Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0003985

Physical Location & Seq

Genomic Coordinates Forward (+)

32559196 .. 32563834

Gene Structure 4639 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G025820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGGACATCCGCCGTCGGCCCCCCAAACCGCCTCGTCCGACGGCCGTTAATGGTGGGACCCACTCGCACCAGCACCGTCGAAATGAGAAAGCTTCTACCTCTTCTTCTTCTTCTTCTTCTTCATCATCCGGAGGCGGCCCGAAAGCGTCCGACGCGCTGCCGCTGCCACTGTATTTGACGAACGCCGTCTTCTTCACTCTCTTCTTCTCCGTCGCCTACTACCTCCTCCACCGCTGGCGCGACAAGATCCGAACGTCCACGCCGCTCCACGTAGTCAACCTCTCCGAACTCGCCGCCATTGTTACCCTCATCGCCTCCTTCATCTACCTCCTCGGCTTCTTCGGCATCGACTTCGTCCAGTCCTTCATCTCACGCGCCTCCCACTACGACGACGCCTGGGACGACGACGACATCGAAGAAGAAGAAGAAGTAGTCCTCATCGACTCCTCCCGCTGCTGCCCTCCCCCGGCCAAACCCAAATTCGCCGACGCCGACCCCGCATTGTGCTCCGAGGAGGACGAGGAGATCATCCAGGCCGTTCTAAACGGCGCCGTTCCGTCTTACTCTCTCGAATCGAAGCTCGGCGACTGCAAGAGAGCGGCGGCGATTCGGCGCGAGTGGCTTCAGAGAACGACCGGGAGGTCACTGCAGGGTTTGCCTCTCGAAGGATTCGATTACGACTCCATTCTCGGGCAGTGCTGCGAGTCGCCGGTCGGATACGTGCAGATTCCGGTGGGAATTGCCGGGCCGTTGTTGCTGGACGGGTTTGAGTACATGGTGCCAATGGCGACGACGGAGGGGTGCTTGGTGGCGAGCATGAACAGAGGTTGCAAGGCCATTCACCTCTCCGGTGGGGCCGACTCCCAGGTGTATAGGGACGGCATGACCAGAGCGCCGGTGGTCAAGTTTGGCTCTGCCGTTAGAGCTTGCGAGCTCTTCTACTACTTGGAGAACCGTGTCAATTTCGATACTCTCGCCGTCGTTTTCAATAGATCAAGTCGATTTGCAAGGCTACAAAGCATATTTCCTTCGCTTTCCGGGATGACGCTGCACATAAGATTTAACTGCAGCACAGGTGATGCCATGGGGATGAATATGGTCTCCAAAGGGGTTCAGAATGTCCTTGATTTTCTGCAAAATGACTTTCCTGATATGGAGGTTATCGGCGTATCTGGAAATTTTTGTTCAGACAAGAAACCTGCTGCTGTAAACTGGATTCTAGGCCGTGGCAAATCAGTTGTTTGCGAGTCAGTAATCAAGGAAGAGGTGGTCAAAGAAGTGTTGAAAACGAGCGTGTCTAAGCTGGTACAACTCCATCTGAACAAGAACTTTGTAGGTTCTGCTATGGCCGGATCTGTTGGTGGGTATAATGCCCATGCCAGCAACATCGTATCTGCGATCTTTATAGCCACCGGCCAAGATCCTGCACAGAATGTTGAGAGTTCTCACTGTCTAACGAATATTGTATCCATCAATGACGGGAAGGACATTCATGCCTCTGTCACAATGCCTTGCATTGAGGTGGGTACAGTTGGAGGTGGGACTCAACTTGCATCTCAATCTGCTTGCTTAAATATGCTTGGTGTAAAAGGTGCAAGCCAAGGATCACCTGGATCAAACTCAAGGCGGTTGGCCACCATTATAGCCGGTTCAGTACTGGCCGGAGAACTCAGCCTCCTGTCTGCCATGGCGGCTGGTGATGTTGTCAAGAGTCACATGAAATACAATAGATCCAGCAAAGATATATCCAATGCTGCATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005783 GO:0005789 GO:0009526 GO:0009536 GO:0012505 GO:0016020 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0031984 GO:0042170 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044432 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0098827

