Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0003985

Physical Location & Seq

Genomic Coordinates Reverse (-)

8741349 .. 8744890

Gene Structure 3542 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1108500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGGACGACCTCCGCCGGCGACCACCCCTCCCCAAACCCCACCACCACCGCCGCCCTAACCAAACCGCCTCCGCCGCGGACCCAAATTCCTACCCCAAGGCTTCCGACGCGCTTCCTCTGCCTCTTTACCTCACCAATGGCCTCTTCGTCACTCTCTTCTTCACCGTTGCCTACTTCCTCCTGAACCGGTGGCGCGAGAAGATCCGCACGTCCACGCCGCTTCACGTAGTCACGCTCTTGGAGATCGCCGCCATCTTCTCTCTCTTCGCCTCCGTTATCTACCTCCTCGGCTTCTTCGGTATAGACTTCGTCCAGTCCTTCGTCGCTCCCCGTACCCCGCACGACGACTGGCACGAGCACGAGGTTCTCGAATCGCCGCCGCCGCGTCCGCCTCAGCAGAAGAAAGACGAGCAGCTAATCTCTAAAGAAGACGAGGAGATCGTCGAGTCGGTGCTGTCCGGAACGACAGCGTCTTACGAGCTCGAATCGAAGCTCGGGGACTGCAAACGAGCTGCGGCGATCCGGCGCGAGGCGTTGCAGAAAACGACGGGTCGTTCGCTGGAGGGCCTGCCGCTGGAGGGCTTCGATTATCGGTCGATACTGGGACAGTGCTGTGAGAATCCGGTGGGGTATGTGCAGATCCCGGTGGGAGTCGCCGGACCGCTGCTTCTCGACGGAGAAGAGTACATGGTGCCAATGGCGACAACGGAGGGGTGCCTGGTGGCCAGCACCAATAGGGGATTCAAGGCAATCTACGCCTCAGGCGGCGCCGAGAGTGTCCTCTTCAACGACTCCATGACCAGAGCTCCAATTGTGAGGTTCCACTCCGTCGTTAGGGCTGCTCAGCTCAAGTTCTTCGTCGAGAACCCTCTCAATTTTGATGCTCTCGCCGTCGTTTTCAACAGGTCTAGCAGATTTGCAAAGCTCGAAAAGATTCGATGCGCGATAGCAGGCAGGAATCTGTACCTAAGGTTTTCATGCAGCACTGGAGATGCCATGGGGATGAACATGATCTCCAAAGGCGTTCAATATGTTATCGAATTCCTTCAAAATGAATTCCCAGACATGGAAGTTGTTGGCATCTCTGGAAATTTCTGCTCAGACAAGAAAGCAGCAGCCGTAAATTGGATTGAAGGGCGAGGGAAATCAGTAACTTGCGAGGCAGTCATCAAGGAGGAAGTGGTGAGGAAAGTACTGAAAACCGATGTGGATTCCCTTGCGAAGCTTAACGTGAATAAAAACCTTGTTGGGTCTGCCATGGCTGGTGCTCTTGGCGGGTTCAATGCCCACGCCAGCAATATTGTCTCTGCAGTCTTCATAGCCACTGGCCAGGACCCTGCTCAGAATATTGAGAGCTCTCACTGCATTACCTTGATGGAAGCCGACGGCAATGACCTTCATATCTCAGTCACCATGCCTTCCATTGAGGTGGGTACAGTTGGAGGAGGAACACAACTCGCATCCCAATCAGCCTGCTTGAACTTGCTCGGTGTCAAGGGCGCAAGCAAAGACTCTCCTGGTTTAAACTCAAGGCAACTGGCGAGAATTGTAGCTGGAGCTGTCCTAGCAGGGGAGCTTTCTCTCATGTCAGCCATCGCATCCGGGCAGCTAGTGAAGAGCCACATGAAATACAACCGATCTAGCAGGGACGTTGCAAACCTCGCCTCGGTAAACACGGGTAGAATACATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004420 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005777 GO:0005778 GO:0005783 GO:0005789 GO:0006629 GO:0006694 GO:0006720 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0009058 GO:0009526 GO:0009536 GO:0009987 GO:0012505 GO:0016020 GO:0016125 GO:0016126 GO:0016491 GO:0016614 GO:0016616 GO:0031090 GO:0031903 GO:0031966 GO:0031967 GO:0031975 GO:0031984 GO:0042170 GO:0042175 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044432 GO:0044435 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098588 GO:0098805 GO:0098827 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 ko04152 ko04976 map00900 map01100 map01110 map01130 map04152 map04976

