Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0003985

Physical Location & Seq

Genomic Coordinates Reverse (-)

35869367 .. 35873384

Gene Structure 4018 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002531

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1746 bp

ATGGACATCCGCCGTCGGCCCCCCAAACCGCCTCGTCCGACGGCCGTTAATGGTGGGACCCACCCGCACCAGCACCAACACCGTCGAAATGAGAAAGCATCTACCTCTTCTTCTTCTTCTTCATCATCATCCGGAGGCGGCCCGAAAGCGTCCGACGCGCTGCCGCTGCCTCTGTATTTGACGAACGCCGTCTTCTTCACTCTCTTCTTCTCCGTGGCTTACTACCTCCTTCACCGCTGGCGCGACAAGATCCGAACCTCCACGCCGCTCCACGTCGTCAACCTCTCCGAACTCGCCGCCATTGTTACCCTCATCGCCTCCTTCATCTACCTCCTTGGCTTCTTCGGCATCGACTTCGTCCAGTCCTTCATCTCACGCGCCTCCCACTACGACGACGACATCGAAGAAGAAGATGACGTCCTCTTCCATTCCCGCTGCTGCCCTCCCCCGGCCAAATCCAAATTCGCAGACGCCGAACCAGCACTGTGCTCCGAGGAGGACGAGGACATCATCCAGGCCGTTCTAAACGGCGCCGTTCCGTCTTACTCTCTCGAATCGAAGCTCGGCGACTGCAAGAGAGCGGCGGCGATTCGGCGCGAGTGGCTTCAGAGGACGACCGGGAGGTCACTGCAGGGTTTGCCTCTCGACGGATTCGATTACGACTCCATTCTCGGGCAGTGCTGCGAGTCGCCGGTCGGATACGTGCAGATTCCGGTGGGAATTGCCGGGCCGTTGTTGCTGGACGGGTTTGAGTACATGGTGCCAATGGCGACGACGGAGGGGTGCTTGGTGGCGAGCATGAACAGAGGTTGCAAGGCCATTCACCTCTCCGGTGGGGCCGACTCCCAGGTGTATAGGGACGGCATGACCAGAGCGCCGGTGGTCAAGTTTGGCTCTGCCGTAAGAGCTTGCGAGCTCTTTTACTACTTGGAGAACCGTGTCAATTTCGACACTCTCGCCGTCGTTTTCAATAGATCAAGTCGATTTGCGAGGCTACAAAGCATATTTCCTTCGCTTTCTGGGATGACGCTGCACATAAGATTTAACTGCAGCACAGGTGATGCCATGGGGATGAACATGGTCTCCAAAGGTGTTCAGAATGTTCTTGATTATCTGCAAAACGACTTTCCTGATATGGAGGTTATCGGCATATCTGGCAATTTTTGTTCAGACAAGAAACCTGCTGCTGTAAACTGGATTCTAGGCCGTGGCAAATCAGTTGTTTGCGAGTCAGTAATCAAGGAAGAGGTGGTCAAAGAAGTGTTGAAAACAAGCGTGTCTAAGCTGGTACAACTCCATCTGAACAAGAACTTTGTAGGTTCTGCTATGGCCGGATCTGTTGGTGGGTATAATGCCCATGCCAGCAACATCGTATCTGCGATCTTTATAGCCACCGGCCAAGATCCTGCACAGAATGTTGAGAGTTCTCACTGTCTAACGAATATTGTATCCATCAATGATGGGAAGGACATTCATGCTTCTGTCACAATGCCTTGCATTGAGGTGGGTACAGTTGGAGGTGGGACTCAACTTGCATCTCAATCTGCTTGCTTAAATATGCTTGGTGTAAAAGGTACAAGCCAAGGATCACCTGGATCAAACTCAAGGCGGTTGGCCACCATTATAGCCGGTTCAGTACTGGCCGGAGAACTCAGCCTCCTGTCTGCCATGGCGGCTGGTGATGTTGTCAAGAGTCACATGAAATACAACAGATCCAGCAAAGATATATCCAATGCTGCATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005783 GO:0005789 GO:0009526 GO:0009536 GO:0012505 GO:0016020 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0031984 GO:0042170 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044432 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0098827

KEGG Pathways

Metabolic & Signaling

ko00900 ko01100 ko01110 ko01130 ko04152 ko04976 map00900 map01100 map01110 map01130 map04152 map04976

