Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003985

Physical Location & Seq

Genomic Coordinates Forward (+)

28695760 .. 28698852

Gene Structure 3093 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G76490.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

ATGAAGAAAAAGCAAGCTGGTCCCCAACAGACATGCGAGTTCGTCTCCTATAAAACTTTGTTAATCTCTCCTTCACACTTATCACGCCACCTCACCACCTCTCTCCTCTCTCCTCTCTCTCCCCCCTGGAGAGATTATTCATTCCCTCCAATGGATCTCCGTCGGAGGCCTCCTAAACCACCGGTTACCAACAACAACAACTCCAACGGATCTTTCCGTTCTTATCAGCCTCGCACTTCCGATGACGATCATCGTCGCCGGGCTACAACAATTGCTCCTCCACCGAAAGCATCCGACGCGCTTCCTCTTCCGTTATATCTCACAAACGCCGTTTTCTTCACGCTCTTCTTCTCCGTCGCGTATTACCTCCTCCACCGGTGGCGTGACAAGATCCGTTACAATACGCCTCTTCACGTCGTCACTATCACAGAACTCGGCGCCATTATTGCTCTCATCGCTTCGTTTATCTATCTCCTAGGGTTTTTTGGTATTGACTTTGTTCAGTCATTTATCTCACGTGCCTCTGGTGATGCTTGGGATCTCGCCGATACGATCGATGATGATGACCACCGCCTTGTCACGTGCTCTCCACCGACTCCGATCGTTTCCGTTGCTAAATTACCTAATCCGGAACCTATTGTTACCGAATCGCTTCCTGAGGAAGACGAGGAGATTGTGAAATCGGTTATCGACGGAGTTATTCCATCGTACTCGCTTGAATCTCGTCTCGGTGATTGCAAAAGAGCGGCGTCGATTCGTCGTGAGGCGTTGCAGAGAGTCACCGGGAGATCGATTGAAGGGTTACCGTTGGATGGATTTGATTATGAATCGATTTTGGGGCAATGCTGTGAGATGCCTGTTGGATACATTCAGATTCCTGTTGGGATTGCTGGTCCATTGTTGCTTGATGGTTATGAGTACTCTGTTCCTATGGCTACAACCGAAGGTTGTTTGGTTGCTAGCACTAACAGAGGCTGCAAGGCTATGTTTATCTCTGGTGGCGCCACCAGTACCGTTCTTAAGGACGGTATGACCCGAGCACCTGTTGTTCGGTTCGCTTCGGCGAGACGAGCTTCGGAGCTTAAGTTTTTCTTGGAGAATCCAGAGAACTTTGATACTTTGGCAGTAGTCTTCAACAGGTCGAGTAGATTTGCAAGACTGCAAAGTGTTAAATGCACAATCGCGGGGAAGAATGCTTATGTAAGGTTCTGTTGTAGTACTGGTGATGCTATGGGGATGAATATGGTTTCTAAAGGTGTGCAGAATGTTCTTGAGTATCTTACCGATGATTTCCCTGACATGGATGTGATTGGAATCTCTGGTAACTTCTGTTCGGACAAGAAACCTGCTGCTGTGAACTGGATTGAGGGACGTGGTAAATCAGTTGTTTGCGAGGCTGTAATCAGAGGAGAGATCGTGAACAAGGTCTTGAAAACGAGCGTGGCTGCTTTAGTCGAGCTCAACATGCTCAAGAACCTAGCTGGCTCTGCTGTTGCAGGCTCTCTAGGTGGATTCAACGCTCATGCCAGTAACATAGTGTCTGCTGTATTCATAGCTACTGGCCAAGATCCAGCTCAAAACGTGGAGAGTTCTCAATGCATCACCATGATGGAAGCTATTAATGACGGCAAAGATATCCATATCTCAGTCACTATGCCATCTATCGAGGTGGGGACAGTGGGAGGAGGAACACAGCTTGCATCTCAATCAGCGTGTTTAAACCTGCTCGGAGTTAAAGGAGCAAGCACAGAGTCGCCGGGAATGAACGCAAGGAGGCTAGCGACGATCGTAGCCGGAGCAGTTTTAGCTGGAGAGTTATCTTTAATGTCAGCAATTGCAGCTGGACAGCTTGTGAGAAGTCACATGAAATACAATAGATCCAGCCGAGACATCTCTGGAGCAACGACAACGACAACAACAACAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004420 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006084 GO:0006139 GO:0006163 GO:0006629 GO:0006637 GO:0006644 GO:0006694 GO:0006720 GO:0006725 GO:0006732 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0008654 GO:0009058 GO:0009117 GO:0009150 GO:0009240 GO:0009259 GO:0009987 GO:0012505 GO:0016020 GO:0016125 GO:0016126 GO:0016491 GO:0016614 GO:0016616 GO:0019287 GO:0019637 GO:0019693 GO:0031984 GO:0033865 GO:0033875 GO:0034032 GO:0034641 GO:0035383 GO:0042175 GO:0042282 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046490 GO:0051186 GO:0055086 GO:0055114 GO:0071704 GO:0072521 GO:0090407 GO:0098827 GO:1901135 GO:1901360 GO:1901362 GO:1901564 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 ko04152 ko04976 map00900 map01100 map01110 map01130 map04152 map04976

