, 2877, 5113, 5570
BccI	CCATC	8 cut(s)	251, 432, 3017, 3263, 3469, 3724, 4024, 4678
BceAI	ACGGC	2 cut(s)	166, 2698
BcgI	CGANNNNNNTGC	2 cut(s)	173, 207
BciT130I	CCWGG	7 cut(s)	81, 735, 1002, 1104, 2548, 3978, 5106
BciVI	GTATCC	1 cut(s)	4908
BclI	TGATCA	1 cut(s)	3253
BcnI	CCSGG	2 cut(s)	642, 1406
BcuI	ACTAGT	2 cut(s)	851, 2353
BfmI	CTRYAG	9 cut(s)	97, 1014, 1119, 1172, 1371, 2130, 2178, 2513, 4226
BfrI	CTTAAG	3 cut(s)	305, 2470, 3046
BfuAI	ACCTGC	4 cut(s)	169, 455, 1318, 3150
BfuI	GTATCC	1 cut(s)	4908
BglII	AGATCT	1 cut(s)	2941
BlnI	CCTAGG	1 cut(s)	4283
Bme1390I	CCNGG	9 cut(s)	81, 642, 735, 1002, 1104, 1406, 2548, 3978, 5106
Bme18I	GGWCC	5 cut(s)	1136, 1784, 2117, 3139, 3758
BmeRI	GACNNNNNGTC	1 cut(s)	2265
BmeT110I	CYCGRG	1 cut(s)	3903
BmgT120I	GGNCC	9 cut(s)	1136, 1784, 2117, 3017, 3035, 3036, 3139, 3580, 3758
BmrFI	CCNGG	9 cut(s)	81, 642, 735, 1002, 1104, 1406, 2548, 3978, 5106
BmrI	ACTGGG	4 cut(s)	587, 901, 4664, 5536
BmuI	ACTGGG	4 cut(s)	587, 901, 4664, 5536
BpiI	GAAGAC	3 cut(s)	179, 446, 5465
BplI	GAGNNNNNCTC	2 cut(s)	4918, 4950
BpmI	CTGGAG	3 cut(s)	506, 3960, 4992
Bpu14I	TTCGAA	1 cut(s)	4801
BpuEI	CTTGAG	7 cut(s)	257, 302, 857, 2113, 3531, 3839, 4526
BpuMI	CCSGG	2 cut(s)	642, 1406
Bsa29I	ATCGAT	1 cut(s)	54
BsaAI	YACGTR	2 cut(s)	2878, 4252
BsaBI	GATNNNNATC	1 cut(s)	4215
BsaHI	GRCGYC	3 cut(s)	817, 3458, 5154
BsaI	GGTCTC	1 cut(s)	1346
BsaWI	WCCGGW	4 cut(s)	17, 1686, 4368, 5412
Bse118I	RCCGGY	1 cut(s)	5412
Bse3DI	GCAATG	3 cut(s)	4338, 5362, 5622
Bse8I	GATNNNNATC	1 cut(s)	4215
BseAI	TCCGGA	1 cut(s)	1686
BseBI	CCWGG	7 cut(s)	81, 735, 1002, 1104, 2548, 3978, 5106
BseCI	ATCGAT	1 cut(s)	54
BseGI	GGATG	8 cut(s)	262, 424, 637, 750, 1601, 1976, 2589, 3287
BseJI	GATNNNNATC	1 cut(s)	4215
BseMI	GCAATG	3 cut(s)	4338, 5362, 5622
BseRI	GAGGAG	5 cut(s)	407, 965, 968, 4310, 5608
BseSI	GKGCMC	2 cut(s)	2090, 3039
BseYI	CCCAGC	1 cut(s)	3372
BsgI	GTGCAG	5 cut(s)	2508, 3212, 3402, 4482, 5262
Bsh1236I	CGCG	1 cut(s)	3648
BshFI	GGCC	8 cut(s)	613, 2105, 2984, 3018, 3037, 3273, 3582, 5613
BshNI	GGYRCC	3 cut(s)	378, 798, 5415
BshTI	ACCGGT	1 cut(s)	5412
BshVI	ATCGAT	1 cut(s)	54
BsiHKAI	GWGCWC	5 cut(s)	224, 2090, 2877, 5113, 5570
BsiHKCI	CYCGRG	1 cut(s)	3903
BsiSI	CCGG	7 cut(s)	18, 610, 641, 1405, 1687, 4369, 5413
