Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003985

Physical Location & Seq

Genomic Coordinates Forward (+)

4700372 .. 4702843

Gene Structure 2472 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0060600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1827 bp

ATGGCGGCTCTGAAGGAGCTACTTCCGCCAGCGAAATCAACCGCCGCCACTTATTATGACCACTCGAACGATCCGTGGTTCAAGCAGCGGTTCAGTGCAGCTGCCGAGGCCGAAAAGGCTGCTGTGGTGAAGCCCAAGCCTGTGCCTCCGTATCAGAAGCGTCAGGGTTTTGTTCCGAGGAAGGTAGAGGACTTCGGGGATGGCGGTGCGTTCCCGGAGATTCATATTGCTCAGTACCCGCTTGGCATGGGCAGGGACAAGTCGGCCAAGCCCGGGAGTAAGGTTCTTCCGGTGACTGTTGATTCGAGGGGGAACATTTCGTATGATGCTATTGTTAAGCAGAATGAGAATTCGAGGAAGATTGTGTATTCCCAGCATAAGGATATTGTGCCGAAGATTTTGAGGAATGAGGAAGATGCGATGAGTGAGGAGGAGGATGAGGAGTTGCAGAAGGAGATTGAAGAGACGACAGCAGAGACAAAAGCTGCGCTTGAGAAGATTGTGAATGTGAGATTGAGCGCTGCGCAGCCGAAGAATGTAGCCACACAGTCGTCAGATTCAAAGTTTATCAAGTATAAGCCATCTCAGAAGTCGTTGGCTTTTAATTCTGGTGCCAAGGAGAGGATTATTAGGATGGTGGAGATGCCTGTTGACCCACTTGAGCCTCCCAAGTTCAAGCATAAGCGTGTTCCAAGGGCTTCCGGGTCCCCACCTGTGCCAGTCCTGCATTCCCCTCCTCGGCCGGTATCTGTGAAAGATCAGCAGGATTGGAAGATTCCGCCTTGCATTTCAAACTGGAAGAACCCAAAAGGGTATACAATCCCATTGGACAAACGTCTGGCTGCTGATGGGAGAGGCCTCCAAGATGTTCAGATTAATGATAATTTTGCAAAGCTTTCCGAGTCTTTGTATGTAGCAGAGCAGAAGGCTAGGGACGCAGTTGAATTGAGATCTAAAGTTCAGAGGGAGATGATGCAGAAGGAGAAGGATAGGAAAGAGCAGGAGCTGCGGGCTTTAGCTCAAAAAGCTCGTTCTGAGAGAACAGGAGCTGCACCCCCAGCTTCCTTTGCAATGCCTTCTGAGAGAGCGGGCATGGATACTGATAGAAGAGGGGATTATGAGCGTCCAAGGGAAAAGGAGATGGATTACCCGAAGGAGACAAGAGAGGAGAAAGAACAGAGGTTGCAGCGGGAGAAGATCCGTGAGGAGCGACGCCGAGAGAGGGAAAGGGAGAGAAGGTTGGAAGCCAAAGATGCTGCAATGGGAAAGAAGAGTAAAATTACAAGAGATAGGGATCGTGATATAAGTGAGAAAGTCGCCCTTGGCATGGCTTCTGCAGGAGCAGCAAGAGGGGGAGAGGTTATGTATGACCAGAGGCTGTTCAACCAGGAGAAGGGAATGGACTCTGGGTTTGCTACTGATGACCAGTACAATGTTTATGACAAGGGCTTGTTCACTGCTCAGCCTACCTTGTCCACTTTATACAGGCCGAAGAAGGATACTGATGCTGAGGTGTATGGAGGGGCTGATGAGCAATTGGATAAGATTATGAAGACTGATCGCTTTAAACCTGACAAAGGATTCTCAGGAGCATCTGAGAAGGCTGGTGGTCGGAGAGATGGACCAGTTGAATTTGAGAAGGATGCTGAAGAAGCTGATCCATTTGGTCTCGATCAGTTTTTGACAGAGGTAAAGAAGGGTAAGAAGGCCATGGAAAAAGTTGGCAGAGGGGGGACAATGAAAGCAACTGCTGGGTCTTCAATGCGAGATAGCTCTGATGTGGGTTCCGGAAGAAGTCGTATTGGGTTTGAAAGGGGGGGTCGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004420 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005778 GO:0005783 GO:0005789 GO:0006629 GO:0006694 GO:0006720 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0009058 GO:0009987 GO:0012505 GO:0016020 GO:0016125 GO:0016126 GO:0016491 GO:0016614 GO:0016616 GO:0031090 GO:0031903 GO:0031984 GO:0042175 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098588 GO:0098805 GO:0098827 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 ko04152 ko04976 map00900 map01100 map01110 map01130 map04152 map04976

