Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0003985

Physical Location & Seq

Genomic Coordinates Reverse (-)

9108589 .. 9112451

Gene Structure 3863 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG111500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1527 bp

ATGGACGTTCGCCGGCGACCCCCACTACCTCCCCGCGCCTTCGTCGGCGAACCCATGAAGCAGCACCAGAGAAATCACCCCAAGGCGTCCGACGCGCTGCCGTTGCCGTTGTACTTGACCAACGGCTTGTTCTTCACGCTCTTCTTCTCCGTCGCTTACTTCCTCCTCCACCGCTGGCGCGAGAAGATCCGCACCTCCATTCCCCTCCACGTCGTCACGCTCTCCGAGATCGCCGCCCTCTTCTCCCTCTTCGCCTCCGTCATCTACCTCCTCGGCTTCTTCGGCATTGACTTCGTCCAGTCCTTCGTCGCCCCCCGCGCTCCCCACGACCCCTGGAACGACGTTGGAAAGGCGCGGCGGCCCCGAAACGATGTCGTAAGGACGCCACGCGTCAGAAACGACGTCGTAAAGGGGTCGCAGTTAGTGCCGCAGTGCGAGAACCAGCGCTGCGGCACTAACTCTCCTCCTCTTTCTGTTTCGGTACGGCCCGAGCAGGAGGACGAGGAGATAATTAATTCCGTAGTGTCCGGAGCGACGCCGTCGCACACTCTGGAGTCGAATCTCGGGGACTGCCGGAGAGCCGCCGCCATACGGCGGGAGGCCCTGCAGCGAAGGACGAGTCGTTCGCTGGAGGGACTCCCCTTGGAAGGCTTCGATTACGACTCTATACTCGGACAGTGCTGCGAGATGCCGATTGGGTATGTGCAGATTCCGGTGGGAGTCGCCGGACCTCTGCTGCTCGACGGCGAGGAGCTCACTATCCCAATGGCGACCACCGAGGGCTGCCTCGTCGCCAGCACCAACCGAGGCTGCAAGGCCATTTACGCTTCCGGTGGGGCCCACAGCGTCATTCTCAAGGACGGCATGACCAGAGCTCCGGTCGTGAGGTTCAACTCCGCCTTCAGAGCGGCCGAGCTCAAGTTCTTCCTGGAGGACCCGGAAAACTTCGATTCTGTTGCCATCGTTTTCAACAGATCTAGTAGATTTGCAAAGCTTCAGGACATTAAATGCGCGGTTGCAGGCAAGAATCTGTTCATGAGGTTTACATGCAGCACCGGAGATGCGATGGGGATGAACATGGTCTCCAAAGGGGTCCAAAATGTGTTGGATTTTCTCCAGAGTGACTTCCCCGACATGGATGTTATCGGCATCTCCGGGAATTTCTGCTCAGACAAGAAACCGGCAGCGGTGAATTGGATAGAAGGGCGAGGCAAATCAGTAGTGTGCGAGACTGTGATCAATGAAGAAGTGGTGAGGAAGGTACTGAAGACCAATGTAGCTGCCTTGGTGGAGCTCAACATGCTTAAAAACCTTACCGGGTCTGCAATGGCCGGTGCTCTTGGTGGGTTCAATGCCCACGCCAGCAACATTGTCAGCGCAGTGTACATAGCTACCGGCCAGGACCCTGCTCAGAATGTGGAGAGCTCTCACTGCATTACCATGATGGAGGCCATAAACGATGGAAAGGACCTACATGTCTCAGTCACCATGCCTTCCATTGAGGTACAAAACAAAACAACTAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004420 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005778 GO:0005783 GO:0005789 GO:0006629 GO:0006694 GO:0006720 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0009058 GO:0009987 GO:0012505 GO:0016020 GO:0016125 GO:0016126 GO:0016491 GO:0016614 GO:0016616 GO:0031090 GO:0031903 GO:0031984 GO:0042175 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098588 GO:0098805 GO:0098827 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 ko04152 ko04976 map00900 map01100 map01110 map01130 map04152 map04976

Pfam Domains

Protein Families

HMG-CoA_red

Protein Analysis

508

Amino Acids

55.6

Weight (kDa)

7.55

Isoelectric Point (pI)