BsiWI	CGTACG	1 cut(s)	3851
BslFI	GGGAC	7 cut(s)	116, 657, 1797, 1997, 3152, 4737, 5289
BsmBI	CGTCTC	3 cut(s)	2438, 5282, 5578
BsmFI	GGGAC	7 cut(s)	116, 657, 1797, 1997, 3152, 4737, 5289
BsmI	GAATGC	1 cut(s)	4458
BsnI	GGCC	8 cut(s)	613, 2105, 2984, 3018, 3037, 3273, 3582, 5613
Bso31I	GGTCTC	1 cut(s)	1346
BsoBI	CYCGRG	1 cut(s)	3903
Bsp119I	TTCGAA	1 cut(s)	4801
Bsp120I	GGGCCC	1 cut(s)	3035
Bsp1286I	GDGCHC	6 cut(s)	224, 2090, 2877, 3039, 5113, 5570
Bsp13I	TCCGGA	1 cut(s)	1686
Bsp1407I	TGTACA	2 cut(s)	885, 3669
Bsp19I	CCATGG	1 cut(s)	2011
BspACI	CCGC	9 cut(s)	1100, 1981, 3086, 3387, 3583, 3648, 3764, 4912, 5541
BspANI	GGCC	8 cut(s)	613, 2105, 2984, 3018, 3037, 3273, 3582, 5613
BspDI	ATCGAT	1 cut(s)	54
BspEI	TCCGGA	1 cut(s)	1686
BspFNI	CGCG	1 cut(s)	3648
BspHI	TCATGA	1 cut(s)	2533
BspMAI	CTGCAG	5 cut(s)	1018, 1123, 1375, 2134, 2517
BspMI	ACCTGC	4 cut(s)	169, 455, 1318, 3150
BspT104I	TTCGAA	1 cut(s)	4801
BspT107I	GGYRCC	3 cut(s)	378, 798, 5415
BspTI	CTTAAG	3 cut(s)	305, 2470, 3046
BspTNI	GGTCTC	1 cut(s)	1346
BsrDI	GCAATG	3 cut(s)	4338, 5362, 5622
BsrFI	RCCGGY	1 cut(s)	5412
BsrGI	TGTACA	2 cut(s)	885, 3669
BssAI	RCCGGY	1 cut(s)	5412
BssNI	GRCGYC	3 cut(s)	817, 3458, 5154
BssSI	CACGAG	3 cut(s)	441, 3867, 5234
Bst2BI	CACGAG	3 cut(s)	441, 3867, 5234
Bst2UI	CCWGG	7 cut(s)	81, 735, 1002, 1104, 2548, 3978, 5106
Bst6I	CTCTTC	5 cut(s)	1241, 3300, 4798, 4941, 4999
BstACI	GRCGYC	3 cut(s)	817, 3458, 5154
BstAFI	CTTAAG	3 cut(s)	305, 2470, 3046
BstAPI	GCANNNNNTGC	1 cut(s)	5415
BstAUI	TGTACA	2 cut(s)	885, 3669
BstBAI	YACGTR	2 cut(s)	2878, 4252
BstBI	TTCGAA	1 cut(s)	4801
BstDSI	CCRYGG	2 cut(s)	1293, 2011
BstF5I	GGATG	8 cut(s)	262, 424, 637, 750, 1601, 1976, 2589, 3287
BstFNI	CGCG	1 cut(s)	3648
BstNI	CCWGG	7 cut(s)	81, 735, 1002, 1104, 2548, 3978, 5106
BstNSI	RCATGY	6 cut(s)	1151, 1203, 2375, 3593, 3670, 4134
BstSCI	CCNGG	9 cut(s)	79, 640, 733, 1000, 1102, 1404, 2546, 3976, 5104
BstSFI	CTRYAG	9 cut(s)	97, 1014, 1119, 1172, 1371, 2130, 2178, 2513, 4226
BstSLI	GKGCMC	2 cut(s)	2090, 3039
BstUI	CGCG	1 cut(s)	3648
BstV2I	GAAGAC	3 cut(s)	179, 446, 5465
BstX2I	RGATCY	7 cut(s)	2326, 2941, 3067, 3352, 3389, 3523, 4221
BstXI	CCANNNNNNTGG	1 cut(s)	741
BstYI	RGATCY	7 cut(s)	2326, 2941, 3067, 3352, 3389, 3523, 4221
Bsu15I	ATCGAT	1 cut(s)	54
