Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003985

Physical Location & Seq

Genomic Coordinates Reverse (-)

9448529 .. 9452088

Gene Structure 3560 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ47166

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1746 bp

ATGGACGTTCGCCGGCGACCCCCACTACCTCCCCGCGCCTTCGTCGGCGAACCCATGAAGCAGCACCAGAGAAATCACCCCAAGGCGTCCGACGCGCTGCCGTTGCCGTTGTACTTGACCAACGGCTTGTTCTTCACGCTCTTCTTCTCCGTCGCTTACTTCCTCCTCCACCGCTGGCGCGAGAAGATCCGCACCTCCATTCCCCTCCACGTCGTCACGCTCTCCGAGATCGCCGCCCTCTTCTCCCTCTTCGCCTCCGTCATCTACCTCCTCGGCTTCTTCGGCATTGACTTCGTCCAGTCCTTCGTCGCCCCCCGCGCTCCCCACGACCCCTGGAACGACGTTGGAAAGGCGCGGCGGCCCCGAAACGATGTCGTAAGGACGCCACGCGTCAGAAACGACGTCGTAAAGGGGTCGCAGTTAGTGCCGCAGTGCGAGAACCAGCGCTGCGGCACTAACTCTCCTCCTCTTTCTGTTTCGGTACGGCCCGAGCAGGAGGACGAGGAGATAATTAATTCCGTAGTGTCCGGAGCGACGCCGTCGCACACTCTGGAGTCGAATCTCGGGGACTGCCGGAGAGCCGCCGCCATACGGCGGGAGGCCCTGCAGCGAAGGACGAGTCGTTCGCTGGAGGGACTCCCCTTGGAAGGCTTCGATTACGACTCTATACTCGGACAGTGCTGCGAGATGCCGATTGGGTATGTGCAGATTCCGGTGGGAGTCGCCGGACCTCTGCTGCTCGACGGCGAGGAGCTCACTATCCCAATGGCGACCACCGAGGGCTGCCTCGTCGCCAGCACCAACCGAGGCTGCAAGGCCATTTACGCTTCCGGTGGGGCCCACAGCGTCATTCTCAAGGACGGCATGACCAGAGCTCCGGTCGTGAGGTTCAACTCCGCCTTCAGAGCGGCCGAGCTCAAGTTCTTCCTGGAGGACCCGGAAAACTTCGATTCTGTTGCCATCGTTTTCAACAGATCTAGTAGATTTGCAAAGCTTCAGGACATTAAATGCGCGGTTGCAGGCAAGAATCTGTTCATGAGGTTTACATGCAGCACCGGAGATGCGATGGGGATGAACATGGTCTCCAAAGGGGTCCAAAATGTGTTGGATTTTCTCCAGAGTGACTTCCCCGACATGGATGTTATCGGCATCTCCGGGAATTTCTGCTCAGACAAGAAACCGGCAGCGGTGAATTGGATAGAAGGGCGAGGCAAATCAGTAGTGTGCGAGACTGTGATCAATGAAGAAGTGGTGAGGAAGGTACTGAAGACCAATGTAGCTGCCTTGGTGGAGCTCAACATGCTTAAAAACCTTACCGGGTCTGCAATGGCCGGTGCTCTTGGTGGGTTCAATGCCCACGCCAGCAACATTGTCAGCGCAGTGTACATAGCTACCGGCCAGGACCCTGCTCAGAATGTGGAGAGCTCTCACTGCATTACCATGATGGAGGCCATAAACGATGGAAAGGACCTACATGTCTCAGTCACCATGCCTTCCATTGAGGTGGGAACAGTTGGAGGTGGAACACAACTAGCATCGCAGTCAGCCTGCCTGAACTTACTGGGAGTTAAGGGTGCCAGCAAGGACTCTCCTGGTTCAAACTCAAGGAAACTAGCCACCATTGTTGCAGGTTCTGTTCTAGCAGGAGAGCTCTCTCTCATGTCAGCCCTTGCAGCAGGTCAGCTAGTTAACAGTCACTTGAAATACAACAGATCTAGTAAGGATGTGTCGAAACTTGCCTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004420 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005778 GO:0005783 GO:0005789 GO:0006629 GO:0006694 GO:0006720 GO:0008150 GO:0008152 GO:0008202 GO:0008299 GO:0008610 GO:0009058 GO:0009987 GO:0012505 GO:0016020 GO:0016125 GO:0016126 GO:0016491 GO:0016614 GO:0016616 GO:0031090 GO:0031903 GO:0031984 GO:0042175 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098588 GO:0098805 GO:0098827 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 ko04152 ko04976 map00900 map01100 map01110 map01130 map04152 map04976

