Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0003985

Physical Location & Seq

Genomic Coordinates Reverse (-)

5410683 .. 5414259

Gene Structure 3577 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g09980.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGGACGTTCGCCGGCGACCCCCGCTCCCTCCCCGAGCCGGCGGCGTCGAACCAGTCAAGCAGCACCAGAGAAACCACCCCAAAGCCTCCGACGCGCTGCCGTTGCCGTTGTACTTGACGAACGGCTTGTTCTTCACGCTCTTCTTCACCGTCGCTTACTTCCTCCTCCACCGTTGGCGCGAGAAGATCCGCTCCTCCACTCCTCTCCACGTCGTCACGCTCTCCGAGATCGTCGCCCTCTTCTCCCTCTTCGCCTCCGTCATCTACCTCCTCGGCTTCTTCGGCATTGACTTCGTCCAGTCCTTCGTCCACCCCCGCGCTCCCCACGACCCCTGGAACGAAGTCGTTAGGCCGACACGTCGACAAAACGACGTCGTCAAGGGGTCGGGGTCGCGGTTAGTAATGCCTATTAATATTTCTCATCTTTCTGTTCCGGCCATGCCGGAGCAGGAGGACGAGGAGATTATTAACTCCGTAGTGTCCGGAGCGACTCCGTCGTACACTCTGGAGTCGAATCTCGGGGACTGCCGGAGAGCCACCGGCATACGGCGAGAGGCACTGCAGCGGACGACGCGTCGTTCGCTGGAGGGACTGCCTTTGGAAGGCTTCGATTACGACTCCATACTCGGACAGTGCTGCGAGATGCCGATTGGGTACGTGCAGATTCCGGTGGGAGTCGCCGGACCGCTGCTGCTCAACGGCGAGGAGCTCACTGTCCCAATGGCGACCACTGAAGGCTGCCTTGTCGCCAGCACCAACCGAGGCTGCAAGGCCATTTACGCCTCCGGCGGTGCCCACTGCGTCATTCTCAAGGACGGCATGACCAGAGCTCCGGTGGTGAGGTTCAACTCCGCCGTCAGAGCGGCCGAGCTTAAGTTCTTCCTCGAAGACCCAGAAAACTTTGATTCACTCGCCATCGTTTTCAGCAGATCGAGTAGATTTGCTAAGCTTCAGGGGATTAAATGCGCAGTTGCAGGCAAGAATCTGTACATGAGGTTTACTTGCAGCACTGGAGATGCGATGGGGATGAACATGGTCTCCAAAGGGGTCCAAAACGTCTTGGATTTCCTCCAGAGTGACTTCCCCGACATGGATGTTATCGGCATCTCCGGGAATTTCTGCTCGGACAAGAAACCGGCAGCGGTGAATTGGATAGAAGGGCGAGGTAAATCAGTGGTCTGCGAGGCTGTGATCAAGGAAGAAGTGGTGAGGAAGGTACTGAAGACCAATGTAGCTGCTCTAGTGGAGCTCAACATGCTTAAAAACCTTACCGGGTCTGCAATGGCCGGTGCGCTTGGCGGGTTCAATGCCCACGCTAGCAACATTGTCACCGCAGTGTACATAGCTACCGGCCAGGACCCTGCACAGAATGTGGAGAGCTCTCACTGCATTACATTGATGGAGGCCATAAACGATGGCAAGGACCTTCATGTCTCAGTCACCATGCCTTCCATTGAGGTGGGAACAGTTGGGGGTGGAACACAACTAGCATCACAGTCAGCATGCCTGAACTTACTGGGAGTGAAGGGTGCCAGCAAGGAGTCTCCTGGTTCAAACTCAAGGAAACTAGCCACCATTGTTGCAGGTTCTGTTCTTGCAGGAGAGCTCTCTCTCATGTCAGCCCTTGCAGCAGGTCAGCTAGTTAAGAGTCACATGAAATACAACAGGTCTAGTAAGGATGTGTCAAAACTTGCCTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004420 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005778 GO:0005783 GO:0005789 GO:0006629 GO:0006694 GO:0006720 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0009058 GO:0009987 GO:0012505 GO:0016020 GO:0016125 GO:0016126 GO:0016491 GO:0016614 GO:0016616 GO:0031090 GO:0031903 GO:0031984 GO:0042175 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098588 GO:0098805 GO:0098827 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 ko04152 ko04976 map00900 map01100 map01110 map01130 map04152 map04976