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 ko04152 ko04976 map00900 map01100 map01110 map01130 map04152 map04976

Pfam Domains

Protein Families

HMG-CoA_red

Protein Analysis

587

Amino Acids

63.01

Weight (kDa)

6.25

Isoelectric Point (pI)

50.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMG-CoA_red	PF00368	201 - 577	5.4e-139	Hydroxymethylglutaryl-coenzyme A reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003985)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76490
fragaria_vesca	FvH4_1g09980 FvH4_5g26180
malus_domestica	MD02G1108500.v1.1 MD02G1108700.v1.1 MD04G1238500.v1.1 MD08G1025200.v1.1 MD15G1227900.v1.1
prunus_persica	Prupe.7G187000_v2.0.a1 Prupe.7G187500_v2.0.a1
pyrus_communis	pycom02g08710 pycom02g08720 pycom15g20270
rosa_chinensis	RchiOBHm_Chr2g0096771 RchiOBHm_Chr7g0216871
rosa_laevigata	RLG00000002531 RLG00000016668
rosa_multiflora	Rmu_sc0000854.1_g000004 Rmu_sc0004291.1_g000010 Rmu_sc0030893.1_g000001
rosa_roxburghii	Rroxscaffold_2G00145340 Rroxscaffold_3G00242800
rosa_rugosa	Rorug02G0060600 Rorug07G0164000.1
rosa_samantha	Rh2AG107800 Rh2BG110200 Rh2CG112100 Rh2DG111500 Rh7AG303400 Rh7BG295400 Rh7CG322100
rosa_wichuraiana	Rw2G008350 Rw7G025820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	640
Acc36I	ACCTGC	1 cut(s)	1207
AccB1I	GGYRCC	2 cut(s)	548, 778
AccBSI	CCGCTC	2 cut(s)	265, 599
AccII	CGCG	4 cut(s)	155, 240, 375, 615
AccIII	TCCGGA	1 cut(s)	128
AclWI	GGATC	6 cut(s)	241, 1360, 1415, 1612, 1621, 1725
AcoI	YGGCCR	6 cut(s)	42, 468, 1347, 1414, 1632, 1659
AcsI	RAATTY	2 cut(s)	479, 1177
AcuI	CTGAAG	1 cut(s)	608
AcyI	GRCGYC	3 cut(s)	393, 489, 549
AfaI	GTAC	4 cut(s)	773, 1308, 1528, 1656
AfiI	CCNNNNNNNGG	3 cut(s)	466, 665, 690
AgsI	TTSAA	2 cut(s)	988, 1285
AjnI	CCWGG	4 cut(s)	395, 531, 864, 1609
AjuI	GAANNNNNNNTTGG	2 cut(s)	464, 496
AloI	GAACNNNNNNTCC	2 cut(s)	1659, 1691
AluBI	AGCT	5 cut(s)	92, 580, 926, 934, 1303
AluI	AGCT	5 cut(s)	92, 580, 926, 934, 1303
Alw21I	GWGCWC	2 cut(s)	509, 936
Alw26I	GTCTC	1 cut(s)	1105