Pfam Domains

Protein Families

HMG-CoA_red

Protein Analysis

582

Amino Acids

62.47

Weight (kDa)

6.93

Isoelectric Point (pI)

49.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMG-CoA_red	PF00368	195 - 571	6.3e-139	Hydroxymethylglutaryl-coenzyme A reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003985)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76490
fragaria_vesca	FvH4_1g09980 FvH4_5g26180
malus_domestica	MD02G1108500.v1.1 MD02G1108700.v1.1 MD04G1238500.v1.1 MD08G1025200.v1.1 MD15G1227900.v1.1
prunus_persica	Prupe.7G187000_v2.0.a1 Prupe.7G187500_v2.0.a1
pyrus_communis	pycom02g08710 pycom02g08720 pycom15g20270
rosa_chinensis	RchiOBHm_Chr2g0096771 RchiOBHm_Chr7g0216871
rosa_laevigata	RLG00000002531 RLG00000016668
rosa_multiflora	Rmu_sc0000854.1_g000004 Rmu_sc0004291.1_g000010 Rmu_sc0030893.1_g000001
rosa_roxburghii	Rroxscaffold_2G00145340 Rroxscaffold_3G00242800
rosa_rugosa	Rorug02G0060600 Rorug07G0164000.1
rosa_samantha	Rh2AG107800 Rh2BG110200 Rh2CG112100 Rh2DG111500 Rh7AG303400 Rh7BG295400 Rh7CG322100
rosa_wichuraiana	Rw2G008350 Rw7G025820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	622
AatII	GACGTC	1 cut(s)	420
Acc36I	ACCTGC	1 cut(s)	1189
AccB1I	GGYRCC	2 cut(s)	530, 760
AccBSI	CCGCTC	2 cut(s)	268, 581
AccII	CGCG	4 cut(s)	158, 243, 378, 597
AccIII	TCCGGA	1 cut(s)	131
AclWI	GGATC	6 cut(s)	244, 1342, 1397, 1594, 1603, 1707
AcoI	YGGCCR	6 cut(s)	42, 450, 1329, 1396, 1614, 1641
AcsI	RAATTY	1 cut(s)	461
AcuI	CTGAAG	1 cut(s)	590
AcyI	GRCGYC	3 cut(s)	417, 471, 531
AfaI	GTAC	5 cut(s)	755, 1290, 1510, 1576, 1638
AfiI	CCNNNNNNNGG	3 cut(s)	448, 647, 672
AgsI	TTSAA	2 cut(s)	970, 1267
AjiI	CACGTC	1 cut(s)	274
AjnI	CCWGG	3 cut(s)	513, 846, 1591
AjuI	GAANNNNNNNTTGG	2 cut(s)	446, 478
AloI	GAACNNNNNNTCC	4 cut(s)	1067, 1099, 1641, 1673
AluBI	AGCT	4 cut(s)	562, 908, 916, 1285
AluI	AGCT	4 cut(s)	562, 908, 916, 1285
Alw21I	GWGCWC	2 cut(s)	491, 918
Alw26I	GTCTC	1 cut(s)	1087
AlwI	GGATC	6 cut(s)	244, 1342, 1397, 1594, 1603, 1707
Ama87I	CYCGRG	1 cut(s)	671
Aor13HI	TCCGGA	1 cut(s)	131
ApeKI	GCWGC	9 cut(s)	160, 166, 435, 438, 681, 1030, 1050, 1184, 1736
ApoI	RAATTY	1 cut(s)	461
AspLEI	GCGC	6 cut(s)	160, 243, 380, 533, 597, 877
AspS9I	GGNCC	5 cut(s)	18, 57, 140, 728, 837
AsuC2I	CCSGG	3 cut(s)	449, 619, 727