Pfam Domains

Protein Families

HMG-CoA_red

Protein Analysis

608

Amino Acids

68.35

Weight (kDa)

9.3

Isoelectric Point (pI)

46.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SKIP_SNW	PF02731	188 - 347	7.6e-72	SKIP/SNW domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003985)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76490
fragaria_vesca	FvH4_1g09980 FvH4_5g26180
malus_domestica	MD02G1108500.v1.1 MD02G1108700.v1.1 MD04G1238500.v1.1 MD08G1025200.v1.1 MD15G1227900.v1.1
prunus_persica	Prupe.7G187000_v2.0.a1 Prupe.7G187500_v2.0.a1
pyrus_communis	pycom02g08710 pycom02g08720 pycom15g20270
rosa_chinensis	RchiOBHm_Chr2g0096771 RchiOBHm_Chr7g0216871
rosa_laevigata	RLG00000002531 RLG00000016668
rosa_multiflora	Rmu_sc0000854.1_g000004 Rmu_sc0004291.1_g000010 Rmu_sc0030893.1_g000001
rosa_roxburghii	Rroxscaffold_2G00145340 Rroxscaffold_3G00242800
rosa_rugosa	Rorug02G0060600 Rorug07G0164000.1
rosa_samantha	Rh2AG107800 Rh2BG110200 Rh2CG112100 Rh2DG111500 Rh7AG303400 Rh7BG295400 Rh7CG322100
rosa_wichuraiana	Rw2G008350 Rw7G025820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	525
AccB1I	GGYRCC	1 cut(s)	611
AccBSI	CCGCTC	1 cut(s)	1088
AccI	GTMKAC	1 cut(s)	815
AccIII	TCCGGA	1 cut(s)	1787
AclWI	GGATC	4 cut(s)	65, 1192, 1302, 1652
AcoI	YGGCCR	2 cut(s)	264, 740
AcsI	RAATTY	2 cut(s)	349, 1631
AcuI	CTGAAG	2 cut(s)	32, 1668
AcyI	GRCGYC	1 cut(s)	1213
AfaI	GTAC	2 cut(s)	236, 1430
AfeI	AGCGCT	1 cut(s)	520
AfiI	CCNNNNNNNGG	8 cut(s)	273, 379, 621, 738, 1222, 1327, 1393, 1577
AjnI	CCWGG	1 cut(s)	1386
Alw26I	GTCTC	4 cut(s)	458, 470, 1151, 1673
AlwI	GGATC	4 cut(s)	65, 1192, 1302, 1652
AlwNI	CAGNNNCTG	3 cut(s)	1006, 1049, 1378
Ama87I	CYCGRG	1 cut(s)	272
Aor13HI	TCCGGA	1 cut(s)	1787
Aor51HI	AGCGCT	1 cut(s)	520
AoxI	GGCC	6 cut(s)	108, 264, 740, 856, 1487, 1707
ApoI	RAATTY	2 cut(s)	349, 1631
ArsI	GACNNNNNNTTYG	4 cut(s)	286, 318, 1394, 1426
AseI	ATTAAT	1 cut(s)	876
AspLEI	GCGC	3 cut(s)	490, 521, 526
AspS9I	GGNCC	2 cut(s)	705, 1622
AsuC2I	CCSGG	4 cut(s)	215, 273, 274, 703
AsuHPI	GGTGA	2 cut(s)	139, 304
AvaI	CYCGRG	1 cut(s)	272
AvaII	GGWCC	2 cut(s)	705, 1622