40.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMG-CoA_red	PF00368	195 - 502	7.6e-117	Hydroxymethylglutaryl-coenzyme A reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003985)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76490
fragaria_vesca	FvH4_1g09980 FvH4_5g26180
malus_domestica	MD02G1108500.v1.1 MD02G1108700.v1.1 MD04G1238500.v1.1 MD08G1025200.v1.1 MD15G1227900.v1.1
prunus_persica	Prupe.7G187000_v2.0.a1 Prupe.7G187500_v2.0.a1
pyrus_communis	pycom02g08710 pycom02g08720 pycom15g20270
rosa_chinensis	RchiOBHm_Chr2g0096771 RchiOBHm_Chr7g0216871
rosa_laevigata	RLG00000002531 RLG00000016668
rosa_multiflora	Rmu_sc0000854.1_g000004 Rmu_sc0004291.1_g000010 Rmu_sc0030893.1_g000001
rosa_roxburghii	Rroxscaffold_2G00145340 Rroxscaffold_3G00242800
rosa_rugosa	Rorug02G0060600 Rorug07G0164000.1
rosa_samantha	Rh2AG107800 Rh2BG110200 Rh2CG112100 Rh2DG111500 Rh7AG303400 Rh7BG295400 Rh7CG322100
rosa_wichuraiana	Rw2G008350 Rw7G025820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1475
AatII	GACGTC	1 cut(s)	405
AccBSI	CCGCTC	1 cut(s)	908
AccII	CGCG	7 cut(s)	36, 95, 180, 318, 355, 390, 1013
AccIII	TCCGGA	1 cut(s)	527
AclWI	GGATC	1 cut(s)	181
AcoI	YGGCCR	3 cut(s)	909, 1329, 1396
AcsI	RAATTY	1 cut(s)	1159
AcuI	CTGAAG	3 cut(s)	886, 980, 1286
AcyI	GRCGYC	4 cut(s)	86, 383, 402, 536
AfaI	GTAC	5 cut(s)	113, 483, 1263, 1385, 1506
AfeI	AGCGCT	1 cut(s)	446
AfiI	CCNNNNNNNGG	4 cut(s)	591, 594, 647, 1135
AflIII	ACRYGT	2 cut(s)	388, 1474
AgsI	TTSAA	3 cut(s)	892, 970, 1351
AjiI	CACGTC	1 cut(s)	211
AjnI	CCWGG	3 cut(s)	332, 927, 1398
AjuI	GAANNNNNNNTTGG	2 cut(s)	113, 145
AloI	GAACNNNNNNTCC	4 cut(s)	607, 639, 1067, 1099
AluBI	AGCT	8 cut(s)	754, 875, 916, 994, 1280, 1294, 1391, 1425
AluI	AGCT	8 cut(s)	754, 875, 916, 994, 1280, 1294, 1391, 1425
Alw21I	GWGCWC	6 cut(s)	756, 877, 918, 1296, 1339, 1427
Alw26I	GTCTC	3 cut(s)	1087, 1223, 1483
AlwI	GGATC	1 cut(s)	181
Ama87I	CYCGRG	2 cut(s)	488, 563
Aor13HI	TCCGGA	1 cut(s)	527
Aor51HI	AGCGCT	1 cut(s)	446
AoxI	GGCC	9 cut(s)	359, 485, 600, 816, 837, 909, 1329, 1396, 1449
ApaI	GGGCCC	1 cut(s)	841
ApoI	RAATTY	1 cut(s)	1159
ArsI	GACNNNNNNTTYG	4 cut(s)	604, 607, 636, 639
AseI	ATTAAT	1 cut(s)	513
Asp700I	GAANNNNTTC	1 cut(s)	1031
AspLEI	GCGC	8 cut(s)	38, 97, 180, 320, 355, 447, 1013, 1379
AsuC2I	CCSGG	3 cut(s)	938, 1156, 1318