AsuHPI	GGTGA	5 cut(s)	224, 815, 1070, 1581, 1691
AvaI	CYCGRG	1 cut(s)	671
AvaII	GGWCC	1 cut(s)	57
BalI	TGGCCA	1 cut(s)	1616
BanI	GGYRCC	2 cut(s)	530, 760
BanII	GRGCYC	1 cut(s)	918
BbsI	GAAGAC	1 cut(s)	184
Bbv12I	GWGCWC	2 cut(s)	491, 918
BbvI	GCAGC	9 cut(s)	147, 153, 422, 425, 668, 1017, 1062, 1171, 1723
BccI	CCATC	3 cut(s)	1305, 1454, 1460
BcgI	CGANNNNNNTGC	2 cut(s)	337, 371
BciT130I	CCWGG	3 cut(s)	515, 848, 1593
BciVI	GTATCC	2 cut(s)	692, 1459
BcnI	CCSGG	3 cut(s)	449, 619, 727
BcoDI	GTCTC	1 cut(s)	1087
BfaI	CTAG	1 cut(s)	1202
BfmI	CTRYAG	2 cut(s)	629, 1048
BfoI	RGCGCY	2 cut(s)	534, 878
BfuAI	ACCTGC	1 cut(s)	1189
BfuI	GTATCC	2 cut(s)	692, 1459
BglI	GCCNNNNNGGC	1 cut(s)	1673
BmcAI	AGTACT	1 cut(s)	1638
Bme1390I	CCNGG	6 cut(s)	449, 515, 619, 727, 848, 1593
Bme18I	GGWCC	1 cut(s)	57
BmeT110I	CYCGRG	1 cut(s)	671
BmgBI	CACGTC	1 cut(s)	274
BmgT120I	GGNCC	5 cut(s)	18, 57, 140, 728, 837
BmiI	GGNNCC	6 cut(s)	20, 58, 59, 532, 762, 838
BmrFI	CCNGG	6 cut(s)	449, 515, 619, 727, 848, 1593
BmsI	GCATC	4 cut(s)	107, 357, 1051, 1544
BpiI	GAAGAC	1 cut(s)	184
BpuEI	CTTGAG	1 cut(s)	1588
BpuMI	CCSGG	3 cut(s)	449, 619, 727
BsaAI	YACGTR	1 cut(s)	703
BsaHI	GRCGYC	3 cut(s)	417, 471, 531
BsaI	GGTCTC	1 cut(s)	1087
BsaJI	CCNNGG	9 cut(s)	213, 334, 447, 492, 846, 1065, 1207, 1582, 1668
BsaWI	WCCGGW	3 cut(s)	131, 712, 830
BsaXI	ACNNNNNCTCC	4 cut(s)	1067, 1097, 1641, 1671
Bsc4I	CCNNNNNNNGG	3 cut(s)	448, 647, 672
Bse118I	RCCGGY	4 cut(s)	691, 877, 1394, 1628
Bse1I	ACTGG	3 cut(s)	361, 1199, 1644
BseAI	TCCGGA	1 cut(s)	131
BseBI	CCWGG	3 cut(s)	515, 848, 1593
BseDI	CCNNGG	9 cut(s)	213, 334, 447, 492, 846, 1065, 1207, 1582, 1668
BseGI	GGATG	5 cut(s)	6, 128, 510, 1029, 1077
BseLI	CCNNNNNNNGG	3 cut(s)	448, 647, 672
BseMII	CTCAG	1 cut(s)	1666
BseNI	ACTGG	3 cut(s)	361, 1199, 1644
BseRI	GAGGAG	1 cut(s)	509
BseX3I	CGGCCG	1 cut(s)	42
BseXI	GCAGC	9 cut(s)	147, 153, 422, 425, 668, 1017, 1062, 1171, 1723
BsgI	GTGCAG	3 cut(s)	725, 1016, 1392
Bsh1236I	CGCG	4 cut(s)	158, 243, 378, 597
Bsh1285I	CGRYCG	3 cut(s)	45, 618, 696
BshNI	GGYRCC	2 cut(s)	530, 760
BsiEI	CGRYCG	3 cut(s)	45, 618, 696
BsiHKAI	GWGCWC	2 cut(s)	491, 918
BsiHKCI	CYCGRG	1 cut(s)	671
BslFI	GGGAC	3 cut(s)	70, 872, 1537
BslI	CCNNNNNNNGG	3 cut(s)	448, 647, 672
BsmAI	GTCTC	1 cut(s)	1087