Pfam Domains

Protein Families

HMG-CoA_red

Protein Analysis

564

Amino Acids

61.09

Weight (kDa)

7.19

Isoelectric Point (pI)

42.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMG-CoA_red	PF00368	172 - 546	3.4e-147	Hydroxymethylglutaryl-coenzyme A reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003985)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76490
fragaria_vesca	FvH4_1g09980 FvH4_5g26180
malus_domestica	MD02G1108500.v1.1 MD02G1108700.v1.1 MD04G1238500.v1.1 MD08G1025200.v1.1 MD15G1227900.v1.1
prunus_persica	Prupe.7G187000_v2.0.a1 Prupe.7G187500_v2.0.a1
pyrus_communis	pycom02g08710 pycom02g08720 pycom15g20270
rosa_chinensis	RchiOBHm_Chr2g0096771 RchiOBHm_Chr7g0216871
rosa_laevigata	RLG00000002531 RLG00000016668
rosa_multiflora	Rmu_sc0000854.1_g000004 Rmu_sc0004291.1_g000010 Rmu_sc0030893.1_g000001
rosa_roxburghii	Rroxscaffold_2G00145340 Rroxscaffold_3G00242800
rosa_rugosa	Rorug02G0060600 Rorug07G0164000.1
rosa_samantha	Rh2AG107800 Rh2BG110200 Rh2CG112100 Rh2DG111500 Rh7AG303400 Rh7BG295400 Rh7CG322100
rosa_wichuraiana	Rw2G008350 Rw7G025820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	691, 714, 767
AccII	CGCG	6 cut(s)	77, 110, 195, 385, 528, 944
AccIII	TCCGGA	1 cut(s)	458
AclWI	GGATC	3 cut(s)	196, 514, 634
AcoI	YGGCCR	2 cut(s)	723, 1327
AcsI	RAATTY	4 cut(s)	85, 1040, 1055, 1090
AcyI	GRCGYC	1 cut(s)	768
AfaI	GTAC	5 cut(s)	334, 686, 965, 1194, 1435
AfiI	CCNNNNNNNGG	8 cut(s)	529, 574, 578, 834, 1066, 1125, 1570, 1666
AgeI	ACCGGT	1 cut(s)	186
AgsI	TTSAA	8 cut(s)	745, 787, 901, 1028, 1049, 1133, 1282, 1480
AjiI	CACGTC	1 cut(s)	210
AjnI	CCWGG	3 cut(s)	717, 1329, 1516
AjuI	GAANNNNNNNTTGG	4 cut(s)	128, 160, 725, 757
AloI	GAACNNNNNNTCC	2 cut(s)	998, 1030
Alw21I	GWGCWC	5 cut(s)	360, 483, 808, 1270, 1358
Alw26I	GTCTC	1 cut(s)	1309
AlwI	GGATC	3 cut(s)	196, 514, 634
Ama87I	CYCGRG	1 cut(s)	494
Aor13HI	TCCGGA	1 cut(s)	458
AoxI	GGCC	4 cut(s)	139, 565, 723, 1327
ApeKI	GCWGC	8 cut(s)	412, 512, 664, 839, 981, 1112, 1115, 1606
ApoI	RAATTY	4 cut(s)	85, 1040, 1055, 1090
ArsI	GACNNNNNNTTYG	2 cut(s)	538, 570
AsiGI	ACCGGT	1 cut(s)	186
Asp700I	GAANNNNTTC	2 cut(s)	933, 1044