BsuI	GTATCC	1 cut(s)	4908
BsuRI	GGCC	8 cut(s)	613, 2105, 2984, 3018, 3037, 3273, 3582, 5613
BsuTUI	ATCGAT	1 cut(s)	54
BtgI	CCRYGG	2 cut(s)	1293, 2011
BtsCI	GGATG	8 cut(s)	262, 424, 637, 750, 1601, 1976, 2589, 3287
BtsI	GCAGTG	1 cut(s)	1210
BveI	ACCTGC	4 cut(s)	169, 455, 1318, 3150
CaiI	CAGNNNCTG	6 cut(s)	470, 529, 3020, 3695, 4043, 5511
CciI	TCATGA	1 cut(s)	2533
Cfr10I	RCCGGY	1 cut(s)	5412
Cfr13I	GGNCC	9 cut(s)	1136, 1784, 2117, 3017, 3035, 3036, 3139, 3580, 3758
ClaI	ATCGAT	1 cut(s)	54
CseI	GACGC	3 cut(s)	688, 1428, 3466
CspAI	ACCGGT	1 cut(s)	5412
DraI	TTTAAA	4 cut(s)	880, 4215, 4398, 4680
DrdI	GACNNNNNNGTC	1 cut(s)	822
DriI	GACNNNNNGTC	1 cut(s)	2265
DseDI	GACNNNNNNGTC	1 cut(s)	822
EaeI	YGGCCR	1 cut(s)	611
Eam1104I	CTCTTC	5 cut(s)	1241, 3300, 4798, 4941, 4999
Eam1105I	GACNNNNNGTC	1 cut(s)	2265
EarI	CTCTTC	5 cut(s)	1241, 3300, 4798, 4941, 4999
EciI	GGCGGA	2 cut(s)	1089, 3402
Ecl136II	GAGCTC	1 cut(s)	5111
Eco24I	GRGCYC	2 cut(s)	3039, 5113
Eco31I	GGTCTC	1 cut(s)	1346
Eco32I	GATATC	1 cut(s)	2751
Eco47I	GGWCC	5 cut(s)	1136, 1784, 2117, 3139, 3758
Eco53kI	GAGCTC	1 cut(s)	5111
Eco57I	CTGAAG	8 cut(s)	780, 1113, 1350, 1799, 3237, 4190, 4335, 4426
Eco72I	CACGTG	1 cut(s)	2878
Eco88I	CYCGRG	1 cut(s)	3903
EcoICRI	GAGCTC	1 cut(s)	5111
EcoO109I	RGGNCCY	4 cut(s)	1784, 2117, 3017, 3139
EcoRI	GAATTC	1 cut(s)	2905
EcoRII	CCWGG	7 cut(s)	79, 733, 1000, 1102, 2546, 3976, 5104
EcoRV	GATATC	1 cut(s)	2751
EcoT22I	ATGCAT	4 cut(s)	1149, 3634, 3785, 5657
EcoT38I	GRGCYC	2 cut(s)	3039, 5113
Esp3I	CGTCTC	3 cut(s)	2438, 5282, 5578
FaqI	GGGAC	7 cut(s)	116, 657, 1797, 1997, 3152, 4737, 5289
FauI	CCCGC	4 cut(s)	1974, 3079, 3641, 3757
FauNDI	CATATG	2 cut(s)	1188, 2037
FbaI	TGATCA	1 cut(s)	3253
FblI	GTMKAC	1 cut(s)	4307
FokI	GGATG	8 cut(s)	269, 411, 644, 757, 1588, 1983, 2576, 3294
FriOI	GRGCYC	2 cut(s)	3039, 5113
GsaI	CCCAGC	1 cut(s)	3376
GsuI	CTGGAG	3 cut(s)	506, 3960, 4992
HaeIII	GGCC	8 cut(s)	613, 2105, 2984, 3018, 3037, 3273, 3582, 5613
HapII	CCGG	7 cut(s)	18, 610, 641, 1405, 1687, 4369, 5413
HgaI	GACGC	3 cut(s)	688, 1428, 3466
Hin1I	GRCGYC	3 cut(s)	817, 3458, 5154
HincII	GTYRAC	4 cut(s)	726, 2424, 4344, 5300
HindII	GTYRAC	4 cut(s)	726, 2424, 4344, 5300
HindIII	AAGCTT	2 cut(s)	302, 4614
HpaII	CCGG	7 cut(s)	18, 610, 641, 1405, 1687, 4369, 5413