AsuHPI	GGTGA	4 cut(s)	68, 1201, 1264, 1477
AvaI	CYCGRG	2 cut(s)	488, 563
AvaII	GGWCC	5 cut(s)	728, 934, 1093, 1402, 1468
BaeGI	GKGCMC	1 cut(s)	841
BanII	GRGCYC	6 cut(s)	756, 841, 877, 918, 1296, 1427
BbsI	GAAGAC	1 cut(s)	1274
Bbv12I	GWGCWC	6 cut(s)	756, 877, 918, 1296, 1339, 1427
BccI	CCATC	4 cut(s)	968, 1060, 1438, 1454
BceAI	ACGGC	8 cut(s)	85, 91, 139, 500, 523, 608, 760, 877
BcgI	CGANNNNNNTGC	4 cut(s)	274, 308, 938, 972
BciT130I	CCWGG	3 cut(s)	334, 929, 1400
BclI	TGATCA	1 cut(s)	1236
BcnI	CCSGG	3 cut(s)	938, 1156, 1318
BcoDI	GTCTC	3 cut(s)	1087, 1223, 1483
BfaI	CTAG	1 cut(s)	978
BfmI	CTRYAG	1 cut(s)	605
BfoI	RGCGCY	1 cut(s)	448
BglII	AGATCT	1 cut(s)	974
Bme1390I	CCNGG	6 cut(s)	334, 929, 938, 1156, 1318, 1400
Bme18I	GGWCC	5 cut(s)	728, 934, 1093, 1402, 1468
BmeT110I	CYCGRG	2 cut(s)	488, 563
BmgBI	CACGTC	1 cut(s)	211
BmiI	GGNNCC	6 cut(s)	362, 838, 839, 936, 1094, 1404
BmrFI	CCNGG	6 cut(s)	334, 929, 938, 1156, 1318, 1400
BmsI	GCATC	3 cut(s)	678, 1051, 1158
BpiI	GAAGAC	1 cut(s)	1274
BpmI	CTGGAG	4 cut(s)	572, 650, 950, 1100
BpuEI	CTTGAG	2 cut(s)	839, 902
BpuMI	CCSGG	3 cut(s)	938, 1156, 1318
BsaHI	GRCGYC	4 cut(s)	86, 383, 402, 536
BsaI	GGTCTC	1 cut(s)	1087
BsaJI	CCNNGG	7 cut(s)	81, 271, 332, 642, 777, 805, 1284
BsaWI	WCCGGW	5 cut(s)	527, 712, 830, 877, 1055
BsaXI	ACNNNNNCTCC	6 cut(s)	445, 475, 859, 889, 1067, 1097
Bsc4I	CCNNNNNNNGG	4 cut(s)	591, 594, 647, 1135
Bse118I	RCCGGY	4 cut(s)	12, 1180, 1331, 1394
Bse1I	ACTGG	1 cut(s)	298
Bse3DI	GCAATG	1 cut(s)	1332
BseAI	TCCGGA	1 cut(s)	527
BseBI	CCWGG	3 cut(s)	334, 929, 1400
BseDI	CCNNGG	7 cut(s)	81, 271, 332, 642, 777, 805, 1284
BseGI	GGATG	2 cut(s)	1077, 1144
BseLI	CCNNNNNNNGG	4 cut(s)	591, 594, 647, 1135
BseMI	GCAATG	1 cut(s)	1332
BseMII	CTCAG	3 cut(s)	1182, 1424, 1494
BseNI	ACTGG	1 cut(s)	298
BseRI	GAGGAG	6 cut(s)	155, 260, 453, 456, 518, 764
BseSI	GKGCMC	1 cut(s)	841
BseX3I	CGGCCG	1 cut(s)	909
BsgI	GTGCAG	1 cut(s)	725
Bsh1236I	CGCG	7 cut(s)	36, 95, 180, 318, 355, 390, 1013
Bsh1285I	CGRYCG	2 cut(s)	882, 912
BshFI	GGCC	9 cut(s)	361, 487, 602, 818, 839, 911, 1331, 1398, 1451
BsiEI	CGRYCG	2 cut(s)	882, 912
BsiHKAI	GWGCWC	6 cut(s)	756, 877, 918, 1296, 1339, 1427
BsiHKCI	CYCGRG	2 cut(s)	488, 563
BslFI	GGGAC	2 cut(s)	581, 648
BslI	CCNNNNNNNGG	4 cut(s)	591, 594, 647, 1135