BanI	GGYRCC	1 cut(s)	611
BbsI	GAAGAC	2 cut(s)	1559, 1749
BbvCI	CCTCAGC	1 cut(s)	1509
BccI	CCATC	6 cut(s)	194, 589, 628, 842, 1135, 1613
BcgI	CGANNNNNNTGC	2 cut(s)	101, 135
BciT130I	CCWGG	1 cut(s)	1388
BciVI	GTATCC	2 cut(s)	1090, 1492
BcnI	CCSGG	4 cut(s)	215, 273, 274, 703
BcoDI	GTCTC	4 cut(s)	458, 470, 1151, 1673
BfaI	CTAG	1 cut(s)	930
BfmI	CTRYAG	1 cut(s)	1335
BfoI	RGCGCY	1 cut(s)	522
BfuI	GTATCC	2 cut(s)	1090, 1492
BglI	GCCNNNNNGGC	1 cut(s)	116
BglII	AGATCT	1 cut(s)	950
BlpI	GCTNAGC	1 cut(s)	1461
Bme1390I	CCNGG	5 cut(s)	215, 273, 274, 703, 1388
Bme18I	GGWCC	2 cut(s)	705, 1622
BmeT110I	CYCGRG	1 cut(s)	272
BmgT120I	GGNCC	2 cut(s)	705, 1622
BmiI	GGNNCC	4 cut(s)	613, 706, 707, 1786
BmrFI	CCNGG	5 cut(s)	215, 273, 274, 703, 1388
BmsI	GCATC	8 cut(s)	316, 406, 633, 963, 1243, 1495, 1601, 1633
BoxI	GACNNNNGTC	1 cut(s)	834
BpiI	GAAGAC	2 cut(s)	1559, 1749
Bpu10I	CCTNAGC	1 cut(s)	1509
Bpu1102I	GCTNAGC	1 cut(s)	1461
BpuEI	CTTGAG	2 cut(s)	512, 680
BpuMI	CCSGG	4 cut(s)	215, 273, 274, 703
BsaBI	GATNNNNATC	1 cut(s)	1293
BsaHI	GRCGYC	1 cut(s)	1213
BsaI	GGTCTC	1 cut(s)	1673
BsaWI	WCCGGW	2 cut(s)	289, 1787
BsaXI	ACNNNNNCTCC	2 cut(s)	1223, 1253
Bsc4I	CCNNNNNNNGG	8 cut(s)	273, 379, 621, 738, 1222, 1327, 1393, 1577
Bse118I	RCCGGY	1 cut(s)	742
Bse1I	ACTGG	4 cut(s)	719, 800, 1426, 1625
Bse3DI	GCAATG	2 cut(s)	1077, 1266
Bse8I	GATNNNNATC	1 cut(s)	1293
BseAI	TCCGGA	1 cut(s)	1787
BseBI	CCWGG	1 cut(s)	1388
BseGI	GGATG	4 cut(s)	205, 442, 639, 1648
BseJI	GATNNNNATC	1 cut(s)	1293
BseLI	CCNNNNNNNGG	8 cut(s)	273, 379, 621, 738, 1222, 1327, 1393, 1577
BseMI	GCAATG	2 cut(s)	1077, 1266
BseMII	CTCAG	8 cut(s)	245, 599, 1026, 1071, 1475, 1500, 1587, 1599
BseNI	ACTGG	4 cut(s)	719, 800, 1426, 1625
BseRI	GAGGAG	6 cut(s)	443, 446, 455, 726, 1181, 1220
BseX3I	CGGCCG	1 cut(s)	740
BseYI	CCCAGC	3 cut(s)	372, 1057, 1751
BsgI	GTGCAG	2 cut(s)	117, 1035
Bsh1285I	CGRYCG	1 cut(s)	743
BshFI	GGCC	6 cut(s)	110, 266, 742, 858, 1489, 1709
BshNI	GGYRCC	1 cut(s)	611
BsiEI	CGRYCG	1 cut(s)	743
BsiHKCI	CYCGRG	1 cut(s)	272
BsiSI	CCGG	6 cut(s)	215, 273, 290, 702, 743, 1788
BslFI	GGGAC	4 cut(s)	269, 691, 947, 1747