Pfam Domains

Protein Families

HMG-CoA_red

Protein Analysis

642

Amino Acids

69.28

Weight (kDa)

7.49

Isoelectric Point (pI)

45.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMG-CoA_red	PF00368	250 - 626	2e-144	Hydroxymethylglutaryl-coenzyme A reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003985)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76490
fragaria_vesca	FvH4_1g09980 FvH4_5g26180
malus_domestica	MD02G1108500.v1.1 MD02G1108700.v1.1 MD04G1238500.v1.1 MD08G1025200.v1.1 MD15G1227900.v1.1
prunus_persica	Prupe.7G187000_v2.0.a1 Prupe.7G187500_v2.0.a1
pyrus_communis	pycom02g08710 pycom02g08720 pycom15g20270
rosa_chinensis	RchiOBHm_Chr2g0096771 RchiOBHm_Chr7g0216871
rosa_laevigata	RLG00000002531 RLG00000016668
rosa_multiflora	Rmu_sc0000854.1_g000004 Rmu_sc0004291.1_g000010 Rmu_sc0030893.1_g000001
rosa_roxburghii	Rroxscaffold_2G00145340 Rroxscaffold_3G00242800
rosa_rugosa	Rorug02G0060600 Rorug07G0164000.1
rosa_samantha	Rh2AG107800 Rh2BG110200 Rh2CG112100 Rh2DG111500 Rh7AG303400 Rh7BG295400 Rh7CG322100
rosa_wichuraiana	Rw2G008350 Rw7G025820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1354, 1731
AccB1I	GGYRCC	2 cut(s)	437, 1001
AccBSI	CCGCTC	1 cut(s)	746
AccII	CGCG	3 cut(s)	299, 359, 1184
AccIII	TCCGGA	1 cut(s)	628
AciI	CCGC	3 cut(s)	571, 746, 1184
AclWI	GGATC	6 cut(s)	162, 217, 385, 546, 1562, 1872
AcoI	YGGCCR	1 cut(s)	1561
AcvI	CACGTG	2 cut(s)	518, 582
AcyI	GRCGYC	3 cut(s)	438, 749, 1002
AfaI	GTAC	4 cut(s)	710, 920, 1012, 1219
AfiI	CCNNNNNNNGG	3 cut(s)	151, 812, 1300
AflII	CTTAAG	2 cut(s)	1019, 1082
AgeI	ACCGGT	2 cut(s)	181, 375
AgsI	TTSAA	5 cut(s)	719, 797, 1135, 1432, 1516
AjiI	CACGTC	2 cut(s)	415, 1373
AjnI	CCWGG	1 cut(s)	125
AjuI	GAANNNNNNNTTGG	2 cut(s)	197, 229
Alw21I	GWGCWC	3 cut(s)	587, 1042, 1461
Alw26I	GTCTC	4 cut(s)	49, 731, 1060, 1881
AlwI	GGATC	6 cut(s)	162, 217, 385, 546, 1562, 1872
AlwNI	CAGNNNCTG	1 cut(s)	975
Ama87I	CYCGRG	1 cut(s)	1035
Aor13HI	TCCGGA	1 cut(s)	628
AoxI	GGCC	2 cut(s)	167, 1561
ApeKI	GCWGC	4 cut(s)	975, 1349, 1445, 1838
AseI	ATTAAT	1 cut(s)	1620
AsiGI	ACCGGT	2 cut(s)	181, 375
Asp700I	GAANNNNTTC	1 cut(s)	651
AspA2I	CCTAGG	1 cut(s)	475