BsmAI	GTCTC	3 cut(s)	1087, 1223, 1483
BsmFI	GGGAC	2 cut(s)	581, 648
BsnI	GGCC	9 cut(s)	361, 487, 602, 818, 839, 911, 1331, 1398, 1451
Bso31I	GGTCTC	1 cut(s)	1087
BsoBI	CYCGRG	2 cut(s)	488, 563
Bsp120I	GGGCCC	1 cut(s)	837
Bsp1286I	GDGCHC	7 cut(s)	756, 841, 877, 918, 1296, 1339, 1427
Bsp13I	TCCGGA	1 cut(s)	527
Bsp1407I	TGTACA	1 cut(s)	1383
Bsp143I	GATC	4 cut(s)	186, 228, 974, 1236
BspANI	GGCC	9 cut(s)	361, 487, 602, 818, 839, 911, 1331, 1398, 1451
BspCNI	CTCAG	3 cut(s)	1181, 1423, 1493
BspEI	TCCGGA	1 cut(s)	527
BspFNI	CGCG	7 cut(s)	36, 95, 180, 318, 355, 390, 1013
BspHI	TCATGA	1 cut(s)	1035
BspLI	GGNNCC	6 cut(s)	362, 838, 839, 936, 1094, 1404
BspMAI	CTGCAG	1 cut(s)	609
BspPI	GGATC	1 cut(s)	181
BspQI	GCTCTTC	1 cut(s)	146
BspTNI	GGTCTC	1 cut(s)	1087
BsrBI	CCGCTC	1 cut(s)	908
BsrDI	GCAATG	1 cut(s)	1332
BsrFI	RCCGGY	4 cut(s)	12, 1180, 1331, 1394
BsrGI	TGTACA	1 cut(s)	1383
BsrI	ACTGG	1 cut(s)	298
BssAI	RCCGGY	4 cut(s)	12, 1180, 1331, 1394
BssECI	CCNNGG	7 cut(s)	81, 271, 332, 642, 777, 805, 1284
BssMI	GATC	4 cut(s)	186, 228, 974, 1236
BssNI	GRCGYC	4 cut(s)	86, 383, 402, 536
BssT1I	CCWWGG	3 cut(s)	81, 642, 1284
Bst2UI	CCWGG	3 cut(s)	334, 929, 1400
Bst4CI	ACNGT	2 cut(s)	678, 1234
Bst6I	CTCTTC	3 cut(s)	146, 245, 254
BstACI	GRCGYC	4 cut(s)	86, 383, 402, 536
BstAPI	GCANNNNNTGC	1 cut(s)	424
BstAUI	TGTACA	1 cut(s)	1383
BstC8I	GCNNGC	5 cut(s)	14, 176, 796, 1021, 1363
BstDEI	CTNAG	3 cut(s)	1168, 1410, 1480
BstF5I	GGATG	2 cut(s)	1077, 1144
BstFNI	CGCG	7 cut(s)	36, 95, 180, 318, 355, 390, 1013
BstH2I	RGCGCY	1 cut(s)	448
BstHHI	GCGC	8 cut(s)	38, 97, 180, 320, 355, 447, 1013, 1379
BstKTI	GATC	4 cut(s)	189, 231, 977, 1239
BstMAI	GTCTC	3 cut(s)	1087, 1223, 1483
BstMBI	GATC	4 cut(s)	186, 228, 974, 1236
BstMCI	CGRYCG	2 cut(s)	882, 912
BstMWI	GCNNNNNNNGC	9 cut(s)	92, 103, 282, 317, 424, 824, 905, 1300, 1431
BstNI	CCWGG	3 cut(s)	334, 929, 1400
BstNSI	RCATGY	3 cut(s)	1050, 1303, 1478
BstSCI	CCNGG	6 cut(s)	332, 927, 936, 1154, 1316, 1398
BstSFI	CTRYAG	1 cut(s)	605
BstSLI	GKGCMC	1 cut(s)	841
BstUI	CGCG	7 cut(s)	36, 95, 180, 318, 355, 390, 1013
BstV2I	GAAGAC	1 cut(s)	1274
BstX2I	RGATCY	2 cut(s)	186, 974
BstYI	RGATCY	2 cut(s)	186, 974
BstZI	CGGCCG	1 cut(s)	909
BsuRI	GGCC	9 cut(s)	361, 487, 602, 818, 839, 911, 1331, 1398, 1451
BtgZI	GCGATG	1 cut(s)	1079
BtrI	CACGTC	1 cut(s)	211