BsmFI	GGGAC	3 cut(s)	70, 872, 1537
Bso31I	GGTCTC	1 cut(s)	1087
BsoBI	CYCGRG	1 cut(s)	671
Bsp1286I	GDGCHC	2 cut(s)	491, 918
Bsp13I	TCCGGA	1 cut(s)	131
Bsp143I	GATC	8 cut(s)	249, 974, 1334, 1380, 1402, 1586, 1595, 1712
Bsp19I	CCATGG	2 cut(s)	1065, 1668
BspCNI	CTCAG	1 cut(s)	1665
BspEI	TCCGGA	1 cut(s)	131
BspFNI	CGCG	4 cut(s)	158, 243, 378, 597
BspLI	GGNNCC	6 cut(s)	20, 58, 59, 532, 762, 838
BspMAI	CTGCAG	2 cut(s)	633, 1052
BspMI	ACCTGC	1 cut(s)	1189
BspPI	GGATC	6 cut(s)	244, 1342, 1397, 1594, 1603, 1707
BspT107I	GGYRCC	2 cut(s)	530, 760
BspTNI	GGTCTC	1 cut(s)	1087
BsrBI	CCGCTC	2 cut(s)	268, 581
BsrFI	RCCGGY	4 cut(s)	691, 877, 1394, 1628
BsrI	ACTGG	3 cut(s)	361, 1199, 1644
BssAI	RCCGGY	4 cut(s)	691, 877, 1394, 1628
BssECI	CCNNGG	9 cut(s)	213, 334, 447, 492, 846, 1065, 1207, 1582, 1668
BssMI	GATC	8 cut(s)	249, 974, 1334, 1380, 1402, 1586, 1595, 1712
BssNI	GRCGYC	3 cut(s)	417, 471, 531
BssT1I	CCWWGG	4 cut(s)	334, 1065, 1582, 1668
Bst2UI	CCWGG	3 cut(s)	515, 848, 1593
Bst4CI	ACNGT	5 cut(s)	83, 486, 938, 1433, 1513
Bst6I	CTCTTC	4 cut(s)	112, 209, 428, 1239
BstACI	GRCGYC	3 cut(s)	417, 471, 531
BstAPI	GCANNNNNTGC	1 cut(s)	637
BstBAI	YACGTR	1 cut(s)	703
BstC8I	GCNNGC	6 cut(s)	239, 796, 910, 914, 1363, 1549
BstDEI	CTNAG	2 cut(s)	1281, 1652
BstDSI	CCRYGG	4 cut(s)	213, 1065, 1207, 1668
BstF5I	GGATG	5 cut(s)	6, 128, 510, 1029, 1077
BstFNI	CGCG	4 cut(s)	158, 243, 378, 597
BstH2I	RGCGCY	2 cut(s)	534, 878
BstHHI	GCGC	6 cut(s)	160, 243, 380, 533, 597, 877
BstKTI	GATC	8 cut(s)	252, 977, 1337, 1383, 1405, 1589, 1598, 1715
BstMAI	GTCTC	1 cut(s)	1087
BstMBI	GATC	8 cut(s)	249, 974, 1334, 1380, 1402, 1586, 1595, 1712
BstMCI	CGRYCG	3 cut(s)	45, 618, 696
BstNI	CCWGG	3 cut(s)	515, 848, 1593
BstSCI	CCNGG	6 cut(s)	447, 513, 617, 725, 846, 1591
BstSFI	CTRYAG	2 cut(s)	629, 1048
BstUI	CGCG	4 cut(s)	158, 243, 378, 597
BstV1I	GCAGC	9 cut(s)	147, 153, 422, 425, 668, 1017, 1062, 1171, 1723
BstV2I	GAAGAC	1 cut(s)	184
BstX2I	RGATCY	4 cut(s)	249, 1334, 1402, 1712
BstYI	RGATCY	4 cut(s)	249, 1334, 1402, 1712
BstZI	CGGCCG	1 cut(s)	42
BsuI	GTATCC	2 cut(s)	692, 1459
BtgI	CCRYGG	4 cut(s)	213, 1065, 1207, 1668
BtgZI	GCGATG	1 cut(s)	298
BtrI	CACGTC	1 cut(s)	274
BtsCI	GGATG	5 cut(s)	6, 128, 510, 1029, 1077
BtsI	GCAGTG	2 cut(s)	626, 683