Pfam Domains

Protein Families

HMG-CoA_red

Protein Analysis

567

Amino Acids

60.96

Weight (kDa)

8.6

Isoelectric Point (pI)

45.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMG-CoA_red	PF00368	182 - 556	4.2e-148	Hydroxymethylglutaryl-coenzyme A reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003985)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76490
fragaria_vesca	FvH4_1g09980 FvH4_5g26180
malus_domestica	MD02G1108500.v1.1 MD02G1108700.v1.1 MD04G1238500.v1.1 MD08G1025200.v1.1 MD15G1227900.v1.1
prunus_persica	Prupe.7G187000_v2.0.a1 Prupe.7G187500_v2.0.a1
pyrus_communis	pycom02g08710 pycom02g08720 pycom15g20270
rosa_chinensis	RchiOBHm_Chr2g0096771 RchiOBHm_Chr7g0216871
rosa_laevigata	RLG00000002531 RLG00000016668
rosa_multiflora	Rmu_sc0000854.1_g000004 Rmu_sc0004291.1_g000010 Rmu_sc0030893.1_g000001
rosa_roxburghii	Rroxscaffold_2G00145340 Rroxscaffold_3G00242800
rosa_rugosa	Rorug02G0060600 Rorug07G0164000.1
rosa_samantha	Rh2AG107800 Rh2BG110200 Rh2CG112100 Rh2DG111500 Rh7AG303400 Rh7BG295400 Rh7CG322100
rosa_wichuraiana	Rw2G008350 Rw7G025820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1430
AatII	GACGTC	1 cut(s)	375
Acc16I	TGCGCA	1 cut(s)	967
Acc36I	ACCTGC	2 cut(s)	1574, 1622
AccB1I	GGYRCC	2 cut(s)	791, 1529
AccBSI	CCGCTC	3 cut(s)	25, 192, 863
AccI	GTMKAC	1 cut(s)	361
AccII	CGCG	5 cut(s)	95, 180, 318, 394, 574
AccIII	TCCGGA	1 cut(s)	482
AclWI	GGATC	1 cut(s)	181
AcoI	YGGCCR	4 cut(s)	435, 864, 1284, 1351
AcsI	RAATTY	1 cut(s)	1114
AcuI	CTGAAG	3 cut(s)	753, 935, 1241
AcyI	GRCGYC	2 cut(s)	45, 372
AfaI	GTAC	6 cut(s)	113, 500, 656, 989, 1218, 1340
AfiI	CCNNNNNNNGG	4 cut(s)	38, 546, 602, 1090
AflII	CTTAAG	1 cut(s)	872
AflIII	ACRYGT	2 cut(s)	356, 572
AgsI	TTSAA	3 cut(s)	847, 1306, 1554
AhdI	GACNNNNNGTC	1 cut(s)	573
AjiI	CACGTC	2 cut(s)	211, 359
AjnI	CCWGG	3 cut(s)	332, 1353, 1546
AleI	CACNNNNGTG	1 cut(s)	1334
AloI	GAACNNNNNNTCC	2 cut(s)	1022, 1054
Alw21I	GWGCWC	5 cut(s)	711, 832, 1251, 1382, 1608
Alw26I	GTCTC	3 cut(s)	1042, 1438, 1548
AlwI	GGATC	1 cut(s)	181
AlwNI	CAGNNNCTG	1 cut(s)	1589
Ama87I	CYCGRG	2 cut(s)	33, 518