BtsCI	GGATG	2 cut(s)	1077, 1144
BtsI	GCAGTG	3 cut(s)	437, 1386, 1429
BtsIMutI	CAGTG	4 cut(s)	437, 683, 1386, 1429
Cac8I	GCNNGC	5 cut(s)	14, 176, 796, 1021, 1363
CciI	TCATGA	1 cut(s)	1035
CfoI	GCGC	8 cut(s)	38, 97, 180, 320, 355, 447, 1013, 1379
Cfr10I	RCCGGY	4 cut(s)	12, 1180, 1331, 1394
CseI	GACGC	6 cut(s)	75, 101, 379, 391, 544, 835
Csp6I	GTAC	5 cut(s)	112, 482, 1262, 1384, 1505
CviQI	GTAC	5 cut(s)	112, 482, 1262, 1384, 1505
DdeI	CTNAG	3 cut(s)	1168, 1410, 1480
DpnI	GATC	4 cut(s)	188, 230, 976, 1238
DpnII	GATC	4 cut(s)	186, 228, 974, 1236
DrdI	GACNNNNNNGTC	1 cut(s)	1475
DseDI	GACNNNNNNGTC	1 cut(s)	1475
EaeI	YGGCCR	3 cut(s)	909, 1329, 1396
EagI	CGGCCG	1 cut(s)	909
Eam1104I	CTCTTC	3 cut(s)	146, 245, 254
EarI	CTCTTC	3 cut(s)	146, 245, 254
EciI	GGCGGA	1 cut(s)	886
Ecl136II	GAGCTC	5 cut(s)	754, 875, 916, 1294, 1425
EclXI	CGGCCG	1 cut(s)	909
Eco130I	CCWWGG	3 cut(s)	81, 642, 1284
Eco24I	GRGCYC	6 cut(s)	756, 841, 877, 918, 1296, 1427
Eco31I	GGTCTC	1 cut(s)	1087
Eco47I	GGWCC	5 cut(s)	728, 934, 1093, 1402, 1468
Eco47III	AGCGCT	1 cut(s)	446
Eco52I	CGGCCG	1 cut(s)	909
Eco53kI	GAGCTC	5 cut(s)	754, 875, 916, 1294, 1425
Eco57I	CTGAAG	3 cut(s)	886, 980, 1286
Eco88I	CYCGRG	2 cut(s)	488, 563
EcoICRI	GAGCTC	5 cut(s)	754, 875, 916, 1294, 1425
EcoO109I	RGGNCCY	5 cut(s)	601, 837, 934, 1402, 1468
EcoRII	CCWGG	3 cut(s)	332, 927, 1398
EcoT14I	CCWWGG	3 cut(s)	81, 642, 1284
EcoT38I	GRGCYC	6 cut(s)	756, 841, 877, 918, 1296, 1427
ErhI	CCWWGG	3 cut(s)	81, 642, 1284
FaqI	GGGAC	2 cut(s)	581, 648
FauI	CCCGC	3 cut(s)	41, 323, 588
FbaI	TGATCA	1 cut(s)	1236
FokI	GGATG	2 cut(s)	1084, 1151
FriOI	GRGCYC	6 cut(s)	756, 841, 877, 918, 1296, 1427
FspBI	CTAG	1 cut(s)	978
GlaI	GCGC	8 cut(s)	37, 96, 179, 319, 354, 446, 1012, 1378
GsuI	CTGGAG	4 cut(s)	572, 650, 950, 1100
HaeII	RGCGCY	1 cut(s)	448
HaeIII	GGCC	9 cut(s)	361, 487, 602, 818, 839, 911, 1331, 1398, 1451
HgaI	GACGC	6 cut(s)	75, 101, 379, 391, 544, 835
HhaI	GCGC	8 cut(s)	38, 97, 180, 320, 355, 447, 1013, 1379
Hin1I	GRCGYC	4 cut(s)	86, 383, 402, 536
Hin6I	GCGC	8 cut(s)	36, 95, 178, 318, 353, 445, 1011, 1377
HinP1I	GCGC	8 cut(s)	36, 95, 178, 318, 353, 445, 1011, 1377
HindIII	AAGCTT	1 cut(s)	992
HinfI	GANTC	9 cut(s)	554, 559, 619, 636, 662, 709, 720, 950, 1027
HphI	GGTGA	4 cut(s)	68, 1201, 1264, 1477
Hpy166II	GTNNAC	2 cut(s)	1044, 1384