HphI	GGTGA	7 cut(s)	593, 2709, 4333, 4358, 4577, 4691, 5272
Hpy99I	CGWCG	2 cut(s)	3191, 5159
HpyCH4IV	ACGT	8 cut(s)	817, 1959, 2877, 2960, 3854, 4251, 5154, 5302
HpySE526I	ACGT	8 cut(s)	817, 1959, 2877, 2960, 3854, 4251, 5154, 5302
Hsp92I	GRCGYC	3 cut(s)	817, 3458, 5154
Kpn2I	TCCGGA	1 cut(s)	1686
KpnI	GGTACC	1 cut(s)	382
Ksp22I	TGATCA	1 cut(s)	3253
MaeII	ACGT	8 cut(s)	817, 1959, 2877, 2960, 3854, 4251, 5154, 5302
MaeIII	GTNAC	3 cut(s)	4414, 4565, 4672
MfeI	CAATTG	1 cut(s)	1947
MflI	RGATCY	7 cut(s)	2326, 2941, 3067, 3352, 3389, 3523, 4221
MhlI	GDGCHC	6 cut(s)	224, 2090, 2877, 3039, 5113, 5570
MmeI	TCCRAC	8 cut(s)	1629, 2607, 2913, 3491, 3589, 4053, 4606, 5451
Mph1103I	ATGCAT	4 cut(s)	1149, 3634, 3785, 5657
MroI	TCCGGA	1 cut(s)	1686
MroXI	GAANNNNTTC	4 cut(s)	1530, 4359, 4797, 5385
MslI	CAYNNNNRTG	7 cut(s)	339, 345, 1716, 2532, 2676, 3594, 5514
MspA1I	CMGCKG	2 cut(s)	1019, 1133
MspCI	CTTAAG	3 cut(s)	305, 2470, 3046
MspI	CCGG	7 cut(s)	18, 610, 641, 1405, 1687, 4369, 5413
MspR9I	CCNGG	9 cut(s)	81, 642, 735, 1002, 1104, 1406, 2548, 3978, 5106
MunI	CAATTG	1 cut(s)	1947
Mva1269I	GAATGC	1 cut(s)	4458
MvaI	CCWGG	7 cut(s)	81, 735, 1002, 1104, 2548, 3978, 5106
MvnI	CGCG	1 cut(s)	3648
NciI	CCSGG	2 cut(s)	642, 1406
NcoI	CCATGG	1 cut(s)	2011
NdeI	CATATG	2 cut(s)	1188, 2037
NmuCI	GTSAC	3 cut(s)	4414, 4565, 4672
NsiI	ATGCAT	4 cut(s)	1149, 3634, 3785, 5657
NspI	RCATGY	6 cut(s)	1151, 1203, 2375, 3593, 3670, 4134
NspV	TTCGAA	1 cut(s)	4801
OliI	CACNNNNGTG	1 cut(s)	5514
PaeI	GCATGC	1 cut(s)	1151
PagI	TCATGA	1 cut(s)	2533
PaqCI	CACCTGC	3 cut(s)	169, 455, 1318
PciI	ACATGT	3 cut(s)	2371, 3666, 4130
PcsI	WCGNNNNNNNCGW	1 cut(s)	3464
PctI	GAATGC	1 cut(s)	4458
PdmI	GAANNNNTTC	4 cut(s)	1530, 4359, 4797, 5385
Pfl23II	CGTACG	1 cut(s)	3851
PflFI	GACNNNGTC	1 cut(s)	1036
PflMI	CCANNNNNTGG	4 cut(s)	80, 529, 1541, 5454
PfoI	TCCNGGA	3 cut(s)	640, 1404, 3976
PinAI	ACCGGT	1 cut(s)	5412
PmaCI	CACGTG	1 cut(s)	2878
PmlI	CACGTG	1 cut(s)	2878
Ppu21I	YACGTR	2 cut(s)	2878, 4252
PpuMI	RGGWCCY	3 cut(s)	1784, 2117, 3139
PscI	ACATGT	3 cut(s)	2371, 3666, 4130
PshBI	ATTAAT	1 cut(s)	2456
PsiI	TTATAA	3 cut(s)	87, 140, 540
Psp124BI	GAGCTC	1 cut(s)	5113
Psp1406I	AACGTT	2 cut(s)	1959, 2960
Psp5II	RGGWCCY	3 cut(s)	1784, 2117, 3139