AspLEI	GCGC	6 cut(s)	112, 195, 528, 770, 944, 1502
AspS9I	GGNCC	4 cut(s)	79, 565, 659, 1333
AsuC2I	CCSGG	2 cut(s)	644, 1603
AsuHPI	GGTGA	4 cut(s)	124, 154, 1195, 1402
AvaI	CYCGRG	1 cut(s)	494
AvaII	GGWCC	3 cut(s)	79, 659, 1333
AxyI	CCTNAGG	2 cut(s)	760, 968
BalI	TGGCCA	2 cut(s)	725, 1329
BanI	GGYRCC	3 cut(s)	691, 714, 767
BanII	GRGCYC	3 cut(s)	483, 808, 1358
BauI	CACGAG	2 cut(s)	353, 359
BbsI	GAAGAC	2 cut(s)	435, 1306
Bbv12I	GWGCWC	5 cut(s)	360, 483, 808, 1270, 1358
BbvCI	CCTCAGC	1 cut(s)	393
BbvI	GCAGC	8 cut(s)	424, 499, 651, 826, 993, 1124, 1127, 1618
BccI	CCATC	3 cut(s)	260, 1369, 1601
BceAI	ACGGC	3 cut(s)	875, 1103, 1402
BciT130I	CCWGG	3 cut(s)	719, 1331, 1518
BcnI	CCSGG	2 cut(s)	644, 1603
BcoDI	GTCTC	1 cut(s)	1309
BfaI	CTAG	4 cut(s)	909, 1565, 1610, 1641
BfmI	CTRYAG	1 cut(s)	1308
BfoI	RGCGCY	1 cut(s)	771
BlpI	GCTNAGC	1 cut(s)	843
BmcAI	AGTACT	1 cut(s)	1194
Bme1390I	CCNGG	5 cut(s)	644, 719, 1331, 1518, 1603
Bme18I	GGWCC	3 cut(s)	79, 659, 1333
BmeT110I	CYCGRG	1 cut(s)	494
BmgBI	CACGTC	1 cut(s)	210
BmgT120I	GGNCC	4 cut(s)	79, 565, 659, 1333
BmiI	GGNNCC	6 cut(s)	81, 693, 716, 769, 821, 1335
BmrFI	CCNGG	5 cut(s)	644, 719, 1331, 1518, 1603
BmrI	ACTGGG	1 cut(s)	611
BmsI	GCATC	6 cut(s)	871, 929, 982, 1089, 1469, 1607
BmuI	ACTGGG	1 cut(s)	611
BpiI	GAAGAC	2 cut(s)	435, 1306
BpmI	CTGGAG	4 cut(s)	581, 596, 1008, 1575
Bpu10I	CCTNAGC	1 cut(s)	393
Bpu1102I	GCTNAGC	1 cut(s)	843
BpuEI	CTTGAG	2 cut(s)	833, 1513
BpuMI	CCSGG	2 cut(s)	644, 1603
BsaAI	YACGTR	1 cut(s)	226
BsaHI	GRCGYC	1 cut(s)	768
BsaJI	CCNNGG	6 cut(s)	75, 96, 286, 996, 1257, 1665
BsaWI	WCCGGW	3 cut(s)	186, 458, 622
BsaXI	ACNNNNNCTCC	6 cut(s)	12, 42, 790, 820, 998, 1028
Bsc4I	CCNNNNNNNGG	8 cut(s)	529, 574, 578, 834, 1066, 1125, 1570, 1666
Bse118I	RCCGGY	2 cut(s)	15, 186
Bse1I	ACTGG	6 cut(s)	313, 353, 606, 991, 1330, 1542
Bse21I	CCTNAGG	2 cut(s)	760, 968
Bse3DI	GCAATG	1 cut(s)	1396
BseAI	TCCGGA	1 cut(s)	458
BseBI	CCWGG	3 cut(s)	719, 1331, 1518
BseDI	CCNNGG	6 cut(s)	75, 96, 286, 996, 1257, 1665
BseGI	GGATG	3 cut(s)	1008, 1460, 1598
BseLI	CCNNNNNNNGG	8 cut(s)	529, 574, 578, 834, 1066, 1125, 1570, 1666
BseMI	GCAATG	1 cut(s)	1396