Aor13HI	TCCGGA	1 cut(s)	482
AoxI	GGCC	7 cut(s)	350, 435, 771, 864, 1284, 1351, 1404
ApoI	RAATTY	1 cut(s)	1114
ArsI	GACNNNNNNTTYG	2 cut(s)	562, 594
AseI	ATTAAT	1 cut(s)	411
AspLEI	GCGC	5 cut(s)	97, 180, 320, 968, 1294
AspS9I	GGNCC	4 cut(s)	683, 1048, 1357, 1423
AsuC2I	CCSGG	2 cut(s)	1111, 1273
AsuHPI	GGTGA	6 cut(s)	139, 850, 1156, 1219, 1321, 1432
AsuNHI	GCTAGC	1 cut(s)	1316
AvaI	CYCGRG	2 cut(s)	33, 518
AvaII	GGWCC	4 cut(s)	683, 1048, 1357, 1423
BaeGI	GKGCMC	1 cut(s)	796
BanI	GGYRCC	2 cut(s)	791, 1529
BanII	GRGCYC	5 cut(s)	711, 832, 1251, 1382, 1608
BbsI	GAAGAC	2 cut(s)	894, 1229
Bbv12I	GWGCWC	5 cut(s)	711, 832, 1251, 1382, 1608
BccI	CCATC	4 cut(s)	923, 1015, 1393, 1409
BceAI	ACGGC	7 cut(s)	85, 91, 139, 563, 715, 832, 839
BcgI	CGANNNNNNTGC	2 cut(s)	274, 308
BciT130I	CCWGG	3 cut(s)	334, 1355, 1548
BclI	TGATCA	1 cut(s)	1191
BcnI	CCSGG	2 cut(s)	1111, 1273
BcoDI	GTCTC	3 cut(s)	1042, 1438, 1548
BfaI	CTAG	6 cut(s)	1241, 1317, 1487, 1568, 1640, 1671
BfmI	CTRYAG	1 cut(s)	560
BfrI	CTTAAG	1 cut(s)	872
BfuAI	ACCTGC	2 cut(s)	1574, 1622
BlpI	GCTNAGC	1 cut(s)	945
Bme1390I	CCNGG	5 cut(s)	334, 1111, 1273, 1355, 1548
Bme18I	GGWCC	4 cut(s)	683, 1048, 1357, 1423
BmeRI	GACNNNNNGTC	1 cut(s)	573
BmeT110I	CYCGRG	2 cut(s)	33, 518
BmgBI	CACGTC	2 cut(s)	211, 359
BmgT120I	GGNCC	4 cut(s)	683, 1048, 1357, 1423
BmiI	GGNNCC	4 cut(s)	793, 1049, 1359, 1531
BmrFI	CCNGG	5 cut(s)	334, 1111, 1273, 1355, 1548
BmrI	ACTGGG	1 cut(s)	1526
BmsI	GCATC	4 cut(s)	633, 1006, 1113, 1499
BmtI	GCTAGC	1 cut(s)	1320
BmuI	ACTGGG	1 cut(s)	1526
BpiI	GAAGAC	2 cut(s)	894, 1229
BpmI	CTGGAG	4 cut(s)	527, 605, 1032, 1055
Bpu1102I	GCTNAGC	1 cut(s)	945
BpuEI	CTTGAG	2 cut(s)	794, 1543
BpuMI	CCSGG	2 cut(s)	1111, 1273
BsaAI	YACGTR	1 cut(s)	658
BsaHI	GRCGYC	2 cut(s)	45, 372
BsaI	GGTCTC	1 cut(s)	1042
BsaJI	CCNNGG	3 cut(s)	271, 332, 760
BsaWI	WCCGGW	3 cut(s)	482, 667, 832
BsaXI	ACNNNNNCTCC	6 cut(s)	9, 39, 814, 844, 1022, 1052
Bsc4I	CCNNNNNNNGG	4 cut(s)	38, 546, 602, 1090
Bse118I	RCCGGY	6 cut(s)	12, 38, 539, 1135, 1286, 1349
Bse1I	ACTGG	4 cut(s)	53, 298, 1015, 1521
Bse3DI	GCAATG	1 cut(s)	1287
BseAI	TCCGGA	1 cut(s)	482