AlwI	GGATC	6 cut(s)	241, 1360, 1415, 1612, 1621, 1725
Ama87I	CYCGRG	1 cut(s)	689
Aor13HI	TCCGGA	1 cut(s)	128
ApeKI	GCWGC	9 cut(s)	157, 163, 453, 456, 699, 1048, 1068, 1202, 1754
ApoI	RAATTY	2 cut(s)	479, 1177
AspLEI	GCGC	6 cut(s)	157, 240, 377, 551, 615, 895
AspS9I	GGNCC	5 cut(s)	18, 57, 137, 746, 855
AsuC2I	CCSGG	4 cut(s)	467, 637, 745, 1039
AsuHPI	GGTGA	4 cut(s)	833, 1088, 1599, 1709
AvaI	CYCGRG	1 cut(s)	689
AvaII	GGWCC	1 cut(s)	57
BalI	TGGCCA	1 cut(s)	1634
BanI	GGYRCC	2 cut(s)	548, 778
BanII	GRGCYC	1 cut(s)	936
BbsI	GAAGAC	1 cut(s)	181
Bbv12I	GWGCWC	2 cut(s)	509, 936
BbvI	GCAGC	9 cut(s)	144, 150, 440, 443, 686, 1035, 1080, 1189, 1741
BccI	CCATC	2 cut(s)	1323, 1478
BcgI	CGANNNNNNTGC	2 cut(s)	334, 368
BciT130I	CCWGG	4 cut(s)	397, 533, 866, 1611
BciVI	GTATCC	2 cut(s)	710, 1477
BcnI	CCSGG	4 cut(s)	467, 637, 745, 1039
BcoDI	GTCTC	1 cut(s)	1105
BfaI	CTAG	1 cut(s)	1220
BfmI	CTRYAG	2 cut(s)	647, 1066
BfoI	RGCGCY	2 cut(s)	552, 896
BfuAI	ACCTGC	1 cut(s)	1207
BfuI	GTATCC	2 cut(s)	710, 1477
BglI	GCCNNNNNGGC	1 cut(s)	1691
BmcAI	AGTACT	1 cut(s)	1656
Bme1390I	CCNGG	8 cut(s)	397, 467, 533, 637, 745, 866, 1039, 1611
Bme18I	GGWCC	1 cut(s)	57
BmeT110I	CYCGRG	1 cut(s)	689
BmgT120I	GGNCC	5 cut(s)	18, 57, 137, 746, 855
BmiI	GGNNCC	6 cut(s)	20, 58, 59, 550, 780, 856
BmrFI	CCNGG	8 cut(s)	397, 467, 533, 637, 745, 866, 1039, 1611
BmsI	GCATC	3 cut(s)	354, 1069, 1562
BpiI	GAAGAC	1 cut(s)	181
BpuEI	CTTGAG	1 cut(s)	1606
BpuMI	CCSGG	4 cut(s)	467, 637, 745, 1039
BsaAI	YACGTR	2 cut(s)	271, 721
BsaHI	GRCGYC	3 cut(s)	393, 489, 549
BsaI	GGTCTC	1 cut(s)	1105
BsaJI	CCNNGG	9 cut(s)	331, 396, 465, 510, 864, 1083, 1225, 1600, 1686
BsaWI	WCCGGW	3 cut(s)	128, 730, 848
BsaXI	ACNNNNNCTCC	2 cut(s)	1659, 1689
Bsc4I	CCNNNNNNNGG	3 cut(s)	466, 665, 690
Bse118I	RCCGGY	4 cut(s)	709, 895, 1412, 1646
Bse1I	ACTGG	3 cut(s)	358, 1217, 1662
BseAI	TCCGGA	1 cut(s)	128
BseBI	CCWGG	4 cut(s)	397, 533, 866, 1611
BseDI	CCNNGG	9 cut(s)	331, 396, 465, 510, 864, 1083, 1225, 1600, 1686
BseGI	GGATG	5 cut(s)	6, 125, 528, 1047, 1095