BseMII	CTCAG	6 cut(s)	407, 774, 857, 1113, 1355, 1419
BseNI	ACTGG	6 cut(s)	313, 353, 606, 991, 1330, 1542
BseRI	GAGGAG	3 cut(s)	275, 449, 1458
BseXI	GCAGC	8 cut(s)	424, 499, 651, 826, 993, 1124, 1127, 1618
BsgI	GTGCAG	1 cut(s)	656
Bsh1236I	CGCG	6 cut(s)	77, 110, 195, 385, 528, 944
Bsh1285I	CGRYCG	1 cut(s)	596
BshFI	GGCC	4 cut(s)	141, 567, 725, 1329
BshNI	GGYRCC	3 cut(s)	691, 714, 767
BshTI	ACCGGT	1 cut(s)	186
BsiEI	CGRYCG	1 cut(s)	596
BsiHKAI	GWGCWC	5 cut(s)	360, 483, 808, 1270, 1358
BsiHKCI	CYCGRG	1 cut(s)	494
BsiSI	CCGG	8 cut(s)	16, 187, 459, 523, 623, 644, 657, 1602
BslFI	GGGAC	3 cut(s)	512, 618, 1661
BslI	CCNNNNNNNGG	8 cut(s)	529, 574, 578, 834, 1066, 1125, 1570, 1666
BsmAI	GTCTC	1 cut(s)	1309
BsmFI	GGGAC	3 cut(s)	512, 618, 1661
BsnI	GGCC	4 cut(s)	141, 567, 725, 1329
BsoBI	CYCGRG	1 cut(s)	494
Bsp1286I	GDGCHC	5 cut(s)	360, 483, 808, 1270, 1358
Bsp13I	TCCGGA	1 cut(s)	458
Bsp143I	GATC	7 cut(s)	201, 243, 438, 519, 639, 1011, 1637
Bsp1720I	GCTNAGC	1 cut(s)	843
Bsp19I	CCATGG	2 cut(s)	996, 1257
BspANI	GGCC	4 cut(s)	141, 567, 725, 1329
BspCNI	CTCAG	6 cut(s)	406, 773, 856, 1112, 1354, 1418
BspEI	TCCGGA	1 cut(s)	458
BspFNI	CGCG	6 cut(s)	77, 110, 195, 385, 528, 944
BspLI	GGNNCC	6 cut(s)	81, 693, 716, 769, 821, 1335
BspMAI	CTGCAG	1 cut(s)	1312
BspPI	GGATC	3 cut(s)	196, 514, 634
BspQI	GCTCTTC	1 cut(s)	1610
BspT107I	GGYRCC	3 cut(s)	691, 714, 767
BsrDI	GCAATG	1 cut(s)	1396
BsrFI	RCCGGY	2 cut(s)	15, 186
BsrI	ACTGG	6 cut(s)	313, 353, 606, 991, 1330, 1542
BssAI	RCCGGY	2 cut(s)	15, 186
BssECI	CCNNGG	6 cut(s)	75, 96, 286, 996, 1257, 1665
BssMI	GATC	7 cut(s)	201, 243, 438, 519, 639, 1011, 1637
BssNI	GRCGYC	1 cut(s)	768
BssSI	CACGAG	2 cut(s)	353, 359
BssT1I	CCWWGG	3 cut(s)	96, 996, 1257
Bst2BI	CACGAG	2 cut(s)	353, 359
Bst2UI	CCWGG	3 cut(s)	719, 1331, 1518
Bst4CI	ACNGT	3 cut(s)	166, 609, 1438
Bst6I	CTCTTC	6 cut(s)	149, 161, 269, 675, 788, 1610
BstACI	GRCGYC	1 cut(s)	768
BstBAI	YACGTR	1 cut(s)	226
BstC8I	GCNNGC	7 cut(s)	17, 569, 727, 952, 1294, 1474, 1504
BstDEI	CTNAG	7 cut(s)	393, 760, 843, 968, 1099, 1341, 1405
BstDSI	CCRYGG	3 cut(s)	75, 996, 1257
BstF5I	GGATG	3 cut(s)	1008, 1460, 1598