AspLEI	GCGC	3 cut(s)	301, 440, 1004
AspS9I	GGNCC	2 cut(s)	20, 893
AsuC2I	CCSGG	3 cut(s)	260, 784, 1758
AsuHPI	GGTGA	6 cut(s)	85, 539, 743, 772, 1235, 1594
AsuNHI	GCTAGC	2 cut(s)	959, 1777
AvaI	CYCGRG	1 cut(s)	1035
AvaII	GGWCC	2 cut(s)	20, 893
AvrII	CCTAGG	1 cut(s)	475
AxyI	CCTNAGG	1 cut(s)	657
BalI	TGGCCA	1 cut(s)	1563
BanI	GGYRCC	2 cut(s)	437, 1001
BanII	GRGCYC	1 cut(s)	1461
BbrPI	CACGTG	2 cut(s)	518, 582
BbsI	GAAGAC	2 cut(s)	669, 1123
Bbv12I	GWGCWC	3 cut(s)	587, 1042, 1461
BbvI	GCAGC	4 cut(s)	962, 1336, 1432, 1850
BccI	CCATC	5 cut(s)	712, 806, 902, 1603, 1666
BceAI	ACGGC	2 cut(s)	314, 1642
BciT130I	CCWGG	1 cut(s)	127
BciVI	GTATCC	1 cut(s)	857
BcnI	CCSGG	3 cut(s)	260, 784, 1758
BcoDI	GTCTC	4 cut(s)	49, 731, 1060, 1881
BfaI	CTAG	5 cut(s)	476, 960, 1478, 1505, 1778
BfoI	RGCGCY	2 cut(s)	441, 1005
BfrI	CTTAAG	2 cut(s)	1019, 1082
BfuAI	ACCTGC	2 cut(s)	1354, 1731
BfuI	GTATCC	1 cut(s)	857
BisI	GCNGC	5 cut(s)	747, 976, 1350, 1446, 1839
BlnI	CCTAGG	1 cut(s)	475
BlsI	GCNGC	5 cut(s)	748, 977, 1351, 1447, 1840
BmcAI	AGTACT	2 cut(s)	920, 1219
Bme1390I	CCNGG	4 cut(s)	127, 260, 784, 1758
Bme18I	GGWCC	2 cut(s)	20, 893
BmeT110I	CYCGRG	1 cut(s)	1035
BmgBI	CACGTC	2 cut(s)	415, 1373
BmgT120I	GGNCC	2 cut(s)	20, 893
BmiI	GGNNCC	4 cut(s)	22, 439, 633, 1003
BmrFI	CCNGG	4 cut(s)	127, 260, 784, 1758
BmsI	GCATC	6 cut(s)	299, 520, 843, 1216, 1608, 1709
BmtI	GCTAGC	2 cut(s)	963, 1781
BpiI	GAAGAC	2 cut(s)	669, 1123
BplI	GAGNNNNNCTC	2 cut(s)	29, 61
BpmI	CTGGAG	3 cut(s)	148, 1830, 1917
BpuEI	CTTGAG	2 cut(s)	1292, 1454
BpuMI	CCSGG	3 cut(s)	260, 784, 1758
Bsa29I	ATCGAT	3 cut(s)	555, 791, 830
BsaAI	YACGTR	2 cut(s)	518, 582
BsaBI	GATNNNNATC	2 cut(s)	246, 1313
BsaHI	GRCGYC	3 cut(s)	438, 749, 1002
BsaJI	CCNNGG	2 cut(s)	125, 475
BsaWI	WCCGGW	3 cut(s)	181, 375, 628
Bsc4I	CCNNNNNNNGG	3 cut(s)	151, 812, 1300
Bse118I	RCCGGY	2 cut(s)	181, 375
Bse1I	ACTGG	5 cut(s)	1008, 1225, 1364, 1527, 1564
Bse21I	CCTNAGG	1 cut(s)	657
Bse3DI	GCAATG	1 cut(s)	848
Bse8I	GATNNNNATC	2 cut(s)	246, 1313
BseAI	TCCGGA	1 cut(s)	628
BseBI	CCWGG	1 cut(s)	127
BseCI	ATCGAT	3 cut(s)	555, 791, 830
BseDI	CCNNGG	2 cut(s)	125, 475
BseGI	GGATG	4 cut(s)	290, 817, 1242, 1309
BseJI	GATNNNNATC	2 cut(s)	246, 1313