BseLI	CCNNNNNNNGG	3 cut(s)	466, 665, 690
BseMII	CTCAG	1 cut(s)	1684
BseNI	ACTGG	3 cut(s)	358, 1217, 1662
BseRI	GAGGAG	5 cut(s)	215, 320, 436, 527, 536
BseX3I	CGGCCG	1 cut(s)	42
BseXI	GCAGC	9 cut(s)	144, 150, 440, 443, 686, 1035, 1080, 1189, 1741
BsgI	GTGCAG	3 cut(s)	743, 1034, 1410
Bsh1236I	CGCG	4 cut(s)	155, 240, 375, 615
Bsh1285I	CGRYCG	3 cut(s)	45, 636, 714
BshNI	GGYRCC	2 cut(s)	548, 778
BsiEI	CGRYCG	3 cut(s)	45, 636, 714
BsiHKAI	GWGCWC	2 cut(s)	509, 936
BsiHKCI	CYCGRG	1 cut(s)	689
BslFI	GGGAC	4 cut(s)	70, 413, 890, 1555
BslI	CCNNNNNNNGG	3 cut(s)	466, 665, 690
BsmAI	GTCTC	1 cut(s)	1105
BsmFI	GGGAC	4 cut(s)	70, 413, 890, 1555
Bso31I	GGTCTC	1 cut(s)	1105
BsoBI	CYCGRG	1 cut(s)	689
Bsp1286I	GDGCHC	2 cut(s)	509, 936
Bsp13I	TCCGGA	1 cut(s)	128
Bsp143I	GATC	9 cut(s)	246, 525, 992, 1352, 1398, 1420, 1604, 1613, 1730
Bsp19I	CCATGG	2 cut(s)	1083, 1686
BspCNI	CTCAG	1 cut(s)	1683
BspEI	TCCGGA	1 cut(s)	128
BspFNI	CGCG	4 cut(s)	155, 240, 375, 615
BspLI	GGNNCC	6 cut(s)	20, 58, 59, 550, 780, 856
BspMAI	CTGCAG	2 cut(s)	651, 1070
BspMI	ACCTGC	1 cut(s)	1207
BspPI	GGATC	6 cut(s)	241, 1360, 1415, 1612, 1621, 1725
BspQI	GCTCTTC	1 cut(s)	941
BspT107I	GGYRCC	2 cut(s)	548, 778
BspTNI	GGTCTC	1 cut(s)	1105
BsrBI	CCGCTC	2 cut(s)	265, 599
BsrFI	RCCGGY	4 cut(s)	709, 895, 1412, 1646
BsrI	ACTGG	3 cut(s)	358, 1217, 1662
BssAI	RCCGGY	4 cut(s)	709, 895, 1412, 1646
BssECI	CCNNGG	9 cut(s)	331, 396, 465, 510, 864, 1083, 1225, 1600, 1686
BssMI	GATC	9 cut(s)	246, 525, 992, 1352, 1398, 1420, 1604, 1613, 1730
BssNI	GRCGYC	3 cut(s)	393, 489, 549
BssT1I	CCWWGG	3 cut(s)	1083, 1600, 1686
Bst2UI	CCWGG	4 cut(s)	397, 533, 866, 1611
Bst4CI	ACNGT	5 cut(s)	77, 171, 956, 1451, 1531
Bst6I	CTCTTC	4 cut(s)	106, 206, 941, 1257
BstACI	GRCGYC	3 cut(s)	393, 489, 549
BstAPI	GCANNNNNTGC	1 cut(s)	655
BstBAI	YACGTR	2 cut(s)	271, 721
BstC8I	GCNNGC	7 cut(s)	236, 814, 928, 932, 1381, 1567, 1597
BstDEI	CTNAG	2 cut(s)	1299, 1670
BstDSI	CCRYGG	3 cut(s)	1083, 1225, 1686
BstENI	CCTNNNNNAGG	1 cut(s)	663
BstF5I	GGATG	5 cut(s)	6, 125, 528, 1047, 1095