Pfam Domains

Protein Families

HMG-CoA_red

Protein Analysis

581

Amino Acids

62.72

Weight (kDa)

8.46

Isoelectric Point (pI)

41.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMG-CoA_red	PF00368	195 - 571	3.9e-146	Hydroxymethylglutaryl-coenzyme A reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003985)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76490
fragaria_vesca	FvH4_1g09980 FvH4_5g26180
malus_domestica	MD02G1108500.v1.1 MD02G1108700.v1.1 MD04G1238500.v1.1 MD08G1025200.v1.1 MD15G1227900.v1.1
prunus_persica	Prupe.7G187000_v2.0.a1 Prupe.7G187500_v2.0.a1
pyrus_communis	pycom02g08710 pycom02g08720 pycom15g20270
rosa_chinensis	RchiOBHm_Chr2g0096771 RchiOBHm_Chr7g0216871
rosa_laevigata	RLG00000002531 RLG00000016668
rosa_multiflora	Rmu_sc0000854.1_g000004 Rmu_sc0004291.1_g000010 Rmu_sc0030893.1_g000001
rosa_roxburghii	Rroxscaffold_2G00145340 Rroxscaffold_3G00242800
rosa_rugosa	Rorug02G0060600 Rorug07G0164000.1
rosa_samantha	Rh2AG107800 Rh2BG110200 Rh2CG112100 Rh2DG111500 Rh7AG303400 Rh7BG295400 Rh7CG322100
rosa_wichuraiana	Rw2G008350 Rw7G025820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1475
AatII	GACGTC	1 cut(s)	405
Acc36I	ACCTGC	2 cut(s)	1619, 1667
AccB1I	GGYRCC	1 cut(s)	1574
AccBSI	CCGCTC	1 cut(s)	908
AccII	CGCG	7 cut(s)	36, 95, 180, 318, 355, 390, 1013
AccIII	TCCGGA	1 cut(s)	527
AclWI	GGATC	1 cut(s)	181
AcoI	YGGCCR	3 cut(s)	909, 1329, 1396
AcsI	RAATTY	1 cut(s)	1159
AcuI	CTGAAG	3 cut(s)	886, 980, 1286
AcyI	GRCGYC	4 cut(s)	86, 383, 402, 536
AfaI	GTAC	4 cut(s)	113, 483, 1263, 1385
AfeI	AGCGCT	1 cut(s)	446
AfiI	CCNNNNNNNGG	4 cut(s)	591, 594, 647, 1135
AflIII	ACRYGT	2 cut(s)	388, 1474
AgsI	TTSAA	5 cut(s)	892, 970, 1351, 1599, 1702
AjiI	CACGTC	1 cut(s)	211
AjnI	CCWGG	4 cut(s)	332, 927, 1398, 1591
AjuI	GAANNNNNNNTTGG	2 cut(s)	113, 145
AloI	GAACNNNNNNTCC	4 cut(s)	607, 639, 1067, 1099
Alw21I	GWGCWC	7 cut(s)	756, 877, 918, 1296, 1339, 1427, 1653
Alw26I	GTCTC	3 cut(s)	1087, 1223, 1483
AlwI	GGATC	1 cut(s)	181
AlwNI	CAGNNNCTG	1 cut(s)	1634
Ama87I	CYCGRG	2 cut(s)	488, 563
Aor13HI	TCCGGA	1 cut(s)	527
Aor51HI	AGCGCT	1 cut(s)	446