BseBI	CCWGG	3 cut(s)	334, 1355, 1548
BseDI	CCNNGG	3 cut(s)	271, 332, 760
BseGI	GGATG	3 cut(s)	1032, 1099, 1684
BseLI	CCNNNNNNNGG	4 cut(s)	38, 546, 602, 1090
BseMI	GCAATG	1 cut(s)	1287
BseMII	CTCAG	1 cut(s)	1449
BseNI	ACTGG	4 cut(s)	53, 298, 1015, 1521
BseRI	GAGGAG	6 cut(s)	155, 184, 192, 260, 473, 719
BseSI	GKGCMC	1 cut(s)	796
BseX3I	CGGCCG	1 cut(s)	864
BsgI	GTGCAG	2 cut(s)	680, 1347
Bsh1236I	CGCG	5 cut(s)	95, 180, 318, 394, 574
Bsh1285I	CGRYCG	1 cut(s)	867
BshFI	GGCC	7 cut(s)	352, 437, 773, 866, 1286, 1353, 1406
BshNI	GGYRCC	2 cut(s)	791, 1529
BsiEI	CGRYCG	1 cut(s)	867
BsiHKAI	GWGCWC	5 cut(s)	711, 832, 1251, 1382, 1608
BsiHKCI	CYCGRG	2 cut(s)	33, 518
BslFI	GGGAC	3 cut(s)	536, 603, 701
BslI	CCNNNNNNNGG	4 cut(s)	38, 546, 602, 1090
BsmAI	GTCTC	3 cut(s)	1042, 1438, 1548
BsmFI	GGGAC	3 cut(s)	536, 603, 701
BsnI	GGCC	7 cut(s)	352, 437, 773, 866, 1286, 1353, 1406
Bso31I	GGTCTC	1 cut(s)	1042
BsoBI	CYCGRG	2 cut(s)	33, 518
Bsp1286I	GDGCHC	6 cut(s)	711, 796, 832, 1251, 1382, 1608
Bsp13I	TCCGGA	1 cut(s)	482
Bsp1407I	TGTACA	2 cut(s)	987, 1338
Bsp143I	GATC	4 cut(s)	186, 228, 929, 1191
Bsp1720I	GCTNAGC	1 cut(s)	945
BspANI	GGCC	7 cut(s)	352, 437, 773, 866, 1286, 1353, 1406
BspCNI	CTCAG	1 cut(s)	1448
BspEI	TCCGGA	1 cut(s)	482
BspFNI	CGCG	5 cut(s)	95, 180, 318, 394, 574
BspLI	GGNNCC	4 cut(s)	793, 1049, 1359, 1531
BspMAI	CTGCAG	1 cut(s)	564
BspMI	ACCTGC	2 cut(s)	1574, 1622
BspOI	GCTAGC	1 cut(s)	1320
BspPI	GGATC	1 cut(s)	181
BspQI	GCTCTTC	1 cut(s)	146
BspT107I	GGYRCC	2 cut(s)	791, 1529
BspTI	CTTAAG	1 cut(s)	872
BspTNI	GGTCTC	1 cut(s)	1042
BsrBI	CCGCTC	3 cut(s)	25, 192, 863
BsrDI	GCAATG	1 cut(s)	1287
BsrFI	RCCGGY	6 cut(s)	12, 38, 539, 1135, 1286, 1349
BsrGI	TGTACA	2 cut(s)	987, 1338
BsrI	ACTGG	4 cut(s)	53, 298, 1015, 1521
BssAI	RCCGGY	6 cut(s)	12, 38, 539, 1135, 1286, 1349
BssECI	CCNNGG	3 cut(s)	271, 332, 760
BssMI	GATC	4 cut(s)	186, 228, 929, 1191
BssNI	GRCGYC	2 cut(s)	45, 372
Bst2UI	CCWGG	3 cut(s)	334, 1355, 1548
Bst4CI	ACNGT	6 cut(s)	151, 173, 633, 715, 1468, 1497
Bst6I	CTCTTC	3 cut(s)	146, 245, 254
BstACI	GRCGYC	2 cut(s)	45, 372
BstAFI	CTTAAG	1 cut(s)	872