BslI	CCNNNNNNNGG	8 cut(s)	273, 379, 621, 738, 1222, 1327, 1393, 1577
BsmAI	GTCTC	4 cut(s)	458, 470, 1151, 1673
BsmBI	CGTCTC	1 cut(s)	458
BsmFI	GGGAC	4 cut(s)	269, 691, 947, 1747
BsmI	GAATGC	1 cut(s)	727
BsnI	GGCC	6 cut(s)	110, 266, 742, 858, 1489, 1709
Bso31I	GGTCTC	1 cut(s)	1673
BsoBI	CYCGRG	1 cut(s)	272
Bsp13I	TCCGGA	1 cut(s)	1787
Bsp143I	GATC	8 cut(s)	70, 757, 950, 1197, 1294, 1558, 1657, 1672
Bsp1720I	GCTNAGC	1 cut(s)	1461
Bsp19I	CCATGG	1 cut(s)	1710
BspANI	GGCC	6 cut(s)	110, 266, 742, 858, 1489, 1709
BspCNI	CTCAG	8 cut(s)	244, 598, 1027, 1072, 1474, 1501, 1588, 1598
BspEI	TCCGGA	1 cut(s)	1787
BspLI	GGNNCC	4 cut(s)	613, 706, 707, 1786
BspMAI	CTGCAG	1 cut(s)	1339
BspPI	GGATC	4 cut(s)	65, 1192, 1302, 1652
BspT107I	GGYRCC	1 cut(s)	611
BspTNI	GGTCTC	1 cut(s)	1673
BsrBI	CCGCTC	1 cut(s)	1088
BsrDI	GCAATG	2 cut(s)	1077, 1266
BsrFI	RCCGGY	1 cut(s)	742
BsrI	ACTGG	4 cut(s)	719, 800, 1426, 1625
BssAI	RCCGGY	1 cut(s)	742
BssMI	GATC	8 cut(s)	70, 757, 950, 1197, 1294, 1558, 1657, 1672
BssNAI	GTATAC	1 cut(s)	816
BssNI	GRCGYC	1 cut(s)	1213
BssT1I	CCWWGG	5 cut(s)	615, 692, 1127, 1321, 1710
Bst1107I	GTATAC	1 cut(s)	816
Bst2UI	CCWGG	1 cut(s)	1388
Bst4CI	ACNGT	2 cut(s)	298, 549
Bst6I	CTCTTC	3 cut(s)	456, 1102, 1265
BstACI	GRCGYC	1 cut(s)	1213
BstAPI	GCANNNNNTGC	1 cut(s)	1006
BstC8I	GCNNGC	3 cut(s)	30, 1011, 1090
BstDEI	CTNAG	8 cut(s)	231, 585, 1035, 1080, 1461, 1509, 1585, 1596
BstDSI	CCRYGG	2 cut(s)	74, 1710
BstENI	CCTNNNNNAGG	1 cut(s)	1575
BstF5I	GGATG	4 cut(s)	205, 442, 639, 1648
BstH2I	RGCGCY	1 cut(s)	522
BstHHI	GCGC	3 cut(s)	490, 521, 526
BstKTI	GATC	8 cut(s)	73, 760, 953, 1200, 1297, 1561, 1660, 1675
BstMAI	GTCTC	4 cut(s)	458, 470, 1151, 1673
BstMBI	GATC	8 cut(s)	70, 757, 950, 1197, 1294, 1558, 1657, 1672
BstMCI	CGRYCG	1 cut(s)	743
BstNI	CCWGG	1 cut(s)	1388
BstPAI	GACNNNNGTC	1 cut(s)	834
BstSCI	CCNGG	5 cut(s)	213, 271, 272, 701, 1386
BstSFI	CTRYAG	1 cut(s)	1335
BstV2I	GAAGAC	2 cut(s)	1559, 1749
BstX2I	RGATCY	2 cut(s)	950, 1197
BstYI	RGATCY	2 cut(s)	950, 1197
BstZ17I	GTATAC	1 cut(s)	816
BstZI	CGGCCG	1 cut(s)	740
BsuI	GTATCC	2 cut(s)	1090, 1492