Hpy188I	TCNGA	7 cut(s)	91, 226, 395, 674, 905, 1171, 1413
Hpy188III	TCNNGA	6 cut(s)	528, 551, 883, 998, 1036, 1117
Hpy8I	GTNNAC	2 cut(s)	1044, 1384
HpyAV	CCTTC	8 cut(s)	49, 313, 606, 641, 910, 1196, 1252, 1503
HpyCH4III	ACNGT	2 cut(s)	678, 1234
HpyCH4IV	ACGT	4 cut(s)	6, 210, 342, 402
HpyCH4V	TGCA	8 cut(s)	607, 706, 813, 989, 1019, 1050, 1325, 1434
HpyF10VI	GCNNNNNNNGC	9 cut(s)	92, 103, 282, 317, 424, 824, 905, 1300, 1431
HpyF3I	CTNAG	3 cut(s)	1168, 1410, 1480
HpySE526I	ACGT	4 cut(s)	6, 210, 342, 402
Hsp92I	GRCGYC	4 cut(s)	86, 383, 402, 536
HspAI	GCGC	8 cut(s)	36, 95, 178, 318, 353, 445, 1011, 1377
Kpn2I	TCCGGA	1 cut(s)	527
KroI	GCCGGC	1 cut(s)	12
KroNI	GCCGGC	1 cut(s)	14
Ksp22I	TGATCA	1 cut(s)	1236
Kzo9I	GATC	4 cut(s)	186, 228, 974, 1236
LguI	GCTCTTC	1 cut(s)	146
LmnI	GCTCC	5 cut(s)	325, 530, 751, 880, 1291
LweI	GCATC	3 cut(s)	678, 1051, 1158
MaeI	CTAG	1 cut(s)	978
MaeII	ACGT	4 cut(s)	6, 210, 342, 402
MaeIII	GTNAC	3 cut(s)	214, 1121, 1483
MalI	GATC	4 cut(s)	188, 230, 976, 1238
MbiI	CCGCTC	1 cut(s)	908
MboI	GATC	4 cut(s)	186, 228, 974, 1236
MflI	RGATCY	2 cut(s)	186, 974
MhlI	GDGCHC	7 cut(s)	756, 841, 877, 918, 1296, 1339, 1427
MluCI	AATT	4 cut(s)	510, 514, 1159, 1192
MluI	ACGCGT	1 cut(s)	388
MlyI	GAGTC	5 cut(s)	563, 628, 630, 656, 729
MmeI	TCCRAC	3 cut(s)	114, 325, 1086
MreI	CGCCGGCG	1 cut(s)	12
MroI	TCCGGA	1 cut(s)	527
MroNI	GCCGGC	1 cut(s)	12
MroXI	GAANNNNTTC	1 cut(s)	1031
MseI	TTAA	3 cut(s)	513, 1005, 1305
MslI	CAYNNNNRTG	1 cut(s)	1439
MspA1I	CMGCKG	2 cut(s)	174, 1187
MspR9I	CCNGG	6 cut(s)	334, 929, 938, 1156, 1318, 1400
MvaI	CCWGG	3 cut(s)	334, 929, 1400
MvnI	CGCG	7 cut(s)	36, 95, 180, 318, 355, 390, 1013
MwoI	GCNNNNNNNGC	9 cut(s)	92, 103, 282, 317, 424, 824, 905, 1300, 1431
NaeI	GCCGGC	1 cut(s)	14
NciI	CCSGG	3 cut(s)	938, 1156, 1318
NdeII	GATC	4 cut(s)	186, 228, 974, 1236
NgoMIV	GCCGGC	1 cut(s)	12
NlaIV	GGNNCC	6 cut(s)	362, 838, 839, 936, 1094, 1404
NmeAIII	GCCGAG	2 cut(s)	252, 937
NmuCI	GTSAC	3 cut(s)	214, 1121, 1483
NspI	RCATGY	3 cut(s)	1050, 1303, 1478
PagI	TCATGA	1 cut(s)	1035
PciI	ACATGT	1 cut(s)	1474
PciSI	GCTCTTC	1 cut(s)	146
PdiI	GCCGGC	1 cut(s)	14
PdmI	GAANNNNTTC	1 cut(s)	1031
PfeI	GAWTC	4 cut(s)	559, 709, 950, 1027
PflFI	GACNNNGTC	2 cut(s)	293, 538
PfoI	TCCNGGA	2 cut(s)	927, 1154
PleI	GAGTC	5 cut(s)	562, 627, 630, 656, 728