BseLI	CCNNNNNNNGG	3 cut(s)	151, 812, 1300
BseMI	GCAATG	1 cut(s)	848
BseMII	CTCAG	2 cut(s)	648, 1659
BseNI	ACTGG	5 cut(s)	1008, 1225, 1364, 1527, 1564
BseRI	GAGGAG	7 cut(s)	95, 102, 267, 359, 683, 1422, 1698
BseXI	GCAGC	4 cut(s)	962, 1336, 1432, 1850
BsgI	GTGCAG	1 cut(s)	1280
Bsh1236I	CGCG	3 cut(s)	299, 359, 1184
Bsh1285I	CGRYCG	3 cut(s)	555, 603, 1788
BshFI	GGCC	2 cut(s)	169, 1563
BshNI	GGYRCC	2 cut(s)	437, 1001
BshTI	ACCGGT	2 cut(s)	181, 375
BshVI	ATCGAT	3 cut(s)	555, 791, 830
BsiEI	CGRYCG	3 cut(s)	555, 603, 1788
BsiHKAI	GWGCWC	3 cut(s)	587, 1042, 1461
BsiHKCI	CYCGRG	1 cut(s)	1035
BsiSI	CCGG	7 cut(s)	182, 259, 376, 629, 783, 1757, 1794
BslFI	GGGAC	3 cut(s)	6, 1383, 1687
BslI	CCNNNNNNNGG	3 cut(s)	151, 812, 1300
BsmAI	GTCTC	4 cut(s)	49, 731, 1060, 1881
BsmBI	CGTCTC	3 cut(s)	49, 731, 1060
BsmFI	GGGAC	3 cut(s)	6, 1383, 1687
BsmI	GAATGC	1 cut(s)	1198
BsnI	GGCC	2 cut(s)	169, 1563
BsoBI	CYCGRG	1 cut(s)	1035
Bsp1286I	GDGCHC	3 cut(s)	587, 1042, 1461
Bsp13I	TCCGGA	1 cut(s)	628
BspACI	CCGC	3 cut(s)	571, 746, 1184
BspANI	GGCC	2 cut(s)	169, 1563
BspCNI	CTCAG	2 cut(s)	649, 1658
BspDI	ATCGAT	3 cut(s)	555, 791, 830
BspEI	TCCGGA	1 cut(s)	628
BspFNI	CGCG	3 cut(s)	299, 359, 1184
BspLI	GGNNCC	4 cut(s)	22, 439, 633, 1003
BspMI	ACCTGC	2 cut(s)	1354, 1731
BspOI	GCTAGC	2 cut(s)	963, 1781
BspPI	GGATC	6 cut(s)	162, 217, 385, 546, 1562, 1872
BspQI	GCTCTTC	1 cut(s)	350
BspT107I	GGYRCC	2 cut(s)	437, 1001
BspTI	CTTAAG	2 cut(s)	1019, 1082
BsrBI	CCGCTC	1 cut(s)	746
BsrDI	GCAATG	1 cut(s)	848
BsrFI	RCCGGY	2 cut(s)	181, 375
BsrI	ACTGG	5 cut(s)	1008, 1225, 1364, 1527, 1564
BssAI	RCCGGY	2 cut(s)	181, 375
BssECI	CCNNGG	2 cut(s)	125, 475
BssNI	GRCGYC	3 cut(s)	438, 749, 1002
BssT1I	CCWWGG	1 cut(s)	475
Bst2UI	CCWGG	1 cut(s)	127
Bst4CI	ACNGT	4 cut(s)	807, 1015, 1028, 1678
Bst6I	CTCTTC	3 cut(s)	312, 350, 414
BstACI	GRCGYC	3 cut(s)	438, 749, 1002
BstAFI	CTTAAG	2 cut(s)	1019, 1082
BstBAI	YACGTR	2 cut(s)	518, 582
BstC8I	GCNNGC	7 cut(s)	15, 961, 1483, 1498, 1698, 1744, 1779
BstDEI	CTNAG	2 cut(s)	657, 1645
BstEII	GGTNACC	2 cut(s)	184, 801
BstF5I	GGATG	4 cut(s)	290, 817, 1242, 1309
BstFNI	CGCG	3 cut(s)	299, 359, 1184
BstH2I	RGCGCY	2 cut(s)	441, 1005