BstAUI	TGTACA	2 cut(s)	987, 1338
BstBAI	YACGTR	1 cut(s)	658
BstC8I	GCNNGC	8 cut(s)	14, 40, 751, 976, 1318, 1504, 1534, 1696
BstDEI	CTNAG	2 cut(s)	945, 1435
BstENI	CCTNNNNNAGG	1 cut(s)	600
BstF5I	GGATG	3 cut(s)	1032, 1099, 1684
BstFNI	CGCG	5 cut(s)	95, 180, 318, 394, 574
BstHHI	GCGC	5 cut(s)	97, 180, 320, 968, 1294
BstKTI	GATC	4 cut(s)	189, 231, 932, 1194
BstMAI	GTCTC	3 cut(s)	1042, 1438, 1548
BstMBI	GATC	4 cut(s)	186, 228, 929, 1191
BstMCI	CGRYCG	1 cut(s)	867
BstNI	CCWGG	3 cut(s)	334, 1355, 1548
BstNSI	RCATGY	2 cut(s)	1258, 1506
BstSCI	CCNGG	5 cut(s)	332, 1109, 1271, 1353, 1546
BstSFI	CTRYAG	1 cut(s)	560
BstSLI	GKGCMC	1 cut(s)	796
BstUI	CGCG	5 cut(s)	95, 180, 318, 394, 574
BstV2I	GAAGAC	2 cut(s)	894, 1229
BstX2I	RGATCY	1 cut(s)	186
BstXI	CCANNNNNNTGG	1 cut(s)	1459
BstYI	RGATCY	1 cut(s)	186
BstZI	CGGCCG	1 cut(s)	864
BsuRI	GGCC	7 cut(s)	352, 437, 773, 866, 1286, 1353, 1406
BtgZI	GCGATG	1 cut(s)	1034
BtrI	CACGTC	2 cut(s)	211, 359
BtsCI	GGATG	3 cut(s)	1032, 1099, 1684
BtsI	GCAGTG	4 cut(s)	557, 796, 1341, 1384
BtsIMutI	CAGTG	9 cut(s)	557, 638, 711, 729, 796, 1008, 1179, 1341, 1384
BveI	ACCTGC	2 cut(s)	1574, 1622
Cac8I	GCNNGC	8 cut(s)	14, 40, 751, 976, 1318, 1504, 1534, 1696
CaiI	CAGNNNCTG	1 cut(s)	1589
CfoI	GCGC	5 cut(s)	97, 180, 320, 968, 1294
Cfr10I	RCCGGY	6 cut(s)	12, 38, 539, 1135, 1286, 1349
Cfr13I	GGNCC	4 cut(s)	683, 1048, 1357, 1423
CpoI	CGGWCCG	1 cut(s)	683
CseI	GACGC	5 cut(s)	34, 101, 563, 580, 790
Csp6I	GTAC	6 cut(s)	112, 499, 655, 988, 1217, 1339
CspCI	CAANNNNNGTGG	2 cut(s)	1561, 1596
CspI	CGGWCCG	1 cut(s)	683
CviQI	GTAC	6 cut(s)	112, 499, 655, 988, 1217, 1339
DdeI	CTNAG	2 cut(s)	945, 1435
DpnI	GATC	4 cut(s)	188, 230, 931, 1193
DpnII	GATC	4 cut(s)	186, 228, 929, 1191
DrdI	GACNNNNNNGTC	1 cut(s)	1430
DriI	GACNNNNNGTC	1 cut(s)	573
DseDI	GACNNNNNNGTC	1 cut(s)	1430
EaeI	YGGCCR	4 cut(s)	435, 864, 1284, 1351
EagI	CGGCCG	1 cut(s)	864
Eam1104I	CTCTTC	3 cut(s)	146, 245, 254
Eam1105I	GACNNNNNGTC	1 cut(s)	573
EarI	CTCTTC	3 cut(s)	146, 245, 254
EciI	GGCGGA	1 cut(s)	841
Ecl136II	GAGCTC	5 cut(s)	709, 830, 1249, 1380, 1606
EclXI	CGGCCG	1 cut(s)	864