AoxI	GGCC	9 cut(s)	359, 485, 600, 816, 837, 909, 1329, 1396, 1449
ApaI	GGGCCC	1 cut(s)	841
ApoI	RAATTY	1 cut(s)	1159
ArsI	GACNNNNNNTTYG	4 cut(s)	604, 607, 636, 639
AseI	ATTAAT	1 cut(s)	513
Asp700I	GAANNNNTTC	1 cut(s)	1031
AspLEI	GCGC	8 cut(s)	38, 97, 180, 320, 355, 447, 1013, 1379
AsuC2I	CCSGG	3 cut(s)	938, 1156, 1318
AsuHPI	GGTGA	4 cut(s)	68, 1201, 1264, 1477
AvaI	CYCGRG	2 cut(s)	488, 563
AvaII	GGWCC	5 cut(s)	728, 934, 1093, 1402, 1468
BaeGI	GKGCMC	1 cut(s)	841
BanI	GGYRCC	1 cut(s)	1574
BanII	GRGCYC	7 cut(s)	756, 841, 877, 918, 1296, 1427, 1653
BbsI	GAAGAC	1 cut(s)	1274
Bbv12I	GWGCWC	7 cut(s)	756, 877, 918, 1296, 1339, 1427, 1653
BccI	CCATC	4 cut(s)	968, 1060, 1438, 1454
BceAI	ACGGC	8 cut(s)	85, 91, 139, 500, 523, 608, 760, 877
BcgI	CGANNNNNNTGC	4 cut(s)	274, 308, 938, 972
BciT130I	CCWGG	4 cut(s)	334, 929, 1400, 1593
BclI	TGATCA	1 cut(s)	1236
BcnI	CCSGG	3 cut(s)	938, 1156, 1318
BcoDI	GTCTC	3 cut(s)	1087, 1223, 1483
BfaI	CTAG	6 cut(s)	978, 1532, 1613, 1640, 1685, 1716
BfmI	CTRYAG	1 cut(s)	605
BfoI	RGCGCY	1 cut(s)	448
BfuAI	ACCTGC	2 cut(s)	1619, 1667
BglII	AGATCT	2 cut(s)	974, 1712
Bme1390I	CCNGG	7 cut(s)	334, 929, 938, 1156, 1318, 1400, 1593
Bme18I	GGWCC	5 cut(s)	728, 934, 1093, 1402, 1468
BmeT110I	CYCGRG	2 cut(s)	488, 563
BmgBI	CACGTC	1 cut(s)	211
BmiI	GGNNCC	7 cut(s)	362, 838, 839, 936, 1094, 1404, 1576
BmrFI	CCNGG	7 cut(s)	334, 929, 938, 1156, 1318, 1400, 1593
BmrI	ACTGGG	1 cut(s)	1571
BmsI	GCATC	4 cut(s)	678, 1051, 1158, 1544
BmuI	ACTGGG	1 cut(s)	1571
BpiI	GAAGAC	1 cut(s)	1274
BpmI	CTGGAG	4 cut(s)	572, 650, 950, 1100
BpuEI	CTTGAG	3 cut(s)	839, 902, 1588
BpuMI	CCSGG	3 cut(s)	938, 1156, 1318
BsaHI	GRCGYC	4 cut(s)	86, 383, 402, 536
BsaI	GGTCTC	1 cut(s)	1087
BsaJI	CCNNGG	7 cut(s)	81, 271, 332, 642, 777, 805, 1284
BsaWI	WCCGGW	5 cut(s)	527, 712, 830, 877, 1055
BsaXI	ACNNNNNCTCC	6 cut(s)	445, 475, 859, 889, 1067, 1097
Bsc4I	CCNNNNNNNGG	4 cut(s)	591, 594, 647, 1135
Bse118I	RCCGGY	4 cut(s)	12, 1180, 1331, 1394
Bse1I	ACTGG	2 cut(s)	298, 1566
Bse3DI	GCAATG	1 cut(s)	1332
BseAI	TCCGGA	1 cut(s)	527
BseBI	CCWGG	4 cut(s)	334, 929, 1400, 1593