BstHHI	GCGC	3 cut(s)	301, 440, 1004
BstMAI	GTCTC	4 cut(s)	49, 731, 1060, 1881
BstMCI	CGRYCG	3 cut(s)	555, 603, 1788
BstMWI	GCNNNNNNNGC	8 cut(s)	296, 446, 455, 1070, 1465, 1487, 1805, 1838
BstNI	CCWGG	1 cut(s)	127
BstNSI	RCATGY	2 cut(s)	36, 1468
BstPI	GGTNACC	2 cut(s)	184, 801
BstSCI	CCNGG	4 cut(s)	125, 258, 782, 1756
BstUI	CGCG	3 cut(s)	299, 359, 1184
BstV1I	GCAGC	4 cut(s)	962, 1336, 1432, 1850
BstV2I	GAAGAC	2 cut(s)	669, 1123
BstX2I	RGATCY	6 cut(s)	154, 209, 390, 538, 1567, 1877
BstYI	RGATCY	6 cut(s)	154, 209, 390, 538, 1567, 1877
Bsu15I	ATCGAT	3 cut(s)	555, 791, 830
Bsu36I	CCTNAGG	1 cut(s)	657
BsuI	GTATCC	1 cut(s)	857
BsuRI	GGCC	2 cut(s)	169, 1563
BsuTUI	ATCGAT	3 cut(s)	555, 791, 830
BtgZI	GCGATG	1 cut(s)	439
BtrI	CACGTC	2 cut(s)	415, 1373
BtsCI	GGATG	4 cut(s)	290, 817, 1242, 1309
BtsIMutI	CAGTG	1 cut(s)	1683
BveI	ACCTGC	2 cut(s)	1354, 1731
Cac8I	GCNNGC	7 cut(s)	15, 961, 1483, 1498, 1698, 1744, 1779
CaiI	CAGNNNCTG	1 cut(s)	975
CfoI	GCGC	3 cut(s)	301, 440, 1004
Cfr10I	RCCGGY	2 cut(s)	181, 375
Cfr13I	GGNCC	2 cut(s)	20, 893
ClaI	ATCGAT	3 cut(s)	555, 791, 830
CseI	GACGC	2 cut(s)	305, 738
Csp6I	GTAC	4 cut(s)	709, 919, 1011, 1218
CspAI	ACCGGT	2 cut(s)	181, 375
CviAII	CATG	7 cut(s)	33, 1300, 1465, 1523, 1606, 1864, 1926
CviQI	GTAC	4 cut(s)	709, 919, 1011, 1218
DdeI	CTNAG	2 cut(s)	657, 1645
DinI	GGCGCC	2 cut(s)	439, 1003
DraI	TTTAAA	1 cut(s)	1719
EaeI	YGGCCR	1 cut(s)	1561
Eam1104I	CTCTTC	3 cut(s)	312, 350, 414
EarI	CTCTTC	3 cut(s)	312, 350, 414
Ecl136II	GAGCTC	1 cut(s)	1459
Eco130I	CCWWGG	1 cut(s)	475
Eco147I	AGGCCT	1 cut(s)	169
Eco24I	GRGCYC	1 cut(s)	1461
Eco32I	GATATC	1 cut(s)	1636
Eco47I	GGWCC	2 cut(s)	20, 893
Eco53kI	GAGCTC	1 cut(s)	1459
Eco72I	CACGTG	2 cut(s)	518, 582
Eco81I	CCTNAGG	1 cut(s)	657
Eco88I	CYCGRG	1 cut(s)	1035
Eco91I	GGTNACC	2 cut(s)	184, 801
EcoICRI	GAGCTC	1 cut(s)	1459
EcoO65I	GGTNACC	2 cut(s)	184, 801
EcoRII	CCWGG	1 cut(s)	125
EcoRV	GATATC	1 cut(s)	1636
EcoT14I	CCWWGG	1 cut(s)	475
EcoT22I	ATGCAT	1 cut(s)	1601
EcoT38I	GRGCYC	1 cut(s)	1461
EgeI	GGCGCC	2 cut(s)	439, 1003
EheI	GGCGCC	2 cut(s)	439, 1003
ErhI	CCWWGG	1 cut(s)	475
Esp3I	CGTCTC	3 cut(s)	49, 731, 1060