BsuRI	GGCC	6 cut(s)	110, 266, 742, 858, 1489, 1709
BtgI	CCRYGG	2 cut(s)	74, 1710
BtgZI	GCGATG	1 cut(s)	434
BtsCI	GGATG	4 cut(s)	205, 442, 639, 1648
BtsI	GCAGTG	1 cut(s)	1455
BtsIMutI	CAGTG	2 cut(s)	100, 1455
Cac8I	GCNNGC	3 cut(s)	30, 1011, 1090
CaiI	CAGNNNCTG	3 cut(s)	1006, 1049, 1378
CfoI	GCGC	3 cut(s)	490, 521, 526
Cfr10I	RCCGGY	1 cut(s)	742
Cfr13I	GGNCC	2 cut(s)	705, 1622
Cfr9I	CCCGGG	1 cut(s)	272
CseI	GACGC	4 cut(s)	149, 944, 1112, 1221
Csp6I	GTAC	2 cut(s)	235, 1429
CviAII	CATG	4 cut(s)	247, 1093, 1327, 1711
CviQI	GTAC	2 cut(s)	235, 1429
DdeI	CTNAG	8 cut(s)	231, 585, 1035, 1080, 1461, 1509, 1585, 1596
DpnI	GATC	8 cut(s)	72, 759, 952, 1199, 1296, 1560, 1659, 1674
DpnII	GATC	8 cut(s)	70, 757, 950, 1197, 1294, 1558, 1657, 1672
DraI	TTTAAA	1 cut(s)	1567
EaeI	YGGCCR	2 cut(s)	264, 740
EagI	CGGCCG	1 cut(s)	740
Eam1104I	CTCTTC	3 cut(s)	456, 1102, 1265
EarI	CTCTTC	3 cut(s)	456, 1102, 1265
EciI	GGCGGA	2 cut(s)	15, 768
EclXI	CGGCCG	1 cut(s)	740
Eco130I	CCWWGG	5 cut(s)	615, 692, 1127, 1321, 1710
Eco147I	AGGCCT	1 cut(s)	858
Eco31I	GGTCTC	1 cut(s)	1673
Eco47I	GGWCC	2 cut(s)	705, 1622
Eco47III	AGCGCT	1 cut(s)	520
Eco52I	CGGCCG	1 cut(s)	740
Eco57I	CTGAAG	2 cut(s)	32, 1668
Eco88I	CYCGRG	1 cut(s)	272
EcoNI	CCTNNNNNAGG	1 cut(s)	1575
EcoO109I	RGGNCCY	1 cut(s)	705
EcoRI	GAATTC	1 cut(s)	349
EcoRII	CCWGG	1 cut(s)	1386
EcoT14I	CCWWGG	5 cut(s)	615, 692, 1127, 1321, 1710
ErhI	CCWWGG	5 cut(s)	615, 692, 1127, 1321, 1710
Esp3I	CGTCTC	1 cut(s)	458
FaeI	CATG	4 cut(s)	250, 1096, 1330, 1714
FalI	AAGNNNNNCTT	4 cut(s)	474, 506, 1305, 1337
FaqI	GGGAC	4 cut(s)	269, 691, 947, 1747
FatI	CATG	4 cut(s)	246, 1092, 1326, 1710
FauI	CCCGC	4 cut(s)	246, 1002, 1081, 1182
FblI	GTMKAC	1 cut(s)	815
FokI	GGATG	4 cut(s)	212, 449, 646, 1655
FspBI	CTAG	1 cut(s)	930
FspI	TGCGCA	1 cut(s)	525
GlaI	GCGC	3 cut(s)	489, 520, 525
GsaI	CCCAGC	3 cut(s)	376, 1061, 1755
HaeII	RGCGCY	1 cut(s)	522
HaeIII	GGCC	6 cut(s)	110, 266, 742, 858, 1489, 1709
HapII	CCGG	6 cut(s)	215, 273, 290, 702, 743, 1788
HgaI	GACGC	4 cut(s)	149, 944, 1112, 1221
HhaI	GCGC	3 cut(s)	490, 521, 526
Hin1I	GRCGYC	1 cut(s)	1213
Hin1II	CATG	4 cut(s)	250, 1096, 1330, 1714