BstFNI	CGCG	4 cut(s)	155, 240, 375, 615
BstH2I	RGCGCY	2 cut(s)	552, 896
BstHHI	GCGC	6 cut(s)	157, 240, 377, 551, 615, 895
BstKTI	GATC	9 cut(s)	249, 528, 995, 1355, 1401, 1423, 1607, 1616, 1733
BstMAI	GTCTC	1 cut(s)	1105
BstMBI	GATC	9 cut(s)	246, 525, 992, 1352, 1398, 1420, 1604, 1613, 1730
BstMCI	CGRYCG	3 cut(s)	45, 636, 714
BstMWI	GCNNNNNNNGC	9 cut(s)	152, 163, 342, 497, 619, 655, 754, 923, 1691
BstNI	CCWGG	4 cut(s)	397, 533, 866, 1611
BstSCI	CCNGG	8 cut(s)	395, 465, 531, 635, 743, 864, 1037, 1609
BstSFI	CTRYAG	2 cut(s)	647, 1066
BstUI	CGCG	4 cut(s)	155, 240, 375, 615
BstV1I	GCAGC	9 cut(s)	144, 150, 440, 443, 686, 1035, 1080, 1189, 1741
BstV2I	GAAGAC	1 cut(s)	181
BstX2I	RGATCY	4 cut(s)	246, 1352, 1420, 1730
BstYI	RGATCY	4 cut(s)	246, 1352, 1420, 1730
BstZI	CGGCCG	1 cut(s)	42
BsuI	GTATCC	2 cut(s)	710, 1477
BtgI	CCRYGG	3 cut(s)	1083, 1225, 1686
BtgZI	GCGATG	1 cut(s)	295
BtsCI	GGATG	5 cut(s)	6, 125, 528, 1047, 1095
BtsI	GCAGTG	2 cut(s)	644, 701
BtsIMutI	CAGTG	4 cut(s)	167, 644, 701, 1447
BveI	ACCTGC	1 cut(s)	1207
Cac8I	GCNNGC	7 cut(s)	236, 814, 928, 932, 1381, 1567, 1597
CfoI	GCGC	6 cut(s)	157, 240, 377, 551, 615, 895
Cfr10I	RCCGGY	4 cut(s)	709, 895, 1412, 1646
Cfr13I	GGNCC	5 cut(s)	18, 57, 137, 746, 855
CseI	GACGC	5 cut(s)	135, 161, 401, 497, 1054
Csp6I	GTAC	4 cut(s)	772, 1307, 1527, 1655
CspCI	CAANNNNNGTGG	2 cut(s)	156, 191
CviAII	CATG	8 cut(s)	775, 817, 883, 1084, 1376, 1493, 1687, 1717
CviQI	GTAC	4 cut(s)	772, 1307, 1527, 1655
DdeI	CTNAG	2 cut(s)	1299, 1670
DinI	GGCGCC	1 cut(s)	550
DpnI	GATC	9 cut(s)	248, 527, 994, 1354, 1400, 1422, 1606, 1615, 1732
DpnII	GATC	9 cut(s)	246, 525, 992, 1352, 1398, 1420, 1604, 1613, 1730
DrdI	GACNNNNNNGTC	1 cut(s)	640
DseDI	GACNNNNNNGTC	1 cut(s)	640
EaeI	YGGCCR	6 cut(s)	42, 468, 1347, 1414, 1632, 1659
EagI	CGGCCG	1 cut(s)	42
Eam1104I	CTCTTC	4 cut(s)	106, 206, 941, 1257
EarI	CTCTTC	4 cut(s)	106, 206, 941, 1257
Ecl136II	GAGCTC	1 cut(s)	934
EclXI	CGGCCG	1 cut(s)	42
Eco130I	CCWWGG	3 cut(s)	1083, 1600, 1686
Eco24I	GRGCYC	1 cut(s)	936
Eco31I	GGTCTC	1 cut(s)	1105