FaeI	CATG	7 cut(s)	36, 1303, 1468, 1526, 1609, 1867, 1929
FalI	AAGNNNNNCTT	2 cut(s)	1076, 1108
FaqI	GGGAC	3 cut(s)	6, 1383, 1687
FatI	CATG	7 cut(s)	32, 1299, 1464, 1522, 1605, 1863, 1925
FauI	CCCGC	1 cut(s)	1177
Fnu4HI	GCNGC	5 cut(s)	747, 976, 1350, 1446, 1839
FokI	GGATG	4 cut(s)	277, 824, 1249, 1316
FriOI	GRGCYC	1 cut(s)	1461
Fsp4HI	GCNGC	5 cut(s)	747, 976, 1350, 1446, 1839
FspBI	CTAG	5 cut(s)	476, 960, 1478, 1505, 1778
GlaI	GCGC	3 cut(s)	300, 439, 1003
GluI	GCNGC	5 cut(s)	747, 976, 1350, 1446, 1839
GsuI	CTGGAG	3 cut(s)	148, 1830, 1917
HaeII	RGCGCY	2 cut(s)	441, 1005
HaeIII	GGCC	2 cut(s)	169, 1563
HapII	CCGG	7 cut(s)	182, 259, 376, 629, 783, 1757, 1794
HgaI	GACGC	2 cut(s)	305, 738
HhaI	GCGC	3 cut(s)	301, 440, 1004
Hin1I	GRCGYC	3 cut(s)	438, 749, 1002
Hin1II	CATG	7 cut(s)	36, 1303, 1468, 1526, 1609, 1867, 1929
Hin6I	GCGC	3 cut(s)	299, 438, 1002
HinP1I	GCGC	3 cut(s)	299, 438, 1002
HpaII	CCGG	7 cut(s)	182, 259, 376, 629, 783, 1757, 1794
HphI	GGTGA	6 cut(s)	85, 539, 743, 772, 1235, 1594
Hpy166II	GTNNAC	2 cut(s)	1357, 1420
Hpy188I	TCNGA	9 cut(s)	165, 241, 295, 600, 873, 1078, 1336, 1406, 1730
Hpy188III	TCNNGA	9 cut(s)	629, 656, 761, 1103, 1271, 1417, 1429, 1471, 1896
Hpy8I	GTNNAC	2 cut(s)	1357, 1420
Hpy99I	CGWCG	9 cut(s)	165, 258, 299, 359, 419, 695, 754, 762, 1786
HpyAV	CCTTC	3 cut(s)	81, 791, 938
HpyCH4III	ACNGT	4 cut(s)	807, 1015, 1028, 1678
HpyCH4IV	ACGT	5 cut(s)	414, 517, 581, 1372, 1581
HpyF10VI	GCNNNNNNNGC	8 cut(s)	296, 446, 455, 1070, 1465, 1487, 1805, 1838
HpyF3I	CTNAG	2 cut(s)	657, 1645
HpySE526I	ACGT	5 cut(s)	414, 517, 581, 1372, 1581
Hsp92I	GRCGYC	3 cut(s)	438, 749, 1002
Hsp92II	CATG	7 cut(s)	36, 1303, 1468, 1526, 1609, 1867, 1929
HspAI	GCGC	3 cut(s)	299, 438, 1002
KasI	GGCGCC	2 cut(s)	437, 1001
Kpn2I	TCCGGA	1 cut(s)	628
LguI	GCTCTTC	1 cut(s)	350
LmnI	GCTCC	5 cut(s)	280, 1078, 1739, 1796, 1898
Lsp1109I	GCAGC	4 cut(s)	962, 1336, 1432, 1850
LweI	GCATC	6 cut(s)	299, 520, 843, 1216, 1608, 1709
MaeI	CTAG	5 cut(s)	476, 960, 1478, 1505, 1778
MaeII	ACGT	5 cut(s)	414, 517, 581, 1372, 1581
MbiI	CCGCTC	1 cut(s)	746
MboII	GAAGA	9 cut(s)	16, 299, 328, 337, 340, 401, 674, 1123, 1201
MfeI	CAATTG	2 cut(s)	270, 1833
MflI	RGATCY	6 cut(s)	154, 209, 390, 538, 1567, 1877