Eco24I	GRGCYC	5 cut(s)	711, 832, 1251, 1382, 1608
Eco31I	GGTCTC	1 cut(s)	1042
Eco47I	GGWCC	4 cut(s)	683, 1048, 1357, 1423
Eco52I	CGGCCG	1 cut(s)	864
Eco53kI	GAGCTC	5 cut(s)	709, 830, 1249, 1380, 1606
Eco57I	CTGAAG	3 cut(s)	753, 935, 1241
Eco88I	CYCGRG	2 cut(s)	33, 518
EcoICRI	GAGCTC	5 cut(s)	709, 830, 1249, 1380, 1606
EcoNI	CCTNNNNNAGG	1 cut(s)	600
EcoO109I	RGGNCCY	2 cut(s)	1357, 1423
EcoRII	CCWGG	3 cut(s)	332, 1353, 1546
EcoT38I	GRGCYC	5 cut(s)	711, 832, 1251, 1382, 1608
FalI	AAGNNNNNCTT	2 cut(s)	726, 758
FaqI	GGGAC	3 cut(s)	536, 603, 701
FauI	CCCGC	3 cut(s)	30, 323, 1292
FbaI	TGATCA	1 cut(s)	1191
FblI	GTMKAC	1 cut(s)	361
FokI	GGATG	3 cut(s)	1039, 1106, 1691
FriOI	GRGCYC	5 cut(s)	711, 832, 1251, 1382, 1608
FspBI	CTAG	6 cut(s)	1241, 1317, 1487, 1568, 1640, 1671
FspI	TGCGCA	1 cut(s)	967
GlaI	GCGC	5 cut(s)	96, 179, 319, 967, 1293
GsuI	CTGGAG	4 cut(s)	527, 605, 1032, 1055
HaeIII	GGCC	7 cut(s)	352, 437, 773, 866, 1286, 1353, 1406
HgaI	GACGC	5 cut(s)	34, 101, 563, 580, 790
HhaI	GCGC	5 cut(s)	97, 180, 320, 968, 1294
Hin1I	GRCGYC	2 cut(s)	45, 372
Hin6I	GCGC	5 cut(s)	95, 178, 318, 966, 1292
HinP1I	GCGC	5 cut(s)	95, 178, 318, 966, 1292
HincII	GTYRAC	1 cut(s)	362
HindII	GTYRAC	1 cut(s)	362
HindIII	AAGCTT	1 cut(s)	947
HphI	GGTGA	6 cut(s)	139, 850, 1156, 1219, 1321, 1432
Hpy166II	GTNNAC	5 cut(s)	310, 362, 501, 999, 1339
Hpy188I	TCNGA	5 cut(s)	91, 226, 629, 860, 1126
Hpy188III	TCNNGA	3 cut(s)	483, 506, 1072
Hpy8I	GTNNAC	5 cut(s)	310, 362, 501, 999, 1339
HpyAV	CCTTC	8 cut(s)	313, 596, 728, 1151, 1207, 1436, 1458, 1519
HpyCH4III	ACNGT	6 cut(s)	151, 173, 633, 715, 1468, 1497
HpyCH4IV	ACGT	6 cut(s)	6, 210, 358, 372, 657, 1056
HpyF3I	CTNAG	2 cut(s)	945, 1435
HpySE526I	ACGT	6 cut(s)	6, 210, 358, 372, 657, 1056
Hsp92I	GRCGYC	2 cut(s)	45, 372
HspAI	GCGC	5 cut(s)	95, 178, 318, 966, 1292
Kpn2I	TCCGGA	1 cut(s)	482
KroI	GCCGGC	2 cut(s)	12, 38
KroNI	GCCGGC	2 cut(s)	14, 40
Ksp22I	TGATCA	1 cut(s)	1191
Kzo9I	GATC	4 cut(s)	186, 228, 929, 1191
LguI	GCTCTTC	1 cut(s)	146
LmnI	GCTCC	8 cut(s)	30, 197, 325, 445, 485, 706, 835, 1246
LweI	GCATC	4 cut(s)	633, 1006, 1113, 1499