BseDI	CCNNGG	7 cut(s)	81, 271, 332, 642, 777, 805, 1284
BseGI	GGATG	3 cut(s)	1077, 1144, 1729
BseLI	CCNNNNNNNGG	4 cut(s)	591, 594, 647, 1135
BseMI	GCAATG	1 cut(s)	1332
BseMII	CTCAG	3 cut(s)	1182, 1424, 1494
BseNI	ACTGG	2 cut(s)	298, 1566
BseRI	GAGGAG	6 cut(s)	155, 260, 453, 456, 518, 764
BseSI	GKGCMC	1 cut(s)	841
BseX3I	CGGCCG	1 cut(s)	909
BsgI	GTGCAG	1 cut(s)	725
Bsh1236I	CGCG	7 cut(s)	36, 95, 180, 318, 355, 390, 1013
Bsh1285I	CGRYCG	2 cut(s)	882, 912
BshFI	GGCC	9 cut(s)	361, 487, 602, 818, 839, 911, 1331, 1398, 1451
BshNI	GGYRCC	1 cut(s)	1574
BsiEI	CGRYCG	2 cut(s)	882, 912
BsiHKAI	GWGCWC	7 cut(s)	756, 877, 918, 1296, 1339, 1427, 1653
BsiHKCI	CYCGRG	2 cut(s)	488, 563
BslFI	GGGAC	2 cut(s)	581, 648
BslI	CCNNNNNNNGG	4 cut(s)	591, 594, 647, 1135
BsmAI	GTCTC	3 cut(s)	1087, 1223, 1483
BsmFI	GGGAC	2 cut(s)	581, 648
BsnI	GGCC	9 cut(s)	361, 487, 602, 818, 839, 911, 1331, 1398, 1451
Bso31I	GGTCTC	1 cut(s)	1087
BsoBI	CYCGRG	2 cut(s)	488, 563
Bsp120I	GGGCCC	1 cut(s)	837
Bsp1286I	GDGCHC	8 cut(s)	756, 841, 877, 918, 1296, 1339, 1427, 1653
Bsp13I	TCCGGA	1 cut(s)	527
Bsp1407I	TGTACA	1 cut(s)	1383
Bsp143I	GATC	5 cut(s)	186, 228, 974, 1236, 1712
BspANI	GGCC	9 cut(s)	361, 487, 602, 818, 839, 911, 1331, 1398, 1451
BspCNI	CTCAG	3 cut(s)	1181, 1423, 1493
BspEI	TCCGGA	1 cut(s)	527
BspFNI	CGCG	7 cut(s)	36, 95, 180, 318, 355, 390, 1013
BspHI	TCATGA	1 cut(s)	1035
BspLI	GGNNCC	7 cut(s)	362, 838, 839, 936, 1094, 1404, 1576
BspMAI	CTGCAG	1 cut(s)	609
BspMI	ACCTGC	2 cut(s)	1619, 1667
BspPI	GGATC	1 cut(s)	181
BspQI	GCTCTTC	1 cut(s)	146
BspT107I	GGYRCC	1 cut(s)	1574
BspTNI	GGTCTC	1 cut(s)	1087
BsrBI	CCGCTC	1 cut(s)	908
BsrDI	GCAATG	1 cut(s)	1332
BsrFI	RCCGGY	4 cut(s)	12, 1180, 1331, 1394
BsrGI	TGTACA	1 cut(s)	1383
BsrI	ACTGG	2 cut(s)	298, 1566
BssAI	RCCGGY	4 cut(s)	12, 1180, 1331, 1394
BssECI	CCNNGG	7 cut(s)	81, 271, 332, 642, 777, 805, 1284
BssMI	GATC	5 cut(s)	186, 228, 974, 1236, 1712
BssNI	GRCGYC	4 cut(s)	86, 383, 402, 536
BssT1I	CCWWGG	3 cut(s)	81, 642, 1284
Bst2UI	CCWGG	4 cut(s)	334, 929, 1400, 1593
Bst4CI	ACNGT	4 cut(s)	678, 1234, 1513, 1694
Bst6I	CTCTTC	3 cut(s)	146, 245, 254