BtsIMutI	CAGTG	4 cut(s)	482, 626, 683, 1429
BveI	ACCTGC	1 cut(s)	1189
Cac8I	GCNNGC	6 cut(s)	239, 796, 910, 914, 1363, 1549
CfoI	GCGC	6 cut(s)	160, 243, 380, 533, 597, 877
Cfr10I	RCCGGY	4 cut(s)	691, 877, 1394, 1628
Cfr13I	GGNCC	5 cut(s)	18, 57, 140, 728, 837
CseI	GACGC	4 cut(s)	138, 164, 479, 1036
Csp6I	GTAC	5 cut(s)	754, 1289, 1509, 1575, 1637
CviAII	CATG	9 cut(s)	757, 799, 865, 1066, 1078, 1358, 1475, 1669, 1699
CviQI	GTAC	5 cut(s)	754, 1289, 1509, 1575, 1637
DdeI	CTNAG	2 cut(s)	1281, 1652
DinI	GGCGCC	1 cut(s)	532
DpnI	GATC	8 cut(s)	251, 976, 1336, 1382, 1404, 1588, 1597, 1714
DpnII	GATC	8 cut(s)	249, 974, 1334, 1380, 1402, 1586, 1595, 1712
DrdI	GACNNNNNNGTC	1 cut(s)	622
DseDI	GACNNNNNNGTC	1 cut(s)	622
EaeI	YGGCCR	6 cut(s)	42, 450, 1329, 1396, 1614, 1641
EagI	CGGCCG	1 cut(s)	42
Eam1104I	CTCTTC	4 cut(s)	112, 209, 428, 1239
EarI	CTCTTC	4 cut(s)	112, 209, 428, 1239
Ecl136II	GAGCTC	1 cut(s)	916
EclXI	CGGCCG	1 cut(s)	42
Eco130I	CCWWGG	4 cut(s)	334, 1065, 1582, 1668
Eco24I	GRGCYC	1 cut(s)	918
Eco31I	GGTCTC	1 cut(s)	1087
Eco47I	GGWCC	1 cut(s)	57
Eco52I	CGGCCG	1 cut(s)	42
Eco53kI	GAGCTC	1 cut(s)	916
Eco57I	CTGAAG	1 cut(s)	590
Eco88I	CYCGRG	1 cut(s)	671
EcoICRI	GAGCTC	1 cut(s)	916
EcoO109I	RGGNCCY	1 cut(s)	57
EcoRII	CCWGG	3 cut(s)	513, 846, 1591
EcoT14I	CCWWGG	4 cut(s)	334, 1065, 1582, 1668
EcoT38I	GRGCYC	1 cut(s)	918
EgeI	GGCGCC	1 cut(s)	532
EheI	GGCGCC	1 cut(s)	532
ErhI	CCWWGG	4 cut(s)	334, 1065, 1582, 1668
FaeI	CATG	9 cut(s)	760, 802, 868, 1069, 1081, 1361, 1478, 1672, 1702
FaqI	GGGAC	3 cut(s)	70, 872, 1537
FatI	CATG	9 cut(s)	756, 798, 864, 1065, 1077, 1357, 1474, 1668, 1698
FauI	CCCGC	2 cut(s)	72, 440
FokI	GGATG	4 cut(s)	115, 497, 1036, 1084
FriOI	GRGCYC	1 cut(s)	918
FspBI	CTAG	1 cut(s)	1202
GlaI	GCGC	6 cut(s)	159, 242, 379, 532, 596, 876
HaeII	RGCGCY	2 cut(s)	534, 878
HgaI	GACGC	4 cut(s)	138, 164, 479, 1036
HhaI	GCGC	6 cut(s)	160, 243, 380, 533, 597, 877
Hin1I	GRCGYC	3 cut(s)	417, 471, 531
Hin1II	CATG	9 cut(s)	760, 802, 868, 1069, 1081, 1361, 1478, 1672, 1702
Hin6I	GCGC	6 cut(s)	158, 241, 378, 531, 595, 875
HinP1I	GCGC	6 cut(s)	158, 241, 378, 531, 595, 875
HincII	GTYRAC	1 cut(s)	280
HindII	GTYRAC	1 cut(s)	280
HphI	GGTGA	5 cut(s)	224, 815, 1070, 1581, 1691
Hpy166II	GTNNAC	2 cut(s)	280, 1192