BstFNI	CGCG	6 cut(s)	77, 110, 195, 385, 528, 944
BstH2I	RGCGCY	1 cut(s)	771
BstHHI	GCGC	6 cut(s)	112, 195, 528, 770, 944, 1502
BstKTI	GATC	7 cut(s)	204, 246, 441, 522, 642, 1014, 1640
BstMAI	GTCTC	1 cut(s)	1309
BstMBI	GATC	7 cut(s)	201, 243, 438, 519, 639, 1011, 1637
BstMCI	CGRYCG	1 cut(s)	596
BstMWI	GCNNNNNNNGC	9 cut(s)	74, 107, 118, 382, 388, 755, 1362, 1565, 1661
BstNI	CCWGG	3 cut(s)	719, 1331, 1518
BstSCI	CCNGG	5 cut(s)	642, 717, 1329, 1516, 1601
BstSFI	CTRYAG	1 cut(s)	1308
BstUI	CGCG	6 cut(s)	77, 110, 195, 385, 528, 944
BstV1I	GCAGC	8 cut(s)	424, 499, 651, 826, 993, 1124, 1127, 1618
BstV2I	GAAGAC	2 cut(s)	435, 1306
BstX2I	RGATCY	2 cut(s)	201, 639
BstXI	CCANNNNNNTGG	1 cut(s)	1429
BstYI	RGATCY	2 cut(s)	201, 639
Bsu36I	CCTNAGG	2 cut(s)	760, 968
BsuRI	GGCC	4 cut(s)	141, 567, 725, 1329
BtgI	CCRYGG	3 cut(s)	75, 996, 1257
BtgZI	GCGATG	1 cut(s)	1579
BtrI	CACGTC	1 cut(s)	210
BtsCI	GGATG	3 cut(s)	1008, 1460, 1598
BtsI	GCAGTG	1 cut(s)	1360
BtsIMutI	CAGTG	4 cut(s)	614, 984, 1323, 1360
Cac8I	GCNNGC	7 cut(s)	17, 569, 727, 952, 1294, 1474, 1504
CfoI	GCGC	6 cut(s)	112, 195, 528, 770, 944, 1502
Cfr10I	RCCGGY	2 cut(s)	15, 186
Cfr13I	GGNCC	4 cut(s)	79, 565, 659, 1333
Cfr42I	CCGCGG	1 cut(s)	78
CpoI	CGGWCCG	1 cut(s)	659
CseI	GACGC	3 cut(s)	116, 374, 459
Csp6I	GTAC	5 cut(s)	333, 685, 964, 1193, 1434
CspAI	ACCGGT	1 cut(s)	186
CspI	CGGWCCG	1 cut(s)	659
CviQI	GTAC	5 cut(s)	333, 685, 964, 1193, 1434
DdeI	CTNAG	7 cut(s)	393, 760, 843, 968, 1099, 1341, 1405
DinI	GGCGCC	1 cut(s)	769
DpnI	GATC	7 cut(s)	203, 245, 440, 521, 641, 1013, 1639
DpnII	GATC	7 cut(s)	201, 243, 438, 519, 639, 1011, 1637
DraI	TTTAAA	1 cut(s)	1524
EaeI	YGGCCR	2 cut(s)	723, 1327
Eam1104I	CTCTTC	6 cut(s)	149, 161, 269, 675, 788, 1610
EarI	CTCTTC	6 cut(s)	149, 161, 269, 675, 788, 1610
EciI	GGCGGA	2 cut(s)	61, 378
Ecl136II	GAGCTC	3 cut(s)	481, 806, 1356
Eco130I	CCWWGG	3 cut(s)	96, 996, 1257
Eco24I	GRGCYC	3 cut(s)	483, 808, 1358
Eco47I	GGWCC	3 cut(s)	79, 659, 1333
Eco53kI	GAGCTC	3 cut(s)	481, 806, 1356
Eco81I	CCTNAGG	2 cut(s)	760, 968
Eco88I	CYCGRG	1 cut(s)	494
EcoICRI	GAGCTC	3 cut(s)	481, 806, 1356
EcoO109I	RGGNCCY	2 cut(s)	565, 1333