MhlI	GDGCHC	3 cut(s)	587, 1042, 1461
MlsI	TGGCCA	1 cut(s)	1563
MluCI	AATT	3 cut(s)	270, 617, 1833
MluNI	TGGCCA	1 cut(s)	1563
Mly113I	GGCGCC	2 cut(s)	438, 1002
MlyI	GAGTC	3 cut(s)	589, 786, 1760
MmeI	TCCRAC	5 cut(s)	143, 228, 318, 789, 841
Mox20I	TGGCCA	1 cut(s)	1563
Mph1103I	ATGCAT	1 cut(s)	1601
MroI	TCCGGA	1 cut(s)	628
MroXI	GAANNNNTTC	1 cut(s)	651
MscI	TGGCCA	1 cut(s)	1563
MseI	TTAA	8 cut(s)	62, 1020, 1083, 1170, 1620, 1718, 1734, 1823
MslI	CAYNNNNRTG	3 cut(s)	1304, 1604, 1607
Msp20I	TGGCCA	1 cut(s)	1563
MspA1I	CMGCKG	1 cut(s)	1841
MspCI	CTTAAG	2 cut(s)	1019, 1082
MspI	CCGG	7 cut(s)	182, 259, 376, 629, 783, 1757, 1794
MspR9I	CCNGG	4 cut(s)	127, 260, 784, 1758
MssI	GTTTAAAC	1 cut(s)	1719
MunI	CAATTG	2 cut(s)	270, 1833
Mva1269I	GAATGC	1 cut(s)	1198
MvaI	CCWGG	1 cut(s)	127
MvnI	CGCG	3 cut(s)	299, 359, 1184
MwoI	GCNNNNNNNGC	8 cut(s)	296, 446, 455, 1070, 1465, 1487, 1805, 1838
NarI	GGCGCC	2 cut(s)	438, 1002
NciI	CCSGG	3 cut(s)	260, 784, 1758
NheI	GCTAGC	2 cut(s)	959, 1777
NlaIII	CATG	7 cut(s)	36, 1303, 1468, 1526, 1609, 1867, 1929
NlaIV	GGNNCC	4 cut(s)	22, 439, 633, 1003
NmeAIII	GCCGAG	2 cut(s)	414, 1910
NmuCI	GTSAC	6 cut(s)	383, 418, 577, 778, 1648, 1859
NsiI	ATGCAT	1 cut(s)	1601
NspI	RCATGY	2 cut(s)	36, 1468
PceI	AGGCCT	1 cut(s)	169
PciSI	GCTCTTC	1 cut(s)	350
PctI	GAATGC	1 cut(s)	1198
PdmI	GAANNNNTTC	1 cut(s)	651
PfeI	GAWTC	8 cut(s)	647, 719, 754, 827, 874, 1099, 1314, 1512
PinAI	ACCGGT	2 cut(s)	181, 375
PkrI	GCNGC	5 cut(s)	748, 977, 1351, 1447, 1840
Ple19I	CGATCG	3 cut(s)	555, 603, 1788
PleI	GAGTC	3 cut(s)	589, 785, 1759
PluTI	GGCGCC	2 cut(s)	441, 1005
PmaCI	CACGTG	2 cut(s)	518, 582
PmeI	GTTTAAAC	1 cut(s)	1719
PmlI	CACGTG	2 cut(s)	518, 582
PpsI	GAGTC	3 cut(s)	589, 785, 1759
Ppu21I	YACGTR	2 cut(s)	518, 582
PshBI	ATTAAT	1 cut(s)	1620
Psp124BI	GAGCTC	1 cut(s)	1461
Psp6I	CCWGG	1 cut(s)	125
PspCI	CACGTG	2 cut(s)	518, 582
PspEI	GGTNACC	2 cut(s)	184, 801
PspGI	CCWGG	1 cut(s)	125
PspN4I	GGNNCC	4 cut(s)	22, 439, 633, 1003
PspPI	GGNCC	2 cut(s)	20, 893
PsrI	GAACNNNNNNTAC	2 cut(s)	1315, 1347
PstNI	CAGNNNCTG	1 cut(s)	975
PsuI	RGATCY	6 cut(s)	154, 209, 390, 538, 1567, 1877
PvuI	CGATCG	3 cut(s)	555, 603, 1788