MaeI	CTAG	6 cut(s)	1241, 1317, 1487, 1568, 1640, 1671
MaeII	ACGT	6 cut(s)	6, 210, 358, 372, 657, 1056
MaeIII	GTNAC	5 cut(s)	214, 1076, 1327, 1438, 1649
MalI	GATC	4 cut(s)	188, 230, 931, 1193
MbiI	CCGCTC	3 cut(s)	25, 192, 863
MboI	GATC	4 cut(s)	186, 228, 929, 1191
MflI	RGATCY	1 cut(s)	186
MhlI	GDGCHC	6 cut(s)	711, 796, 832, 1251, 1382, 1608
MluCI	AATT	2 cut(s)	1114, 1147
MluI	ACGCGT	1 cut(s)	572
MlyI	GAGTC	6 cut(s)	484, 518, 611, 684, 1550, 1657
MmeI	TCCRAC	1 cut(s)	114
MreI	CGCCGGCG	1 cut(s)	12
MroI	TCCGGA	1 cut(s)	482
MroNI	GCCGGC	2 cut(s)	12, 38
MseI	TTAA	6 cut(s)	411, 468, 873, 960, 1260, 1644
MslI	CAYNNNNRTG	2 cut(s)	1334, 1457
MspA1I	CMGCKG	3 cut(s)	565, 688, 1142
MspCI	CTTAAG	1 cut(s)	872
MspR9I	CCNGG	5 cut(s)	334, 1111, 1273, 1355, 1548
MvaI	CCWGG	3 cut(s)	334, 1355, 1548
MvnI	CGCG	5 cut(s)	95, 180, 318, 394, 574
NaeI	GCCGGC	2 cut(s)	14, 40
NciI	CCSGG	2 cut(s)	1111, 1273
NdeII	GATC	4 cut(s)	186, 228, 929, 1191
NgoMIV	GCCGGC	2 cut(s)	12, 38
NheI	GCTAGC	1 cut(s)	1316
NlaIV	GGNNCC	4 cut(s)	793, 1049, 1359, 1531
NmeAIII	GCCGAG	2 cut(s)	252, 892
NmuCI	GTSAC	5 cut(s)	214, 1076, 1327, 1438, 1649
NsbI	TGCGCA	1 cut(s)	967
NspI	RCATGY	2 cut(s)	1258, 1506
OliI	CACNNNNGTG	1 cut(s)	1334
PaeI	GCATGC	1 cut(s)	1506
PciSI	GCTCTTC	1 cut(s)	146
PdiI	GCCGGC	2 cut(s)	14, 40
PfeI	GAWTC	4 cut(s)	514, 664, 905, 982
PflFI	GACNNNGTC	3 cut(s)	293, 374, 493
PfoI	TCCNGGA	1 cut(s)	1109
PleI	GAGTC	6 cut(s)	484, 517, 611, 683, 1549, 1656
PpsI	GAGTC	6 cut(s)	484, 517, 611, 683, 1549, 1656
Ppu21I	YACGTR	1 cut(s)	658
PpuMI	RGGWCCY	2 cut(s)	1357, 1423
PshBI	ATTAAT	1 cut(s)	411
Psp124BI	GAGCTC	5 cut(s)	711, 832, 1251, 1382, 1608
Psp5II	RGGWCCY	2 cut(s)	1357, 1423
Psp6I	CCWGG	3 cut(s)	332, 1353, 1546
PspGI	CCWGG	3 cut(s)	332, 1353, 1546
PspN4I	GGNNCC	4 cut(s)	793, 1049, 1359, 1531
PspPI	GGNCC	4 cut(s)	683, 1048, 1357, 1423
PspPPI	RGGWCCY	2 cut(s)	1357, 1423
PstI	CTGCAG	1 cut(s)	564
PstNI	CAGNNNCTG	1 cut(s)	1589
PsuI	RGATCY	1 cut(s)	186
PsyI	GACNNNGTC	3 cut(s)	293, 374, 493
RsaI	GTAC	6 cut(s)	113, 500, 656, 989, 1218, 1340
RsaNI	GTAC	6 cut(s)	112, 499, 655, 988, 1217, 1339