Psp6I	CCWGG	7 cut(s)	79, 733, 1000, 1102, 2546, 3976, 5104
PspCI	CACGTG	1 cut(s)	2878
PspFI	CCCAGC	1 cut(s)	3372
PspGI	CCWGG	7 cut(s)	79, 733, 1000, 1102, 2546, 3976, 5104
PspLI	CGTACG	1 cut(s)	3851
PspOMI	GGGCCC	1 cut(s)	3035
PspPI	GGNCC	9 cut(s)	1136, 1784, 2117, 3017, 3035, 3036, 3139, 3580, 3758
PspPPI	RGGWCCY	3 cut(s)	1784, 2117, 3139
PstI	CTGCAG	5 cut(s)	1018, 1123, 1375, 2134, 2517
PstNI	CAGNNNCTG	6 cut(s)	470, 529, 3020, 3695, 4043, 5511
PsuI	RGATCY	7 cut(s)	2326, 2941, 3067, 3352, 3389, 3523, 4221
PsyI	GACNNNGTC	1 cut(s)	1036
PvuII	CAGCTG	2 cut(s)	1019, 1133
RseI	CAYNNNNRTG	7 cut(s)	339, 345, 1716, 2532, 2676, 3594, 5514
SacI	GAGCTC	1 cut(s)	5113
Sau96I	GGNCC	9 cut(s)	1136, 1784, 2117, 3017, 3035, 3036, 3139, 3580, 3758
ScrFI	CCNGG	9 cut(s)	81, 642, 735, 1002, 1104, 1406, 2548, 3978, 5106
SduI	GDGCHC	6 cut(s)	224, 2090, 2877, 3039, 5113, 5570
SfcI	CTRYAG	9 cut(s)	97, 1014, 1119, 1172, 1371, 2130, 2178, 2513, 4226
SfuI	TTCGAA	1 cut(s)	4801
SinI	GGWCC	5 cut(s)	1136, 1784, 2117, 3139, 3758
SmiI	ATTTAAAT	1 cut(s)	4215
SmiMI	CAYNNNNRTG	7 cut(s)	339, 345, 1716, 2532, 2676, 3594, 5514
SpeI	ACTAGT	2 cut(s)	851, 2353
SphI	GCATGC	1 cut(s)	1151
SsiI	CCGC	9 cut(s)	1100, 1981, 3086, 3387, 3583, 3648, 3764, 4912, 5541
SspI	AATATT	2 cut(s)	91, 2776
SstI	GAGCTC	1 cut(s)	5113
StyD4I	CCNGG	9 cut(s)	79, 640, 733, 1000, 1102, 1404, 2546, 3976, 5104
SwaI	ATTTAAAT	1 cut(s)	4215
TaiI	ACGT	8 cut(s)	820, 1962, 2880, 2963, 3857, 4254, 5157, 5305
TatI	WGTACW	6 cut(s)	263, 885, 1469, 1832, 3669, 3915
TauI	GCSGC	1 cut(s)	3585
TseFI	GTSAC	3 cut(s)	4414, 4565, 4672
Tsp45I	GTSAC	3 cut(s)	4414, 4565, 4672
TspGWI	ACGGA	6 cut(s)	55, 207, 575, 1310, 3516, 5602
Tth111I	GACNNNGTC	1 cut(s)	1036
Van91I	CCANNNNNTGG	4 cut(s)	80, 529, 1541, 5454
Vha464I	CTTAAG	3 cut(s)	305, 2470, 3046
VneI	GTGCAC	1 cut(s)	2086
VpaK11BI	GGWCC	5 cut(s)	1136, 1784, 2117, 3139, 3758
VspI	ATTAAT	1 cut(s)	2456
XbaI	TCTAGA	2 cut(s)	3131, 4189
XceI	RCATGY	6 cut(s)	1151, 1203, 2375, 3593, 3670, 4134
XcmI	CCANNNNNNNNNTGG	1 cut(s)	457
XmaJI	CCTAGG	1 cut(s)	4283
XmiI	GTMKAC	1 cut(s)	4307
XmnI	GAANNNNTTC	4 cut(s)	1530, 4359, 4797, 5385
ZraI	GACGTC	2 cut(s)	818, 5155
Zsp2I	ATGCAT	4 cut(s)	1149, 3634, 3785, 5657

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.