Hin6I	GCGC	3 cut(s)	488, 519, 524
HinP1I	GCGC	3 cut(s)	488, 519, 524
HincII	GTYRAC	1 cut(s)	652
HindII	GTYRAC	1 cut(s)	652
HindIII	AAGCTT	1 cut(s)	893
HinfI	GANTC	7 cut(s)	220, 302, 557, 775, 902, 1403, 1581
HpaII	CCGG	6 cut(s)	215, 273, 290, 702, 743, 1788
HphI	GGTGA	2 cut(s)	139, 304
Hpy166II	GTNNAC	4 cut(s)	652, 816, 1455, 1476
Hpy188III	TCNNGA	4 cut(s)	1298, 1587, 1670, 1788
Hpy8I	GTNNAC	4 cut(s)	652, 816, 1455, 1476
Hpy99I	CGWCG	1 cut(s)	1215
HpyCH4III	ACNGT	2 cut(s)	298, 549
HpyCH4IV	ACGT	1 cut(s)	835
HpyF3I	CTNAG	8 cut(s)	231, 585, 1035, 1080, 1461, 1509, 1585, 1596
HpySE526I	ACGT	1 cut(s)	835
Hsp92I	GRCGYC	1 cut(s)	1213
Hsp92II	CATG	4 cut(s)	250, 1096, 1330, 1714
HspAI	GCGC	3 cut(s)	488, 519, 524
KflI	GGGWCCC	1 cut(s)	705
Kpn2I	TCCGGA	1 cut(s)	1787
Kzo9I	GATC	8 cut(s)	70, 757, 950, 1197, 1294, 1558, 1657, 1672
LmnI	GCTCC	6 cut(s)	16, 1003, 1046, 1207, 1340, 1589
LweI	GCATC	8 cut(s)	316, 406, 633, 963, 1243, 1495, 1601, 1633
MaeI	CTAG	1 cut(s)	930
MaeII	ACGT	1 cut(s)	835
MaeIII	GTNAC	1 cut(s)	292
MalI	GATC	8 cut(s)	72, 759, 952, 1199, 1296, 1560, 1659, 1674
MbiI	CCGCTC	1 cut(s)	1088
MboI	GATC	8 cut(s)	70, 757, 950, 1197, 1294, 1558, 1657, 1672
MfeI	CAATTG	1 cut(s)	1535
MflI	RGATCY	2 cut(s)	950, 1197
MluCI	AATT	7 cut(s)	349, 604, 883, 944, 1278, 1535, 1631
MlyI	GAGTC	2 cut(s)	911, 1397
MmeI	TCCRAC	2 cut(s)	1221, 1592
MroI	TCCGGA	1 cut(s)	1787
MseI	TTAA	4 cut(s)	336, 603, 876, 1566
MslI	CAYNNNNRTG	1 cut(s)	684
MspA1I	CMGCKG	3 cut(s)	88, 101, 1189
MspI	CCGG	6 cut(s)	215, 273, 290, 702, 743, 1788
MspR9I	CCNGG	5 cut(s)	215, 273, 274, 703, 1388
MteI	GCGCNGCGC	1 cut(s)	522
MunI	CAATTG	1 cut(s)	1535
Mva1269I	GAATGC	1 cut(s)	727
MvaI	CCWGG	1 cut(s)	1388
NciI	CCSGG	4 cut(s)	215, 273, 274, 703
NcoI	CCATGG	1 cut(s)	1710
NdeII	GATC	8 cut(s)	70, 757, 950, 1197, 1294, 1558, 1657, 1672
NlaIII	CATG	4 cut(s)	250, 1096, 1330, 1714
NlaIV	GGNNCC	4 cut(s)	613, 706, 707, 1786
NmeAIII	GCCGAG	3 cut(s)	130, 718, 1241
NmuCI	GTSAC	1 cut(s)	292
NsbI	TGCGCA	1 cut(s)	525
PceI	AGGCCT	1 cut(s)	858
PcsI	WCGNNNNNNNCGW	1 cut(s)	71
PctI	GAATGC	1 cut(s)	727