BstACI	GRCGYC	4 cut(s)	86, 383, 402, 536
BstAPI	GCANNNNNTGC	1 cut(s)	424
BstAUI	TGTACA	1 cut(s)	1383
BstC8I	GCNNGC	8 cut(s)	14, 176, 796, 1021, 1363, 1549, 1579, 1741
BstDEI	CTNAG	3 cut(s)	1168, 1410, 1480
BstF5I	GGATG	3 cut(s)	1077, 1144, 1729
BstFNI	CGCG	7 cut(s)	36, 95, 180, 318, 355, 390, 1013
BstH2I	RGCGCY	1 cut(s)	448
BstHHI	GCGC	8 cut(s)	38, 97, 180, 320, 355, 447, 1013, 1379
BstKTI	GATC	5 cut(s)	189, 231, 977, 1239, 1715
BstMAI	GTCTC	3 cut(s)	1087, 1223, 1483
BstMBI	GATC	5 cut(s)	186, 228, 974, 1236, 1712
BstMCI	CGRYCG	2 cut(s)	882, 912
BstNI	CCWGG	4 cut(s)	334, 929, 1400, 1593
BstNSI	RCATGY	3 cut(s)	1050, 1303, 1478
BstSCI	CCNGG	7 cut(s)	332, 927, 936, 1154, 1316, 1398, 1591
BstSFI	CTRYAG	1 cut(s)	605
BstSLI	GKGCMC	1 cut(s)	841
BstUI	CGCG	7 cut(s)	36, 95, 180, 318, 355, 390, 1013
BstV2I	GAAGAC	1 cut(s)	1274
BstX2I	RGATCY	3 cut(s)	186, 974, 1712
BstXI	CCANNNNNNTGG	1 cut(s)	1504
BstYI	RGATCY	3 cut(s)	186, 974, 1712
BstZI	CGGCCG	1 cut(s)	909
BsuRI	GGCC	9 cut(s)	361, 487, 602, 818, 839, 911, 1331, 1398, 1451
BtgZI	GCGATG	2 cut(s)	1079, 1521
BtrI	CACGTC	1 cut(s)	211
BtsCI	GGATG	3 cut(s)	1077, 1144, 1729
BtsI	GCAGTG	3 cut(s)	437, 1386, 1429
BtsIMutI	CAGTG	4 cut(s)	437, 683, 1386, 1429
BveI	ACCTGC	2 cut(s)	1619, 1667
Cac8I	GCNNGC	8 cut(s)	14, 176, 796, 1021, 1363, 1549, 1579, 1741
CaiI	CAGNNNCTG	1 cut(s)	1634
CciI	TCATGA	1 cut(s)	1035
CfoI	GCGC	8 cut(s)	38, 97, 180, 320, 355, 447, 1013, 1379
Cfr10I	RCCGGY	4 cut(s)	12, 1180, 1331, 1394
CseI	GACGC	6 cut(s)	75, 101, 379, 391, 544, 835
Csp6I	GTAC	4 cut(s)	112, 482, 1262, 1384
CspCI	CAANNNNNGTGG	2 cut(s)	1606, 1641
CviQI	GTAC	4 cut(s)	112, 482, 1262, 1384
DdeI	CTNAG	3 cut(s)	1168, 1410, 1480
DpnI	GATC	5 cut(s)	188, 230, 976, 1238, 1714
DpnII	GATC	5 cut(s)	186, 228, 974, 1236, 1712
DrdI	GACNNNNNNGTC	1 cut(s)	1475
DseDI	GACNNNNNNGTC	1 cut(s)	1475
EaeI	YGGCCR	3 cut(s)	909, 1329, 1396
EagI	CGGCCG	1 cut(s)	909
Eam1104I	CTCTTC	3 cut(s)	146, 245, 254
EarI	CTCTTC	3 cut(s)	146, 245, 254
EciI	GGCGGA	1 cut(s)	886
Ecl136II	GAGCTC	6 cut(s)	754, 875, 916, 1294, 1425, 1651
EclXI	CGGCCG	1 cut(s)	909
Eco130I	CCWWGG	3 cut(s)	81, 642, 1284