RseI	CAYNNNNRTG	2 cut(s)	1334, 1457
Rsr2I	CGGWCCG	1 cut(s)	683
RsrII	CGGWCCG	1 cut(s)	683
SacI	GAGCTC	5 cut(s)	711, 832, 1251, 1382, 1608
SalI	GTCGAC	1 cut(s)	360
SapI	GCTCTTC	1 cut(s)	146
SaqAI	TTAA	6 cut(s)	411, 468, 873, 960, 1260, 1644
Sau3AI	GATC	4 cut(s)	186, 228, 929, 1191
Sau96I	GGNCC	4 cut(s)	683, 1048, 1357, 1423
SchI	GAGTC	6 cut(s)	484, 518, 611, 684, 1550, 1657
ScrFI	CCNGG	5 cut(s)	334, 1111, 1273, 1355, 1548
SduI	GDGCHC	6 cut(s)	711, 796, 832, 1251, 1382, 1608
SfaNI	GCATC	4 cut(s)	633, 1006, 1113, 1499
SfcI	CTRYAG	1 cut(s)	560
SgrAI	CRCCGGYG	1 cut(s)	12
SinI	GGWCC	4 cut(s)	683, 1048, 1357, 1423
SmiMI	CAYNNNNRTG	2 cut(s)	1334, 1457
SmlI	CTYRAG	3 cut(s)	809, 872, 1558
SmoI	CTYRAG	3 cut(s)	809, 872, 1558
SphI	GCATGC	1 cut(s)	1506
Sse9I	AATT	2 cut(s)	1114, 1147
SspI	AATATT	1 cut(s)	415
SspMI	CTAG	6 cut(s)	1241, 1317, 1487, 1568, 1640, 1671
SstI	GAGCTC	5 cut(s)	711, 832, 1251, 1382, 1608
StyD4I	CCNGG	5 cut(s)	332, 1109, 1271, 1353, 1546
TaaI	ACNGT	6 cut(s)	151, 173, 633, 715, 1468, 1497
TaiI	ACGT	6 cut(s)	9, 213, 361, 375, 660, 1059
TaqI	TCGA	6 cut(s)	48, 361, 512, 609, 885, 932
TasI	AATT	2 cut(s)	1114, 1147
TatI	WGTACW	3 cut(s)	111, 987, 1338
TauI	GCSGC	2 cut(s)	45, 866
TfiI	GAWTC	4 cut(s)	514, 664, 905, 982
Tru1I	TTAA	6 cut(s)	411, 468, 873, 960, 1260, 1644
Tru9I	TTAA	6 cut(s)	411, 468, 873, 960, 1260, 1644
TscAI	CASTG	9 cut(s)	564, 638, 718, 736, 803, 1015, 1179, 1341, 1391
TseFI	GTSAC	5 cut(s)	214, 1076, 1327, 1438, 1649
Tsp45I	GTSAC	5 cut(s)	214, 1076, 1327, 1438, 1649
TspDTI	ATGAA	3 cut(s)	1043, 1418, 1670
TspGWI	ACGGA	3 cut(s)	247, 463, 483
TspRI	CASTG	9 cut(s)	564, 638, 718, 736, 803, 1015, 1179, 1341, 1391
Tth111I	GACNNNGTC	3 cut(s)	293, 374, 493
Vha464I	CTTAAG	1 cut(s)	872
VpaK11BI	GGWCC	4 cut(s)	683, 1048, 1357, 1423
VspI	ATTAAT	1 cut(s)	411
XagI	CCTNNNNNAGG	1 cut(s)	600
XapI	RAATTY	1 cut(s)	1114
XceI	RCATGY	2 cut(s)	1258, 1506
XcmI	CCANNNNNNNNNTGG	1 cut(s)	832
XmiI	GTMKAC	1 cut(s)	361
XspI	CTAG	6 cut(s)	1241, 1317, 1487, 1568, 1640, 1671
ZraI	GACGTC	1 cut(s)	373

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.