PfeI	GAWTC	5 cut(s)	220, 302, 557, 775, 1581
PfoI	TCCNGGA	1 cut(s)	213
PleI	GAGTC	2 cut(s)	910, 1397
PpsI	GAGTC	2 cut(s)	910, 1397
PpuMI	RGGWCCY	1 cut(s)	705
PshAI	GACNNNNGTC	1 cut(s)	834
PshBI	ATTAAT	1 cut(s)	876
Psp5II	RGGWCCY	1 cut(s)	705
Psp6I	CCWGG	1 cut(s)	1386
PspFI	CCCAGC	3 cut(s)	372, 1057, 1751
PspGI	CCWGG	1 cut(s)	1386
PspN4I	GGNNCC	4 cut(s)	613, 706, 707, 1786
PspPI	GGNCC	2 cut(s)	705, 1622
PspPPI	RGGWCCY	1 cut(s)	705
PstI	CTGCAG	1 cut(s)	1339
PstNI	CAGNNNCTG	3 cut(s)	1006, 1049, 1378
PsuI	RGATCY	2 cut(s)	950, 1197
PvuII	CAGCTG	1 cut(s)	101
RsaI	GTAC	2 cut(s)	236, 1430
RsaNI	GTAC	2 cut(s)	235, 1429
RseI	CAYNNNNRTG	1 cut(s)	684
SaqAI	TTAA	4 cut(s)	336, 603, 876, 1566
Sau3AI	GATC	8 cut(s)	70, 757, 950, 1197, 1294, 1558, 1657, 1672
Sau96I	GGNCC	2 cut(s)	705, 1622
SchI	GAGTC	2 cut(s)	911, 1397
ScrFI	CCNGG	5 cut(s)	215, 273, 274, 703, 1388
SfaNI	GCATC	8 cut(s)	316, 406, 633, 963, 1243, 1495, 1601, 1633
SfcI	CTRYAG	1 cut(s)	1335
SinI	GGWCC	2 cut(s)	705, 1622
SmaI	CCCGGG	1 cut(s)	274
SmiMI	CAYNNNNRTG	1 cut(s)	684
SmlI	CTYRAG	2 cut(s)	491, 659
SmoI	CTYRAG	2 cut(s)	491, 659
Sse9I	AATT	7 cut(s)	349, 604, 883, 944, 1278, 1535, 1631
SseBI	AGGCCT	1 cut(s)	858
SspMI	CTAG	1 cut(s)	930
StuI	AGGCCT	1 cut(s)	858
StyD4I	CCNGG	5 cut(s)	213, 271, 272, 701, 1386
StyI	CCWWGG	5 cut(s)	615, 692, 1127, 1321, 1710
TaaI	ACNGT	2 cut(s)	298, 549
TaiI	ACGT	1 cut(s)	838
TaqI	TCGA	4 cut(s)	65, 305, 353, 1671
TasI	AATT	7 cut(s)	349, 604, 883, 944, 1278, 1535, 1631
TatI	WGTACW	1 cut(s)	1428
TauI	GCSGC	2 cut(s)	8, 47
TfiI	GAWTC	5 cut(s)	220, 302, 557, 775, 1581
Tru1I	TTAA	4 cut(s)	336, 603, 876, 1566
Tru9I	TTAA	4 cut(s)	336, 603, 876, 1566
TscAI	CASTG	2 cut(s)	100, 1462
TseFI	GTSAC	1 cut(s)	292
Tsp45I	GTSAC	1 cut(s)	292
TspDTI	ATGAA	3 cut(s)	212, 1565, 1754
TspGWI	ACGGA	3 cut(s)	63, 138, 1190
TspMI	CCCGGG	1 cut(s)	272
TspRI	CASTG	2 cut(s)	100, 1462
VpaK11BI	GGWCC	2 cut(s)	705, 1622
VspI	ATTAAT	1 cut(s)	876
XagI	CCTNNNNNAGG	1 cut(s)	1575
XapI	RAATTY	2 cut(s)	349, 1631
XmaI	CCCGGG	1 cut(s)	272
XmiI	GTMKAC	1 cut(s)	815
XspI	CTAG	1 cut(s)	930

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.