Eco24I	GRGCYC	7 cut(s)	756, 841, 877, 918, 1296, 1427, 1653
Eco31I	GGTCTC	1 cut(s)	1087
Eco47I	GGWCC	5 cut(s)	728, 934, 1093, 1402, 1468
Eco47III	AGCGCT	1 cut(s)	446
Eco52I	CGGCCG	1 cut(s)	909
Eco53kI	GAGCTC	6 cut(s)	754, 875, 916, 1294, 1425, 1651
Eco57I	CTGAAG	3 cut(s)	886, 980, 1286
Eco88I	CYCGRG	2 cut(s)	488, 563
EcoICRI	GAGCTC	6 cut(s)	754, 875, 916, 1294, 1425, 1651
EcoO109I	RGGNCCY	5 cut(s)	601, 837, 934, 1402, 1468
EcoRII	CCWGG	4 cut(s)	332, 927, 1398, 1591
EcoT14I	CCWWGG	3 cut(s)	81, 642, 1284
EcoT38I	GRGCYC	7 cut(s)	756, 841, 877, 918, 1296, 1427, 1653
ErhI	CCWWGG	3 cut(s)	81, 642, 1284
FaqI	GGGAC	2 cut(s)	581, 648
FauI	CCCGC	3 cut(s)	41, 323, 588
FbaI	TGATCA	1 cut(s)	1236
FokI	GGATG	3 cut(s)	1084, 1151, 1736
FriOI	GRGCYC	7 cut(s)	756, 841, 877, 918, 1296, 1427, 1653
FspBI	CTAG	6 cut(s)	978, 1532, 1613, 1640, 1685, 1716
GlaI	GCGC	8 cut(s)	37, 96, 179, 319, 354, 446, 1012, 1378
GsuI	CTGGAG	4 cut(s)	572, 650, 950, 1100
HaeII	RGCGCY	1 cut(s)	448
HaeIII	GGCC	9 cut(s)	361, 487, 602, 818, 839, 911, 1331, 1398, 1451
HgaI	GACGC	6 cut(s)	75, 101, 379, 391, 544, 835
HhaI	GCGC	8 cut(s)	38, 97, 180, 320, 355, 447, 1013, 1379
Hin1I	GRCGYC	4 cut(s)	86, 383, 402, 536
Hin6I	GCGC	8 cut(s)	36, 95, 178, 318, 353, 445, 1011, 1377
HinP1I	GCGC	8 cut(s)	36, 95, 178, 318, 353, 445, 1011, 1377
HincII	GTYRAC	1 cut(s)	1690
HindII	GTYRAC	1 cut(s)	1690
HindIII	AAGCTT	1 cut(s)	992
HpaI	GTTAAC	1 cut(s)	1690
HphI	GGTGA	4 cut(s)	68, 1201, 1264, 1477
Hpy166II	GTNNAC	3 cut(s)	1044, 1384, 1690
Hpy188I	TCNGA	7 cut(s)	91, 226, 395, 674, 905, 1171, 1413
Hpy188III	TCNNGA	6 cut(s)	528, 551, 883, 998, 1036, 1117
Hpy8I	GTNNAC	3 cut(s)	1044, 1384, 1690
HpyAV	CCTTC	8 cut(s)	49, 313, 606, 641, 910, 1196, 1252, 1503
HpyCH4III	ACNGT	4 cut(s)	678, 1234, 1513, 1694
HpyCH4IV	ACGT	4 cut(s)	6, 210, 342, 402
HpyF3I	CTNAG	3 cut(s)	1168, 1410, 1480
HpySE526I	ACGT	4 cut(s)	6, 210, 342, 402
Hsp92I	GRCGYC	4 cut(s)	86, 383, 402, 536
HspAI	GCGC	8 cut(s)	36, 95, 178, 318, 353, 445, 1011, 1377
Kpn2I	TCCGGA	1 cut(s)	527
KroI	GCCGGC	1 cut(s)	12
KroNI	GCCGGC	1 cut(s)	14
Ksp22I	TGATCA	1 cut(s)	1236