Eco47I	GGWCC	1 cut(s)	57
Eco52I	CGGCCG	1 cut(s)	42
Eco53kI	GAGCTC	1 cut(s)	934
Eco57I	CTGAAG	1 cut(s)	608
Eco88I	CYCGRG	1 cut(s)	689
EcoICRI	GAGCTC	1 cut(s)	934
EcoNI	CCTNNNNNAGG	1 cut(s)	663
EcoO109I	RGGNCCY	1 cut(s)	57
EcoRII	CCWGG	4 cut(s)	395, 531, 864, 1609
EcoT14I	CCWWGG	3 cut(s)	1083, 1600, 1686
EcoT38I	GRGCYC	1 cut(s)	936
EgeI	GGCGCC	1 cut(s)	550
EheI	GGCGCC	1 cut(s)	550
ErhI	CCWWGG	3 cut(s)	1083, 1600, 1686
FaeI	CATG	8 cut(s)	778, 820, 886, 1087, 1379, 1496, 1690, 1720
FaqI	GGGAC	4 cut(s)	70, 413, 890, 1555
FatI	CATG	8 cut(s)	774, 816, 882, 1083, 1375, 1492, 1686, 1716
FauI	CCCGC	2 cut(s)	458, 505
FokI	GGATG	4 cut(s)	112, 515, 1054, 1102
FriOI	GRGCYC	1 cut(s)	936
FspBI	CTAG	1 cut(s)	1220
GlaI	GCGC	6 cut(s)	156, 239, 376, 550, 614, 894
HaeII	RGCGCY	2 cut(s)	552, 896
HgaI	GACGC	5 cut(s)	135, 161, 401, 497, 1054
HhaI	GCGC	6 cut(s)	157, 240, 377, 551, 615, 895
Hin1I	GRCGYC	3 cut(s)	393, 489, 549
Hin1II	CATG	8 cut(s)	778, 820, 886, 1087, 1379, 1496, 1690, 1720
Hin6I	GCGC	6 cut(s)	155, 238, 375, 549, 613, 893
HinP1I	GCGC	6 cut(s)	155, 238, 375, 549, 613, 893
HincII	GTYRAC	1 cut(s)	277
HindII	GTYRAC	1 cut(s)	277
HindIII	AAGCTT	1 cut(s)	90
HphI	GGTGA	4 cut(s)	833, 1088, 1599, 1709
Hpy166II	GTNNAC	3 cut(s)	258, 277, 1210
Hpy188III	TCNNGA	7 cut(s)	129, 569, 662, 1148, 1173, 1708, 1761
Hpy8I	GTNNAC	3 cut(s)	258, 277, 1210
HpyAV	CCTTC	5 cut(s)	328, 373, 659, 1038, 1477
HpyCH4III	ACNGT	5 cut(s)	77, 171, 956, 1451, 1531
HpyCH4IV	ACGT	3 cut(s)	254, 270, 720
HpyF10VI	GCNNNNNNNGC	9 cut(s)	152, 163, 342, 497, 619, 655, 754, 923, 1691
HpyF3I	CTNAG	2 cut(s)	1299, 1670
HpySE526I	ACGT	3 cut(s)	254, 270, 720
Hsp92I	GRCGYC	3 cut(s)	393, 489, 549
Hsp92II	CATG	8 cut(s)	778, 820, 886, 1087, 1379, 1496, 1690, 1720
HspAI	GCGC	6 cut(s)	155, 238, 375, 549, 613, 893
KasI	GGCGCC	1 cut(s)	548
KflI	GGGWCCC	1 cut(s)	57
Kpn2I	TCCGGA	1 cut(s)	128
Kzo9I	GATC	9 cut(s)	246, 525, 992, 1352, 1398, 1420, 1604, 1613, 1730
LguI	GCTCTTC	1 cut(s)	941
LmnI	GCTCC	2 cut(s)	270, 512