PpsI	GAGTC	5 cut(s)	562, 627, 630, 656, 728
PpuMI	RGGWCCY	3 cut(s)	934, 1402, 1468
PscI	ACATGT	1 cut(s)	1474
PshBI	ATTAAT	1 cut(s)	513
Psp124BI	GAGCTC	5 cut(s)	756, 877, 918, 1296, 1427
Psp5II	RGGWCCY	3 cut(s)	934, 1402, 1468
Psp6I	CCWGG	3 cut(s)	332, 927, 1398
PspGI	CCWGG	3 cut(s)	332, 927, 1398
PspN4I	GGNNCC	6 cut(s)	362, 838, 839, 936, 1094, 1404
PspOMI	GGGCCC	1 cut(s)	837
PspPPI	RGGWCCY	3 cut(s)	934, 1402, 1468
PstI	CTGCAG	1 cut(s)	609
PsuI	RGATCY	2 cut(s)	186, 974
PsyI	GACNNNGTC	2 cut(s)	293, 538
RsaI	GTAC	5 cut(s)	113, 483, 1263, 1385, 1506
RsaNI	GTAC	5 cut(s)	112, 482, 1262, 1384, 1505
RseI	CAYNNNNRTG	1 cut(s)	1439
SacI	GAGCTC	5 cut(s)	756, 877, 918, 1296, 1427
SapI	GCTCTTC	1 cut(s)	146
SaqAI	TTAA	3 cut(s)	513, 1005, 1305
Sau3AI	GATC	4 cut(s)	186, 228, 974, 1236
SchI	GAGTC	5 cut(s)	563, 628, 630, 656, 729
ScrFI	CCNGG	6 cut(s)	334, 929, 938, 1156, 1318, 1400
SduI	GDGCHC	7 cut(s)	756, 841, 877, 918, 1296, 1339, 1427
SfaNI	GCATC	3 cut(s)	678, 1051, 1158
SfcI	CTRYAG	1 cut(s)	605
SgrAI	CRCCGGYG	1 cut(s)	12
SinI	GGWCC	5 cut(s)	728, 934, 1093, 1402, 1468
SmiMI	CAYNNNNRTG	1 cut(s)	1439
SmlI	CTYRAG	2 cut(s)	854, 917
SmoI	CTYRAG	2 cut(s)	854, 917
Sse9I	AATT	4 cut(s)	510, 514, 1159, 1192
SspMI	CTAG	1 cut(s)	978
SstI	GAGCTC	5 cut(s)	756, 877, 918, 1296, 1427
StyD4I	CCNGG	6 cut(s)	332, 927, 936, 1154, 1316, 1398
StyI	CCWWGG	3 cut(s)	81, 642, 1284
TaaI	ACNGT	2 cut(s)	678, 1234
TaiI	ACGT	4 cut(s)	9, 213, 345, 405
TaqI	TCGA	4 cut(s)	557, 654, 741, 948
TasI	AATT	4 cut(s)	510, 514, 1159, 1192
TatI	WGTACW	2 cut(s)	111, 1383
TauI	GCSGC	8 cut(s)	236, 358, 361, 430, 453, 584, 587, 911
TfiI	GAWTC	4 cut(s)	559, 709, 950, 1027
Tru1I	TTAA	3 cut(s)	513, 1005, 1305
Tru9I	TTAA	3 cut(s)	513, 1005, 1305
TscAI	CASTG	4 cut(s)	437, 683, 1386, 1436
TseFI	GTSAC	3 cut(s)	214, 1121, 1483
Tsp45I	GTSAC	3 cut(s)	214, 1121, 1483
TspDTI	ATGAA	4 cut(s)	71, 1024, 1088, 1257
TspGWI	ACGGA	3 cut(s)	139, 247, 508
TspRI	CASTG	4 cut(s)	437, 683, 1386, 1436
Tth111I	GACNNNGTC	2 cut(s)	293, 538
VpaK11BI	GGWCC	5 cut(s)	728, 934, 1093, 1402, 1468
VspI	ATTAAT	1 cut(s)	513
XapI	RAATTY	1 cut(s)	1159
XceI	RCATGY	3 cut(s)	1050, 1303, 1478
XmnI	GAANNNNTTC	1 cut(s)	1031
XspI	CTAG	1 cut(s)	978
ZraI	GACGTC	1 cut(s)	403

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.