Hpy188III	TCNNGA	7 cut(s)	132, 551, 644, 1106, 1130, 1690, 1743
Hpy8I	GTNNAC	2 cut(s)	280, 1192
HpyAV	CCTTC	5 cut(s)	239, 331, 376, 1020, 1459
HpyCH4III	ACNGT	5 cut(s)	83, 486, 938, 1433, 1513
HpyCH4IV	ACGT	3 cut(s)	273, 417, 702
HpyF3I	CTNAG	2 cut(s)	1281, 1652
HpySE526I	ACGT	3 cut(s)	273, 417, 702
Hsp92I	GRCGYC	3 cut(s)	417, 471, 531
Hsp92II	CATG	9 cut(s)	760, 802, 868, 1069, 1081, 1361, 1478, 1672, 1702
HspAI	GCGC	6 cut(s)	158, 241, 378, 531, 595, 875
KasI	GGCGCC	1 cut(s)	530
KflI	GGGWCCC	1 cut(s)	57
Kpn2I	TCCGGA	1 cut(s)	131
Kzo9I	GATC	8 cut(s)	249, 974, 1334, 1380, 1402, 1586, 1595, 1712
LmnI	GCTCC	2 cut(s)	273, 494
Lsp1109I	GCAGC	9 cut(s)	147, 153, 422, 425, 668, 1017, 1062, 1171, 1723
LweI	GCATC	4 cut(s)	107, 357, 1051, 1544
MaeI	CTAG	1 cut(s)	1202
MaeII	ACGT	3 cut(s)	273, 417, 702
MaeIII	GTNAC	4 cut(s)	304, 624, 1483, 1694
MalI	GATC	8 cut(s)	251, 976, 1336, 1382, 1404, 1588, 1597, 1714
MbiI	CCGCTC	2 cut(s)	268, 581
MboI	GATC	8 cut(s)	249, 974, 1334, 1380, 1402, 1586, 1595, 1712
MflI	RGATCY	4 cut(s)	249, 1334, 1402, 1712
MhlI	GDGCHC	2 cut(s)	491, 918
MlsI	TGGCCA	1 cut(s)	1616
MluCI	AATT	4 cut(s)	461, 720, 943, 1159
MluNI	TGGCCA	1 cut(s)	1616
Mly113I	GGCGCC	1 cut(s)	531
MlyI	GAGTC	6 cut(s)	656, 695, 836, 1238, 1519, 1702
MmeI	TCCRAC	4 cut(s)	62, 177, 676, 1495
Mox20I	TGGCCA	1 cut(s)	1616
MroI	TCCGGA	1 cut(s)	131
MscI	TGGCCA	1 cut(s)	1616
MseI	TTAA	3 cut(s)	48, 1044, 1553
MslI	CAYNNNNRTG	2 cut(s)	1070, 1502
Msp20I	TGGCCA	1 cut(s)	1616
MspA1I	CMGCKG	3 cut(s)	166, 237, 435
MspR9I	CCNGG	6 cut(s)	449, 515, 619, 727, 848, 1593
MvaI	CCWGG	3 cut(s)	515, 848, 1593
MvnI	CGCG	4 cut(s)	158, 243, 378, 597
NarI	GGCGCC	1 cut(s)	531
NciI	CCSGG	3 cut(s)	449, 619, 727
NcoI	CCATGG	2 cut(s)	1065, 1668
NdeII	GATC	8 cut(s)	249, 974, 1334, 1380, 1402, 1586, 1595, 1712
NlaIII	CATG	9 cut(s)	760, 802, 868, 1069, 1081, 1361, 1478, 1672, 1702
NlaIV	GGNNCC	6 cut(s)	20, 58, 59, 532, 762, 838
NmeAIII	GCCGAG	1 cut(s)	543
NmuCI	GTSAC	3 cut(s)	624, 1483, 1694
PcsI	WCGNNNNNNNCGW	3 cut(s)	399, 471, 651
PfeI	GAWTC	5 cut(s)	554, 589, 651, 709, 1198
PflFI	GACNNNGTC	1 cut(s)	356
PleI	GAGTC	6 cut(s)	656, 694, 836, 1237, 1519, 1701
PluTI	GGCGCC	1 cut(s)	534
PpsI	GAGTC	6 cut(s)	656, 694, 836, 1237, 1519, 1701
Ppu21I	YACGTR	1 cut(s)	703
PpuMI	RGGWCCY	1 cut(s)	57