Lsp1109I	GCAGC	9 cut(s)	144, 150, 440, 443, 686, 1035, 1080, 1189, 1741
LweI	GCATC	3 cut(s)	354, 1069, 1562
MaeI	CTAG	1 cut(s)	1220
MaeII	ACGT	3 cut(s)	254, 270, 720
MaeIII	GTNAC	4 cut(s)	301, 642, 1501, 1712
MalI	GATC	9 cut(s)	248, 527, 994, 1354, 1400, 1422, 1606, 1615, 1732
MbiI	CCGCTC	2 cut(s)	265, 599
MboI	GATC	9 cut(s)	246, 525, 992, 1352, 1398, 1420, 1604, 1613, 1730
MflI	RGATCY	4 cut(s)	246, 1352, 1420, 1730
MhlI	GDGCHC	2 cut(s)	509, 936
MlsI	TGGCCA	1 cut(s)	1634
MluCI	AATT	4 cut(s)	479, 738, 961, 1177
MluNI	TGGCCA	1 cut(s)	1634
Mly113I	GGCGCC	1 cut(s)	549
MlyI	GAGTC	7 cut(s)	437, 674, 713, 854, 1256, 1537, 1720
MmeI	TCCRAC	4 cut(s)	62, 174, 694, 1513
Mox20I	TGGCCA	1 cut(s)	1634
MroI	TCCGGA	1 cut(s)	128
MscI	TGGCCA	1 cut(s)	1634
MseI	TTAA	3 cut(s)	48, 1062, 1571
MslI	CAYNNNNRTG	2 cut(s)	1088, 1520
Msp20I	TGGCCA	1 cut(s)	1634
MspA1I	CMGCKG	3 cut(s)	163, 234, 453
MspR9I	CCNGG	8 cut(s)	397, 467, 533, 637, 745, 866, 1039, 1611
MvaI	CCWGG	4 cut(s)	397, 533, 866, 1611
MvnI	CGCG	4 cut(s)	155, 240, 375, 615
MwoI	GCNNNNNNNGC	9 cut(s)	152, 163, 342, 497, 619, 655, 754, 923, 1691
NarI	GGCGCC	1 cut(s)	549
NciI	CCSGG	4 cut(s)	467, 637, 745, 1039
NcoI	CCATGG	2 cut(s)	1083, 1686
NdeII	GATC	9 cut(s)	246, 525, 992, 1352, 1398, 1420, 1604, 1613, 1730
NlaIII	CATG	8 cut(s)	778, 820, 886, 1087, 1379, 1496, 1690, 1720
NlaIV	GGNNCC	6 cut(s)	20, 58, 59, 550, 780, 856
NmeAIII	GCCGAG	2 cut(s)	312, 561
NmuCI	GTSAC	3 cut(s)	642, 1501, 1712
PciSI	GCTCTTC	1 cut(s)	941
PcsI	WCGNNNNNNNCGW	4 cut(s)	399, 411, 489, 669
PfeI	GAWTC	5 cut(s)	572, 607, 669, 727, 1216
PflFI	GACNNNGTC	1 cut(s)	353
PfoI	TCCNGGA	1 cut(s)	1037
PleI	GAGTC	7 cut(s)	437, 674, 712, 854, 1255, 1537, 1719
PluTI	GGCGCC	1 cut(s)	552
PpsI	GAGTC	7 cut(s)	437, 674, 712, 854, 1255, 1537, 1719
Ppu21I	YACGTR	2 cut(s)	271, 721
PpuMI	RGGWCCY	1 cut(s)	57
Psp124BI	GAGCTC	1 cut(s)	936
Psp5II	RGGWCCY	1 cut(s)	57
Psp6I	CCWGG	4 cut(s)	395, 531, 864, 1609
PspGI	CCWGG	4 cut(s)	395, 531, 864, 1609
PspN4I	GGNNCC	6 cut(s)	20, 58, 59, 550, 780, 856
PspPI	GGNCC	5 cut(s)	18, 57, 137, 746, 855