EcoRI	GAATTC	2 cut(s)	1040, 1055
EcoRII	CCWGG	3 cut(s)	717, 1329, 1516
EcoT14I	CCWWGG	3 cut(s)	96, 996, 1257
EcoT38I	GRGCYC	3 cut(s)	483, 808, 1358
EgeI	GGCGCC	1 cut(s)	769
EheI	GGCGCC	1 cut(s)	769
ErhI	CCWWGG	3 cut(s)	96, 996, 1257
FaqI	GGGAC	3 cut(s)	512, 618, 1661
FauI	CCCGC	2 cut(s)	345, 1268
FokI	GGATG	3 cut(s)	1015, 1447, 1585
FriOI	GRGCYC	3 cut(s)	483, 808, 1358
FspBI	CTAG	4 cut(s)	909, 1565, 1610, 1641
GlaI	GCGC	6 cut(s)	111, 194, 527, 769, 943, 1501
GsuI	CTGGAG	4 cut(s)	581, 596, 1008, 1575
HaeII	RGCGCY	1 cut(s)	771
HaeIII	GGCC	4 cut(s)	141, 567, 725, 1329
HapII	CCGG	8 cut(s)	16, 187, 459, 523, 623, 644, 657, 1602
HgaI	GACGC	3 cut(s)	116, 374, 459
HhaI	GCGC	6 cut(s)	112, 195, 528, 770, 944, 1502
Hin1I	GRCGYC	1 cut(s)	768
Hin6I	GCGC	6 cut(s)	110, 193, 526, 768, 942, 1500
HinP1I	GCGC	6 cut(s)	110, 193, 526, 768, 942, 1500
HindIII	AAGCTT	1 cut(s)	1223
HpaII	CCGG	8 cut(s)	16, 187, 459, 523, 623, 644, 657, 1602
HphI	GGTGA	4 cut(s)	124, 154, 1195, 1402
Hpy166II	GTNNAC	2 cut(s)	213, 1672
Hpy188I	TCNGA	3 cut(s)	106, 1102, 1344
Hpy188III	TCNNGA	6 cut(s)	181, 368, 459, 671, 862, 1086
Hpy8I	GTNNAC	2 cut(s)	213, 1672
HpyAV	CCTTC	5 cut(s)	328, 1055, 1127, 1406, 1428
HpyCH4III	ACNGT	3 cut(s)	166, 609, 1438
HpyCH4IV	ACGT	4 cut(s)	209, 225, 1230, 1650
HpyCH4V	TGCA	8 cut(s)	504, 538, 637, 920, 981, 1310, 1365, 1655
HpyF10VI	GCNNNNNNNGC	9 cut(s)	74, 107, 118, 382, 388, 755, 1362, 1565, 1661
HpyF3I	CTNAG	7 cut(s)	393, 760, 843, 968, 1099, 1341, 1405
HpySE526I	ACGT	4 cut(s)	209, 225, 1230, 1650
Hsp92I	GRCGYC	1 cut(s)	768
HspAI	GCGC	6 cut(s)	110, 193, 526, 768, 942, 1500
KasI	GGCGCC	1 cut(s)	767
Kpn2I	TCCGGA	1 cut(s)	458
KroI	GCCGGC	1 cut(s)	15
KroNI	GCCGGC	1 cut(s)	17
KspI	CCGCGG	1 cut(s)	78
Kzo9I	GATC	7 cut(s)	201, 243, 438, 519, 639, 1011, 1637
LguI	GCTCTTC	1 cut(s)	1610
LmnI	GCTCC	4 cut(s)	331, 811, 1556, 1573
Lsp1109I	GCAGC	8 cut(s)	424, 499, 651, 826, 993, 1124, 1127, 1618
LweI	GCATC	6 cut(s)	871, 929, 982, 1089, 1469, 1607
MaeI	CTAG	4 cut(s)	909, 1565, 1610, 1641
MaeII	ACGT	4 cut(s)	209, 225, 1230, 1650
MaeIII	GTNAC	4 cut(s)	148, 229, 1150, 1408