PvuII	CAGCTG	1 cut(s)	1841
RsaI	GTAC	4 cut(s)	710, 920, 1012, 1219
RsaNI	GTAC	4 cut(s)	709, 919, 1011, 1218
RseI	CAYNNNNRTG	3 cut(s)	1304, 1604, 1607
SacI	GAGCTC	1 cut(s)	1461
SapI	GCTCTTC	1 cut(s)	350
SaqAI	TTAA	8 cut(s)	62, 1020, 1083, 1170, 1620, 1718, 1734, 1823
SatI	GCNGC	5 cut(s)	747, 976, 1350, 1446, 1839
Sau96I	GGNCC	2 cut(s)	20, 893
ScaI	AGTACT	2 cut(s)	920, 1219
SchI	GAGTC	3 cut(s)	589, 786, 1760
ScrFI	CCNGG	4 cut(s)	127, 260, 784, 1758
SduI	GDGCHC	3 cut(s)	587, 1042, 1461
SfaNI	GCATC	6 cut(s)	299, 520, 843, 1216, 1608, 1709
SfoI	GGCGCC	2 cut(s)	439, 1003
SgrAI	CRCCGGYG	1 cut(s)	375
SinI	GGWCC	2 cut(s)	20, 893
SmiMI	CAYNNNNRTG	3 cut(s)	1304, 1604, 1607
SmlI	CTYRAG	4 cut(s)	1019, 1082, 1271, 1469
SmoI	CTYRAG	4 cut(s)	1019, 1082, 1271, 1469
Sse9I	AATT	3 cut(s)	270, 617, 1833
SseBI	AGGCCT	1 cut(s)	169
SsiI	CCGC	3 cut(s)	571, 746, 1184
SspDI	GGCGCC	2 cut(s)	437, 1001
SspMI	CTAG	5 cut(s)	476, 960, 1478, 1505, 1778
SstI	GAGCTC	1 cut(s)	1461
StuI	AGGCCT	1 cut(s)	169
StyD4I	CCNGG	4 cut(s)	125, 258, 782, 1756
StyI	CCWWGG	1 cut(s)	475
TaaI	ACNGT	4 cut(s)	807, 1015, 1028, 1678
TaiI	ACGT	5 cut(s)	417, 520, 584, 1375, 1584
TaqI	TCGA	8 cut(s)	555, 690, 752, 791, 830, 1142, 1455, 1665
TasI	AATT	3 cut(s)	270, 617, 1833
TatI	WGTACW	2 cut(s)	918, 1217
TauI	GCSGC	1 cut(s)	749
TfiI	GAWTC	8 cut(s)	647, 719, 754, 827, 874, 1099, 1314, 1512
Tru1I	TTAA	8 cut(s)	62, 1020, 1083, 1170, 1620, 1718, 1734, 1823
Tru9I	TTAA	8 cut(s)	62, 1020, 1083, 1170, 1620, 1718, 1734, 1823
TscAI	CASTG	1 cut(s)	1683
TseFI	GTSAC	6 cut(s)	383, 418, 577, 778, 1648, 1859
TseI	GCWGC	4 cut(s)	975, 1349, 1445, 1838
Tsp45I	GTSAC	6 cut(s)	383, 418, 577, 778, 1648, 1859
TspDTI	ATGAA	7 cut(s)	17, 129, 840, 1253, 1540, 1778, 1880
TspGWI	ACGGA	8 cut(s)	149, 206, 222, 300, 343, 383, 598, 708
TspRI	CASTG	1 cut(s)	1683
Vha464I	CTTAAG	2 cut(s)	1019, 1082
VpaK11BI	GGWCC	2 cut(s)	20, 893
VspI	ATTAAT	1 cut(s)	1620
XceI	RCATGY	2 cut(s)	36, 1468
XmaJI	CCTAGG	1 cut(s)	475
XmnI	GAANNNNTTC	1 cut(s)	651
XspI	CTAG	5 cut(s)	476, 960, 1478, 1505, 1778
ZrmI	AGTACT	2 cut(s)	920, 1219
Zsp2I	ATGCAT	1 cut(s)	1601

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.