PspPPI	RGGWCCY	1 cut(s)	57
PstI	CTGCAG	2 cut(s)	651, 1070
PsuI	RGATCY	4 cut(s)	246, 1352, 1420, 1730
PsyI	GACNNNGTC	1 cut(s)	353
RsaI	GTAC	4 cut(s)	773, 1308, 1528, 1656
RsaNI	GTAC	4 cut(s)	772, 1307, 1527, 1655
RseI	CAYNNNNRTG	2 cut(s)	1088, 1520
SacI	GAGCTC	1 cut(s)	936
SapI	GCTCTTC	1 cut(s)	941
SaqAI	TTAA	3 cut(s)	48, 1062, 1571
Sau3AI	GATC	9 cut(s)	246, 525, 992, 1352, 1398, 1420, 1604, 1613, 1730
Sau96I	GGNCC	5 cut(s)	18, 57, 137, 746, 855
ScaI	AGTACT	1 cut(s)	1656
SchI	GAGTC	7 cut(s)	437, 674, 713, 854, 1256, 1537, 1720
ScrFI	CCNGG	8 cut(s)	397, 467, 533, 637, 745, 866, 1039, 1611
SduI	GDGCHC	2 cut(s)	509, 936
SfaNI	GCATC	3 cut(s)	354, 1069, 1562
SfcI	CTRYAG	2 cut(s)	647, 1066
SfoI	GGCGCC	1 cut(s)	550
SgrAI	CRCCGGYG	1 cut(s)	895
SinI	GGWCC	1 cut(s)	57
SmiMI	CAYNNNNRTG	2 cut(s)	1088, 1520
SmlI	CTYRAG	1 cut(s)	1621
SmoI	CTYRAG	1 cut(s)	1621
Sse9I	AATT	4 cut(s)	479, 738, 961, 1177
SspDI	GGCGCC	1 cut(s)	548
SspI	AATATT	1 cut(s)	1462
SspMI	CTAG	1 cut(s)	1220
SstI	GAGCTC	1 cut(s)	936
StyD4I	CCNGG	8 cut(s)	395, 465, 531, 635, 743, 864, 1037, 1609
StyI	CCWWGG	3 cut(s)	1083, 1600, 1686
TaaI	ACNGT	5 cut(s)	77, 171, 956, 1451, 1531
TaiI	ACGT	3 cut(s)	257, 273, 723
TasI	AATT	4 cut(s)	479, 738, 961, 1177
TatI	WGTACW	2 cut(s)	771, 1654
TauI	GCSGC	7 cut(s)	138, 163, 265, 296, 602, 605, 1694
TfiI	GAWTC	5 cut(s)	572, 607, 669, 727, 1216
Tru1I	TTAA	3 cut(s)	48, 1062, 1571
Tru9I	TTAA	3 cut(s)	48, 1062, 1571
TscAI	CASTG	4 cut(s)	174, 651, 701, 1454
TseFI	GTSAC	3 cut(s)	642, 1501, 1712
TseI	GCWGC	9 cut(s)	157, 163, 453, 456, 699, 1048, 1068, 1202, 1754
Tsp45I	GTSAC	3 cut(s)	642, 1501, 1712
TspDTI	ATGAA	7 cut(s)	111, 310, 355, 833, 1106, 1481, 1733
TspGWI	ACGGA	3 cut(s)	199, 546, 809
TspRI	CASTG	4 cut(s)	174, 651, 701, 1454
Tth111I	GACNNNGTC	1 cut(s)	353
VpaK11BI	GGWCC	1 cut(s)	57
XagI	CCTNNNNNAGG	1 cut(s)	663
XapI	RAATTY	2 cut(s)	479, 1177
XcmI	CCANNNNNNNNNTGG	2 cut(s)	895, 1607
XspI	CTAG	1 cut(s)	1220
ZrmI	AGTACT	1 cut(s)	1656

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.