MalI	GATC	7 cut(s)	203, 245, 440, 521, 641, 1013, 1639
MboI	GATC	7 cut(s)	201, 243, 438, 519, 639, 1011, 1637
MfeI	CAATTG	1 cut(s)	810
MflI	RGATCY	2 cut(s)	201, 639
MhlI	GDGCHC	5 cut(s)	360, 483, 808, 1270, 1358
MlsI	TGGCCA	2 cut(s)	725, 1329
MluCI	AATT	8 cut(s)	85, 810, 874, 1040, 1055, 1090, 1123, 1545
MluNI	TGGCCA	2 cut(s)	725, 1329
Mly113I	GGCGCC	1 cut(s)	768
MlyI	GAGTC	4 cut(s)	455, 660, 785, 1505
MmeI	TCCRAC	2 cut(s)	129, 1420
Mox20I	TGGCCA	2 cut(s)	725, 1329
MreI	CGCCGGCG	1 cut(s)	15
MroI	TCCGGA	1 cut(s)	458
MroNI	GCCGGC	1 cut(s)	15
MroXI	GAANNNNTTC	2 cut(s)	933, 1044
MscI	TGGCCA	2 cut(s)	725, 1329
MseI	TTAA	3 cut(s)	1227, 1523, 1690
MslI	CAYNNNNRTG	2 cut(s)	1001, 1427
Msp20I	TGGCCA	2 cut(s)	725, 1329
MspA1I	CMGCKG	3 cut(s)	77, 574, 664
MspI	CCGG	8 cut(s)	16, 187, 459, 523, 623, 644, 657, 1602
MspR9I	CCNGG	5 cut(s)	644, 719, 1331, 1518, 1603
MssI	GTTTAAAC	1 cut(s)	1524
MunI	CAATTG	1 cut(s)	810
MvaI	CCWGG	3 cut(s)	719, 1331, 1518
MvnI	CGCG	6 cut(s)	77, 110, 195, 385, 528, 944
MwoI	GCNNNNNNNGC	9 cut(s)	74, 107, 118, 382, 388, 755, 1362, 1565, 1661
NaeI	GCCGGC	1 cut(s)	17
NarI	GGCGCC	1 cut(s)	768
NciI	CCSGG	2 cut(s)	644, 1603
NcoI	CCATGG	2 cut(s)	996, 1257
NdeII	GATC	7 cut(s)	201, 243, 438, 519, 639, 1011, 1637
NgoMIV	GCCGGC	1 cut(s)	15
NlaIV	GGNNCC	6 cut(s)	81, 693, 716, 769, 821, 1335
NmeAIII	GCCGAG	2 cut(s)	267, 796
NmuCI	GTSAC	3 cut(s)	148, 229, 1408
PciSI	GCTCTTC	1 cut(s)	1610
PcsI	WCGNNNNNNNCGW	3 cut(s)	351, 366, 438
PdiI	GCCGGC	1 cut(s)	17
PdmI	GAANNNNTTC	2 cut(s)	933, 1044
PfeI	GAWTC	7 cut(s)	371, 485, 619, 741, 934, 958, 1211
PflFI	GACNNNGTC	2 cut(s)	308, 469
PinAI	ACCGGT	1 cut(s)	186
PleI	GAGTC	4 cut(s)	454, 659, 785, 1505
PluTI	GGCGCC	1 cut(s)	771
PmeI	GTTTAAAC	1 cut(s)	1524
PpsI	GAGTC	4 cut(s)	454, 659, 785, 1505
Ppu21I	YACGTR	1 cut(s)	226
PpuMI	RGGWCCY	1 cut(s)	1333
Psp124BI	GAGCTC	3 cut(s)	483, 808, 1358
Psp5II	RGGWCCY	1 cut(s)	1333
Psp6I	CCWGG	3 cut(s)	717, 1329, 1516
PspGI	CCWGG	3 cut(s)	717, 1329, 1516
PspN4I	GGNNCC	6 cut(s)	81, 693, 716, 769, 821, 1335
PspPI	GGNCC	4 cut(s)	79, 565, 659, 1333
PspPPI	RGGWCCY	1 cut(s)	1333
PstI	CTGCAG	1 cut(s)	1312
PsuI	RGATCY	2 cut(s)	201, 639