KspAI	GTTAAC	1 cut(s)	1690
Kzo9I	GATC	5 cut(s)	186, 228, 974, 1236, 1712
LguI	GCTCTTC	1 cut(s)	146
LmnI	GCTCC	5 cut(s)	325, 530, 751, 880, 1291
LweI	GCATC	4 cut(s)	678, 1051, 1158, 1544
MaeI	CTAG	6 cut(s)	978, 1532, 1613, 1640, 1685, 1716
MaeII	ACGT	4 cut(s)	6, 210, 342, 402
MaeIII	GTNAC	4 cut(s)	214, 1121, 1483, 1694
MalI	GATC	5 cut(s)	188, 230, 976, 1238, 1714
MbiI	CCGCTC	1 cut(s)	908
MboI	GATC	5 cut(s)	186, 228, 974, 1236, 1712
MflI	RGATCY	3 cut(s)	186, 974, 1712
MhlI	GDGCHC	8 cut(s)	756, 841, 877, 918, 1296, 1339, 1427, 1653
MluCI	AATT	4 cut(s)	510, 514, 1159, 1192
MluI	ACGCGT	1 cut(s)	388
MlyI	GAGTC	6 cut(s)	563, 628, 630, 656, 729, 1580
MmeI	TCCRAC	4 cut(s)	114, 325, 1086, 1495
MreI	CGCCGGCG	1 cut(s)	12
MroI	TCCGGA	1 cut(s)	527
MroNI	GCCGGC	1 cut(s)	12
MroXI	GAANNNNTTC	1 cut(s)	1031
MseI	TTAA	5 cut(s)	513, 1005, 1305, 1569, 1689
MslI	CAYNNNNRTG	2 cut(s)	1439, 1502
MspA1I	CMGCKG	2 cut(s)	174, 1187
MspR9I	CCNGG	7 cut(s)	334, 929, 938, 1156, 1318, 1400, 1593
MvaI	CCWGG	4 cut(s)	334, 929, 1400, 1593
MvnI	CGCG	7 cut(s)	36, 95, 180, 318, 355, 390, 1013
NaeI	GCCGGC	1 cut(s)	14
NciI	CCSGG	3 cut(s)	938, 1156, 1318
NdeII	GATC	5 cut(s)	186, 228, 974, 1236, 1712
NgoMIV	GCCGGC	1 cut(s)	12
NlaIV	GGNNCC	7 cut(s)	362, 838, 839, 936, 1094, 1404, 1576
NmeAIII	GCCGAG	2 cut(s)	252, 937
NmuCI	GTSAC	4 cut(s)	214, 1121, 1483, 1694
NspI	RCATGY	3 cut(s)	1050, 1303, 1478
PagI	TCATGA	1 cut(s)	1035
PciI	ACATGT	1 cut(s)	1474
PciSI	GCTCTTC	1 cut(s)	146
PdiI	GCCGGC	1 cut(s)	14
PdmI	GAANNNNTTC	1 cut(s)	1031
PfeI	GAWTC	4 cut(s)	559, 709, 950, 1027
PflFI	GACNNNGTC	2 cut(s)	293, 538
PfoI	TCCNGGA	2 cut(s)	927, 1154
PleI	GAGTC	6 cut(s)	562, 627, 630, 656, 728, 1580
PpsI	GAGTC	6 cut(s)	562, 627, 630, 656, 728, 1580
PpuMI	RGGWCCY	3 cut(s)	934, 1402, 1468
PscI	ACATGT	1 cut(s)	1474
PshBI	ATTAAT	1 cut(s)	513
Psp124BI	GAGCTC	6 cut(s)	756, 877, 918, 1296, 1427, 1653
Psp5II	RGGWCCY	3 cut(s)	934, 1402, 1468
Psp6I	CCWGG	4 cut(s)	332, 927, 1398, 1591
PspGI	CCWGG	4 cut(s)	332, 927, 1398, 1591
PspN4I	GGNNCC	7 cut(s)	362, 838, 839, 936, 1094, 1404, 1576
PspOMI	GGGCCC	1 cut(s)	837