Psp124BI	GAGCTC	1 cut(s)	918
Psp5II	RGGWCCY	1 cut(s)	57
Psp6I	CCWGG	3 cut(s)	513, 846, 1591
PspGI	CCWGG	3 cut(s)	513, 846, 1591
PspN4I	GGNNCC	6 cut(s)	20, 58, 59, 532, 762, 838
PspPI	GGNCC	5 cut(s)	18, 57, 140, 728, 837
PspPPI	RGGWCCY	1 cut(s)	57
PstI	CTGCAG	2 cut(s)	633, 1052
PsuI	RGATCY	4 cut(s)	249, 1334, 1402, 1712
PsyI	GACNNNGTC	1 cut(s)	356
RsaI	GTAC	5 cut(s)	755, 1290, 1510, 1576, 1638
RsaNI	GTAC	5 cut(s)	754, 1289, 1509, 1575, 1637
RseI	CAYNNNNRTG	2 cut(s)	1070, 1502
SacI	GAGCTC	1 cut(s)	918
SaqAI	TTAA	3 cut(s)	48, 1044, 1553
Sau3AI	GATC	8 cut(s)	249, 974, 1334, 1380, 1402, 1586, 1595, 1712
Sau96I	GGNCC	5 cut(s)	18, 57, 140, 728, 837
ScaI	AGTACT	1 cut(s)	1638
SchI	GAGTC	6 cut(s)	656, 695, 836, 1238, 1519, 1702
ScrFI	CCNGG	6 cut(s)	449, 515, 619, 727, 848, 1593
SduI	GDGCHC	2 cut(s)	491, 918
SfaNI	GCATC	4 cut(s)	107, 357, 1051, 1544
SfcI	CTRYAG	2 cut(s)	629, 1048
SfoI	GGCGCC	1 cut(s)	532
SgrAI	CRCCGGYG	1 cut(s)	877
SinI	GGWCC	1 cut(s)	57
SmiMI	CAYNNNNRTG	2 cut(s)	1070, 1502
SmlI	CTYRAG	1 cut(s)	1603
SmoI	CTYRAG	1 cut(s)	1603
Sse9I	AATT	4 cut(s)	461, 720, 943, 1159
SspDI	GGCGCC	1 cut(s)	530
SspI	AATATT	1 cut(s)	1444
SspMI	CTAG	1 cut(s)	1202
SstI	GAGCTC	1 cut(s)	918
StyD4I	CCNGG	6 cut(s)	447, 513, 617, 725, 846, 1591
StyI	CCWWGG	4 cut(s)	334, 1065, 1582, 1668
TaaI	ACNGT	5 cut(s)	83, 486, 938, 1433, 1513
TaiI	ACGT	3 cut(s)	276, 420, 705
TaqI	TCGA	9 cut(s)	85, 351, 402, 552, 557, 645, 654, 948, 982
TasI	AATT	4 cut(s)	461, 720, 943, 1159
TatI	WGTACW	2 cut(s)	753, 1636
TauI	GCSGC	7 cut(s)	141, 166, 268, 299, 584, 587, 1676
TfiI	GAWTC	5 cut(s)	554, 589, 651, 709, 1198
Tru1I	TTAA	3 cut(s)	48, 1044, 1553
Tru9I	TTAA	3 cut(s)	48, 1044, 1553
TscAI	CASTG	4 cut(s)	489, 633, 683, 1436
TseFI	GTSAC	3 cut(s)	624, 1483, 1694
TseI	GCWGC	9 cut(s)	160, 166, 435, 438, 681, 1030, 1050, 1184, 1736
Tsp45I	GTSAC	3 cut(s)	624, 1483, 1694
TspDTI	ATGAA	7 cut(s)	111, 313, 358, 815, 1088, 1463, 1715
TspGWI	ACGGA	4 cut(s)	202, 528, 663, 791
TspRI	CASTG	4 cut(s)	489, 633, 683, 1436
Tth111I	GACNNNGTC	1 cut(s)	356
VpaK11BI	GGWCC	1 cut(s)	57
XapI	RAATTY	1 cut(s)	461
XcmI	CCANNNNNNNNNTGG	2 cut(s)	877, 1589
XspI	CTAG	1 cut(s)	1202
ZraI	GACGTC	1 cut(s)	418
ZrmI	AGTACT	1 cut(s)	1638

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.