PsyI	GACNNNGTC	2 cut(s)	308, 469
RsaI	GTAC	5 cut(s)	334, 686, 965, 1194, 1435
RsaNI	GTAC	5 cut(s)	333, 685, 964, 1193, 1434
RseI	CAYNNNNRTG	2 cut(s)	1001, 1427
Rsr2I	CGGWCCG	1 cut(s)	659
RsrII	CGGWCCG	1 cut(s)	659
SacI	GAGCTC	3 cut(s)	483, 808, 1358
SacII	CCGCGG	1 cut(s)	78
SapI	GCTCTTC	1 cut(s)	1610
SaqAI	TTAA	3 cut(s)	1227, 1523, 1690
Sau3AI	GATC	7 cut(s)	201, 243, 438, 519, 639, 1011, 1637
Sau96I	GGNCC	4 cut(s)	79, 565, 659, 1333
ScaI	AGTACT	1 cut(s)	1194
SchI	GAGTC	4 cut(s)	455, 660, 785, 1505
ScrFI	CCNGG	5 cut(s)	644, 719, 1331, 1518, 1603
SduI	GDGCHC	5 cut(s)	360, 483, 808, 1270, 1358
SfaNI	GCATC	6 cut(s)	871, 929, 982, 1089, 1469, 1607
SfcI	CTRYAG	1 cut(s)	1308
SfoI	GGCGCC	1 cut(s)	769
Sfr303I	CCGCGG	1 cut(s)	78
SgrAI	CRCCGGYG	1 cut(s)	15
SgrBI	CCGCGG	1 cut(s)	78
SinI	GGWCC	3 cut(s)	79, 659, 1333
SmiMI	CAYNNNNRTG	2 cut(s)	1001, 1427
SmlI	CTYRAG	2 cut(s)	848, 1528
SmoI	CTYRAG	2 cut(s)	848, 1528
Sse9I	AATT	8 cut(s)	85, 810, 874, 1040, 1055, 1090, 1123, 1545
SspDI	GGCGCC	1 cut(s)	767
SspI	AATATT	2 cut(s)	1300, 1348
SspMI	CTAG	4 cut(s)	909, 1565, 1610, 1641
SstI	GAGCTC	3 cut(s)	483, 808, 1358
StyD4I	CCNGG	5 cut(s)	642, 717, 1329, 1516, 1601
StyI	CCWWGG	3 cut(s)	96, 996, 1257
TaaI	ACNGT	3 cut(s)	166, 609, 1438
TaiI	ACGT	4 cut(s)	212, 228, 1233, 1653
TaqII	GACCGA	1 cut(s)	582
TasI	AATT	8 cut(s)	85, 810, 874, 1040, 1055, 1090, 1123, 1545
TatI	WGTACW	2 cut(s)	684, 1192
TfiI	GAWTC	7 cut(s)	371, 485, 619, 741, 934, 958, 1211
Tru1I	TTAA	3 cut(s)	1227, 1523, 1690
Tru9I	TTAA	3 cut(s)	1227, 1523, 1690
TscAI	CASTG	4 cut(s)	614, 991, 1330, 1367
TseFI	GTSAC	3 cut(s)	148, 229, 1408
TseI	GCWGC	8 cut(s)	412, 512, 664, 839, 981, 1112, 1115, 1606
Tsp45I	GTSAC	3 cut(s)	148, 229, 1408
TspDTI	ATGAA	6 cut(s)	966, 1019, 1068, 1306, 1388, 1640
TspGWI	ACGGA	4 cut(s)	262, 690, 722, 817
TspRI	CASTG	4 cut(s)	614, 991, 1330, 1367
Tth111I	GACNNNGTC	2 cut(s)	308, 469
VpaK11BI	GGWCC	3 cut(s)	79, 659, 1333
XapI	RAATTY	4 cut(s)	85, 1040, 1055, 1090
XmnI	GAANNNNTTC	2 cut(s)	933, 1044
XspI	CTAG	4 cut(s)	909, 1565, 1610, 1641
ZrmI	AGTACT	1 cut(s)	1194

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.