PspPPI	RGGWCCY	3 cut(s)	934, 1402, 1468
PstI	CTGCAG	1 cut(s)	609
PstNI	CAGNNNCTG	1 cut(s)	1634
PsuI	RGATCY	3 cut(s)	186, 974, 1712
PsyI	GACNNNGTC	2 cut(s)	293, 538
RsaI	GTAC	4 cut(s)	113, 483, 1263, 1385
RsaNI	GTAC	4 cut(s)	112, 482, 1262, 1384
RseI	CAYNNNNRTG	2 cut(s)	1439, 1502
SacI	GAGCTC	6 cut(s)	756, 877, 918, 1296, 1427, 1653
SapI	GCTCTTC	1 cut(s)	146
SaqAI	TTAA	5 cut(s)	513, 1005, 1305, 1569, 1689
Sau3AI	GATC	5 cut(s)	186, 228, 974, 1236, 1712
SchI	GAGTC	6 cut(s)	563, 628, 630, 656, 729, 1580
ScrFI	CCNGG	7 cut(s)	334, 929, 938, 1156, 1318, 1400, 1593
SduI	GDGCHC	8 cut(s)	756, 841, 877, 918, 1296, 1339, 1427, 1653
SfaNI	GCATC	4 cut(s)	678, 1051, 1158, 1544
SfcI	CTRYAG	1 cut(s)	605
SgrAI	CRCCGGYG	1 cut(s)	12
SinI	GGWCC	5 cut(s)	728, 934, 1093, 1402, 1468
SmiMI	CAYNNNNRTG	2 cut(s)	1439, 1502
SmlI	CTYRAG	3 cut(s)	854, 917, 1603
SmoI	CTYRAG	3 cut(s)	854, 917, 1603
Sse9I	AATT	4 cut(s)	510, 514, 1159, 1192
SspMI	CTAG	6 cut(s)	978, 1532, 1613, 1640, 1685, 1716
SstI	GAGCTC	6 cut(s)	756, 877, 918, 1296, 1427, 1653
StyD4I	CCNGG	7 cut(s)	332, 927, 936, 1154, 1316, 1398, 1591
StyI	CCWWGG	3 cut(s)	81, 642, 1284
TaaI	ACNGT	4 cut(s)	678, 1234, 1513, 1694
TaiI	ACGT	4 cut(s)	9, 213, 345, 405
TaqI	TCGA	5 cut(s)	557, 654, 741, 948, 1730
TasI	AATT	4 cut(s)	510, 514, 1159, 1192
TatI	WGTACW	2 cut(s)	111, 1383
TauI	GCSGC	8 cut(s)	236, 358, 361, 430, 453, 584, 587, 911
TfiI	GAWTC	4 cut(s)	559, 709, 950, 1027
Tru1I	TTAA	5 cut(s)	513, 1005, 1305, 1569, 1689
Tru9I	TTAA	5 cut(s)	513, 1005, 1305, 1569, 1689
TscAI	CASTG	4 cut(s)	437, 683, 1386, 1436
TseFI	GTSAC	4 cut(s)	214, 1121, 1483, 1694
Tsp45I	GTSAC	4 cut(s)	214, 1121, 1483, 1694
TspDTI	ATGAA	4 cut(s)	71, 1024, 1088, 1257
TspGWI	ACGGA	3 cut(s)	139, 247, 508
TspRI	CASTG	4 cut(s)	437, 683, 1386, 1436
Tth111I	GACNNNGTC	2 cut(s)	293, 538
VpaK11BI	GGWCC	5 cut(s)	728, 934, 1093, 1402, 1468
VspI	ATTAAT	1 cut(s)	513
XapI	RAATTY	1 cut(s)	1159
XceI	RCATGY	3 cut(s)	1050, 1303, 1478
XmnI	GAANNNNTTC	1 cut(s)	1031
XspI	CTAG	6 cut(s)	978, 1532, 1613, 1640, 1685, 1716
ZraI	GACGTC	1 cut(s)	403

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.